BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017196
(375 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077862|ref|XP_002305441.1| predicted protein [Populus trichocarpa]
gi|222848405|gb|EEE85952.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/378 (82%), Positives = 343/378 (90%), Gaps = 4/378 (1%)
Query: 1 MEEA----KKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
MEE+ + K++PVLPWMRSPVDVS FE+ PLD LPCLDPRLK+ALQNMG +LFPVQ+
Sbjct: 1 MEESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQI 60
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AVWQETIGPG FERDLCINSPTGSGKTL+YALPIVQ LS RAV+CLRALVVLPTRDLALQ
Sbjct: 61 AVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQ 120
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
VK VFAAIAPA+GLSVGLAVGQSSIADEISELIK+P+ EAGICYDP+DVLQELQS+VDIL
Sbjct: 121 VKQVFAAIAPAMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDIL 180
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRLMDHI T+GFTLEHLCYLVVDETDRLLRE+YQ+WLPTVL+LTR +E+
Sbjct: 181 VATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGV 240
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
+ FLP A GSLKTIRRCGVERGFK K YPRL KMVLSATLTQDP+KLAQL+LHHPLFLTT
Sbjct: 241 NNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTT 300
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
G+ RY+LPE+LESYKLIC SKLKPLYLVA+LQ LG EKCIVFTSSVESTHRLCTLLN FG
Sbjct: 301 GQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFG 360
Query: 357 ELRIKIKEYSGLQRQSVR 374
+L++KIKEYSGLQRQSVR
Sbjct: 361 DLKVKIKEYSGLQRQSVR 378
>gi|449433605|ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
gi|449490565|ref|XP_004158642.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
Length = 517
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 306/373 (82%), Positives = 337/373 (90%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
++ K+K +PVLPWMRSPVDVSL E+CPL+ LP LD RLK ALQNMGISSLFPVQ+AVWQE
Sbjct: 3 DKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQE 62
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
IGPG F+RDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRALVVLPTRDLALQVK+VF
Sbjct: 63 AIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
+AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP+D L ELQS+VDILVATPG
Sbjct: 123 SAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPG 182
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDHIN T+GFTL+HL YLV+DETDRLLREAYQ+WLPTVLQLT +D+ + + P
Sbjct: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISNP 242
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
+ GSLKTIRR GVERGFK KPYPRL KMVLSATLTQDP KLAQLDLHHPLFLTTG+ RY
Sbjct: 243 CSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRY 302
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
KLPE+LESY +ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC+LLN F +L +K
Sbjct: 303 KLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELK 362
Query: 362 IKEYSGLQRQSVR 374
IKEYSGLQRQS+R
Sbjct: 363 IKEYSGLQRQSLR 375
>gi|225443938|ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust.
Identities = 309/375 (82%), Positives = 341/375 (90%), Gaps = 1/375 (0%)
Query: 1 MEEAK-KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
M+EAK KK++PVLPWMRSP+DVSLFE+CPL PCLDPRL+VAL+NMG SSLFPVQVAVW
Sbjct: 1 MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW 60
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
QET+GPG FERDLCINSPTGSGKTL+YALPIV LS+RAV+CLRALVVLPTRDLALQVK+
Sbjct: 61 QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKE 120
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
VFAAIAPAVGLSVGLAVGQ+SIADEISELIKRPKLEAGICYDPED+ ELQS+VDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVAT 180
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRLMDHIN T+GFTL+HL YLVVDETDRLLREAYQ+WLPTVLQLTRS +E+ F T
Sbjct: 181 PGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTI 240
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
LPS FGS+ TIRRCGVERGFK + YPRLVK+VLSATLTQDP+KLA LDLHHPL LT G+
Sbjct: 241 LPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQR 300
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
RY+LPE+L+S+KLICESKLKPLYLVALL+ LG EKCIVFTSSVES HRLCTLLN FG+L+
Sbjct: 301 RYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQ 360
Query: 360 IKIKEYSGLQRQSVR 374
IKI EYSGLQ Q VR
Sbjct: 361 IKIGEYSGLQHQRVR 375
>gi|240255886|ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis thaliana]
Length = 522
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/373 (75%), Positives = 326/373 (87%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C LD LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLALQVKDVF
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAPAVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+P
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVP 244
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
SAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY
Sbjct: 245 SAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRY 304
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK
Sbjct: 305 RLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIK 364
Query: 362 IKEYSGLQRQSVR 374
KEYSG QS+R
Sbjct: 365 AKEYSGGLNQSLR 377
>gi|297804642|ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
gi|297316041|gb|EFH46464.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/373 (75%), Positives = 323/373 (86%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C L+ LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEIDSVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLALQVKDVF
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLALQVKDVF 124
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAP VGLSVG AVGQSSIA EIS+LIK PKL+AGICYDPED+ Q +SAVDILVATPG
Sbjct: 125 DAIAPTVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATPG 184
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ ++ F + F+P
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDGLFPSCTPFVP 244
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
SAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY
Sbjct: 245 SAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRY 304
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK
Sbjct: 305 RLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIK 364
Query: 362 IKEYSGLQRQSVR 374
KEYSG QSVR
Sbjct: 365 AKEYSGGLNQSVR 377
>gi|357491905|ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 497
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/375 (70%), Positives = 309/375 (82%), Gaps = 1/375 (0%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
M E K++S+P LPWMR PVDV+L + PL +P L P+LK AL++MGIS+LFPVQVAVW
Sbjct: 1 MGEEKQQSIPALPWMRDPVDVTLTQQLPLHSVPSLHPKLKSALEDMGISNLFPVQVAVWH 60
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
ET+GPG FERD+C+NSPTGSGKTL+YALP+VQ LS R +CLRALVV+PTRDLALQVK V
Sbjct: 61 ETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGRVTKCLRALVVVPTRDLALQVKQV 120
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-LQELQSAVDILVAT 179
F A+A +GL VGLAVGQSS+ADEISEL++ P + G CYDP + L QS VDILVAT
Sbjct: 121 FDAVASPLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVAT 180
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRLMDHIN T GFTLEHL YLVVDETDRLLREAYQ+WLPTVL+L +S+++ +++F
Sbjct: 181 PGRLMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASF 240
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
P + +L+T RRCGVERGFKDKPYPRL KMVLSATLTQDP +L QL+LHHPL L G+
Sbjct: 241 FPCSASALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQM 300
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
RY+LPE LESYKLICE K+KPLYL+ALL+SLGEEKC+VFT SV+STHRLC LLN F +LR
Sbjct: 301 RYRLPENLESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLR 360
Query: 360 IKIKEYSGLQRQSVR 374
I IKEYS LQ Q VR
Sbjct: 361 IDIKEYSSLQHQRVR 375
>gi|255584180|ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 469
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/378 (71%), Positives = 308/378 (81%), Gaps = 31/378 (8%)
Query: 1 MEEAK--KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
MEE+K KK++PVLPWMR PVD+ FE+C LD +PCLDPRLKVAL+NMG +SLF VQVAV
Sbjct: 1 MEESKLEKKNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAV 60
Query: 59 WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
WQETIGPG FERDLCIN+PTGSGKTL+YALPI+Q LS R+++CLRAL+VLPTRDLALQVK
Sbjct: 61 WQETIGPGNFERDLCINAPTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLALQVK 120
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV--LQELQSAVDIL 176
VFAA+APAVGLSVGLAVGQSSIA EISELIKRPKLEAGICYD +DV +QELQ++VDIL
Sbjct: 121 QVFAALAPAVGLSVGLAVGQSSIAGEISELIKRPKLEAGICYDRDDVILMQELQTSVDIL 180
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRLMDHI T+GFTLEHLCYL + ++ LTRS R
Sbjct: 181 VATPGRLMDHITNTKGFTLEHLCYLHLLDS-----------------LTRSTLLLR---- 219
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
FLP ++ VERGFK K YPRL KMVLSATLTQDP+KL QLDLHHPLFLTT
Sbjct: 220 --FLPIII----VLKDSSVERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTT 273
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
G++RY+LPE+LESY++ICE KLKPLYLVALLQ+L EKCIVF SSVESTHRLCTLL FG
Sbjct: 274 GQSRYQLPEKLESYRVICEPKLKPLYLVALLQNLVGEKCIVFASSVESTHRLCTLLKFFG 333
Query: 357 ELRIKIKEYSGLQRQSVR 374
+L++KIKEYSGLQ QSVR
Sbjct: 334 DLKVKIKEYSGLQHQSVR 351
>gi|5281020|emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
Length = 474
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/329 (78%), Positives = 292/329 (88%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
MGISSLFPVQVAVW ETIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRAL
Sbjct: 1 MGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRAL 60
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
VVLPTRDLALQVKDVF AIAPAVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+
Sbjct: 61 VVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDL 120
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT
Sbjct: 121 SQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLT 180
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
++ +++ F + F+PSAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL Q
Sbjct: 181 QTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQ 240
Query: 286 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 345
LDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T
Sbjct: 241 LDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETT 300
Query: 346 HRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
RLC LLN FG+ +IK KEYSG QS+R
Sbjct: 301 RRLCKLLNFFGDPKIKAKEYSGGLNQSLR 329
>gi|47497023|dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
Length = 517
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/368 (67%), Positives = 291/368 (79%), Gaps = 3/368 (0%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLALQVK+VF AIAP V
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 133
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
GLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+
Sbjct: 134 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 193
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSL 247
T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + + L
Sbjct: 194 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPL 251
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 307
TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L
Sbjct: 252 TTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKL 311
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 367
+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS
Sbjct: 312 QSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSR 371
Query: 368 LQRQSVRR 375
LQR+S RR
Sbjct: 372 LQRESTRR 379
>gi|115449213|ref|NP_001048386.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|122170850|sp|Q0DWT8.1|RH1_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|113537917|dbj|BAF10300.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|215740532|dbj|BAG97188.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 521
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/368 (67%), Positives = 291/368 (79%), Gaps = 3/368 (0%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 18 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLALQVK+VF AIAP V
Sbjct: 78 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 137
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
GLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+
Sbjct: 138 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 197
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSL 247
T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + + L
Sbjct: 198 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPL 255
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 307
TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L
Sbjct: 256 TTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKL 315
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 367
+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS
Sbjct: 316 QSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSR 375
Query: 368 LQRQSVRR 375
LQR+S RR
Sbjct: 376 LQRESTRR 383
>gi|357137417|ref|XP_003570297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Brachypodium
distachyon]
Length = 522
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/377 (67%), Positives = 288/377 (76%), Gaps = 7/377 (1%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E +P LPWMR PVD+ F CP+ LP LDPRL A+Q MGI S F VQVA W E
Sbjct: 12 DEGPSSRVPHLPWMRYPVDIDGFSGCPVARLPRLDPRLAEAVQRMGIESFFSVQVATWLE 71
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ LS R VRCLRALVVLPTRDLALQVK+VF
Sbjct: 72 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKEVF 131
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAP VGLSV AVGQSSIADEIS+LIK+ K E D E V E Q+ VDILVATPG
Sbjct: 132 DAIAPVVGLSVASAVGQSSIADEISDLIKKSKQELYATLDEEYVEMEPQTKVDILVATPG 191
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN---RFSDAST 238
RLMDHIN T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+Q TRS N+N R + T
Sbjct: 192 RLMDHINMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQFTRSTNQNHPWRDTAGQT 251
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
L L T RR GVERGFK K YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+
Sbjct: 252 LL----HPLTTNRRSGVERGFKGKCYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGK 307
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
RY++P +LESYKLIC + LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L
Sbjct: 308 KRYRIPTKLESYKLICTTNLKPLCLIVLLQELHGEKCLVFTSSVESSHRLSTLLGFFEDL 367
Query: 359 RIKIKEYSGLQRQSVRR 375
K E+S LQR+S RR
Sbjct: 368 PFKFSEFSRLQRESTRR 384
>gi|242066828|ref|XP_002454703.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
gi|241934534|gb|EES07679.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
Length = 519
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/377 (67%), Positives = 286/377 (75%), Gaps = 7/377 (1%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE +P LPWMR PVD+ F CP+ LP LDPRL ALQ MGI S FPVQ A W E
Sbjct: 10 EEGPADRVPHLPWMRCPVDIDTFSGCPVTQLPRLDPRLAEALQRMGIESFFPVQEAAWLE 69
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRALVVLPTRDLALQVK+VF
Sbjct: 70 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLCKRKVRCLRALVVLPTRDLALQVKEVF 129
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAP VGLSVG AVGQSSIADE+S L+++PK E D E V E Q+ +DILVATPG
Sbjct: 130 DAIAPVVGLSVGSAVGQSSIADEVSRLVQKPKQEFYPTIDEEYVQMEPQTKIDILVATPG 189
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDAST 238
RLMDHIN T GF+LEHL YLV+DETDR+LREAYQ+WLPTV+QLT S D+ D T
Sbjct: 190 RLMDHINMTNGFSLEHLQYLVIDETDRMLREAYQSWLPTVIQLTHSIGQDHSWHDIDGKT 249
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
L L TIRR GVERGFK K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+
Sbjct: 250 LL----HPLTTIRRSGVERGFKGKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGK 305
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
RY++P +LESYKLIC+S LKPL L+ LLQ L KC+VFTSSVES+HRL TLL F L
Sbjct: 306 KRYRIPTKLESYKLICKSNLKPLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLCFFENL 365
Query: 359 RIKIKEYSGLQRQSVRR 375
K EYS LQR+S RR
Sbjct: 366 PFKFSEYSRLQRESTRR 382
>gi|413939310|gb|AFW73861.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
1 [Zea mays]
gi|413939311|gb|AFW73862.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
2 [Zea mays]
Length = 523
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/377 (66%), Positives = 285/377 (75%), Gaps = 7/377 (1%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE +P LPWMR PVD+ F P+ LP LDPRL ALQ MGI S FPVQ A W E
Sbjct: 10 EEGPADRVPHLPWMRYPVDIDTFSGRPVTQLPRLDPRLVEALQRMGIESFFPVQEAAWLE 69
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRALVVLPTRDLALQVK+VF
Sbjct: 70 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLCTRKVRCLRALVVLPTRDLALQVKEVF 129
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAP VGLSVG AVGQSSIADE+S L+++P+ E D E V E ++ +DILVATPG
Sbjct: 130 DAIAPVVGLSVGSAVGQSSIADEVSSLVQKPRQEFYPTIDKEYVQMEPRTKIDILVATPG 189
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDAST 238
RLMDHIN T GF+LEHL YLV+DETDR+LREAYQ+WLPTV+QLT S D+ D T
Sbjct: 190 RLMDHINMTNGFSLEHLQYLVIDETDRMLREAYQSWLPTVIQLTHSIGQDHSCHDIDGKT 249
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
L L TIRR GVERGFK K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+
Sbjct: 250 LL----HPLTTIRRSGVERGFKSKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGK 305
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
RY++P +LESYKLIC+S LKPL L+ LLQ L KC+VFTSSVES+HRL TLL F L
Sbjct: 306 KRYRIPTKLESYKLICKSNLKPLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLRFFENL 365
Query: 359 RIKIKEYSGLQRQSVRR 375
K EYS LQR+S RR
Sbjct: 366 PFKFSEYSRLQRESTRR 382
>gi|125584003|gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japonica Group]
Length = 499
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/367 (65%), Positives = 281/367 (76%), Gaps = 19/367 (5%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLALQVK+VF AIAP V
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 133
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
GLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+
Sbjct: 134 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 193
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N
Sbjct: 194 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQN----------------- 236
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+
Sbjct: 237 --HSWGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQ 294
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 368
SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS L
Sbjct: 295 SYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRL 354
Query: 369 QRQSVRR 375
QR+S RR
Sbjct: 355 QRESTRR 361
>gi|125541460|gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indica Group]
Length = 499
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/367 (65%), Positives = 281/367 (76%), Gaps = 19/367 (5%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLALQVK+VF AIAP V
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 133
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
GLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+
Sbjct: 134 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 193
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N
Sbjct: 194 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQN----------------- 236
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+
Sbjct: 237 --HSWGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQ 294
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 368
SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS L
Sbjct: 295 SYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRL 354
Query: 369 QRQSVRR 375
QR+S RR
Sbjct: 355 QRESTRR 361
>gi|3445416|emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana]
Length = 450
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/305 (76%), Positives = 268/305 (87%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLALQVKDVF AIAPAVG
Sbjct: 1 RDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVG 60
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
LSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN
Sbjct: 61 LSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINN 120
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T
Sbjct: 121 TKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQT 180
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE
Sbjct: 181 VRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLEC 240
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 369
+LICE+ +KP+YL ALL+S EKCI+FTSS E+T RLC LLN FG+ +IK KEYSG
Sbjct: 241 LRLICETGMKPVYLGALLKSWEGEKCIIFTSSGETTRRLCKLLNFFGDPKIKAKEYSGGL 300
Query: 370 RQSVR 374
QS+R
Sbjct: 301 NQSLR 305
>gi|326532600|dbj|BAK05229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/354 (67%), Positives = 277/354 (78%), Gaps = 1/354 (0%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+EA ++ +P LPWMR PVD+ F CP+ LP LDPRL ALQ MGI S FPVQV+ W E
Sbjct: 11 DEAPEERVPHLPWMRHPVDIDSFSACPVASLPRLDPRLAEALQRMGIESFFPVQVSAWLE 70
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG F+RD+CINSPTGSGKTL+YALPIVQ LS R VRCLRALVVLPTRDLALQVK+VF
Sbjct: 71 TIGPGAFQRDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKEVF 130
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAP VGL+V AVGQSSIADEIS+LIK+ K E D E V E Q+ VDILVATPG
Sbjct: 131 DAIAPVVGLTVASAVGQSSIADEISDLIKKSKQELYPSLDDEYVEMEPQTKVDILVATPG 190
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDHIN T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+Q TR ++ F +T
Sbjct: 191 RLMDHINMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQFTRPTKQDLFRHDTTGR- 249
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
+ L TIRR GVERGFK K YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+ RY
Sbjct: 250 TLLHPLTTIRRSGVERGFKGKCYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGKKRY 309
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++PE+LESYKLIC S +KPL L+ LLQ L EKC+VFT SV+ +HRL TLL F
Sbjct: 310 RIPEKLESYKLICTSNIKPLCLIVLLQELRGEKCLVFTKSVDDSHRLSTLLGFF 363
>gi|302794133|ref|XP_002978831.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
gi|300153640|gb|EFJ20278.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
Length = 513
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 269/374 (71%), Gaps = 13/374 (3%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVL WMR P+DV+ FE+ LD +P L P L +L+N+GI SLFPVQ AVW ET+GPG
Sbjct: 3 KAPPVLQWMRQPLDVNSFEEQSLDSVPFLHPGLMESLRNVGIHSLFPVQAAVWHETVGPG 62
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
RDL I+SPTGSGKTL+Y+LPI Q+LS +R LRAL+V+PTRDLA+QVK VF AIAP
Sbjct: 63 GGARDLSISSPTGSGKTLAYSLPIAQSLSQCLLRRLRALIVVPTRDLAMQVKQVFDAIAP 122
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGR 182
+VGLSVG+AVGQ+S+A E S+L+ P + C+ D L E S VDILVATPGR
Sbjct: 123 SVGLSVGIAVGQTSVAAEASQLVLFPG-KIDTCFRELHLASDNLAE--SRVDILVATPGR 179
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
LMDHI T GFTLEHL YLVVDETDRLLREAYQ WLPTVL+ + N FS + P
Sbjct: 180 LMDHIQNTPGFTLEHLQYLVVDETDRLLREAYQEWLPTVLEAASAKN---FSPSDDSNP- 235
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETR 300
GS++TIRR +ERG K PRL K+++SATLT+DP K+AQL L+HPL L+T +
Sbjct: 236 GIGSVRTIRRSCLERGIKGCVVPRLQKIIVSATLTRDPAKIAQLRLYHPLSVALSTSDNL 295
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360
YKLPE+L SY +IC+++ KPL LV LL SLG+++ ++FTSSV +THRL T L F +L
Sbjct: 296 YKLPEQLRSYTIICKAQQKPLKLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPF 355
Query: 361 KIKEYSGLQRQSVR 374
+ EYS Q Q R
Sbjct: 356 RAVEYSSFQHQLAR 369
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/367 (60%), Positives = 259/367 (70%), Gaps = 47/367 (12%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETIGPGLFE 69
VLPWMR PVD++ + P+ +P + RL+ L+ NMGIS LFPVQVA+WQET+GPG FE
Sbjct: 166 VLPWMRHPVDITRCPELPVCSVPLMKRRLQSVLEENMGISKLFPVQVALWQETVGPGDFE 225
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RDLCINSPTGSGKTL+YALPIVQ L LRALVV+PTRDLALQVK VF A+A +G
Sbjct: 226 RDLCINSPTGSGKTLAYALPIVQNLFTNPGGRLRALVVVPTRDLALQVKRVFDALASPLG 285
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHI 187
L +GLA GQSS+ E+S LI P + G DP L L QS VDILVATPGRL+DH+
Sbjct: 286 LRIGLAAGQSSLRHELSSLIYLPGEDDGP--DP-GFLSPLWFQSKVDILVATPGRLVDHV 342
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 247
N +L+HL YLVVDE DRLLRE YQ+WLPTVL+LT+S
Sbjct: 343 NK---LSLKHLRYLVVDEADRLLREDYQSWLPTVLKLTQS-------------------- 379
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 307
RL K+VLSATLT+DP +LAQL+LHHPLFL+ G+ RY+LPE L
Sbjct: 380 ------------------RLAKIVLSATLTRDPGRLAQLNLHHPLFLSAGKMRYRLPEYL 421
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 367
E YKLICE K+KPLYLVALL+SLGEEKCIVFT SVESTH LC LLN FG+L+I IKE+SG
Sbjct: 422 ECYKLICERKVKPLYLVALLKSLGEEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKEFSG 481
Query: 368 LQRQSVR 374
L+ Q VR
Sbjct: 482 LKHQRVR 488
>gi|302787757|ref|XP_002975648.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
gi|300156649|gb|EFJ23277.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
Length = 513
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 268/374 (71%), Gaps = 13/374 (3%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVL WMR P+DV FE+ LD +P L P L +L+N+GI SLFPVQ AVW ET+GPG
Sbjct: 3 KAPPVLQWMRQPLDVKSFEEQSLDSVPFLHPGLMESLRNVGIHSLFPVQAAVWHETVGPG 62
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
RDL I+SPTGSGKTL+Y+LPI Q+LS R +R LRAL+V+PTRDLA+QVK VF AIAP
Sbjct: 63 GGARDLSISSPTGSGKTLAYSLPIAQSLSQRLLRRLRALIVVPTRDLAMQVKQVFDAIAP 122
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGR 182
+VGLS+G+AVGQ+S+A E S+L+ P + C+ D L E S VDILVATPGR
Sbjct: 123 SVGLSIGIAVGQTSVAAEASQLVLFPG-KTDTCFRELHLASDNLPE--SRVDILVATPGR 179
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
LMDHI T GFTLEHL YLVVDETDRLLREAYQ WLPTVL+ N FS + P
Sbjct: 180 LMDHIQNTPGFTLEHLQYLVVDETDRLLREAYQEWLPTVLEAATGKN---FSPSDDSNP- 235
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETR 300
GS++TIRR +ERG K PRL K+++SATLT+DP K+AQL L+HPL L+T +
Sbjct: 236 GIGSVRTIRRSCLERGIKGCVVPRLQKIIVSATLTRDPAKIAQLGLYHPLSIALSTSDNL 295
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360
YKLPE+L SY +IC+++ KPL LV LL SLG+++ ++FTSSV +THRL T L F +L
Sbjct: 296 YKLPEQLRSYTIICKAQQKPLKLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPF 355
Query: 361 KIKEYSGLQRQSVR 374
+ EYS Q Q R
Sbjct: 356 RAVEYSSFQHQLAR 369
>gi|356554241|ref|XP_003545457.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 333
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/373 (56%), Positives = 255/373 (68%), Gaps = 47/373 (12%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQ 60
EE ++ S+ VLPWMR PVD++ +++ P+ +P + RL+ L+ NMGIS LFPVQV +W
Sbjct: 3 EEKQQPSVVVLPWMRHPVDITRYQELPICSVPLMKRRLQSVLEKNMGISKLFPVQVTLWX 62
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
ET+GPG FERDLCI P SGKTL+YA PIVQ LS LRALVV+PTRDL+LQVK V
Sbjct: 63 ETVGPGDFERDLCIKLPIESGKTLAYAFPIVQNLSTDTGGRLRALVVVPTRDLSLQVKRV 122
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVA 178
F A+A +GL + LA QSS+ ++S LI P + G DP L L QS VDILV
Sbjct: 123 FDALASLLGLRICLATDQSSLRHKLSSLIYLPGEDDG--QDP-GFLSSLWFQSKVDILVV 179
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+N +L+HL YL+VDE DRLLRE YQ+WLPTVL+LT+S
Sbjct: 180 TPGRLVDHVNK---LSLKHLRYLMVDEADRLLREDYQSWLPTVLKLTQS----------- 225
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
RL K+VLSATLT+DP +LAQL+LHHPLFL+TG+
Sbjct: 226 ---------------------------RLTKIVLSATLTRDPGRLAQLNLHHPLFLSTGK 258
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
RY+LPE LE YKLICE K+KPLYLVALL+SLGEE CIVFT SVESTH LC LLN FG+L
Sbjct: 259 MRYRLPEYLECYKLICERKVKPLYLVALLKSLGEENCIVFTRSVESTHHLCKLLNCFGDL 318
Query: 359 RIKIKEYSGLQRQ 371
+I IKE+S L+ Q
Sbjct: 319 KIGIKEFSSLKHQ 331
>gi|168044025|ref|XP_001774483.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674195|gb|EDQ60707.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 462
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/377 (54%), Positives = 263/377 (69%), Gaps = 11/377 (2%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K P LPWMRSPV++++ + +D +P LD RL+ AL+ GI +LFPVQVAVW + +GPG
Sbjct: 14 KGPPALPWMRSPVEIAIHDPLSVDEVPLLDSRLQEALRKAGIEALFPVQVAVWNQVLGPG 73
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
ERDLC+ SPTGSGKTLS+ALPIVQ LS R +R LRALVVLPTRDLA+QVK VF +AP
Sbjct: 74 GRERDLCVCSPTGSGKTLSFALPIVQLLSTRVLRRLRALVVLPTRDLAVQVKSVFDILAP 133
Query: 127 AVGLSVGLAVGQSSIADEISELIK-RPKLEAGI-CYDPEDVLQELQSAVDILVATPGRLM 184
AVGLSVG+ VGQS++A E+ EL+K R +L Y+ + +S +DILVATPGRLM
Sbjct: 134 AVGLSVGI-VGQSTVAAEVGELVKTRSRLVHSFETYEAVENNLVYESCIDILVATPGRLM 192
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
DH+ T GFT+EHL YLVVDETDRLLR+ YQ+WLP VL + + RF D S
Sbjct: 193 DHLKNTPGFTVEHLQYLVVDETDRLLRQDYQSWLPNVLNVIQI--PERFDDVSRRKAQCL 250
Query: 245 ---GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--TTGET 299
G T RR +ERG K + +PR++K +LSATLT+DP K+AQLDL+ PL+L + E+
Sbjct: 251 RGTGVAFTQRRWCLERGSKGRVHPRVMKFLLSATLTKDPAKIAQLDLYWPLYLAPSAEES 310
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-GEL 358
RY LP++L+++KLI + KPL LVALL+ + I+F +SVE+TH+L LL HF
Sbjct: 311 RYHLPKQLKAFKLITRASKKPLVLVALLEQFKNQSTIIFNASVEATHQLFLLLRHFYAGQ 370
Query: 359 RIKIKEYSGLQRQSVRR 375
+ EYS Q Q +RR
Sbjct: 371 EFSVVEYSSRQPQHIRR 387
>gi|356528222|ref|XP_003532704.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 341
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/373 (55%), Positives = 254/373 (68%), Gaps = 47/373 (12%)
Query: 5 KKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETI 63
++ S+ +LPWM PVD++ ++ P+ +P ++ RL+ L+ NMGIS LF VQVA+WQET+
Sbjct: 2 EQPSVAILPWMHHPVDITRCQELPVCSVPLMERRLQSVLEENMGISKLFSVQVALWQETV 61
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
G FERDLCINSPT SGKTL+YALPIVQ LS L ALVV+PTRDLALQVK VF A
Sbjct: 62 GSDDFERDLCINSPTESGKTLAYALPIVQNLSTNTSDRLFALVVVPTRDLALQVKRVFDA 121
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPG 181
+A ++GL +GLA GQSS+ E+S LI P + G DP L L QS V+ILVATPG
Sbjct: 122 LASSLGLHIGLAAGQSSLRHELSSLIYLPGEDDGP--DP-GFLSPLWFQSKVNILVATPG 178
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDH+N +L+HL YLVVDE DRLLRE YQ+WLPTVL+LT+
Sbjct: 179 RLMDHVNK---LSLKHLRYLVVDEADRLLREDYQSWLPTVLKLTQF-------------- 221
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
RL K+VLS LT DP +LA L+LHHPLFL+ G+ RY
Sbjct: 222 ------------------------RLAKIVLSVILTLDPGRLAXLNLHHPLFLSAGKMRY 257
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
+L E LE +KLICE K+KPLYLV LL+SLG+EKCIVFT SVESTH LC LLN FG+L+I
Sbjct: 258 RLLEYLECFKLICERKVKPLYLVTLLKSLGKEKCIVFTRSVESTHHLCKLLNCFGDLKIG 317
Query: 362 IKEYSGLQRQSVR 374
IKE+SGL+ Q V+
Sbjct: 318 IKEFSGLKHQLVQ 330
>gi|356554249|ref|XP_003545461.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 492
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/367 (54%), Positives = 246/367 (67%), Gaps = 47/367 (12%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETIGPGLFE 69
VLPWMR PVD++ ++ P+ +P + RL++ L+ NMGIS LFPV V +WQET+GP FE
Sbjct: 41 VLPWMRHPVDITRCQELPVCSVPLMKWRLQLVLEVNMGISKLFPVXVTLWQETVGPSDFE 100
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RDLCINSPTG GKTL+YALP++Q L CLRALVV+PT D ALQVK VF A+A +G
Sbjct: 101 RDLCINSPTGRGKTLAYALPLIQNLFTDPGGCLRALVVVPTHDFALQVKRVFDALASLLG 160
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHI 187
L +GLA GQSS+ E S LI P+ + G +P L L QS V+ILVAT GRL+DH+
Sbjct: 161 LRIGLAAGQSSLRHEFSSLIFLPREDDGP--NP-GFLSSLWFQSKVNILVATLGRLVDHV 217
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 247
N +L+HL YLVVDE DR L E YQ+WLPTV++LT+ FG
Sbjct: 218 NK---LSLKHLRYLVVDEADRFLHEDYQSWLPTVIKLTQ-----------------FG-- 255
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 307
L K+VL A LT+ P +LAQL LH+ LFL+ G+ Y+LPE L
Sbjct: 256 -------------------LAKIVLFAMLTRGPGRLAQLILHYLLFLSAGKMCYRLPEYL 296
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 367
E YKLICE K+KPLYLVALL+SLGEEKCIVFT VESTH LC LLN FG+L+I IKE+SG
Sbjct: 297 ECYKLICERKVKPLYLVALLKSLGEEKCIVFTRFVESTHHLCKLLNFFGDLKIGIKEFSG 356
Query: 368 LQRQSVR 374
L+ Q VR
Sbjct: 357 LKHQQVR 363
>gi|2326341|emb|CAA72069.1| RH1 protein [Arabidopsis thaliana]
Length = 244
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/195 (72%), Positives = 168/195 (86%)
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F
Sbjct: 1 PGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPF 60
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
+PSAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +
Sbjct: 61 VPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGS 120
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
RY+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +
Sbjct: 121 RYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPK 180
Query: 360 IKIKEYSGLQRQSVR 374
IK KEYSG QS+R
Sbjct: 181 IKAKEYSGGLNQSLR 195
>gi|384254028|gb|EIE27502.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 562
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 218/394 (55%), Gaps = 61/394 (15%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI 63
A K+ PVLPWMR P+ + + PL+ + LD RL+ AL+ G LFPVQ A WQ T
Sbjct: 80 ADGKNQPVLPWMRLPIKIEAGQGVPLEDVRGLDSRLQDALKACGFVELFPVQAAAWQVTA 139
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
G DLCI++PTGSGKTL+YALPI+Q L R V LR LVVLPTRDLA QV VFA
Sbjct: 140 GGHSAAHDLCISAPTGSGKTLAYALPILQGLLGRCVPRLRCLVVLPTRDLAAQVFKVFAD 199
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ-----------SA 172
+ P +GL VG+A Q+S+ E + L D +++ Q SA
Sbjct: 200 LCPPLGLRVGMAAAQTSVGTEAATLFP-------------DAIRDQQSIRGMAAVSNSSA 246
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
VDILVATPGRLM H+ T G TL L YLV+DETDRLLR+AYQ WLP V T +
Sbjct: 247 VDILVATPGRLMAHLKGTPGATLNDLRYLVIDETDRLLRQAYQDWLPFVTAATVGGPGD- 305
Query: 233 FSDASTFLPSAFGSLKTIRRCGVE--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
+R G + RG P ++K+V SATLT+DP+K+ +L L+
Sbjct: 306 ---------------PPVRGPGGQPVRG----PQRHVLKIVASATLTRDPSKIERLGLNC 346
Query: 291 PLFLTTGET---------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
P ++ G + Y +P+ L+ +K++C KP+ VALL+ L E
Sbjct: 347 PRYIALGASDHRHATILHLLSHAREYAMPKSLKEFKVVCAGADKPVLAVALLRQLANEPT 406
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 369
++FT+SVE+T RL LL+ LR + E+S L
Sbjct: 407 LIFTASVEATRRLFVLLHAVPSLRESVLEFSSLN 440
>gi|302839717|ref|XP_002951415.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
gi|300263390|gb|EFJ47591.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
Length = 654
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 225/385 (58%), Gaps = 24/385 (6%)
Query: 3 EAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQN-MGISSLFPVQVAVWQE 61
E + PVLPWM P+ + P++ + LD RL L+N G LFPVQ AVWQ
Sbjct: 24 ETSGGAGPVLPWMCVPLTIESGSGIPVEKVLGLDARLASQLRNGFGFPELFPVQTAVWQH 83
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
+ G DLC+ +PTGSGKTL+YALP+V +L++ V CLRALVVLPTRDLA+QV DVF
Sbjct: 84 SAGGTSTAHDLCVAAPTGSGKTLAYALPVVNSLAD--VGCLRALVVLPTRDLAVQVYDVF 141
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG----ICYDPEDVLQELQSAVDILV 177
+ AV L+V LA ++S A E + ++ P + + + D+LV
Sbjct: 142 RPLCDAVQLNVALAAARTSEAAEAAAIVGLPASSSSSSPFVAGGGSAAAPGCRRGADVLV 201
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRLM H++ + G +L HL +LV DETDRLLR++YQ+WLP +L + + + +
Sbjct: 202 ATPGRLMSHLSGSPGVSLRHLRFLVADETDRLLRQSYQSWLP---RLPEAVPKPKLHISP 258
Query: 238 TFLPSAFGSL-KTIRRCGVERGFKDKPYP--RLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+ P FGSL + RR + + + R+VK+V+SATLT+DP KL +L LHHP F+
Sbjct: 259 SDSPILFGSLPRHARRSASSQTYIPCTHVMCRVVKIVVSATLTRDPAKLQRLALHHPRFV 318
Query: 295 -----------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 343
RY LP L Y+L+C + KPL L+ALLQ + IVFTSS+E
Sbjct: 319 ATATAAGGGGGGAAAGRYSLPRSLSEYRLMCSAARKPLVLLALLQEWSGQSTIVFTSSLE 378
Query: 344 STHRLCTLLNHFGELRIKIKEYSGL 368
TH+L +L+ +L ++ EYS L
Sbjct: 379 MTHKLFLMLSAVQDLPDEVVEYSSL 403
>gi|294464732|gb|ADE77873.1| unknown [Picea sitchensis]
Length = 230
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 171/224 (76%), Gaps = 5/224 (2%)
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
LS R ++ LRALVVLPTRDLA+QVK VF AIAPAVGLSVGLAVGQ+S+A + ++ I+ +
Sbjct: 2 LSRRTLQYLRALVVLPTRDLAIQVKTVFDAIAPAVGLSVGLAVGQTSVAADTAQFIRHRR 61
Query: 154 LEAGICYDPEDV-LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
DP+ + + +S+VDIL+ATPGRLMDHI++TRGFTLEHLCYLVVDETDRLLRE
Sbjct: 62 NSMQNLSDPKGMEMSTSESSVDILIATPGRLMDHISSTRGFTLEHLCYLVVDETDRLLRE 121
Query: 213 AYQAWLPTVLQLTRSD-NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
AYQ WLP VL +S+ +ENR + S+ + + G + T RR + RGFK K PR++KM+
Sbjct: 122 AYQYWLPNVLSTAQSNHHENRGATWSS-VSARLGPITTFRRDVLGRGFKTKTDPRVMKMI 180
Query: 272 LSATLTQDPNKLAQLDLHHPLFL--TTGETRYKLPERLESYKLI 313
LSATLT+DP+KL+QL LH PLFL T E RYKLPE+LE Y L+
Sbjct: 181 LSATLTRDPSKLSQLALHQPLFLASTGAEKRYKLPEQLEIYTLV 224
>gi|384494370|gb|EIE84861.1| hypothetical protein RO3G_09571 [Rhizopus delemar RA 99-880]
Length = 483
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 219/400 (54%), Gaps = 47/400 (11%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-----QE 61
K+M V W+ P VS + C LD + L P L +++G+SSLF VQ+AV +
Sbjct: 17 KNMGVPDWLLHPTVVSPKDTCELDQV-GLSPWLVQRCKDIGLSSLFAVQMAVIPVFLRHK 75
Query: 62 TIGPGL-FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
T+ + DLCI++PTGSGKT++YALPIV LS R V+ LRA+VVLPTRDL +QVK+
Sbjct: 76 TLYDTIKVSGDLCISAPTGSGKTMAYALPIVDILSKRVVKRLRAVVVLPTRDLVVQVKET 135
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A L V GQ S E L+ + E+ +S VDIL+ATP
Sbjct: 136 FDAFVKGTDLVVAAVSGQQSFTHEQHVLVG----------NEEESYPGGKSRVDILIATP 185
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA---- 236
GRL+DH+N+T FTL+H+ +LV+DE DRLL +++ WL +L T N +DA
Sbjct: 186 GRLIDHLNSTPNFTLQHVRFLVIDEADRLLNQSFNDWLNRILLAT---NPVVNADAPLLG 242
Query: 237 ------STFLPSAFGSLKTIRRCGVERGFKDKPYPR---LVKMVLSATLTQDPNKLAQLD 287
LP A T + + D P+ + K++ SATLT++P K+A L
Sbjct: 243 FKTDKNGITLPDAIAP--TFLQSHYKLPVTDLDIPKAPFIQKLLFSATLTKNPAKIAGLH 300
Query: 288 LHHPLFLTT-------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
L+ P +++ + Y PE L+ Y +I ++ KPL ++ LL LG + + FT
Sbjct: 301 LNEPEYISVQHEDEDHAQREYTTPEGLKEYMIIVSTEKKPLTVIYLLHQLGVKSGLCFTK 360
Query: 341 SVESTHRLCTLLNHFGEL-----RIKIKEYSGLQRQSVRR 375
SVEST RL TL+N + L RIK+KEYS R + R+
Sbjct: 361 SVESTERLQTLINAYEALQPEEKRIKVKEYSSELRPTERK 400
>gi|395332279|gb|EJF64658.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 694
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 196/373 (52%), Gaps = 59/373 (15%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGS 80
D L R++ LQ++GI+ LF VQ AV + P DLC+++PTGS
Sbjct: 190 DERTGLSGRMRRRLQDLGITELFAVQTAVVPLLLSSPRSRALYRPYDPPEDLCVSAPTGS 249
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKTL+Y LPIV+ LS+R V LRALVVLPTRDL LQV++ F AIA GL +G A GQ S
Sbjct: 250 GKTLAYVLPIVEILSSRVVTRLRALVVLPTRDLVLQVRETFEAIAKGRGLKIGTATGQHS 309
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
A E ++L+ E LQ S VDIL+ TPGRL+DH+N T F+L+HL +
Sbjct: 310 FAHEQAQLVAERNEE----------LQGGSSKVDILICTPGRLIDHLNGTPNFSLQHLRF 359
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS---------------------TF 239
LV+DE DRLL +++Q WL VL TR + S AS +
Sbjct: 360 LVIDEADRLLAQSFQDWLAQVLAATRPPRASDDSGASLSSELTTASINLAARGRPHPDSL 419
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL----- 294
P+ L+ + V + +K P K++ SATLT+DP K+A L L P ++
Sbjct: 420 SPTFLHLLRGVHY--VRTDYDEKKEPSCQKLLFSATLTRDPAKIAALGLRQPKYVVVQSP 477
Query: 295 -TTGET-----------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 342
T+ + ++ +P L + ++CES +KPL L L+ + G +VFT S
Sbjct: 478 KTSAASKEEGVLDFVMEKFTMPATLTEHMVVCESSVKPLMLFHLVHARGVTNALVFTKSA 537
Query: 343 ESTHRLCTLLNHF 355
EST RL L F
Sbjct: 538 ESTARLVRLFEFF 550
>gi|392564142|gb|EIW57320.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 682
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 199/372 (53%), Gaps = 54/372 (14%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAV----WQETIGPGLFE-----RDLCINSPTGS 80
D L +++ LQ +GI+ LF VQ AV T L+ DLC+++PTGS
Sbjct: 182 DERTGLSGKMRKRLQELGIAELFAVQTAVVPLLLSSTRAQSLYRPYDPPEDLCVSAPTGS 241
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKTL+Y LPIV+ LS R V LRAL+VLPTRDL +QV++ F A+A GL +G A GQ S
Sbjct: 242 GKTLAYVLPIVEVLSARIVTRLRALIVLPTRDLVVQVRETFEAVAKGRGLKIGTATGQHS 301
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
A E S+L+ E G LQ S VD+L+ TPGRLMDHI T F+L+HL +
Sbjct: 302 FAHEQSQLV----AERG------SDLQGGSSKVDVLICTPGRLMDHITGTPNFSLQHLRF 351
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTR--SDNENRFSDAST------------FLPSAFGS 246
LV+DE DRLL +++Q WL VL +TR +++ S+AST L AF
Sbjct: 352 LVIDEADRLLAQSFQDWLAQVLAVTRPPRPSDDTRSEASTPPSHTTPRPHPDALAPAF-- 409
Query: 247 LKTIRRCGVER-GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---------TT 296
L +R R ++ P K++ SATLT+DP K+A L L P ++ T
Sbjct: 410 LHLLRGAPYTRTDIDERKEPSCQKLLFSATLTRDPAKIAALGLRAPRYIVVQGRKSAAAT 469
Query: 297 GE--------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 348
E ++ +P L + L+CES KPL L ++ + G +VFT S ES RL
Sbjct: 470 KEEGVLDFVMEKFTMPATLTEHMLVCESAAKPLMLFHMVHARGVTNALVFTKSAESATRL 529
Query: 349 CTLLNHF-GELR 359
L F G LR
Sbjct: 530 VRLFEFFEGALR 541
>gi|449543170|gb|EMD34147.1| hypothetical protein CERSUDRAFT_125827 [Ceriporiopsis subvermispora
B]
Length = 699
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 205/408 (50%), Gaps = 72/408 (17%)
Query: 18 PVDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE------- 69
P +S F+ P D L +++ L+++G+S LF VQ AV +
Sbjct: 180 PTQLSPFDTTPDSDSGTGLSEKMRKRLKDLGVSELFAVQTAVIPFLLASSRLRSLYLPYD 239
Query: 70 --RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
RDLC+++PTGSGKTL+Y LPI +TL++R V LRALVVLPTRDL QV++ F A+A
Sbjct: 240 PPRDLCVSAPTGSGKTLAYVLPITETLTSRIVTRLRALVVLPTRDLVNQVRETFEAVAKG 299
Query: 128 VGLSVGLAVGQSSIADEISELI---KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
GL +G A GQ S A E ++L+ RP +Q S VDIL+ TPGRL+
Sbjct: 300 RGLKIGTATGQHSFAHEQAQLVAERSRP-------------VQGGSSKVDILICTPGRLI 346
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR-----------SDNENRF 233
DH+N T F+L+HL YLV+DE DRLL +++Q WL VL T S +E R
Sbjct: 347 DHLNGTPNFSLQHLRYLVIDEADRLLAQSFQDWLAQVLSATNAPQRLDDAETSSISEGRL 406
Query: 234 SDAST--------FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
S S+ L AF L R +K K++ SATLT+DP+K+A
Sbjct: 407 SSTSSPTAIPYPDALSPAFLHL-LDRMPASTTDVDEKTEASCQKLLFSATLTRDPSKIAA 465
Query: 286 LDLHHP-LFLTTGET----------------RYKLPERLESYKLICESKLKPLYLVALLQ 328
L+LH P F+ T ++ +P L ++CE+ KPL L L+
Sbjct: 466 LNLHSPKYFVVQSRTDRSDSKEDGVLNIVMEKFSMPSTLSENMIVCETSEKPLMLFHLVH 525
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSG 367
+ +VFT S EST RL L F G RI +K YS
Sbjct: 526 AHSVTNALVFTKSAESTARLVRLFEFFEAAQSSTAQGSARIVVKAYSS 573
>gi|302683871|ref|XP_003031616.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
gi|300105309|gb|EFI96713.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
Length = 566
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 186/360 (51%), Gaps = 48/360 (13%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW--------QETIGPGLFERDLCINSPTGSGKTLSY 86
L R + L +GI+ LF VQ A+ + P RD C+++PTGSGKTL+Y
Sbjct: 87 LSQRTRKRLHELGITELFAVQTALLPFLLANPSRAVYTPYNLPRDACVSAPTGSGKTLAY 146
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 146
PIV+ LS+R LRALVV+PTRDL QVK+ F A+ GL +G+ GQ S + E S
Sbjct: 147 VTPIVEVLSSRITTRLRALVVVPTRDLVTQVKETFEAVGKGRGLKIGVVTGQHSFSHEQS 206
Query: 147 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
+++ D L S VDIL+ TPGRL+DH+N T FTL+HL +L++DE
Sbjct: 207 QIVG----------DSTTSLAGGTSKVDILICTPGRLIDHLNGTTNFTLQHLRFLIIDEA 256
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD----- 261
DRLL +++Q WL TVL T S + LP A + + GF +
Sbjct: 257 DRLLAQSFQGWLSTVLAATTQSTVPSTSSQDSNLPRAEAAAPHVVPA---LGFPNVLSRQ 313
Query: 262 --KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF-----------LTTG---------ET 299
+P K++ SATLTQDP KLA L+LH+P + +T+G
Sbjct: 314 PERPRSSCQKLLFSATLTQDPGKLAALNLHNPKYFIVRSKAKRETITSGILPDVADVVME 373
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
R+ +PE L + +C+ KPL L+ S G +VFT S EST RL L F + R
Sbjct: 374 RFSMPEGLTEHMAVCDPADKPLAFFHLITSHGIRNALVFTKSAESTTRLVRLFEFFEKAR 433
>gi|409048731|gb|EKM58209.1| hypothetical protein PHACADRAFT_171465 [Phanerochaete carnosa
HHB-10118-sp]
Length = 681
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 192/370 (51%), Gaps = 47/370 (12%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--------DLCINSPTGSGKTLSY 86
L + K LQ +GI+ LF VQ AV + R D+C+++PTGSGKTL+Y
Sbjct: 189 LSEKTKKRLQELGITELFAVQTAVIPFLMSDQKQRRLYLHDPPHDICVSAPTGSGKTLAY 248
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 146
LPIV+ LS+R + LRAL+VLPTRDL QV++ F A+A L +G A GQ S A E S
Sbjct: 249 VLPIVELLSSRVITRLRALIVLPTRDLVTQVRETFEALAKGRSLKIGTATGQHSFAHEQS 308
Query: 147 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
+L+ L LQ S +DIL+ TPGRL+DH+N T F+L+HL +LV+DE
Sbjct: 309 QLVADRTLR----------LQGGSSKIDILICTPGRLIDHLNGTPNFSLQHLRFLVIDEA 358
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG------------ 254
D+LL +++Q WL VL TR D + + S+ S+ T
Sbjct: 359 DKLLAQSFQDWLARVLSATRPSEIPTSPDLVSGVASSTDSIPTPDGLAPAFLHIFHGIPH 418
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR------------- 300
V F + K++ SATLT+DP+K+A L+L P F+ G +R
Sbjct: 419 VRTDFDEPKETSCQKLLFSATLTRDPSKIAALNLRDPKYFVVQGSSREIATQQEGVLDLV 478
Query: 301 ---YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
+ +P L + ++CES KPL L L+ + G + +VFT S EST RL L F
Sbjct: 479 MEKFNMPATLLEHMIVCESSQKPLVLFHLVHTHGVKNALVFTKSAESTARLVKLFEFFEL 538
Query: 358 LRIKIKEYSG 367
RI E G
Sbjct: 539 SRISSTEQQG 548
>gi|299750023|ref|XP_001836493.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408706|gb|EAU85306.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 692
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 191/359 (53%), Gaps = 51/359 (14%)
Query: 43 LQNMGISSLFPVQVAVWQETI-----GPGLFE-----RDLCINSPTGSGKTLSYALPIVQ 92
L +GI+ LF VQ A+ + G GL+ DLC+++PTGSGKTL+Y LPIV+
Sbjct: 203 LAELGITELFAVQTAIVPHLLTGSSSGGGLYRPYDPPYDLCVSAPTGSGKTLAYVLPIVE 262
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
TL R V LRALVVLPTRDL QV++ F AI+ GL +G A GQ S A E S+L+
Sbjct: 263 TLQTRVVTRLRALVVLPTRDLVGQVRETFEAISKGTGLKIGSASGQHSFAHEQSQLV--- 319
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
YD L S VDIL+ TPGRLMDH+ T F+L+HL YLV+DE DRLL +
Sbjct: 320 -------YDRTSHLAGGSSKVDILICTPGRLMDHLVGTPNFSLQHLRYLVIDEADRLLAQ 372
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTF--LPSAFG--SLKTIRRCGVERGFKDKPYPRL- 267
++Q WL VL R+ + F D++T +PS+ +++ I P P +
Sbjct: 373 SFQDWLAQVLAAIRTPKKGTFLDSTTVDNIPSSTSPYTIQPIPDGLAPNTLHQLPIPDIP 432
Query: 268 -----------VKMVLSATLTQDPNKLAQLDLHHPLFL--TTGET-------------RY 301
K++ SATLT+DP K+A LDL P ++ +G+ ++
Sbjct: 433 TFLNEDRASSCQKLLFSATLTRDPGKIAALDLRDPRYIIVQSGKDQSVEENVTQVVLEKF 492
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360
+P+ L + ++ KPL + L+ S +VFT S EST RL L F E R+
Sbjct: 493 AVPDTLREHMIVVNPSKKPLIMFHLVYSHQVTNALVFTKSAESTTRLLRLFEFFEEARM 551
>gi|293334099|ref|NP_001169826.1| uncharacterized protein LOC100383718 [Zea mays]
gi|224031859|gb|ACN35005.1| unknown [Zea mays]
Length = 174
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Query: 128 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 187
VGLSVG AVGQSSIADE+S L+ +PK E D E V E Q+ +DILVATP RLMDHI
Sbjct: 2 VGLSVGSAVGQSSIADEVSSLVPKPKQEFYPTIDEEYVQMEPQTKIDILVATPERLMDHI 61
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS---DASTFLPSAF 244
N T GF+LEHL YLV+DETDR++REAYQ+WLPTV+QLT S ++ D+ T L
Sbjct: 62 NMTNGFSLEHLQYLVIDETDRMVREAYQSWLPTVIQLTHSISQGHSWHDIDSQTLL---- 117
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
L +IRR GVER FK K YPRL KMVLSATLTQDP+KL+QL+LHHPL L +G+ RY
Sbjct: 118 HPLTSIRRSGVERVFKGKCYPRLGKMVLSATLTQDPSKLSQLELHHPLLLNSGKKRY 174
>gi|393245833|gb|EJD53343.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 522
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 190/355 (53%), Gaps = 51/355 (14%)
Query: 29 LDHLPC--LDPRLKVALQNMGISSLFPVQVAVWQETIG--------PGLFERDLCINSPT 78
LD LP L R K L+++GI LF +Q A+ + P RD+C ++PT
Sbjct: 52 LDALPAGTLSERTKKRLKDLGIRELFAIQTALVPHLLAKPTRALYLPYSPPRDVCASAPT 111
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKTL+Y LP+ + L+ RAV LRAL+VLPTRDL QV++VF A+A GL VG G
Sbjct: 112 GSGKTLAYVLPLAELLAMRAVPRLRALIVLPTRDLVAQVREVFEAVAKGAGLRVGSVTGA 171
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
+S A E ++L+ + +S VD+LV TPGRL+DH++ T GFTL+HL
Sbjct: 172 ASFAHEKAQLVDK----------------RGESKVDVLVCTPGRLIDHLDGTEGFTLQHL 215
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQL-----TRSDNENRFSDASTFLPSAFGSLKTIRRC 253
+LV+DE DRLL +++Q WL VL T S A +FLP F S + R
Sbjct: 216 RFLVIDEADRLLTQSFQDWLARVLSAITPPSTPSSTLPSRPVAPSFLPHPFASAGSNLRP 275
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------ETRYKLPE 305
F+ P P KM+LSATLT+DP +LA L LHHP + E +PE
Sbjct: 276 ----DFEPPPRPSCQKMLLSATLTRDPGRLAALGLHHPQYFVVSSSGGAAAPEEFGAVPE 331
Query: 306 RLESYKLICESKLKPLYLV------ALLQSLGEEK--CIVFTSSVESTHRLCTLL 352
L+ + + KPL L LL + GEEK +VF SVE+ RL LL
Sbjct: 332 GLDERFCVIDPAEKPLVLAWILREHVLLAAGGEEKKQVLVFCKSVEAATRLGVLL 386
>gi|388582635|gb|EIM22939.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 675
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 197/395 (49%), Gaps = 60/395 (15%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE KK +P + PVD + H + RLK L ++G SLF VQ+A
Sbjct: 165 EELKKLGLPDVFANEIPVDANQTFPSAQSHTLGIGQRLKSRLTDVGFESLFAVQLAAIPL 224
Query: 62 TIG-----------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
IG P RD+C+++PTGSGKTL Y LPIV+ +S R V LRALVVLPT
Sbjct: 225 LIGDLKENIRHPLYPSESPRDICVSAPTGSGKTLGYTLPIVEIISRRLVTRLRALVVLPT 284
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP-KLEAGICYDPEDVLQEL 169
RDL QVK+ F A L VG GQ S E ++L+ + + AG C
Sbjct: 285 RDLVSQVKETFEIFAKGTDLKVGTITGQQSFQQEQAKLVDQTDSVLAGGC---------- 334
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYL---------------VVDETDRLLREAY 214
S VDIL+ATPGRL+DHIN+T FTL+HL +L V+DE DRLL +++
Sbjct: 335 -SKVDILIATPGRLIDHINSTPNFTLQHLRFLVGILTYIFMELIYAKVIDEADRLLNQSF 393
Query: 215 QAWL---------PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
Q+W+ P Q R ++ S + ++T R +RG +
Sbjct: 394 QSWIDRIQVALTTPIQTQPKRDTHDALGYPNSMLIDEKHDLIETFERP--QRGVQ----- 446
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLY 322
KM+ SATLT DP+K+ L L+ P F+ + Y +P LE ++ E+ KPL
Sbjct: 447 ---KMLFSATLTTDPSKIRSLHLNEPKFVIVRNNKVEDYAIPTTLEERMIVSETAYKPLM 503
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
L+ LL G + + FT SVES RL LL F E
Sbjct: 504 LLHLLHQRGVRRALCFTKSVESATRLMHLLRLFKE 538
>gi|219122463|ref|XP_002181564.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406840|gb|EEC46778.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 453
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 193/343 (56%), Gaps = 38/343 (11%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPG----LFERDLCINSPTGSGKTLSYALPIVQ 92
P L L+ G ++ FP+Q + I + RD+CI +PTGSGKTL+Y LP++
Sbjct: 17 PFLTNNLKRDGFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLN 76
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+L+NR +R LRALVVLP+RDLA QV VF + L VGLA+GQS E ++
Sbjct: 77 SLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQ 136
Query: 153 KLEAGICYD-PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
E G +D PE ++ QS +D+LV TPGRL+DH++ T GF+LEHL +L+VDE DRLL
Sbjct: 137 AFEDGNDHDLPEK--RDPQSTIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLS 194
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ Y W+ V+Q S D + F + S +++ +P +L K +
Sbjct: 195 QTYHNWIGRVIQSANSGRGGVVGDDTDF--NTNDSYRSVASSVC------RPV-QLRKFL 245
Query: 272 LSATLTQDPNKLAQL--------DLH-----HPLFLTTGETRYKLPERLESYKLICESKL 318
+SATLT+DP KLA L D+H H F T +Y +PE L + + C ++
Sbjct: 246 VSATLTRDPQKLASLKLVNPKHFDVHQLRTGHQGFFNTNTKKYSMPEGLHEHTVECTAEQ 305
Query: 319 KPLYLVALL---------QSLGEEKCIVFTSSVESTHRLCTLL 352
KP+ L+AL+ QS ++ IVFT+S++STHRL LL
Sbjct: 306 KPIVLLALVLDQLTPQQSQSSSKQSVIVFTASLDSTHRLARLL 348
>gi|345314845|ref|XP_001512662.2| PREDICTED: ATP-dependent RNA helicase DDX51, partial
[Ornithorhynchus anatinus]
Length = 652
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 205/387 (52%), Gaps = 46/387 (11%)
Query: 2 EEAKKKSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVA 57
++A +K P LP W+ P V S+ ED P+ +P + P ++ L+ GISS FPVQ A
Sbjct: 168 KKALQKVQPFLPQWLAEPSRVRKSVTEDLVPIRDIPGIHPDVQKKLEANGISSYFPVQAA 227
Query: 58 VWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
V +G G + RD+C+++PTGSGKTLS+ +P+VQ LS RAV +RALVV
Sbjct: 228 VIPVVLESATHGFLVGRGGYRPRDICVSAPTGSGKTLSFVIPVVQVLSERAVCHVRALVV 287
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
LPT++LA QV VF L V L GQ +A E L++ E Y
Sbjct: 288 LPTKELAQQVSKVFHTYTEQTALRVALITGQKPLAKEQELLVQ----ETDTGY------- 336
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 227
+S DI+VATPGRL+DHI+ T GF+L L +LV+DE DR++ Q+WLP V+
Sbjct: 337 --RSLADIVVATPGRLVDHIDQTPGFSLRQLRFLVIDEADRMIDSMQQSWLPRVMAAV-F 393
Query: 228 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 287
+A G + C +P L K++ SATLT++P KL QL
Sbjct: 394 GGTGSGGPGELLQRTAPGVITAASSC--------RPQMPLQKLLFSATLTRNPEKLQQLG 445
Query: 288 LHHP-LFLTT-------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 339
L+ P LF TT G+ +Y P L Y + C KP+ ++ LL + + FT
Sbjct: 446 LYQPRLFSTTGTREGPAGDGKYTFPAGLSHYYVPCSLSSKPMLVLHLLHQEDFPRVLCFT 505
Query: 340 SSVESTHRLCTLLNHFGELRIKIKEYS 366
+S E++HRL L+ FG +K+ E+S
Sbjct: 506 NSRENSHRLFLLIQAFGG--VKVAEFS 530
>gi|449663831|ref|XP_002165436.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Hydra
magnipapillata]
Length = 734
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 201/375 (53%), Gaps = 57/375 (15%)
Query: 6 KKSMPVLPWMRSPVDVSLFED----CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--- 58
K+++P W+ PV +S D +D L + L++ GI LFPVQ AV
Sbjct: 182 KRALP--RWLAEPVSISANIDKENESIVDSLDYITKNTINNLKSSGIEHLFPVQTAVITY 239
Query: 59 -WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+T RD+C+ +PTGSGKTLSY LP++++L+ V+ L LVVLP++DLA+QV
Sbjct: 240 MHSQTKMLNFPPRDICVEAPTGSGKTLSYVLPVIESLTQYIVKELYCLVVLPSKDLAIQV 299
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
K VF++ + VGL G ++ E S+L +C P+ + + V+ILV
Sbjct: 300 KQVFSSYLKGTNIKVGLICGVKTLEKERSKL---------VCKGPQGYM----NMVEILV 346
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T GF+L+HL +LV+DE DRLL + Y WL VL+ +S + +F
Sbjct: 347 ATPGRLVDHLKTTSGFSLKHLRFLVIDEADRLLSQDYSGWLELVLESAQSLSYRKFPHPL 406
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 296
T R F+ P L K++ SATLTQ+P KLA L L++P+ +
Sbjct: 407 TV-----------------RTFQKNIIP-LQKLLFSATLTQNPEKLAPLRLYNPILFISK 448
Query: 297 ---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
E R+ +PE+L +I + +LKPL +V L+ L ++ + FT S
Sbjct: 449 RDNEKTKKDGSTENKSEFRFIVPEQLVEKMVIVKEELKPLVIVHLMLKLKYKRILCFTKS 508
Query: 342 VESTHRLCTLLNHFG 356
+E+THRL LL G
Sbjct: 509 IEATHRLHLLLQSIG 523
>gi|194214438|ref|XP_001915702.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Equus caballus]
Length = 550
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 207/393 (52%), Gaps = 59/393 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V+ ++ +D P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 54 KVQPFLPAWLAEPSCVEKNVTKDLVPIEDVPEVHPDLQKKLRAHGISSYFPVQAAVIPAL 113
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 114 LESMANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPLVQALLHRAVCQVRALVVLPTKE 173
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ ++A E L++R + +
Sbjct: 174 LAQQVSKVFNVYTDATPLRVALVTGQKTLAKEQETLVQR-------------TVDGFRCL 220
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL--QLTRSDNE 230
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ R +
Sbjct: 221 ADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVMAAAFPREGTK 280
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
+ FS P A + T C P L K++ SATLTQ+P KL QL LH
Sbjct: 281 SLFSLLQRRQPQAITAASTC--C---------PQMPLQKLLFSATLTQNPEKLQQLGLHQ 329
Query: 291 PLFLTTG-----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 333
P +TG +Y P L + + C + KPL ++ L+ +
Sbjct: 330 PRLFSTGLAQRGSRDADAEADGESAGKYTFPAGLTHHYVPCSLRSKPLVVLHLVLEMNFS 389
Query: 334 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S E++HRL L FG + + E+S
Sbjct: 390 RVLCFTNSRENSHRLFLLAQAFGG--VSVAEFS 420
>gi|402224982|gb|EJU05044.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 540
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 196/359 (54%), Gaps = 57/359 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI-GP----GLFE-----RDLCINSPTGSGKTL 84
L+ RL+ L+ +G+ +LF VQ A+W + GP GL+E RD+C+++PTGSGKTL
Sbjct: 57 LNERLQRRLEALGVDNLFAVQAALWPWLLTGPEARRGLYEPRRAPRDVCVSAPTGSGKTL 116
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+YA+PIV+ LS R V LR+LV+LPTRDL QVK+ F A+ GL VG A G S A E
Sbjct: 117 AYAVPIVEILSVRVVTRLRSLVILPTRDLVQQVKETFEALCKGTGLKVGSATGAQSWAKE 176
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
L++ D E LQ S +DILV TPGRL+DH++ T F+L+HL +LV+D
Sbjct: 177 QKALVE----------DLETKLQGGSSNIDILVCTPGRLIDHLDDTPNFSLQHLRFLVID 226
Query: 205 ETDRLLREAYQAWLPTVL-QLTRSDN----------ENRFSDASTFLPSAFGSLKTIRRC 253
E DRLL +++Q++LP +L LT + + + S A LP FG + C
Sbjct: 227 EADRLLSQSFQSFLPRLLTALTPTPHPVPPSSDLLIPDALSPAWLDLPHEFGWAPMLPSC 286
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT----GE-------TRY 301
K++ SAT+T+DP L L L +P F+ T GE +
Sbjct: 287 Q--------------KLLFSATMTRDPGVLKSLGLRNPKYFIVTAAPEGERDEAIIREEF 332
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360
+P+ L Y L+ + LKPLYL LL + +VFT S EST RL L F R+
Sbjct: 333 SVPDTLSEYLLVVPTDLKPLYLFHLLHTHPITNALVFTKSTESTTRLLKLFEFFESARL 391
>gi|449281559|gb|EMC88606.1| ATP-dependent RNA helicase DDX51, partial [Columba livia]
Length = 489
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 204/388 (52%), Gaps = 57/388 (14%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----AVWQE 61
P LP W+ P V + ++ P+ +P + PRL LQ GI S FPVQ A+ Q
Sbjct: 6 PFLPQWLAQPKLVQKRIKDNLVPVGDIPGIHPRLLKKLQMNGIQSFFPVQAEVIPAILQS 65
Query: 62 T-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
+G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT++LA
Sbjct: 66 ASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTKELAQ 125
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV VF GL V L GQ S A E L++ K G C S DI
Sbjct: 126 QVSKVFNIYTDGTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADI 172
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL DHIN T GF+L L +LVVDE DR++ + +Q L +++ EN
Sbjct: 173 IVATPGRLTDHINQTPGFSLTQLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQVENGSGS 231
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLF 293
+ F + G + C YP+ L K++ SATLTQDP KL QL+L P
Sbjct: 232 NTLFWRTKPGPITAASSC----------YPQIPLQKLLFSATLTQDPEKLQQLNLFQPRL 281
Query: 294 LTT--------GE-------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
T+ GE T+Y LPE L + C+ KPL L+ + ++ + + F
Sbjct: 282 FTSVYSEKKSLGEGTETEQDTKYTLPEGLSQCYVPCDLNSKPLLLLHFMLTMKFSRVLCF 341
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG R+ + E+S
Sbjct: 342 TNSREASHRLFLLVQAFG--RVTVAEFS 367
>gi|224072122|ref|XP_002196880.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Taeniopygia
guttata]
Length = 707
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 198/390 (50%), Gaps = 53/390 (13%)
Query: 6 KKSMPVLP-WMRSPVDVS-LFED--CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V D CP+ ++P + P+L LQ GI S FPVQ A
Sbjct: 212 QKVQPFLPQWLAEPKRVQKRIRDNLCPVRNMPGIHPQLLKKLQRNGIDSFFPVQAEVIPA 271
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 272 ILQSAANGYLLGRGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCHVRALVVLPTK 331
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV VF GL V L GQ S A E L++ K G C S
Sbjct: 332 ELAQQVSKVFNIYTDGTGLKVVLITGQKSFAKEQEMLVE--KKVTGYC-----------S 378
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
DI+VATPGRL DHIN T GF+L L +LVVDE DR++ + +Q L +++ EN
Sbjct: 379 LADIVVATPGRLTDHINQTPGFSLTQLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQGEN 437
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
F + G L C P L K++ SATLTQDP KL QLDL P
Sbjct: 438 SSGSNMLFQRTKPGPLTAASSCS--------PQIPLQKLLFSATLTQDPEKLQQLDLFQP 489
Query: 292 LFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T+ +Y LPE L + C+ KPL L+ + + + +
Sbjct: 490 RLFTSVYSEKNRDGTETEQDTTNKYTLPEGLSQCYVPCDLNSKPLLLLYFMLKMKFTRVL 549
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
FT+S E++HRL L+ FG I + E+S
Sbjct: 550 CFTNSREASHRLFLLVQAFGG--ITVAEFS 577
>gi|343426780|emb|CBQ70308.1| related to DBP6-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 852
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 195/366 (53%), Gaps = 46/366 (12%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTL 84
L ++ L+ +G+S F VQV+V + P RDLC+++PTGSGKTL
Sbjct: 333 ALSDTVRSRLEALGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTL 392
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+Y++PIV+ L R + LRAL+VLPTRDL QV+ +A GL +G A GQ S A E
Sbjct: 393 AYSVPIVEVLRTRQIVRLRALIVLPTRDLVSQVRSTLELLAKGSGLRIGTATGQHSFAHE 452
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
++L+ + D ED +L+S VDILVATPGRL+DH+++T GFTL HL +LV+D
Sbjct: 453 QNQLVGTSSSD----EDEEDA--QLESKVDILVATPGRLIDHLDSTPGFTLAHLRFLVID 506
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV----ERGFK 260
E DRLL +++Q WL VL T + S A L T G+ + +
Sbjct: 507 EADRLLNQSFQEWLRRVLAATEGTANSDVHSQSRGSAQAPYELLTSSASGLGAATQSTLQ 566
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYK 302
++ P + K++ SATLT+DP K+A L L +P ++T +T R+
Sbjct: 567 EEAVPSVQKLLFSATLTRDPAKIAALGLRNPHYITVQDTHSAGDDENGRVNGAQQHERFS 626
Query: 303 LPERLESYKLICESKLKPLYLVALLQSLGEE---------KCIVFTSSVESTHRLCTLLN 353
LP L + L+ S KP +L+ LL ++ K + FT SV+S RL L+
Sbjct: 627 LPHSLREHMLVTTSADKPFHLLYLLHRPDQDVDNNDSRIRKALCFTKSVDSAARLVKLIE 686
Query: 354 HFGELR 359
F ++R
Sbjct: 687 IFEQVR 692
>gi|392594884|gb|EIW84208.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 620
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 182/343 (53%), Gaps = 38/343 (11%)
Query: 43 LQNMGISSLFPVQVAVWQ----ETIG------PGLFERDLCINSPTGSGKTLSYALPIVQ 92
L ++GI+ LF VQ A+ ET P RD+C+++PTGSGKTL+Y LPIV+
Sbjct: 149 LGDLGITELFAVQTALLPFLLPETHSQRALYVPYEPLRDVCVSAPTGSGKTLAYVLPIVE 208
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
LS R V LRAL+VLPTRDL QV++ F ++ GL G A GQ S + E S+L+
Sbjct: 209 ILSTRIVTRLRALIVLPTRDLVTQVRETFEVVSKGRGLKTGTATGQHSFSHEQSQLVA-- 266
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
D L+ S VDIL+ TPGRL+DHIN T F+L+HL +LV+DE DRLL +
Sbjct: 267 --------DSSTSLRGGSSKVDILICTPGRLIDHINGTPNFSLQHLRFLVIDEADRLLAQ 318
Query: 213 AYQAWLPTVLQLT----RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
++Q WL VL T + F LP+ G T + ++
Sbjct: 319 SFQDWLAQVLAATLPPDHAGAAYTFPTDRYGLPTPDGLAPTFVHH-FQTDIDEEKESSCQ 377
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLT------------TGETRYKLPERLESYKLICES 316
K++ SATLT+DP KLA L L P + GE ++ +P L+ + +ICE
Sbjct: 378 KLLFSATLTRDPGKLAALKLRDPKYFVVQAKEKLDGNDYVGE-QFTMPATLKEHMIICEP 436
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
KPL L LLQ+ + ++FT S EST RL L HF +
Sbjct: 437 SQKPLMLFYLLQNRSVDNALIFTKSSESTSRLVRLFEHFATFK 479
>gi|336383556|gb|EGO24705.1| hypothetical protein SERLADRAFT_369949 [Serpula lacrymans var.
lacrymans S7.9]
Length = 651
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 190/372 (51%), Gaps = 56/372 (15%)
Query: 38 RLKVALQNMGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTLSYA 87
+++ L+ +GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL+Y
Sbjct: 179 KMRRRLKELGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTLAYV 238
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
LPIV+TLS+R + LRALVVLPTRDL +QV++ F + GL VG A GQ S A E S+
Sbjct: 239 LPIVETLSSRIITRLRALVVLPTRDLVMQVRETFEEVGKGRGLKVGTATGQHSFAHEQSQ 298
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
LI D L S +DIL+ TPGRL+DH+N T F+L+HL +LV+DE D
Sbjct: 299 LIA----------DRSSGLLGGSSKIDILICTPGRLVDHMNGTPNFSLQHLRFLVIDEAD 348
Query: 208 RLLREAYQAWLPTVLQLT-----------RSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
RLL +++Q W+ V+ T R++ E F A P + I
Sbjct: 349 RLLAQSFQDWVARVVTATRPTTFPSSGTPRAEEEETFGCADGLAPPLLHAKYAIANT--- 405
Query: 257 RGFKD-KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET--------------RY 301
G+ D KP K++ SATL +DP KLA L L + + RY
Sbjct: 406 YGYMDEKPSSSCQKLLFSATLPRDPGKLAGLQLRDVKYFVVQKARGGREEGVLDVVMERY 465
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF------ 355
+P L + ++C S KPL L L+Q +VFT S EST RL L F
Sbjct: 466 TMPATLREHMIVCASSEKPLVLFDLVQRHKVRNGLVFTKSAESTARLVRLFELFEKAVAG 525
Query: 356 -GELRIKIKEYS 366
G L + K YS
Sbjct: 526 EGRLGVVAKAYS 537
>gi|395513523|ref|XP_003760973.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Sarcophilus harrisii]
Length = 668
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 204/393 (51%), Gaps = 60/393 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ D P+ +P + P L+ L+ GI S FPVQ AV
Sbjct: 175 KVQPFLPKWLAEPSRVQKSVKNDLVPIQDIPGIHPCLQKKLKTNGILSYFPVQAAVIPAL 234
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ D+C+++PTGSGKTLS+ +P++Q L R V +RALVVLPT++
Sbjct: 235 LESASHGFLVGKGGYQPSDICVSAPTGSGKTLSFVIPVIQVLLERVVCHIRALVVLPTKE 294
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A GL V GQ S+A E L++ K ++G S
Sbjct: 295 LAQQVSKVFNVYADGTGLRVAQITGQKSLAKEQEILVQ--KTDSG-----------YHSL 341
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L L +L++DE DR++ +Q+WLP V++ ++
Sbjct: 342 ADIVVATPGRLVDHIDQTPGFSLRQLRFLIIDEADRMIDSMHQSWLPRVVKAVFHGDD-- 399
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A GS RR + +P L K++ SATLT++P KL +L L+
Sbjct: 400 ----------APGSSPLFRRVEPRAITAASTSQPQMPLQKLLFSATLTRNPEKLQELGLY 449
Query: 290 HPLFLTTG----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 333
P +TG E +Y P L + + C KPL ++ L+++L
Sbjct: 450 QPRLFSTGLESQESTVQPGIEQDVEGKYAFPAGLSHFYVPCSLNSKPLVILHLMRNLKFS 509
Query: 334 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S E +HRL L+ FG I + E+S
Sbjct: 510 RVLCFTNSREHSHRLFLLVKAFGG--IPVAEFS 540
>gi|195997819|ref|XP_002108778.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
gi|190589554|gb|EDV29576.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
Length = 625
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 201/392 (51%), Gaps = 72/392 (18%)
Query: 7 KSMPVLP----WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
+S P+ P W+ P ++ + +D + L + L+ G+S LFPVQ T
Sbjct: 159 QSTPLSPNFPQWIAKPNYINSHDKIKIDQVSYLQKFILKKLKKQGMSHLFPVQ-----ST 213
Query: 63 IGPGLFE-------------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
I P + + D+C+++PTGSGKTL Y LPI+Q L R+V LRAL+++P
Sbjct: 214 IIPTILKDYQHFGLCTPLPVHDICVSAPTGSGKTLVYVLPIIQVLMRRSVMLLRALILVP 273
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
T DLA QVK VF GL + A+GQ + E ELI D L
Sbjct: 274 TADLAYQVKKVFEQFNEGSGLKIATAIGQRNFKIEQGELI--------------DALGG- 318
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
+S VDIL+ATPGRL+DHIN T+ FTLEHL +LV+DE D+LL ++ + + L+
Sbjct: 319 RSNVDILIATPGRLIDHINMTKHFTLEHLRFLVLDEADKLLISSHHQLIMSALKACYK-- 376
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV-----------KMVLSATLTQ 278
++ S +P L T R D P P +V K++ SATLT
Sbjct: 377 ----AEQSQIIPPNKFILHTTPR--------DPPIPSIVSKYCNNKLPLQKLLFSATLTY 424
Query: 279 DPNKLAQLDLHHPLF---------LTTGETRYKL-PERLESYKLICESKLKPLYLVALLQ 328
DP KLA L+L PL L+T E Y + P L Y +ICE KPL ++ +Q
Sbjct: 425 DPEKLAPLELFSPLLYQISDQKSNLSTNEIDYYVTPAELTEYYIICEPGEKPLTIIHFMQ 484
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360
+L + + FT+S EST RL LL+ FG++R+
Sbjct: 485 ALKHLRVLCFTNSKESTKRLSLLLSIFGDIRV 516
>gi|326929902|ref|XP_003211092.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Meleagris
gallopavo]
Length = 582
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 206/395 (52%), Gaps = 61/395 (15%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V + E+ P+ +P + P+L LQ GI S FPVQ A
Sbjct: 85 QKVQPFLPHWLAQPKLVQKRIKENLTPIKDVPGIHPKLLKKLQMNGIESFFPVQAEVIPA 144
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
V Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 145 VLQSASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTK 204
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV VF GL V L GQ S A E L++ K G C S
Sbjct: 205 ELAQQVGKVFNIYTDGTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------S 251
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNE 230
DI+VATPGRL DHI+ T GF+L L +L++DE DR++ + +Q WL V++ +++NE
Sbjct: 252 LADIIVATPGRLADHISKTPGFSLTQLRFLIIDEADRMIDDMHQNWLNQVVKAAFQAENE 311
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDL 288
+ + F + G + C YP+ L K++ SATLTQDP KL QL L
Sbjct: 312 D--GSNTLFQRTKPGPVTAAGCC----------YPQIPLQKLLFSATLTQDPEKLQQLGL 359
Query: 289 HHPLFLTT-----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
P T+ E +Y LPE L + C+ KPL L+ + +
Sbjct: 360 FQPCLFTSVYSEKKPLRDGTETEQDSEEKYTLPEELSQSYVPCDLNSKPLLLLHFMLTKK 419
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S E++HRL L+ FG I + E+S
Sbjct: 420 FTRVLCFTNSREASHRLFLLVQAFG--GITVAEFS 452
>gi|443895519|dbj|GAC72865.1| protein kinase [Pseudozyma antarctica T-34]
Length = 860
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 206/382 (53%), Gaps = 55/382 (14%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTL 84
L ++ L+ +G+S F VQV+V + P RDLC+++PTGSGKTL
Sbjct: 344 ALSDTVRSRLEALGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTL 403
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+Y +PIV+ L R + LRAL+VLPTRDL QV+ +A GL + A G S A E
Sbjct: 404 AYTVPIVEVLRTRQIVRLRALIVLPTRDLVSQVRSTLELVAKGSGLRIATATGHHSFAHE 463
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
++L++ G+ D +D + QS VDIL+ATPGRL+DH+++T GFTL HL +LV+D
Sbjct: 464 QTQLVE------GLDADDDDDSVQKQSKVDILIATPGRLIDHLDSTPGFTLAHLRFLVID 517
Query: 205 ETDRLLREAYQAWLPTVLQLTR--SDNENRFSDAS------TFLPSAFGSLKTIRRCGVE 256
E DRLL +++Q WL VL T ++ ++R ++A+ L SA R ++
Sbjct: 518 EADRLLNQSFQEWLRRVLSATEGVANADSRCTEATPAQAPYELLSSASSGFGAAARSTLQ 577
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--------GET--------- 299
++ P + K++ SATLT+DP K+A L L +P ++T GE+
Sbjct: 578 ----EEAVPSVQKLLFSATLTRDPAKIAALGLRNPHYITVQDDNPAADGESGLAERAQHE 633
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEE-------KCIVFTSSVESTHRLCTLL 352
R+ LP L + L+ S KP +L+ LL +E K + FT SVES RL L+
Sbjct: 634 RFSLPHSLHEHMLVTTSADKPFHLLYLLHRPDDEQAAAKIRKALCFTKSVESAARLVKLV 693
Query: 353 NHFGELRIKIKEYSGLQRQSVR 374
F E+R + SGL + R
Sbjct: 694 EMFEEVR----QESGLIARGAR 711
>gi|194674602|ref|XP_001787674.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
Length = 565
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 205/400 (51%), Gaps = 55/400 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 69 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPVQAAVIPAV 128
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 129 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 188
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 189 LAQQVSKVFNVYTDATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCL 235
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R
Sbjct: 236 ADIMVATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR 295
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ F + L C P L K++ SATLTQ+P KL QL L+ P
Sbjct: 296 -DPCAVFQRTQPRVLTAASMCC--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPR 346
Query: 293 FLTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+TG +Y P L+ + + C + KPL ++ L+ + +
Sbjct: 347 LFSTGSAHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRV 406
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIK--IKEYSGLQRQSV 373
+ FT+S E++HRL L+ FG + + Y QR+S+
Sbjct: 407 LCFTNSRENSHRLFLLVQAFGGVTVAEFSSRYGPGQRKSI 446
>gi|73994975|ref|XP_543351.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Canis lupus
familiaris]
Length = 631
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 205/399 (51%), Gaps = 55/399 (13%)
Query: 7 KSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-- 60
K+ P LP W+ P V S+ ED P++ +P + P ++ LQ GISS FPVQ AV
Sbjct: 137 KAQPFLPLWLAEPSSVGKSVTEDLVPIEDIPEVHPDMQKKLQAHGISSYFPVQAAVIPTL 196
Query: 61 -ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
E+I G DLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++
Sbjct: 197 LESIANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLCRAVCQVRALVVLPTKE 256
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+ E L+++ + +
Sbjct: 257 LAQQVSKVFNIYTDATPLRVALITGQKSLVKEQESLVQK-------------TVDGFRCL 303
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNEN 231
D++VATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V++ SD N
Sbjct: 304 ADVVVATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVEAAFPSDVAN 363
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
F L+ + P L K++ SATLTQ+P KL QL L+ P
Sbjct: 364 ----------DPFALLQRRQLQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQP 413
Query: 292 LFLTTG---------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
+TG +Y P L + + C + KPL ++ L+ + +
Sbjct: 414 RLFSTGLAGRGPRDIDRDGESGGKYTFPTGLSHHYVPCSLRTKPLAILHLILERNFSRVL 473
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
FT+S E++HRL L+ FG + E+S R R+
Sbjct: 474 CFTNSRENSHRLFLLVQAFGG--VAAAEFSSRCRPGQRK 510
>gi|297484677|ref|XP_002694482.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
gi|296478689|tpg|DAA20804.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Bos taurus]
Length = 555
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 205/400 (51%), Gaps = 55/400 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 59 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPVQAAVIPAV 118
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 119 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 178
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 179 LAQQVSKVFNVYTDATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCL 225
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R
Sbjct: 226 ADIMVATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR 285
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ F + L C P L K++ SATLTQ+P KL QL L+ P
Sbjct: 286 -DPCAVFQRTQPRVLTAASMCC--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPR 336
Query: 293 FLTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+TG +Y P L+ + + C + KPL ++ L+ + +
Sbjct: 337 LFSTGSAHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRV 396
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIK--IKEYSGLQRQSV 373
+ FT+S E++HRL L+ FG + + Y QR+S+
Sbjct: 397 LCFTNSRENSHRLFLLVQAFGGVTVAEFSSRYGPGQRKSI 436
>gi|301775625|ref|XP_002923233.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Ailuropoda
melanoleuca]
Length = 517
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 198/379 (52%), Gaps = 50/379 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-- 60
K P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV
Sbjct: 22 KVQPFLPSWLAEPSCVGKSVTEDLVPIEDIPEVHPDMQKKLRAHGISSYFPVQAAVIPAL 81
Query: 61 -ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
E+ G RDLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++
Sbjct: 82 LESTANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLRRAVCQVRALVVLPTKE 141
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF + A L V L GQ S+ E L+++ +
Sbjct: 142 LAQQVSKVFNSYTDATPLRVALITGQKSLVKEQESLVQK-------------TADGFRCL 188
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
D++VATPGRL+DHI+ T GF+L+HL +LV+DE DR++ +Q+WLP V++
Sbjct: 189 ADVVVATPGRLVDHIDQTPGFSLQHLRFLVIDEADRMIDSMHQSWLPRVVEAVFR----- 243
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
SD + P A L+ + P L K++ SATLTQ+P KL QL L+ P
Sbjct: 244 -SDGAKDRPLAL--LQRRQPQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPR 300
Query: 293 FLTTGETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
+TG R Y P L + + C + KPL ++ L+ + +
Sbjct: 301 LFSTGLARRGPRDADEDRDSGGKYTFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLC 360
Query: 338 FTSSVESTHRLCTLLNHFG 356
FT+S E++HRL L+ FG
Sbjct: 361 FTNSRENSHRLFLLVQAFG 379
>gi|71004804|ref|XP_757068.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
gi|46096872|gb|EAK82105.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
Length = 870
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 194/361 (53%), Gaps = 47/361 (13%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +GIS F VQV+V + P RDLC+++PTGSGKTL+Y++PIV+
Sbjct: 358 LEALGISEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYSVPIVEV 417
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
L R + LRAL+VLPTRDL QV+ +A GL +G A GQ S A E ++L+
Sbjct: 418 LRTRQIVRLRALIVLPTRDLVSQVRSTLELVAKGSGLRIGTATGQHSFAHEQNQLVGS-- 475
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
+ + D ++ E + +DIL+ATPGRL+DH+++T GF L HL +LVVDE DRLL ++
Sbjct: 476 -SSAVDQDQDEAQSEPK--IDILIATPGRLIDHLDSTPGFNLAHLRFLVVDEADRLLNQS 532
Query: 214 YQAWLPTVLQLT--RSDNENRFSDASTFLPSA-----FGSLKTIRRCGVERGFKDKPYPR 266
+Q WL VL T ++D R + P+ F S + +++ P
Sbjct: 533 FQEWLRRVLAATNGKTDQAERERASQKSGPAQAPFELFSSSASGLGAAATSTLQEEAAPS 592
Query: 267 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPERLE 308
+ K++ SATLT+DP K+A L L +P ++T +T ++ LP L
Sbjct: 593 VQKLLFSATLTRDPAKIAALGLRNPHYITVQDTNSAGDEDQGRANGVQQHEQFSLPHSLH 652
Query: 309 SYKLICESKLKPLYLVALLQ-------SLGE-EKCIVFTSSVESTHRLCTLLNHFGELRI 360
+ L+ S KP +L+ LL LG K + FT SV+S RL LL F E+R+
Sbjct: 653 EHMLVTTSADKPFHLLYLLHRPDDVNNELGRIRKALCFTKSVDSAARLVKLLEIFEEVRV 712
Query: 361 K 361
+
Sbjct: 713 E 713
>gi|109099284|ref|XP_001105887.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Macaca mulatta]
Length = 664
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 200/388 (51%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 171 KVQPFLPRWLAEPSCVRKNVNEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 230
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 231 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 290
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 291 LAQQVNKVFNIYTDATPLRVSLITGQKSLAKEQESLVQK-------------TADGFRCL 337
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 338 ADIVVATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA------- 390
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A + ++ V P L K++ SATLTQ+P KL QL LH P
Sbjct: 391 FQSEDPTDPCALLQRRQVQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 448
Query: 293 FLTTGETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG R Y P L + + C KPL ++ L+ +G K + F
Sbjct: 449 LFSTGLARRGLEDTDGDGDLGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCF 508
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 509 TNSRENSHRLFLLVQAFGG--VDVAEFS 534
>gi|388851453|emb|CCF54855.1| related to DBP6-ATP-dependent RNA helicase [Ustilago hordei]
Length = 869
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 190/357 (53%), Gaps = 44/357 (12%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +G+S F VQ++V + P RDLC+++PTGSGKTL+Y +PIV+
Sbjct: 355 LEALGVSEWFAVQISVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYTVPIVEV 414
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
L R + LRAL+VLPTRDL QV+ +A GL +G A GQ S A E S+L+
Sbjct: 415 LRTRQIVRLRALIVLPTRDLVSQVRSTLELVAKGSGLRIGTATGQHSFAHEQSQLVW--S 472
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
L G Y+ ++ L+E S VD+L+ATPGRL+DH+++T GFTL HL +LV+DE DRLL ++
Sbjct: 473 LSVGDDYEEQNALKE--SKVDVLIATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQS 530
Query: 214 YQAWLPTVLQLTRSDNENRF----SDASTFLPSAFGSLKTIRRCGVE-RGFKDKPYPRLV 268
+Q WL VL T + +A+ P S G +++ P +
Sbjct: 531 FQEWLRRVLAATEGKGTDAVPQWKGEAAAQAPHELLSGNASGLGGAAWSTLQEEAVPSVQ 590
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPERLESY 310
K++ SATLT DP K+A L L +P ++T ++ R+ LP L +
Sbjct: 591 KLLFSATLTSDPAKIAALGLRNPHYITVQDSHSAGDEEDGRSNGSQQHERFSLPHSLHEH 650
Query: 311 KLICESKLKPLYLVALLQSLGE--------EKCIVFTSSVESTHRLCTLLNHFGELR 359
L+ S KP +L+ LL + K + FT SV+S RL L+ F ++R
Sbjct: 651 MLVTTSADKPFHLLYLLHRPDDVEQNSSRIRKALCFTKSVDSAARLVKLIEIFEQVR 707
>gi|426247154|ref|XP_004017351.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51
[Ovis aries]
Length = 676
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 205/400 (51%), Gaps = 55/400 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 180 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPAVHPDLQKKLRAQGISSYFPVQAAVIPAL 239
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 240 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 299
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 300 LAQQVSKVFNVYTDATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCL 346
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DH++ T GF+L+HL +L++DE DR++ +Q+WLP V+
Sbjct: 347 ADIMVATPGRLVDHVDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 399
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL L+ P
Sbjct: 400 FPSEGPKDPCAL--LQRTQPRVVTAASMCCPQMPLQKLLFSATLTQNPEKLQQLGLYQPR 457
Query: 293 FLTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+TG +Y P L + + C + KPL ++ L+ + +
Sbjct: 458 LFSTGSAYRAPSNPGIDVDGDSGGKYTFPVGLTHHYVPCSLRFKPLVILHLILEMNFSRV 517
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIK--IKEYSGLQRQSV 373
+ FT+S E++HRL L+ FG + + Y QR+S+
Sbjct: 518 LCFTNSRENSHRLFLLVQAFGGVTVAEFSSRYGPGQRKSI 557
>gi|51467974|ref|NP_001003864.1| ATP-dependent RNA helicase DDX51 [Danio rerio]
gi|82200454|sp|Q6DRI7.1|DDX51_DANRE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|49619011|gb|AAT68090.1| DEAD/H box 51 RNA helicase [Danio rerio]
Length = 652
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 203/391 (51%), Gaps = 53/391 (13%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDC-----PLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ +K VLP W+ P DV + +D P+ +P + P L LQ GI S FPVQ
Sbjct: 159 EKDVQKVKRVLPQWLSQP-DV-IQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQ 216
Query: 56 VAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
V E++G GL RD+C+++PTGSGKTL++ +P+VQ LS R VR +RAL
Sbjct: 217 AEVIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRAL 276
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
VLPT++LA QV +VF+A L V + GQ S A E + L ++ G+ +
Sbjct: 277 AVLPTKELAQQVSNVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH----- 328
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
S DI+VATPGRL+DHIN F+L+HL +L++DE DR++ +Q+WL V +
Sbjct: 329 -----SMADIVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAV 383
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
S + S F + G + P L K++ SATLTQ+P KL
Sbjct: 384 YSTPGE--THTSVFRRTVPGPITAASLS--------PPQIPLQKLLFSATLTQNPEKLQL 433
Query: 286 LDLHHP-LFLTT---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
LDLH P LF +T + + P+ L Y + C KPL ++ L L
Sbjct: 434 LDLHQPRLFSSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPA 493
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E HRL L+ FG +++ E+S
Sbjct: 494 LCFTNSREGAHRLYLLVKLFGG--VEVAEFS 522
>gi|297693495|ref|XP_002824053.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 1 [Pongo
abelii]
Length = 672
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 204/391 (52%), Gaps = 52/391 (13%)
Query: 4 AKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
++ P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 176 GREGGRPFLPRWLTEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVI 235
Query: 60 QET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLP
Sbjct: 236 PALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLP 295
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
T++LA QV VF A L V L GQ S+A E L+++
Sbjct: 296 TKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGY 342
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
+ DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +
Sbjct: 343 RCLADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQS 401
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
E+ + F ++ C P L K++ SATLTQ+P KL QL LH
Sbjct: 402 EDPADPCALFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLH 453
Query: 290 HPLFLTTGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
P +TG T +Y P L + + C KPL ++ L+ +G +
Sbjct: 454 QPRLFSTGLTHRGLEDTDGDGDSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRV 513
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L+ FG + + E+S
Sbjct: 514 LCFTNSRENSHRLFLLVQAFGG--VDVAEFS 542
>gi|281340804|gb|EFB16388.1| hypothetical protein PANDA_012336 [Ailuropoda melanoleuca]
Length = 490
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 197/376 (52%), Gaps = 50/376 (13%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ET 62
P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV E+
Sbjct: 3 PFLPSWLAEPSCVGKSVTEDLVPIEDIPEVHPDMQKKLRAHGISSYFPVQAAVIPALLES 62
Query: 63 IGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
G RDLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++LA
Sbjct: 63 TANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLRRAVCQVRALVVLPTKELAQ 122
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV VF + A L V L GQ S+ E L+++ + D+
Sbjct: 123 QVSKVFNSYTDATPLRVALITGQKSLVKEQESLVQK-------------TADGFRCLADV 169
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DHI+ T GF+L+HL +LV+DE DR++ +Q+WLP V++ SD
Sbjct: 170 VVATPGRLVDHIDQTPGFSLQHLRFLVIDEADRMIDSMHQSWLPRVVEAVFR------SD 223
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
+ P A L+ + P L K++ SATLTQ+P KL QL L+ P +
Sbjct: 224 GAKDRPLAL--LQRRQPQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFS 281
Query: 296 TGETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
TG R Y P L + + C + KPL ++ L+ + + FT+
Sbjct: 282 TGLARRGPRDADEDRDSGGKYTFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLCFTN 341
Query: 341 SVESTHRLCTLLNHFG 356
S E++HRL L+ FG
Sbjct: 342 SRENSHRLFLLVQAFG 357
>gi|25455599|gb|AAH40185.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 666
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 201/388 (51%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVKPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRLSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 293 LARQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 339
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 392
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A LK + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 393 FQSEDPADPCAL--LKRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 450
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 451 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 510
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 511 TNSRENSHRLFLLVQAFGG--VDVAEFS 536
>gi|393221493|gb|EJD06978.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 496
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 183/353 (51%), Gaps = 46/353 (13%)
Query: 39 LKVALQNMGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTLSYAL 88
++ L ++GI+ F VQ A+ + L+ +D+C ++PTGSGKTL+Y +
Sbjct: 1 MRKRLLDLGINEFFAVQTALLPFLLPSKRCSRALYLPYDPPQDVCASAPTGSGKTLAYVI 60
Query: 89 PIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
PIV+ LS R LRALVVLPTRDL LQV++VF A+ GL +G+A GQ S A E +L
Sbjct: 61 PIVEILSARIATKLRALVVLPTRDLVLQVQEVFEAVGKGRGLKIGVATGQHSFAHEQGQL 120
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
+ D + Q S VDIL+ TPGRLMDH+N T GFTL+HL +LV+DE DR
Sbjct: 121 VP----------DQDKGSQGGASKVDILICTPGRLMDHLNGTPGFTLQHLRFLVIDEADR 170
Query: 209 LLREAYQAWLPTVLQLTR------SDNENRFS----DASTFLPSAFGSLKTIRRCGVERG 258
LL +++Q WL VL R SD + S AS+ L S+ +
Sbjct: 171 LLAQSFQDWLAQVLSALRPPTQSISDGVSSLSLNKPGASSILGFGHDSIAPAFLPHIPTD 230
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------------GETRYK 302
D + K++ SATLT+DP ++A L L P + G +
Sbjct: 231 LDDPKHSSCQKLLFSATLTRDPARIAALGLRDPKYFVVQATTSIDRDTSGPAALGMENFA 290
Query: 303 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
+P L+ + + + KPL L LL + G +VFT S EST RL LL +F
Sbjct: 291 MPPSLKEHYITTPTARKPLILFHLLHNRGISNALVFTKSAESTARLVKLLEYF 343
>gi|344299254|ref|XP_003421302.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Loxodonta africana]
Length = 690
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 203/391 (51%), Gaps = 55/391 (14%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P+LP W+ P V + E P+ +P + P L+ L+ GISS FPVQ AV
Sbjct: 194 KVQPLLPTWLAEPSWVGKKVTEHLVPIQDIPEVHPDLQRKLRAQGISSYFPVQAAVIPAL 253
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G F RDLC+++PTGSGKTL++ +P+VQTL +R V +RALVVLPT++
Sbjct: 254 LESAAGGFLVGRGGFRPRDLCVSAPTGSGKTLAFVIPVVQTLLHRVVCRIRALVVLPTKE 313
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ + C
Sbjct: 314 LAQQVNRVFNIYTDATPLRVALVTGQKSLAKEQESLVQK-SADGYRCL------------ 360
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 361 ADIVVATPGRLVDHIDQTAGFSLQQLRFLVIDEADRMVDSMHQSWLPRVVAAA------- 413
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A +R V P L K++ SATLTQ+P KL QL LH P
Sbjct: 414 FQSQGPADPCALLQRGPLR--AVTAASTWAPQMPLQKLLFSATLTQNPEKLQQLALHQPR 471
Query: 293 FLTTG-ETR----------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+ G E+R Y PE L + + C KPL ++ L+ ++ +
Sbjct: 472 LFSAGLESRGLEGTGDDVAGDMGGKYAFPEGLAHHYVPCSLSTKPLAVLHLVLTMRFSRV 531
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L+ FG + + E+S
Sbjct: 532 LCFTNSRENSHRLFLLVQAFGG--VSVAEFS 560
>gi|403292279|ref|XP_003945289.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Saimiri boliviensis boliviensis]
Length = 553
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 206/394 (52%), Gaps = 55/394 (13%)
Query: 4 AKKKSMPVLP----WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
+KK++ V P W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ
Sbjct: 54 GRKKALKVQPFLPKWLAEPSCVRKNVTEDLVPIEDIPEVHPELQKQLRAHGISSYFPVQA 113
Query: 57 AVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 106
AV +G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALV
Sbjct: 114 AVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHVRALV 173
Query: 107 VLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 166
VLPT++LA QV VF A L V L GQ S+A E L+++
Sbjct: 174 VLPTKELAQQVSKVFNIYTDATPLRVSLITGQKSLAKEQDSLVQK-------------TA 220
Query: 167 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 226
+ DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 221 DGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA- 279
Query: 227 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 286
F P A L+ + V P L K++ SATLTQ+P KL QL
Sbjct: 280 ------FQSEDPAEPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQL 331
Query: 287 DLHHPLFLTTG-------ET-------RYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
LH P +TG ET +Y P L + + C KPL ++ L+ +G
Sbjct: 332 GLHQPRLFSTGLAHRGPEETDGDRESGKYAFPAGLTHHYVPCSLSSKPLVVLHLVLEMGF 391
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S E++HRL L+ FG + + E+S
Sbjct: 392 SRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFS 423
>gi|118098682|ref|XP_415229.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Gallus gallus]
Length = 764
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 201/394 (51%), Gaps = 59/394 (14%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V + E+ P+ +P + P+L LQ GI S FPVQ A
Sbjct: 267 QKVQPFLPHWLAQPKLVQKRIKENLIPIRDVPGIHPKLLKKLQMNGIESFFPVQAEVIPA 326
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
V Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 327 VLQSASNGYLVGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTK 386
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV VF GL V L GQ S A E L++ K G C S
Sbjct: 387 ELAQQVSKVFNIYTDGTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------S 433
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
DI+VATPGRL DHI+ T GF+L L +L+VDE DR++ + +Q WL V++ EN
Sbjct: 434 LADIIVATPGRLADHISKTPGFSLTQLRFLIVDEADRMIDDMHQNWLNQVVKAA-FQAEN 492
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLH 289
F + G + C YP+ L K++ SATLTQDP KL QL L
Sbjct: 493 EAGSNMLFQRTKPGPVTAASCC----------YPQIPLQKLLFSATLTQDPEKLQQLGLF 542
Query: 290 HPLFLTT-----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
P T+ E +Y LPE L + C+ KPL L+ + +
Sbjct: 543 QPRLFTSVYSEKKTLRDGTETKEDCEEKYTLPEGLSQSYVPCDLNSKPLLLLHFMLTKKF 602
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S E++HRL L+ FG I + E+S
Sbjct: 603 TRVLCFTNSREASHRLFLLVQAFGG--ITVAEFS 634
>gi|336370797|gb|EGN99137.1| hypothetical protein SERLA73DRAFT_54272 [Serpula lacrymans var.
lacrymans S7.3]
Length = 514
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 188/375 (50%), Gaps = 62/375 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTL 84
L +++ L+ +GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL
Sbjct: 69 LSVKMRRRLKELGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTL 128
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+Y LPIV+TLS+R + LRALVVLPTRDL +QV++ F + GL VG A GQ S A E
Sbjct: 129 AYVLPIVETLSSRIITRLRALVVLPTRDLVMQVRETFEEVGKGRGLKVGTATGQHSFAHE 188
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
S+LI +DIL+ TPGRL+DH+N T F+L+HL +LV+D
Sbjct: 189 QSQLIA----------------DRSSGKIDILICTPGRLVDHMNGTPNFSLQHLRFLVID 232
Query: 205 ETDRLLREAYQAWLPTVLQLT-----------RSDNENRFSDASTFLPSAFGSLKTIRRC 253
E DRLL +++Q W+ V+ T R++ E F A P + I
Sbjct: 233 EADRLLAQSFQDWVARVVTATRPTTFPSSGTPRAEEEETFGCADGLAPPLLHAKYAIANT 292
Query: 254 GVERGFKD-KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------- 299
G+ D KP K++ SATL +DP KLA L L + +
Sbjct: 293 ---YGYMDEKPSSSCQKLLFSATLPRDPGKLAGLQLRDVKYFVVQKARGGREEGVLDVVM 349
Query: 300 -RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF--- 355
RY +P L + ++C S KPL L L+Q +VFT S EST RL L F
Sbjct: 350 ERYTMPATLREHMIVCASSEKPLVLFDLVQRHKVRNGLVFTKSAESTARLVRLFELFEKA 409
Query: 356 ----GELRIKIKEYS 366
G L + K YS
Sbjct: 410 VAGEGRLGVVAKAYS 424
>gi|441630929|ref|XP_004093170.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Nomascus leucogenys]
Length = 684
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 202/388 (52%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 83 KVQPFLPRWLAEPSCVRKNVTEDLVPIEDVPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 142
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 143 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 202
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 203 LAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 249
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+
Sbjct: 250 ADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDS 308
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ F ++ C P L K++ SATLTQ+P KL QL LH P
Sbjct: 309 ADPCALFQRRQAQAVTAASTC--------CPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 360
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 361 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 420
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 421 TNSRENSHRLFLLVQAFGG--VDVAEFS 446
>gi|154759257|ref|NP_778236.2| ATP-dependent RNA helicase DDX51 [Homo sapiens]
gi|229462978|sp|Q8N8A6.3|DDX51_HUMAN RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
Length = 666
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 203/397 (51%), Gaps = 52/397 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 293 LAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 339
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 392
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 393 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 450
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 451 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 510
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
T+S E++HRL L+ FG + + E+S RR
Sbjct: 511 TNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRR 545
>gi|297693497|ref|XP_002824054.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 2 [Pongo
abelii]
Length = 665
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 52/401 (12%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+A K S LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 168 KAPKVSPAFLPRWLTEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAV 227
Query: 59 WQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVL
Sbjct: 228 IPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVL 287
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PT++LA QV VF A L V L GQ S+A E L+++
Sbjct: 288 PTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADG 334
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
+ DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 335 YRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQ 393
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+E+ + F ++ C P L K++ SATLTQ+P KL QL L
Sbjct: 394 SEDPADPCALFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGL 445
Query: 289 HHPLFLTTGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
H P +TG T +Y P L + + C KPL ++ L+ +G +
Sbjct: 446 HQPRLFSTGLTHRGLEDTDGDGDSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSR 505
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
+ FT+S E++HRL L+ FG + + E+S RR
Sbjct: 506 VLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRR 544
>gi|296213300|ref|XP_002753212.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Callithrix jacchus]
Length = 797
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 201/388 (51%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 174 KVQPFLPKWLAEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 233
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 234 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHVRALVVLPTKE 293
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 294 LAQQVSRVFNIYTDATPLRVSLVTGQKSVAKEQESLVQK-------------TADGYRCL 340
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 341 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 393
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 394 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 451
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 452 LFSTGLAHRGPEETGGDRESGKYAFPVGLTHHYVPCSLSSKPLVILHLVLEMGFSRVLCF 511
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 512 TNSRENSHRLFLLVQAFGG--VDVAEFS 537
>gi|402888183|ref|XP_003907453.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Papio anubis]
Length = 656
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 200/388 (51%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 163 KVQPFLPRWLAEPSCVRKNVNEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 222
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 223 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 282
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 283 LAQQVSKVFNIYTDATPLRVSLITGQKSLAKEQESLVQK-------------TADGYRCL 329
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 330 ADIVVATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA------- 382
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 383 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 440
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 441 LFSTGLAHRGLENTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 500
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 501 TNSRENSHRLFLLVQAFGG--VDVAEFS 526
>gi|58264962|ref|XP_569637.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109595|ref|XP_776912.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259592|gb|EAL22265.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225869|gb|AAW42330.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 701
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 198/375 (52%), Gaps = 46/375 (12%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC------INSPTGSGKTLSYA 87
L ++ L +GI F VQ A+ + L C I++PTGSGKTL+Y
Sbjct: 224 ALSVNMRRRLNEIGIEDFFAVQAAMLPRLLPLQLIPSPYCPLPDYLISAPTGSGKTLAYT 283
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
+PI++ LS R + LRAL+VLPTRDL QV++ A++ GL++G GQ S A E +
Sbjct: 284 IPILEILSQRTICRLRALIVLPTRDLVFQVRETMEALSKGTGLTIGTVTGQHSFAQERKQ 343
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
L+ D + L S +DIL+ATPGRLMDH+ +T FTL+HL +LV+DE D
Sbjct: 344 LVA----------DLDTPLLGGSSKLDILIATPGRLMDHLASTPNFTLQHLRFLVIDEAD 393
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT--IRRCGV--ERGFKDKP 263
RLL +++Q WL VL TR E A +F + ++ + + CG+ +RG
Sbjct: 394 RLLNQSFQDWLTQVLAYTRPPVE---PIAPSFKRKPYDTVSSAFMEACGLVDKRGEWCDS 450
Query: 264 YPRLV-KMVLSATLTQDPNKLAQLDLHHPLFL-----------TTGETRYKLPERLESYK 311
P + K++ SATLT+DP+K+A L LHHP + T+ ++ LP L
Sbjct: 451 SPSICQKLLFSATLTRDPSKVAALSLHHPQYYIVQSSSVPALPTSVGEQFALPSSLSEKM 510
Query: 312 LICESKLKPLYLVALLQ--SLGEEKCIVFTSSVESTHRLCTLLNHF---------GELRI 360
LI LKPL L+ L+ ++ +VFT SVES RL LL F G R+
Sbjct: 511 LILPPALKPLNLIHLIHHSEFNVDRALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKRL 570
Query: 361 KIKEYSGLQRQSVRR 375
+++YSG R ++
Sbjct: 571 VVEQYSGETRAKDKK 585
>gi|291412934|ref|XP_002722733.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Oryctolagus
cuniculus]
Length = 507
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 201/389 (51%), Gaps = 59/389 (15%)
Query: 10 PVLP-WMRSPV----DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-- 62
P LP W+ P DVS PL+ +P + P L+ L+ GIS+ FPVQ AV
Sbjct: 16 PFLPGWLAEPSCVRKDVS-GNLTPLEDVPEVHPDLQRQLRAQGISAYFPVQAAVIPVVLE 74
Query: 63 -------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
+G G ++ RDLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA
Sbjct: 75 SAASGFLVGRGGYQPRDLCVSAPTGSGKTLAFVIPVVQALLHRVVCQIRALVVLPTKELA 134
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
QV VF A L V L GQ S+A E L++R + D
Sbjct: 135 QQVSKVFNIYTDATPLRVALVTGQRSLAKEQEGLVQR-------------TADGYRCLAD 181
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL--QLTRSDNENR 232
I+VATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ R +
Sbjct: 182 IVVATPGRLVDHIDQTPGFHLQQLRFLVIDEADRMVDSMHQSWLPRVVAAAFQREGPGDL 241
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
S P A + T R P L K++ SATLTQDP +L +L LH P
Sbjct: 242 CSVLQRSQPPAVTAASTCR-----------PQVPLQKLLFSATLTQDPERLQRLGLHQPR 290
Query: 293 FLTTGET---------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
++G+ +Y P L + + C + KPL ++ L+ L + +
Sbjct: 291 LFSSGQAHGGSRDGEERGGLAGKYDFPAGLTHHYVPCRLRSKPLVVLHLILELKFSRVLC 350
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYS 366
FT+S E++HRL L+ FG + + E+S
Sbjct: 351 FTNSRENSHRLFLLVQAFGG--VSVAEFS 377
>gi|355786666|gb|EHH66849.1| hypothetical protein EGM_03914, partial [Macaca fascicularis]
Length = 494
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 199/385 (51%), Gaps = 52/385 (13%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET--- 62
P LP W+ P V ++ +D P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 4 PFLPRWLAEPSCVRKNVNKDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPALLES 63
Query: 63 ------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA
Sbjct: 64 AACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQ 123
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV VF A L V L GQ S+A E L+++ + DI
Sbjct: 124 QVNKVFNIYTDATPLRVSLITGQKSLAKEQESLVQK-------------TADGFRCLADI 170
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 171 VVATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQS 223
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
P A + ++ V P L K++ SATLTQ+P KL QL LH P +
Sbjct: 224 EDPTDPCALLQRRQVQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFS 281
Query: 296 TGETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
TG R Y P L + + C KPL ++ L+ +G K + FT+S
Sbjct: 282 TGLARRGLEDTDGDGDLGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCFTNS 341
Query: 342 VESTHRLCTLLNHFGELRIKIKEYS 366
E++HRL L+ FG + + E+S
Sbjct: 342 RENSHRLFLLVQAFGG--VDVAEFS 364
>gi|397487104|ref|XP_003814650.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Pan paniscus]
Length = 529
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 203/397 (51%), Gaps = 52/397 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GIS FPVQ AV
Sbjct: 36 KVQPFLPRWLAEPNCVRKNVTEDLVPIEDIPDVHPDLQKQLRAHGISFYFPVQAAVIPAL 95
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 96 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 155
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 156 LAQQVSKVFNIYTDATSLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 202
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+
Sbjct: 203 ADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDP 261
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ F ++ C P L K++ SATLTQ+P KL QL LH P
Sbjct: 262 ADPCALFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPR 313
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 314 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 373
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
T+S E++HRL L+ FG + + E+S RR
Sbjct: 374 TNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRR 408
>gi|21756727|dbj|BAC04942.1| unnamed protein product [Homo sapiens]
gi|326205429|dbj|BAJ84089.1| ATP-dependent RNA helicase DDX51 [Homo sapiens]
Length = 666
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 202/397 (50%), Gaps = 52/397 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+ E L+++ +
Sbjct: 293 LAQQVSKVFNIYTDATPLRVSLVTGQKSLVKEQESLVQK-------------TADGYRCL 339
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 392
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 393 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 450
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 451 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 510
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
T+S E++HRL L+ FG + + E+S RR
Sbjct: 511 TNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRR 545
>gi|410976432|ref|XP_003994624.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Felis catus]
Length = 538
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 200/398 (50%), Gaps = 64/398 (16%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV----WQE 61
P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV +
Sbjct: 16 PFLPSWLAEPSCVGKSVTEDSVPIEDIPAVHPDMQKQLRAHGISSYFPVQAAVIPALLES 75
Query: 62 TIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
T L R DLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++LA
Sbjct: 76 TANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLCRAVCQVRALVVLPTKELAQ 135
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV VF A L V L GQ S+ E L++R + D+
Sbjct: 136 QVSKVFNVYTDATPLRVALITGQKSLVKEQETLVQR-------------TADGFRCLADV 182
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR--- 232
+VATPGRL+DHI+ T GF+L HL +LV+DE DR++ +Q+WLP V++ + +
Sbjct: 183 VVATPGRLVDHIDQTPGFSLRHLRFLVIDEADRMIDSMHQSWLPRVVEAAFPSDSAKDPC 242
Query: 233 ----------FSDASTFLPSAFGSLKTIRRCGVERGFKDK---------PYPRLVKMVLS 273
+ A LP + + C ++G + P L K++ S
Sbjct: 243 ALLQRRQLRATTAARPALPWRVPGGQVQQVCRPDQGRRPTARSPSSTCCPQMPLQKLLFS 302
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETR---------------YKLPERLESYKLICESKL 318
ATLTQ+P KL QL LH P +TG R Y P L + C +
Sbjct: 303 ATLTQNPEKLQQLGLHQPRLFSTGLARGGPKDADADGDSGGKYTFPAGLSHCYVPCSLRT 362
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
KPL ++ L+ + + + FT+S E++HRL L+ FG
Sbjct: 363 KPLVILHLILEMNFSRVLCFTNSRENSHRLFLLVQAFG 400
>gi|321253768|ref|XP_003192843.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317459312|gb|ADV21056.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 702
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 192/367 (52%), Gaps = 64/367 (17%)
Query: 43 LQNMGISSLFPVQVAVW------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
L+++G+ F VQ A+ Q P D I++PTGSGKTL+YA+PI++ LS
Sbjct: 234 LKDIGVEDFFAVQAAMLPRLLPLQLIPSPYSSLPDYLISAPTGSGKTLAYAIPIIEILSQ 293
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
R V LRAL+VLPTRDL QV++ A++ GL++G GQ S A E +L+
Sbjct: 294 RTVCRLRALIVLPTRDLVFQVRETMEALSKGTGLTIGTVTGQHSFAQERKQLVA------ 347
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
D E L S +DIL+ATPGRLMDH+ +T FTL+HL +LV+DE DRLL +++Q
Sbjct: 348 ----DLETPLLGGSSKLDILIATPGRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQN 403
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF--------KDKPY---- 264
WL VL TR E +P +F K V F KD +
Sbjct: 404 WLTQVLAYTRPPIEP--------IPPSF---KRKPHDTVSSAFMEACSLIDKDGEWCDSS 452
Query: 265 PRLV-KMVLSATLTQDPNKLAQLDLHHPLFL------------TTGETRYKLPERLESYK 311
P + K++ SATLT+DP+K+A L LHHP + + GE ++ LP L
Sbjct: 453 PSICQKLLFSATLTRDPSKIAALSLHHPQYYIVQSSIAPALPTSVGE-QFALPSSLSEKM 511
Query: 312 LICESKLKPLYLVALLQ--SLGEEKCIVFTSSVESTHRLCTLLNHF---------GELRI 360
LI LKPL L+ L+ ++ +VFT SVES RL LL F G R+
Sbjct: 512 LIVPPALKPLNLIHLVHHSEFNVDRALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKRL 571
Query: 361 KIKEYSG 367
+++YSG
Sbjct: 572 AVEQYSG 578
>gi|410047553|ref|XP_003954509.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Pan troglodytes]
Length = 497
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 198/380 (52%), Gaps = 51/380 (13%)
Query: 14 WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-------- 62
W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 12 WLAEPXCVRKNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPALLESAACGF 71
Query: 63 -IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA QV V
Sbjct: 72 LVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQQVSKV 131
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A L V L GQ S+A E L+++ + DI+VATP
Sbjct: 132 FNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATP 178
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ + F
Sbjct: 179 GRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCALFQ 237
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--- 297
++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 238 RRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAH 289
Query: 298 -----------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
+Y P L + + C KPL ++ L+ +G + + FT+S E++H
Sbjct: 290 RGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSH 349
Query: 347 RLCTLLNHFGELRIKIKEYS 366
RL L+ FG + + E+S
Sbjct: 350 RLFLLVQAFGG--VDVAEFS 367
>gi|405123262|gb|AFR98027.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. grubii
H99]
Length = 718
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 196/371 (52%), Gaps = 48/371 (12%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYA 87
L ++ L +G+ F VQ A+ + L D I++PTGSGKTL+Y
Sbjct: 241 ALSVNMRRRLNEIGVEDFFAVQAAMLPRLLPLQLIPSPYSPLPDYLISAPTGSGKTLAYT 300
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
+PI++ LS R V LRAL++LPTRDL QV++ A++ GL++G GQ S A E +
Sbjct: 301 IPIIEILSQRTVCRLRALIILPTRDLVFQVRETMEALSKGTGLTIGTVTGQHSFAQERKQ 360
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
L+ D + L S +DIL+ATPGRLMDH+ +T FTL+HL +LV+DE D
Sbjct: 361 LVA----------DLDTPLLGGSSKLDILIATPGRLMDHLASTPNFTLQHLRFLVIDEAD 410
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT--IRRCGVERGFKD--KP 263
RLL +++Q WL VL TR E A +F + ++ + + CG+ ++
Sbjct: 411 RLLNQSFQDWLTQVLAYTRPPVE---PIAPSFKRKPYDTVSSAFMEACGLVNKSEEWCDS 467
Query: 264 YPRLV-KMVLSATLTQDPNKLAQLDLHHPLFL------------TTGETRYKLPERLESY 310
P + K++ SATLT+DP+K+A L LHHP + + GE ++ LP L
Sbjct: 468 SPSICQKLLFSATLTRDPSKVAALSLHHPQYYIVQSSSAPALPTSVGE-QFALPSSLSEK 526
Query: 311 KLICESKLKPLYLVALLQ--SLGEEKCIVFTSSVESTHRLCTLLNHF---------GELR 359
LI LKPL L+ L+ ++ +VFT SVES RL LL F G R
Sbjct: 527 MLILPPALKPLNLIHLIHHPEFNVDRALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKR 586
Query: 360 IKIKEYSGLQR 370
+ I++YSG R
Sbjct: 587 LVIEQYSGEMR 597
>gi|355683374|gb|AER97086.1| DEAD box polypeptide 51 [Mustela putorius furo]
Length = 474
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 184/357 (51%), Gaps = 47/357 (13%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLF-------ERDLCI 74
+ P++H+P + P ++ L+ GISS FPVQ AV E+ G RDLC+
Sbjct: 4 DSVPIEHIPAVHPDMQKKLRAHGISSYFPVQAAVIPALLESTADGFLVARGGYRPRDLCV 63
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
++PTGSGKTL++ +P+VQ L RA+ +RALVVLPT++LA QV VF A L V L
Sbjct: 64 SAPTGSGKTLAFVIPVVQALLGRAICQVRALVVLPTKELAQQVCKVFNIYTDATPLRVAL 123
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
GQ S+ E L+++ + D++VATPGRL+DHI+ T GF+
Sbjct: 124 ITGQKSLVKEQESLVQK-------------TADGFRCLADVVVATPGRLVDHIDQTPGFS 170
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
L HL +LV+DE DR++ +Q+WLP V+ E F P F L+ +
Sbjct: 171 LLHLRFLVIDEADRMIDSMHQSWLPRVV-------EAAFPSDGAKDP--FVLLQRRQPQA 221
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-------------- 300
P L K++ SATLTQ+P KL QL LH P +TG R
Sbjct: 222 PTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLHQPWLFSTGLARRDPGDSDADRDSGG 281
Query: 301 -YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y P L + + C + KPL ++ L+ + + FT+S E++HRL L+ FG
Sbjct: 282 KYAFPAGLSHHYVPCSLRTKPLAILHLILEKNFSRVLCFTNSRENSHRLFLLVQAFG 338
>gi|223999483|ref|XP_002289414.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220974622|gb|EED92951.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 494
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 178/319 (55%), Gaps = 45/319 (14%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSN--------RAVRCLRALVVLPTRDLALQVKDVF 121
RD+C ++PTGSGKTL++ LP++ L N R R LRALVVLP RDLA QV DVF
Sbjct: 19 RDVCCHAPTGSGKTLAFVLPLLTALYNESPGQSCTRGFRRLRALVVLPGRDLAKQVHDVF 78
Query: 122 AAIAPAVGLSVGLAVG----QSSIADEISELIK---RPKLEAGICYDPEDVLQELQSAVD 174
A L +GLAVG +S + E L+ + + GI PE QSAVD
Sbjct: 79 VRYAKGSHLKIGLAVGGGKKKSDLVYERRSLVAYDGTTRRDNGIQVFPE---FGGQSAVD 135
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
ILVATPGRLMDH+++T GFTL+HL +LV+DE DRL+ + YQ W+ VL+ S++ NRF
Sbjct: 136 ILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEA--SNSSNRFG 193
Query: 235 DASTFLPSAFGSLKTIRRCGVE--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ +P K G E G +P P L KM+ SATLTQDP KLA L L +P
Sbjct: 194 SS---VPVVRHGEKDQANTGGELVSGMFGRPVP-LRKMLFSATLTQDPQKLAVLGLKNPK 249
Query: 293 FLTTGETR------YKLPERLESYKLICESKLKPLYLVALL--------QSLGE-----E 333
+ Y +PE L + C ++ KP+ L+ALL S G+
Sbjct: 250 HFDANQVENIKAGSYSVPEGLTERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVN 309
Query: 334 KCIVFTSSVESTHRLCTLL 352
IVFTSSV+STHRL LL
Sbjct: 310 LSIVFTSSVDSTHRLARLL 328
>gi|426374738|ref|XP_004054220.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Gorilla gorilla
gorilla]
Length = 641
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 200/388 (51%), Gaps = 52/388 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
+ P LP W+ P V ++ ED P++ + + P L+ L+ GISS FPVQ AV
Sbjct: 148 RVQPFLPRWLAEPNCVRKNVTEDLVPVEDIRDVHPDLQKQLRAHGISSYFPVQAAVIPAL 207
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 208 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 267
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 268 LAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 314
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 315 ADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA------- 367
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 368 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 425
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 426 LFSTGLAHRGLEDTDGDRDSGKYTFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCF 485
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYS 366
T+S E++HRL L+ FG + + E+S
Sbjct: 486 TNSRENSHRLFLLVQAFGG--VDVAEFS 511
>gi|426199228|gb|EKV49153.1| hypothetical protein AGABI2DRAFT_201250 [Agaricus bisporus var.
bisporus H97]
Length = 602
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 184/376 (48%), Gaps = 72/376 (19%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTG 79
D+ L +++ L +GI+ LF VQ A+ I + RD+CI++PTG
Sbjct: 113 DNSTHLSEKMRRRLHGLGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTG 172
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
SGKTL+YALPIV+ LS+R + LRAL++LPTRDL QV++ F + GL +G A GQ
Sbjct: 173 SGKTLAYALPIVEILSSRVLTQLRALIILPTRDLVAQVRETFEVLGKGRGLKIGTATGQH 232
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
S A E S+L+ D L S VDIL+ TPGRL+DH+N T FTL+HL
Sbjct: 233 SFAHEQSQLVN----------DQTSSLLGGSSRVDILICTPGRLIDHMNGTPNFTLQHLR 282
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNE---------NRFSDASTFLPSAFGSLKTI 250
+LV+DE DRLL +++Q WL VL R + T P L
Sbjct: 283 FLVIDEADRLLAQSFQDWLAQVLAALRPHRTPNCVPGTQVDSIPHPDTVAPYLLHRL--- 339
Query: 251 RRCGVERGFKDKPYPRL------------VKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
PYP K++ SATLT+DP K+A L+L P + +
Sbjct: 340 ------------PYPHYPTFLTEVHESSCQKLLFSATLTRDPGKIASLELREPKYFIVQK 387
Query: 299 TR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 343
+R + +P L+ + L+CES KPL L+ L +VFT S E
Sbjct: 388 SRESDGQDRILSVVMEKFSIPSTLK-HMLVCESSQKPLMFFHLVFHLNVTDALVFTKSSE 446
Query: 344 STHRLCTLLNHFGELR 359
ST RL L + F + R
Sbjct: 447 STARLVRLFDFFQKWR 462
>gi|358055147|dbj|GAA98916.1| hypothetical protein E5Q_05604 [Mixia osmundae IAM 14324]
Length = 2128
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 186/371 (50%), Gaps = 46/371 (12%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGK 82
+ P L P L + LQ G+ +LF VQ+A Q +G P RDLC+N+PTGSGK
Sbjct: 306 NAPLLSPTLLIRLQEQGLETLFAVQMATCQHILGTEQTRSLYPRYPPRDLCVNAPTGSGK 365
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y LPIVQ LS V +RAL++LPTRDL QVKD F L +G A G S
Sbjct: 366 TLAYVLPIVQMLSTTIVTRMRALIILPTRDLVTQVKDTFEIYCKGTSLRIGTATGSQSFK 425
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
E +A + D S VDIL+ATPGRL+DH+ + +L+HL +LV
Sbjct: 426 KE----------QAILVGDSAHYYPGGSSKVDILIATPGRLIDHLTQSPNLSLQHLRFLV 475
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG---F 259
+DE DRLL +++Q WL V R S+ + LP A + +++
Sbjct: 476 MDEADRLLNQSFQDWLQVVQAHLRYPPPT--SEDAAELPLAGDASAAPHVLALQQATTSM 533
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------------YKLPERL 307
+ P L +++ SATL++DP +++ L+L +P+F+ E R + LP L
Sbjct: 534 SETPIQPLQQILCSATLSRDPRQVSALNLRNPVFVAVREARDDQMDELETEDNFALPATL 593
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-----------G 356
+ + L+ S KPL L LL + + FT SVES RL L+ F
Sbjct: 594 KEHMLVTSSGSKPLMLFYLLHAKSLSNVLCFTKSVESAQRLAKLVELFETEYASRSEGAD 653
Query: 357 ELRIKIKEYSG 367
K+KE+SG
Sbjct: 654 NQGFKVKEFSG 664
>gi|354479142|ref|XP_003501772.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Cricetulus
griseus]
Length = 552
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 203/389 (52%), Gaps = 53/389 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 58 KVQPFLPTWLAEPSCVKKSVTEDLTPIEDIPGVHPDLQKQLRANGISSYFPVQAAVIPAL 117
Query: 59 WQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T +G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 118 LESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 177
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ + +
Sbjct: 178 LAQQVSKVFNIYTDATPLRVALVTGQKSLAKEQESLVQK-------------TVDGYRCL 224
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DILVATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E
Sbjct: 225 ADILVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGP 283
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ + ++ T C F P L K++ SATLTQ+P KL +L L+ P
Sbjct: 284 SGSCALLQRTQPQAVTTASTC-----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPR 335
Query: 293 FLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
+T +Y P L + + C KPL ++ L+ + + +
Sbjct: 336 LFSTRLGHKGPKDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALC 395
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYS 366
FT+S E +HRL L FG + + E+S
Sbjct: 396 FTNSREHSHRLFLLAQAFGG--VSVAEFS 422
>gi|344246330|gb|EGW02434.1| ATP-dependent RNA helicase DDX51 [Cricetulus griseus]
Length = 605
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 203/389 (52%), Gaps = 53/389 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 111 KVQPFLPTWLAEPSCVKKSVTEDLTPIEDIPGVHPDLQKQLRANGISSYFPVQAAVIPAL 170
Query: 59 WQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T +G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 171 LESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 230
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ + +
Sbjct: 231 LAQQVSKVFNIYTDATPLRVALVTGQKSLAKEQESLVQK-------------TVDGYRCL 277
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DILVATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E
Sbjct: 278 ADILVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGP 336
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ + ++ T C F P L K++ SATLTQ+P KL +L L+ P
Sbjct: 337 SGSCALLQRTQPQAVTTASTC-----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPR 388
Query: 293 FLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
+T +Y P L + + C KPL ++ L+ + + +
Sbjct: 389 LFSTRLGHKGPKDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALC 448
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYS 366
FT+S E +HRL L FG + + E+S
Sbjct: 449 FTNSREHSHRLFLLAQAFGG--VSVAEFS 475
>gi|409078236|gb|EKM78599.1| hypothetical protein AGABI1DRAFT_74928 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 602
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 187/373 (50%), Gaps = 66/373 (17%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTG 79
D+ L +++ L +GI+ LF VQ A+ I + RD+CI++PTG
Sbjct: 113 DNSTHLSEKMRRRLHGLGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTG 172
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
SGKTL+YALPIV+ LS+R + LRAL++LPTRDL QV++ F + GL +G A GQ
Sbjct: 173 SGKTLAYALPIVEILSSRILTQLRALIILPTRDLVAQVRETFEVLGKGRGLKIGTATGQH 232
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
S A E S+L+ D L S VDIL+ TPGRL+DH+N T FTL+HL
Sbjct: 233 SFAHEQSQLVN----------DQTSSLLGGSSKVDILICTPGRLIDHMNGTPNFTLQHLR 282
Query: 200 YLVVDETDRLLREAYQAWLPTVLQL------------TRSDNENRFSDASTFL------P 241
+LV+DE DRLL +++Q WL VL TR D+ S +L P
Sbjct: 283 FLVIDEADRLLAQSFQDWLAQVLTALRPHRTQNCVPGTRVDSIPHPDTVSPYLLHRLPFP 342
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 299
L + + K++ SATLT+DP K+A L+L P + ++
Sbjct: 343 HYSTFLTEVHESSCQ------------KLLFSATLTRDPGKIASLELREPKYFIVQKSSE 390
Query: 300 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
++ +P L+ + L+CES KPL L+ L +VFT S EST
Sbjct: 391 SDGQDHILSVVMEKFSIPSTLK-HMLVCESSQKPLMFFHLVFHLNVTDALVFTKSSESTA 449
Query: 347 RLCTLLNHFGELR 359
RL L + F + R
Sbjct: 450 RLVRLFDFFQKWR 462
>gi|157820497|ref|NP_001100620.1| ATP-dependent RNA helicase DDX51 [Rattus norvegicus]
gi|149063713|gb|EDM14036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 601
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 200/392 (51%), Gaps = 59/392 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 141 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGISSYFPVQAAVIPAL 200
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 201 LESADNGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 260
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ S+A E L++ K G C
Sbjct: 261 LAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQ--KTADGFC-----------CL 307
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 308 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA--------- 358
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A+ + GS ++R V P L K++ SATLTQ+P KL +L L+
Sbjct: 359 ---AAFYTEDPTGSCALLQRTQPQAVTAASTCIPQMPLQKLLFSATLTQNPEKLQRLGLY 415
Query: 290 HPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
P +T +Y P L + + C KPL + L+ + +
Sbjct: 416 QPRLFSTRLGHQSPRDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVFHLVLGMNFSR 475
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L FG + + E+S
Sbjct: 476 ALCFTNSRENSHRLFLLAQAFGG--VSVAEFS 505
>gi|389750259|gb|EIM91430.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 725
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 183/375 (48%), Gaps = 71/375 (18%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFER----------DLCINSPTGSGKTLSYALPIVQ 92
L+ +GI LF VQ + + G F+R D+C+++PTGSGKTL+Y LPI++
Sbjct: 260 LKELGIEELFAVQTTLLPLLLPSGPFKRSLYLPYDPPQDICVSAPTGSGKTLAYVLPIIE 319
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
LS R V LRAL+VLPTRDL QV++ F AI GL +G A GQ S A E ++L
Sbjct: 320 ILSARIVTRLRALIVLPTRDLVTQVRETFEAIGKGRGLKIGTATGQHSFAHEQNQL---- 375
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V + VD+L+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +
Sbjct: 376 ------------VADKSAHKVDVLICTPGRLIDHLNGTPNFSLQHLRFLVIDEADRLLAQ 423
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSA----FGSLKTIRRCGVERGFKDKPYPRLV 268
++Q WL VL TR T PSA GS + G++ + D P +
Sbjct: 424 SFQDWLAQVLAATRP------PPVPTHDPSAPASTSGSFTVPQDNGIDIPYPDALSPSFL 477
Query: 269 -----------------------KMVLSATLTQDPNKLAQLDLHHPLFL-----TTGE-- 298
K++ SATL DP K+ L+L ++ GE
Sbjct: 478 HLLRPPSFAMITDIDTPRESSCQKLLFSATLMSDPGKIKALELRDAKYIVVQGQANGEGV 537
Query: 299 -----TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
R+ +P L + L+ S KPL L L+ + + +VFT S EST RL L
Sbjct: 538 LGVVMERFSMPATLTEHMLVVPSSQKPLMLFHLVHAHNVKNALVFTKSAESTGRLVRLFQ 597
Query: 354 HFGELRIKIKEYSGL 368
F RI+ + S +
Sbjct: 598 FFERARIQAQSQSSM 612
>gi|148688064|gb|EDL20011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 200/392 (51%), Gaps = 59/392 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ S+A E L+++ +
Sbjct: 265 LAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCL 311
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 312 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA--------- 362
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A+ + GS ++R V P L K++ SATLTQDP KL +L L+
Sbjct: 363 ---AAFYSEGPTGSCALLQRTQPQAVTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLY 419
Query: 290 HPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
P +T +Y P L + + C KPL ++ L+ + +
Sbjct: 420 QPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSR 479
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L FG + + E+S
Sbjct: 480 ALCFTNSRENSHRLYLLAQAFGG--VSVAEFS 509
>gi|164656042|ref|XP_001729149.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
gi|159103039|gb|EDP41935.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
Length = 730
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 185/370 (50%), Gaps = 47/370 (12%)
Query: 18 PVDV----SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---------WQETIG 64
P DV +L D P H L P + L+ +GI F VQ AV
Sbjct: 201 PTDVATTNTLALDTPNTHGVRLSPPVHRQLEQLGIREWFAVQGAVIPALLRDVHAHHLYL 260
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
P RDLCI++PTGSGKTL+Y +PI++ L R + LRAL+++PTRDLA+QV+DV A+
Sbjct: 261 PYAPPRDLCISAPTGSGKTLAYVVPIIEVLHKRTIPQLRALILVPTRDLAVQVRDVLEAV 320
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
GL + G S E +L++ DV +S DIL+ATPGRL+
Sbjct: 321 GKGSGLRYAMITGNHSFRHEQDQLVR----------SDSDV---NRSPTDILIATPGRLV 367
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
DH+ TRGFTLEHL YLV+DE DRLL +++Q W+PT+L E R + PS +
Sbjct: 368 DHLRGTRGFTLEHLRYLVIDEADRLLGQSFQQWVPTLLDAL----EPRPHSGTCAPPSLW 423
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT--------- 295
R P + K++ SATLT+DP K+ L L P F+
Sbjct: 424 EEAGQEHNHTWTRDDMQVPQASVQKLLFSATLTRDPAKVGALRLRQPQFIRVRDPGISDG 483
Query: 296 ---TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-----KCIVFTSSVESTHR 347
E + LP L+ + L+ + K LYL+ LL + + + FT SVE+ +R
Sbjct: 484 QGLVHEQHFALPAGLQQHMLVAPTSQKVLYLLHLLHTPSADTEPLRHALCFTKSVETANR 543
Query: 348 LCTLLNHFGE 357
L L+ F E
Sbjct: 544 LVRLVAFFEE 553
>gi|348550777|ref|XP_003461207.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX51-like [Cavia porcellus]
Length = 677
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 204/398 (51%), Gaps = 53/398 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ +P V ++ +D P++ +P + P L+ L+ GIS+ FPVQ AV
Sbjct: 183 KVQPFLPAWLANPSCVKKNVTKDLVPIEDIPEVHPDLQKQLRAHGISAYFPVQAAVIPAV 242
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 243 LESSASGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 302
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ +A E L+++ +
Sbjct: 303 LAQQVSRVFNVYTDATPLRVALVTGQKPLAKEQESLVQK-------------TADGYRCL 349
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T+GF+L+ L +L+VDE DR++ +Q+WLP V+
Sbjct: 350 ADIVVATPGRLVDHIDQTQGFSLQQLRFLIVDEADRMIDSMHQSWLPRVMAAA------- 402
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P+ L+ R V P L K++ SATLTQ+P KL +L L+ P
Sbjct: 403 FPCEGPTDPATL--LQRRRAPAVTAASTCCPQMPLQKLLFSATLTQNPEKLQRLGLYLPR 460
Query: 293 FLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
+T E +Y P L + + C KPL ++ L+ + + +
Sbjct: 461 LFSTRLAHRALEDDTAGGDPEGKYAFPSGLTHHYVPCSLNAKPLAIIHLVLGMSISRTLC 520
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
FT+S E++HRL L+ FG + + E+S RR
Sbjct: 521 FTNSRENSHRLFLLVQAFGG--VSVAEFSACYGPGHRR 556
>gi|390348197|ref|XP_797208.3| PREDICTED: uncharacterized protein LOC592601 [Strongylocentrotus
purpuratus]
Length = 997
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 208/414 (50%), Gaps = 78/414 (18%)
Query: 14 WMRSP--VDVSLFEDC-PLDHLPCLDPRLKVALQNMGISSLFPVQ---VAVWQETIGPGL 67
W+ P + SL D P++ + LD RL AL MG+ FPVQ + V E++ G+
Sbjct: 314 WLARPSVIQQSLTNDLQPVNSIKGLDERLVTALAYMGVEKFFPVQQHVIPVLLESLRDGI 373
Query: 68 FE-------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
RDLCI++PTGSGKTL+YA+PI+Q L NR V +RALVVLPTRDLA QV +
Sbjct: 374 HTGHAGYRPRDLCISAPTGSGKTLAYAIPIIQALMNRVVCRVRALVVLPTRDLATQVYKI 433
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
+A+ A L L G A E S L++ ++ EL S DI+VATP
Sbjct: 434 ISALCKATPLKPVLIGGTKKFAQEQSLLVR-------------EIDGELHSLADIVVATP 480
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+D+I+ T GF L+HL +LV+DE DRL+ Q W+ V + + D T L
Sbjct: 481 GRLVDNISQTAGFNLQHLRFLVIDEADRLMEHISQDWIAQVEKSAYTP----LYDNGTTL 536
Query: 241 PSAFGSLK-----TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
P+ + + TI R F+ P L K++ SATL+Q+P KL QL L P +T
Sbjct: 537 PTFTSNRQRPGPLTINRSS---SFQ---LP-LQKLLFSATLSQNPEKLTQLRLFQPRLIT 589
Query: 296 TGET----------------------------------RYKLPERLESYKLICESKLKPL 321
T + +Y P L Y + C + KPL
Sbjct: 590 TATSSRAPPISAWHLDGEKEGVKEEGKEKDEGRTDFVGKYTTPVGLSEYFVQCTAGEKPL 649
Query: 322 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
L L +L ++ + FT+SV++THRL LL G+ +++ E+S QS R+
Sbjct: 650 VLQHFLLNLYFKQVLCFTNSVQTTHRLYLLLKLMGD--VEVSEFSSNLSQSERQ 701
>gi|40538825|ref|NP_081432.2| ATP-dependent RNA helicase DDX51 [Mus musculus]
gi|81892367|sp|Q6P9R1.1|DDX51_MOUSE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|38614333|gb|AAH60646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 200/392 (51%), Gaps = 59/392 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ S+A E L+++ +
Sbjct: 265 LAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCL 311
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 312 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA--------- 362
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A+ + GS ++R + P L K++ SATLTQDP KL +L L+
Sbjct: 363 ---AAFYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLY 419
Query: 290 HPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
P +T +Y P L + + C KPL ++ L+ + +
Sbjct: 420 QPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSR 479
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L FG + + E+S
Sbjct: 480 ALCFTNSRENSHRLYLLAQAFGG--VSVAEFS 509
>gi|74220751|dbj|BAE31347.1| unnamed protein product [Mus musculus]
Length = 639
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 200/392 (51%), Gaps = 59/392 (15%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ S+A E L+++ +
Sbjct: 265 LAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCL 311
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 312 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA--------- 362
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A+ + GS ++R + P L K++ SATLTQDP KL +L L+
Sbjct: 363 ---AAFYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLY 419
Query: 290 HPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
P +T +Y P L + + C KPL ++ L+ + +
Sbjct: 420 QPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSR 479
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E++HRL L FG + + E+S
Sbjct: 480 ALCFTNSRENSHRLYLLAQAFGG--VSVAEFS 509
>gi|351698593|gb|EHB01512.1| ATP-dependent RNA helicase DDX51, partial [Heterocephalus glaber]
Length = 536
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 206/402 (51%), Gaps = 68/402 (16%)
Query: 4 AKKKSMPV---LP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
A++K+ V LP W+ +P V ++ +D P++ +P + P L+ L+ GISS FPVQ
Sbjct: 40 ARRKAAKVQLFLPMWLANPSCVKKNVTKDLVPIEDIPEVHPDLQKQLRARGISSYFPVQA 99
Query: 57 AVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 106
AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALV
Sbjct: 100 AVIPALLENAASGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHVRALV 159
Query: 107 VLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 166
+LPT++LA QV VF A L V L GQ +A E L+++
Sbjct: 160 MLPTKELAQQVSKVFNIYTDATPLRVALVTGQKPLATEQESLVQK-------------TA 206
Query: 167 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 226
+ DI+VATPGRL+DHIN T GF+L+ L +LVVDE DR++ +Q+WLP V+
Sbjct: 207 DGFRCLADIVVATPGRLVDHINQTPGFSLQQLRFLVVDEADRMIDSMHQSWLPRVM---- 262
Query: 227 SDNENRFSDASTFLPSAFGS-----LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
+ LPS + L+ R V P L K++ SATLTQ+P
Sbjct: 263 ----------AAALPSKGPADPCALLQRWRPQAVTAASACCPQMPLQKLLFSATLTQNPE 312
Query: 282 KLAQLDLHHPLFLTT-----------------GETRYKLPERLESYKLICESKLKPLYLV 324
KL QL L+ P +T E +Y P L + + C KPL ++
Sbjct: 313 KLQQLGLYQPRLFSTRLAHRVPKDEGTEVDRDPEGKYTFPAGLTHHYVPCSLSSKPLAIM 372
Query: 325 ALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
L+ + + FT+S E++HRL LL FG + + E+S
Sbjct: 373 HLVVGKNFSRALCFTNSRENSHRLFLLLQAFGG--VSVAEFS 412
>gi|443730193|gb|ELU15819.1| hypothetical protein CAPTEDRAFT_183322 [Capitella teleta]
Length = 576
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 184/384 (47%), Gaps = 50/384 (13%)
Query: 5 KKKSMPVLP-WMRSPVDVS---LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
++K VLP W+ +S E CPL LD RL L+ G+ FPVQ +
Sbjct: 86 QEKVSRVLPDWLTKTTSISSDIKSERCPLAETADLDERLITLLEKNGVKDFFPVQARLIP 145
Query: 61 ETIGP------------GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
T+ G DLC ++ TGSGKTL+Y +PIVQ LS R V +RALVVL
Sbjct: 146 ATMNSFDKQFPYALTKGGFRPSDLCCSAATGSGKTLAYVVPIVQALSRRVVPAIRALVVL 205
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
P RDLA QV VF L V L G S +E ++ P
Sbjct: 206 PVRDLAQQVYKVFCTYCAGTNLKVVLTAGYKSFENEQQQMTFGP--------------NG 251
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
+ DI++ TPGRL+DH+ T+GF L L +LV+DE DRL++E W VL++ +
Sbjct: 252 TKCPADIVITTPGRLVDHLIETKGFCLNELRFLVIDEADRLMKEFKFDW---VLKVENAV 308
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ + + T G + C G+ D P+ L K++ SATL+Q+P L Q+ L
Sbjct: 309 YHHTYDTSVT-----SGHRFSPNLCSAA-GYDDYPHVGLQKLLFSATLSQNPEVLQQMRL 362
Query: 289 HHPLFLTTGE-----------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
P T E +Y P L + CE KPL L L+ + + +
Sbjct: 363 FQPRLFTASEGTDESSQMESINKYVTPASLNEMFIKCEENTKPLVLFHLIHTRKYRQVLC 422
Query: 338 FTSSVESTHRLCTLLNHFGELRIK 361
FT+SV+STHRLCTLL G++ ++
Sbjct: 423 FTNSVKSTHRLCTLLRLMGKVSVE 446
>gi|170098937|ref|XP_001880687.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644212|gb|EDR08462.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 510
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 191/356 (53%), Gaps = 48/356 (13%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTL 84
L +++ L+++GI+ LF VQ ++ + + L+ RD+CI++PTGSGKTL
Sbjct: 69 LSAKIRKRLKSIGITELFAVQTSLLPFLLPHDPLARRLYLPYDPPRDVCISAPTGSGKTL 128
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+Y LPIV+TLS R V LRALVVLPTRDL QV++ F AI GL +G A GQ+S A E
Sbjct: 129 AYVLPIVETLSPRIVTRLRALVVLPTRDLVSQVRETFEAITNNRGLKIGTATGQNSFAHE 188
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
++L+ L S VDIL+ TPGRLMDH+ T F+L+HL +LV+D
Sbjct: 189 QAQLVN----------------NVLPSKVDILICTPGRLMDHLMGTPNFSLQHLRFLVID 232
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF---------LPSAFGSLKTIRRCGV 255
E DRLL +++Q WL VL TR ++ S +S L AF L+ + +
Sbjct: 233 EADRLLAQSFQDWLSRVLAATRPHVKSSSSSSSPSPHSLPESDGLSPAF--LQRLSLPDI 290
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-----TTGE-----TRYKLPE 305
++ K++ SATLT+DP K+A L+L P + T GE Y +P
Sbjct: 291 PAFQHEEKETSCQKLLFSATLTRDPAKIAALNLRDPKYFIVQSRTDGEELHVLENYSMPP 350
Query: 306 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
L ++ ++ S KPL L+ +VFT S +ST RL L F E R++
Sbjct: 351 TL-THMIVSNSSKKPLVFFHLIHRQKMRNVLVFTKSADSTTRLVRLFEFFEEARLE 405
>gi|353239546|emb|CCA71453.1| related to DBP6-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 1596
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 177/360 (49%), Gaps = 53/360 (14%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAV--------------WQETIGPGLFERDLCINSPTGS 80
L R+ L ++GI LF VQ + +Q + P RD+C ++PTGS
Sbjct: 1103 LSSRMLRRLADLGIKELFAVQTVLLPFLLPEDLEQSMLYQPSHPP----RDVCASAPTGS 1158
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKTL+YA+PI + LS R V LRALVV+PTRDL QV++ F A L +G+A GQ S
Sbjct: 1159 GKTLAYAIPITEMLSTRIVTRLRALVVVPTRDLVQQVRETFEACGKGTKLQIGIATGQHS 1218
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
A E +A I D + +S VDIL+ TPGRL+DHIN T FTL+HL +
Sbjct: 1219 FAHE----------QAQIVGDISERSLGGRSRVDILICTPGRLIDHINGTPNFTLQHLRF 1268
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTR--SDNENRFS--DASTFLPSAFGSLKTIRRCGVE 256
LV+DE DRLL +++Q WL VL S N R S D S P G T V
Sbjct: 1269 LVIDEADRLLNQSFQEWLKQVLNAISLPSPNGPRLSEGDRSELFPVPDGIAPTWLSALVP 1328
Query: 257 RGFKD---KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------------------T 295
D P K++ SATLT+DP K+ +L L P +
Sbjct: 1329 TSPTDIDEAPRSSCQKLLFSATLTRDPAKIVELQLRDPKYFIVKGISASQEVGDAMDVNV 1388
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
T ++ P L + ++CES KPL L L +VFT S EST RL LL +F
Sbjct: 1389 THVESFETPGTLREWMIVCESINKPLLLFYLAHKQQISDMLVFTKSAESTTRLLRLLGYF 1448
>gi|440909766|gb|ELR59643.1| ATP-dependent RNA helicase DDX51, partial [Bos grunniens mutus]
Length = 542
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 197/390 (50%), Gaps = 57/390 (14%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--WQ 60
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FP A+ W
Sbjct: 50 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPGAPALGRWT 109
Query: 61 ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
G DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++L
Sbjct: 110 GDGANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKEL 169
Query: 114 ALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 173
A QV VF A L V L GQ S+A E L+++ +
Sbjct: 170 AQQVSKVFNVYTDATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCLA 216
Query: 174 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 233
DI+VATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R
Sbjct: 217 DIMVATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR- 275
Query: 234 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
+ F + L C P L K++ SATLTQ+P KL QL L+ P
Sbjct: 276 DPCAVFQRTQPRVLTAASMC--------CPQMPLQKLLFSATLTQNPEKLQQLGLYQPRL 327
Query: 294 LTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
+TG +Y P L+ + + C + KPL ++ L+ + + +
Sbjct: 328 FSTGSAHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVL 387
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
FT+S E++HR L+ FG + + E+S
Sbjct: 388 CFTNSRENSHR---LVQAFGG--VTVAEFS 412
>gi|417411466|gb|JAA52168.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 535
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 200/391 (51%), Gaps = 57/391 (14%)
Query: 7 KSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ + + P L+ L+ GISS FPVQ AV
Sbjct: 41 KVHPFLPKWLAEPSRVRKNVTEDRVPVEDVIEVHPDLQKKLRAHGISSYFPVQAAVIPAV 100
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ RDLC+++PTGSGKTL++ LP+VQ L RAV +RALVVLPT++
Sbjct: 101 LESAANGFLVGRGGYQPRDLCVSAPTGSGKTLAFVLPVVQALLWRAVCHVRALVVLPTKE 160
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 161 LAQQVSRVFNVYTDATPLRVALVTGQKSLAKEQETLVQK-------------TADGFRCL 207
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL--QLTRSDNE 230
DI+VATPGRL+DHI+ T GF+L L +LV+DE DR++ +Q+WLP V+ R +
Sbjct: 208 ADIVVATPGRLVDHIDQTPGFSLRQLRFLVIDEADRMMDSMHQSWLPRVVAAAFPREGAQ 267
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
+ + P A + T P L K++ SATLTQ+P KL QL L+
Sbjct: 268 DPCALLQRRQPQAVTAASTC-----------SPQMPLQKLLFSATLTQNPEKLQQLGLYQ 316
Query: 291 PLFLTTGETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
P +T R Y P L + + C + KPL ++ L+ L +
Sbjct: 317 PRLFSTQPARGGPGDADADVGSGAKYTFPSGLSHHYVPCSLQAKPLVILHLILHLSFSRV 376
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S E+ HRL L+ FG + + E+S
Sbjct: 377 LCFTNSRENAHRLFLLVQAFGG--VAVAEFS 405
>gi|213511024|ref|NP_001133236.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
gi|209147204|gb|ACI32879.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
Length = 678
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 181/350 (51%), Gaps = 42/350 (12%)
Query: 27 CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINS 76
P+ +P + +L+ L++ GI LFPVQ V E++ GL RD+C+++
Sbjct: 213 VPISDVPGICTKLQRKLESNGIHHLFPVQAEVIPAILESVSHGLLIGRGGYKPRDVCVSA 272
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
PTGSGKTL++ +P++Q L R V +R L VLPT++LA QV VF++ A L V +
Sbjct: 273 PTGSGKTLAFVIPVIQALIGRVVCKVRVLAVLPTKELAQQVCKVFSSYAEGNSLKVVMLA 332
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
GQ S A E + L + GI + S DI+VATPGRL+DHIN GF+LE
Sbjct: 333 GQKSFAAEQALLSEN---RGGISH----------SLADIVVATPGRLVDHINKNDGFSLE 379
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
HL +L++DE DR++ +Q+WL V + R S+A + K +
Sbjct: 380 HLRFLIIDEADRMIDSMHQSWLSQVTKAVY--RPRRVSEAVSI-------FKRTEPAPIT 430
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETRYKLPER 306
P L K++ SATLTQ+P KL QL LH P ++ + R+ P+
Sbjct: 431 AASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSVHSQSTTNPESQERFNFPQG 490
Query: 307 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
L Y + C KPL ++ + L + FT+S E+THRL L+ FG
Sbjct: 491 LTEYYVPCTLSKKPLLILHFILRLKFSPILCFTNSREATHRLFLLVQLFG 540
>gi|328867619|gb|EGG16001.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 506
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 180/336 (53%), Gaps = 38/336 (11%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L I L PVQ V T G D+ + +PTGSGKTLSY LPIVQ L R +
Sbjct: 16 LNEQNIVDLMPVQSEIVPFIARTEG-----HDILVAAPTGSGKTLSYVLPIVQKLHKRII 70
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R LR LV+LPT DL +Q + F +I L V ++G S+ E S L+
Sbjct: 71 RRLRVLVILPTHDLVIQTEKTFQSIIKGTNLVVE-SLGLKSLHLEQSLLVSSH------- 122
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
Y+ ++ +S VDI+V TPGRL++H+N T GF L+HL YLV+DE DRLLRE+YQ WL
Sbjct: 123 YNQQNDSVYYESLVDIVVTTPGRLVEHLNETPGFNLQHLTYLVIDEADRLLRESYQFWLE 182
Query: 220 TVLQLTRSDNENRFSDAST-----FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
V+ T+S +R + S L S + SL G RL+K++LSA
Sbjct: 183 RVIDSTKSGTNDRSINLSNRGDMQILDSKYKSL------GSHLEHLSSKESRLIKLLLSA 236
Query: 275 TLTQDPNKLAQLDLHHPLFLTT-----GETRYKLPERLESYKLICESKLKPLYLVALLQS 329
T+T +P K++ L+L+ PL+ ++ T+Y +P+ L+ Y + C + KPL L+ ++ S
Sbjct: 237 TMTYNPEKISLLELNAPLYYSSTKKKESSTKYSMPDSLQEYYVACPASQKPLSLIHIVYS 296
Query: 330 L------GEEKCIVFTSSVESTHRLCTLLNHFGELR 359
+ + I FT++ E RL TL+ E+
Sbjct: 297 ILLKKKSDNARIICFTNNKEIAQRLHTLIGLVNEIN 332
>gi|255071295|ref|XP_002507729.1| predicted protein [Micromonas sp. RCC299]
gi|226523004|gb|ACO68987.1| predicted protein [Micromonas sp. RCC299]
Length = 523
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 189/365 (51%), Gaps = 46/365 (12%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
+ +D LP L+P+L VAL+ I F +Q W+ T G F+RDLC+++PTGSGKTL
Sbjct: 15 DHSSIDLLPGLEPKLCVALKTSKICRPFKIQADTWRHTGGGLSFDRDLCVSAPTGSGKTL 74
Query: 85 SYALPIVQTLSNRA-VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG------ 137
+YA+PIVQ L + + LR+LV++PT DLA QV +VF + AVGL V +A G
Sbjct: 75 AYAIPIVQALCRQTKLSHLRSLVIVPTGDLAAQVGNVFKPLCQAVGLKVSIAQGSGIKSL 134
Query: 138 -QSSIADEISELIKRPKLEAGICYD--PEDVLQELQSA-------VDILVATPGRLMDHI 187
+ E + P ++ + + +L S VDILV PGRL+ I
Sbjct: 135 YHNDAFGEQNAFRHHPAVKQKFITSLTVQTTVTDLTSNTEADIRDVDILVTPPGRLVTLI 194
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 247
L+ + +LV+DE DR+LR+ YQ WLP V NR TF ++ G
Sbjct: 195 RRFARLFLDRVEFLVIDEADRVLRQTYQGWLPLV---------NRTVVTGTF-HTSLGDR 244
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------GETRY 301
RR RL K++ SATLTQDP +LA L L P ++T E RY
Sbjct: 245 GASRR-------------RLKKLLFSATLTQDPGRLAGLHLKAPHRISTVVSQAMRENRY 291
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
LP L+ Y +I K L L ALL+ +G IVFT+SV++T RL LL+ L K
Sbjct: 292 FLPPGLKEYVIISRGDEKLLVLCALLKRIGPTPAIVFTASVDATRRLFRLLHLMIGLPSK 351
Query: 362 IKEYS 366
EYS
Sbjct: 352 PVEYS 356
>gi|395840150|ref|XP_003792928.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Otolemur garnettii]
Length = 665
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 195/387 (50%), Gaps = 51/387 (13%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P + ++ E P++ +P + P L+ L+ GIS FPVQ AV
Sbjct: 173 KVQPFLPAWLAEPSCIQKNIAEGLVPIEDIPEVHPDLQKQLRAQGISFYFPVQAAVIPTL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L R V +RALVVLPT++
Sbjct: 233 LESAANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLQRVVCHVRALVVLPTKE 292
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ ++A E L+++ +
Sbjct: 293 LAQQVSKVFNIYTDTTPLRVALITGQKTLAKEQESLVQK-------------TTDGYRCL 339
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+
Sbjct: 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA------- 392
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P + ++ V P L K++ SATLTQ+P KL QL LHHP
Sbjct: 393 FQGEGPPDPCVLLQRRQLQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHHPR 450
Query: 293 FLTTG-------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 339
+T +Y P L + + C KPL ++ L+ + + FT
Sbjct: 451 LFSTSLACKGPQDADGDVGGKYAFPVGLTHHYVPCSLSTKPLLVLHLILEKSFSRVLCFT 510
Query: 340 SSVESTHRLCTLLNHFGELRIKIKEYS 366
+S E++HRL L+ FG + + E+S
Sbjct: 511 NSRENSHRLFLLVQAFGG--VSVAEFS 535
>gi|348688141|gb|EGZ27955.1| hypothetical protein PHYSODRAFT_258291 [Phytophthora sojae]
Length = 550
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 184/373 (49%), Gaps = 47/373 (12%)
Query: 35 LDPRLKVALQNMGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L P + +L + I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ
Sbjct: 27 LAPEVSRSLAALSIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQR 86
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
L R V +RAL+VLP+RDLA+QV + L GLA+GQS+ A E S L+
Sbjct: 87 LLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVKGTPLKCGLAIGQSNFAVEQSALVGDVS 146
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
E +S VDILVATPGRL+DH+ T GFTL+HL ++VDE DRLL ++
Sbjct: 147 GE-----KVSSTTDGGRSLVDILVATPGRLVDHLEQTPGFTLQHLQIMIVDEADRLLNQS 201
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC-GVERGFKDKPYPRLVKMVL 272
YQ W+P V + E D A G T RR + R P L +++L
Sbjct: 202 YQDWIPKVYASVFNGQE---VDEEGL---ALGVGVTCRRQDSINRRRIRTP---LTRVLL 252
Query: 273 SATLTQDPNKLAQLDLHHPLFLTTGE-------------------------------TRY 301
SATLT++P KLA + + + G Y
Sbjct: 253 SATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKQGTAGDSDDDDEDGEEASGSAKMY 312
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
P LE Y + C++ KPL L+ LL IVFT+SV STHRL LL + +
Sbjct: 313 STPTNLEEYWIECDTGSKPLVLLELLSEFAGALSIVFTASVNSTHRLARLLQLYSTHPER 372
Query: 362 IKEYSGLQRQSVR 374
I+E+S Q R
Sbjct: 373 IREFSSSLSQKQR 385
>gi|440801982|gb|ELR22922.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 187/368 (50%), Gaps = 69/368 (18%)
Query: 31 HLPCLDPRLKVAL-QNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP 89
H+ L P + L Q GI+ FP+Q V +P
Sbjct: 249 HVKGLHPTIVQNLEQQFGIAQFFPIQAQV-----------------------------IP 279
Query: 90 IV--QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
++ TL NR V LRALV+LP RDLALQVK VF + L V + VGQSS + +
Sbjct: 280 VILRSTLLNRVVVRLRALVILPNRDLALQVKSVFDLLCEGTDLKVEIVVGQSSFRKDQEK 339
Query: 148 LIK--------------RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
L++ + EAG P L+EL VDIL+ TPGRLMD +N TRGF
Sbjct: 340 LVQGEEGPDAADLRGASTSEAEAGDRSAP--ALKEL---VDILICTPGRLMDLLNQTRGF 394
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF------SDASTFL---PSAF 244
TL+HL +LV+DE DRLL +++Q WL VLQ T S + R +D L
Sbjct: 395 TLQHLRFLVIDEADRLLDQSFQDWLNKVLQATHSSTQGRVYGCVDETDQEAHLRIDARTM 454
Query: 245 GSLKTIR-----RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
L ++R + ++P P L K++ SATLT +P K+A L L++P F + T
Sbjct: 455 RQLTSVRSVHLSSTALHSIIPEEPEP-LHKLLFSATLTNNPKKIAALRLNNPHFFSATST 513
Query: 300 R-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
YK+PE+L+ Y +IC KPL L+ LL+ ++ + FTSSVESTHRL LL G+
Sbjct: 514 GLYKMPEKLQEYMVICSLAYKPLVLLYLLEMFDFKRTLCFTSSVESTHRLYLLLTLMGQ- 572
Query: 359 RIKIKEYS 366
+ EYS
Sbjct: 573 -TGVAEYS 579
>gi|325188363|emb|CCA22900.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 496
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 174/322 (54%), Gaps = 50/322 (15%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
D CI++PTGSGKT +Y +PI+ L R + LRAL+V+PTRDLA QV V + + L
Sbjct: 61 DFCISAPTGSGKTFTYLIPILLQLQQRIICRLRALIVVPTRDLATQVHQVASVLCGGTKL 120
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
+ GQ++ E + +L + S +DIL+ATPGRL+DH+ T
Sbjct: 121 KCAVVTGQANFGQE------------------QRLLSDTHSGIDILIATPGRLVDHLEQT 162
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
GFTL+HL +L+VDE DRLL ++YQ W+ V Q + +S S +L I
Sbjct: 163 NGFTLQHLQFLIVDEADRLLTQSYQDWIAKVYQ-------SVYSTVSAVPLRPEDNLVAI 215
Query: 251 RRCGVERGFKDKPYPRL--VKMVLSATLTQDPNKLAQLDLHHPLFL----TTGE------ 298
R G ++ R+ ++++LSATLT++P+KLA + +H+ L + GE
Sbjct: 216 RTIRTANGIQNHKQIRVPFIRVLLSATLTENPSKLALIGMHYARVLKIKGSEGEDSMPKA 275
Query: 299 ---------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 349
+ Y+ PE+LE + + C+S KPL L+ LL + ++ ++FTSSV +THRL
Sbjct: 276 QTECELDADSVYETPEKLEEWMIECDSDSKPLRLIQLLLTFKDQMTLIFTSSVNATHRLT 335
Query: 350 TLLN----HFGELRIKIKEYSG 367
LL + + ++EYS
Sbjct: 336 RLLQLVFKEHSDDDVGVQEYSS 357
>gi|390594629|gb|EIN04039.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 636
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 195/399 (48%), Gaps = 71/399 (17%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAV----------WQETIGPGLFERDLCINSPTGSGKT 83
L +++ L+ +GI LF VQ A+ + P RD C+++PTGSGKT
Sbjct: 122 SLSEKMRRRLKELGIGELFAVQTALLPFLLPSSPAQRALYMPYDPPRDACVSAPTGSGKT 181
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIAD 143
L+Y +PIV+ L++R V LRALVVLPTRDL QV++ F A+ GL + A GQ S A
Sbjct: 182 LAYVIPIVEVLASRIVTRLRALVVLPTRDLVAQVRETFEAVGKGRGLKIATATGQHSFAH 241
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
E ++L+ D L S VD+L+ TPGRL+DH+ T FTL+HL +LV+
Sbjct: 242 EQTQLMA----------DRSKPLLGGSSKVDVLICTPGRLIDHLEGTPNFTLQHLRFLVI 291
Query: 204 DETDRLLREAYQAWLPTVLQLTR--------------SDNENRFSDASTFLPSAFGSLKT 249
DE DRLL + +Q WL VL TR S + +DA L AF SL
Sbjct: 292 DEADRLLAQLFQDWLAKVLAATRPPSSLSSAFALSSPSSSVVPHADA---LAPAFASLLG 348
Query: 250 I---RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE------- 298
+ G+ F + K++ SATLT+DP KLA L L P F+ GE
Sbjct: 349 LSPSSPSGLLTEFDEPKASSCQKLLFSATLTRDPGKLAALALREPRYFVVAGERKRAQGA 408
Query: 299 ------------------TRYKLPERLESYKLICESKLKPLYLVALLQSLG----EEKCI 336
++ +PE LE + L+ + KPL L+ L+ + G +
Sbjct: 409 EEREEEAGKMDGVVDFVMEKFSVPETLEEHYLVTSAAQKPLALMYLVHARGVGADSGGVL 468
Query: 337 VFTSSVESTHRLCTLLNHFGELRIK-IKEYSGLQRQSVR 374
VF S E+ RL + F E R+ + +G +R SV+
Sbjct: 469 VFAKSAEAVARLVKFVEFFEEARVDALPADTGRRRVSVK 507
>gi|195127527|ref|XP_002008220.1| GI11933 [Drosophila mojavensis]
gi|193919829|gb|EDW18696.1| GI11933 [Drosophila mojavensis]
Length = 670
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 195/368 (52%), Gaps = 57/368 (15%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
+ LP L+ ++ AL+ M I LFPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 144 IKQLPYLEKYIRSALKQMKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKT 203
Query: 84 LSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
L++A+PIVQ L+ R V+C +RALVVLP +LALQV VF+A+ L V L Q +
Sbjct: 204 LAFAIPIVQLLAKR-VQCKVRALVVLPVAELALQVYKVFSALCSLTELEVCLLSKQHRLE 262
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
DE +L+++ K G+ Y S VDI+V TPGRL+DH++AT+GF L+ L +LV
Sbjct: 263 DEQDKLVEQYK---GVYY----------SKVDIVVTTPGRLVDHLHATKGFCLKSLKFLV 309
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DR++ +Q WL + RS + + P + L + +
Sbjct: 310 IDEADRIMDAVFQNWLYHLDAHVRSTADQLLTGVQA--PLCYQELLN--------SWGKQ 359
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET----------------------R 300
P+ K++ SATL+QDP KL L L P TT T +
Sbjct: 360 PH----KLLFSATLSQDPEKLQNLRLFQPKLFTTTLTMPVLQPALDNGELPDQTSTFIGK 415
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL-CTLLNHFGELR 359
Y P L + E +LKPL L A++ ++ + FT+S ++ +RL C L++ F +
Sbjct: 416 YTTPAELTEQYCVTEMRLKPLTLYAMVLLNNWKRFLCFTNSADTANRLACVLVHLFKDST 475
Query: 360 IKIKEYSG 367
I++KE S
Sbjct: 476 IRVKELSA 483
>gi|392573109|gb|EIW66250.1| hypothetical protein TREMEDRAFT_35235, partial [Tremella
mesenterica DSM 1558]
Length = 694
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 187/348 (53%), Gaps = 41/348 (11%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE------RDLCINSPTGSGKTLSYA 87
+ + L +G+ F VQ A+ + + L D I++PTGSGKTL+YA
Sbjct: 218 AISEHMSARLSELGVIDFFAVQAALLPKLLPLSLTPLKYANLHDYLISAPTGSGKTLAYA 277
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
+PI++ LS R + LRAL+VLPT+DL +QV++ +A L +G GQ S A E
Sbjct: 278 IPIIEILSARTITRLRALIVLPTKDLVVQVRETLELLAKGTDLKIGTIGGQHSFAHEQKV 337
Query: 148 LIKRPKLEAGICYDPEDV-LQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
L+ ED+ ++EL S VDIL+ATPGRL+DH++ T FTL+HL +LV+D
Sbjct: 338 LV-------------EDLEIKELGGSSKVDILIATPGRLIDHLSQTPNFTLQHLRFLVID 384
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV---ERGFKD 261
E DRLL ++YQ WL VL+ TR ++N + +P + + CG+ D
Sbjct: 385 EADRLLNQSYQDWLMMVLRHTRPTDDN-MALEREIMPDDHVAPLWMSACGLGDKSHSLLD 443
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------------TTGETRYKLPERLES 309
P + K++ SATLT+DP K+A L L+ P + + GE ++ +P L
Sbjct: 444 PPEQQCQKLLFSATLTRDPAKVASLSLNSPRYYIIQSSLAQPSAHSIGE-QFAIPASLTE 502
Query: 310 YKLICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHF 355
+ LI +LKPL L+ L+ S ++FT SVES RL LL +F
Sbjct: 503 FMLILPPQLKPLNLIHLIHSPEYAVSSALIFTKSVESCVRLVKLLEYF 550
>gi|281209875|gb|EFA84043.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 559
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 187/356 (52%), Gaps = 47/356 (13%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L + GI L VQ V T G D+C+ +PTGSGKTL+Y LPIVQ L NR V
Sbjct: 51 LNDQGIVELLAVQNEIVPFIARTEG-----HDICVCAPTGSGKTLAYVLPIVQKLYNRVV 105
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R LR + ++PT DL Q + F +I L V +G S A E S ++
Sbjct: 106 RRLRVICIVPTHDLVTQTEATFKSITKGTDLVVE-TLGLRSFALEQSLIVSSH------- 157
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
++ E+ QS VDI+V TPGRL++H+N T GF L+HL YLV+DE DRLLRE++Q WL
Sbjct: 158 FNDENNSVTYQSLVDIIVCTPGRLVEHLNETPGFDLQHLTYLVIDEADRLLRESFQYWLE 217
Query: 220 TVLQLTRSDNENRFS---------DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 270
V+ + E S S + ++ G R FK+ R++K+
Sbjct: 218 KVMDSSSVSKERLISIGSRGDISISDSKYNNTSSGGSSNFRSHIDHLSFKE---SRVIKL 274
Query: 271 VLSATLTQDPNKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESKLKPLYLVALL 327
+LSAT++ +P K++ L L+ PL+ + E +Y +P+ L+ + C S KPL L++++
Sbjct: 275 LLSATMSYNPEKISLLKLNAPLYFQSNKISELKYTIPDTLKESYIACHSDQKPLALISVI 334
Query: 328 QSLGEEK-------------CIVFTSSVESTHRLCTLLNHFGE---LRIKIKEYSG 367
++ + K I FT+S++ T RL TLL GE +++K +YS
Sbjct: 335 GNIFKSKQQQQTDQNDNIARIICFTNSIDITQRLNTLLGFIGEVDGVKLKPAQYSS 390
>gi|91092858|ref|XP_969365.1| PREDICTED: similar to ATP-dependent RNA helicase DDX51 [Tribolium
castaneum]
gi|270003080|gb|EEZ99527.1| hypothetical protein TcasGA2_TC000109 [Tribolium castaneum]
Length = 601
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 192/387 (49%), Gaps = 58/387 (14%)
Query: 5 KKKSMPVLP-WMRSPVDVS--LFE-DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K K+ VLP W+ +P +S L E C + L LD L+ L+ G+ LFPVQ V
Sbjct: 103 KPKADRVLPQWLANPTVISSDLQELTCKVSKLKELDKGLREQLKANGVKYLFPVQAEVIP 162
Query: 59 W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
W +F RD+C+++PTGSGKTL++ LP+VQTL VR +RALV+LPT+DLA
Sbjct: 163 WVLQSRQNADIMFPRDVCVSAPTGSGKTLAFVLPVVQTLKQFTVRKIRALVILPTQDLAE 222
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV F + VGL G+ E +L+ C+ S +DI
Sbjct: 223 QVFKSFKLYTQGTRIEVGLVSGKQMFQAEQKQLV-----YFNECFG-------FVSKIDI 270
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
LV T GRL++H+ +T GF L+ L +L++DE DR+L WL L+ +NR
Sbjct: 271 LVCTAGRLVNHLKSTNGFNLQALEFLIIDEADRVLESVQDDWL-YHLEKHIYTIQNR--- 326
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
K + C ++R + P+ K++ SATLTQDP K+ +L L P T
Sbjct: 327 ------------KVLNVCTLQR----QRAPQ--KLLFSATLTQDPEKIEKLSLFQPKLFT 368
Query: 296 TG---------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
+ +Y P+ L ++C +KPL L A L+ K +VFT
Sbjct: 369 SSVVENSNESEEKPMILTGKYTTPKELTEKYIVCSKDVKPLVLYAFLKRENLTKTLVFTH 428
Query: 341 SVESTHRLCTLLNHFGELRIKIKEYSG 367
SVES HRL LL + R+KI+E S
Sbjct: 429 SVESAHRLKILLKSLFKKRLKIEEISS 455
>gi|194750630|ref|XP_001957633.1| GF10505 [Drosophila ananassae]
gi|190624915|gb|EDV40439.1| GF10505 [Drosophila ananassae]
Length = 683
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 199/400 (49%), Gaps = 64/400 (16%)
Query: 5 KKKSMPVLPWMRSPV---------DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
+K M + W+ P D + + +D LP L+ +AL+ M I LFPVQ
Sbjct: 106 RKVEMQLPNWLAHPTIIAGGSLQADEEISDAEAIDQLPYLEKSTCLALKQMKIKRLFPVQ 165
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W ++ P RD+C+++PTGSGKTL++A+PIVQ L+NR +RALVVLP
Sbjct: 166 REVIPWILEAQSKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLANRVECKIRALVVLPV 225
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V +A+ L V L Q + DE +L+ +L G Y
Sbjct: 226 AELALQVYQVISALCNKTELEVCLLSKQHKLEDEQEKLV---ELYKGKYY---------- 272
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S VDI+V TPGRL+DH++AT+GF L++L +L++DE DR++ +Q WL + + +
Sbjct: 273 SKVDIVVTTPGRLVDHLHATKGFCLKNLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTD 332
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L++ F ++P+ K++ SATL+QDP KL L L
Sbjct: 333 QLL--AGTQAPLCYAELQS--------SFGNQPH----KLLFSATLSQDPEKLQNLRLFQ 378
Query: 291 PLFLT---------TGET-------------RYKLPERLESYKLICESKLKPLYLVALLQ 328
P T TGE +Y P L I E +LKPL L AL++
Sbjct: 379 PRLFTTVMPVLREPTGEEGDAEADTDGQFLGKYTTPAELTEQICITEMRLKPLTLYALVE 438
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSG 367
++ + FT+S + RL ++ F K+ E SG
Sbjct: 439 KYKWKRFLCFTNSTDQASRLAFVMATLFENSETKVAELSG 478
>gi|348537210|ref|XP_003456088.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oreochromis
niloticus]
Length = 621
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 172/349 (49%), Gaps = 48/349 (13%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSG 81
+P L +L L + GI FPVQ V IG G ++ RD+C+++PTGSG
Sbjct: 162 VPGLCAQLLKNLHSNGIQHFFPVQAEVIPAILESAQQGLLIGRGGYKPRDICVSAPTGSG 221
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KTLS+ +PI+Q L +R V +RAL VLPT++LA QV VFA+ A L V + GQ S
Sbjct: 222 KTLSFVIPIIQVLMDRVVCEVRALAVLPTKELAQQVHRVFASYAEGTSLKVVMLAGQKSF 281
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
A E + L E +S DI+VATPGRL+DH+ G LEHL +L
Sbjct: 282 AAEQASL-------------SEHRWNMRRSLADIVVATPGRLIDHMTKNSGLCLEHLRFL 328
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DR++ +Q+WL V+ +R S F +T C +
Sbjct: 329 VIDEADRMIDSMHQSWLSQVMGAV---YRSRAEPGSVF-------RRTEAAC-ITSASLS 377
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--------------TTGETRYKLPERL 307
P L K++ SATLTQ+P KL QL LH P T G R+ P+ L
Sbjct: 378 PPQTPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSAHGQADSTAASPTHGHDRFNFPQGL 437
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + C KPL L+ + + + FT+S E+ HRL LL FG
Sbjct: 438 TEYYVPCTMSSKPLLLLHFILRMKLHPILCFTNSRETAHRLHLLLQLFG 486
>gi|403159589|ref|XP_003320191.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168160|gb|EFP75772.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 893
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 189/385 (49%), Gaps = 94/385 (24%)
Query: 43 LQNMGISSLFPVQVAV----------WQETIGPGLFE-----RDLCINSPTGSGKTLSYA 87
L+ + +L VQ+AV + T L+ RDLC+++PTGSGKTLSY
Sbjct: 346 LKQLEFENLLAVQIAVFSLLMPPLSAYSNTPASSLYPTRRPPRDLCVSAPTGSGKTLSYI 405
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
+PIV+TLS+R V LRAL+VLPTRDL LQVK+ F + GL + GQ S E ++
Sbjct: 406 VPIVETLSSRVVCRLRALIVLPTRDLVLQVKNTFDCFSKGTGLKAAIITGQHSFTKEQAQ 465
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
L G D L+ +VD+L+ATPGRL+DH+N T GF+L+HLC+LV+DE D
Sbjct: 466 L--------GCSRD------GLEGSVDVLIATPGRLVDHLNHTSGFSLQHLCFLVLDEAD 511
Query: 208 RLLREAYQAWLPTVLQLTRSDNENR--------------------FSDASTFLPSAF--G 245
+LL ++ QAWL VL + + + F + F PS G
Sbjct: 512 QLLNKS-QAWLHQVLSTSAASEVPKPMEHTEPIKSSFNHPKSLLGFRSSEPFEPSHLLDG 570
Query: 246 SLKTIRRCGVERGFKD------------KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
L T+ + G + +P+ R+ ++ SATL +DP KLA L L HP+F
Sbjct: 571 PLSTVEMHNQDHGLTENLPIETYNPCRLRPF-RI--LLFSATLRRDPVKLAHLGLRHPVF 627
Query: 294 LTTG-------------ETR--------------YKLPERLESYKLICESKLKPLYLVAL 326
+ +TR Y LP+ L+ Y ++ + LKPL L
Sbjct: 628 VKISSSSTTLVVDGDLDQTRRESGTIDFVDQLNGYCLPKTLKQYLIVTRTDLKPLVFFKL 687
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTL 351
LQS EK + F S++ RL L
Sbjct: 688 LQSQRIEKALCFCKSIDGARRLTGL 712
>gi|328768512|gb|EGF78558.1| hypothetical protein BATDEDRAFT_35707 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 176/351 (50%), Gaps = 72/351 (20%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L MGI FPVQ A+ W +++ PG DLC+ + TGSGKTL+YA+PIV+T
Sbjct: 159 LTAMGIEHWFPVQEAILPQLLKTRWWTQSVSPG----DLCVAASTGSGKTLAYAVPIVET 214
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK--- 150
L R + +RALV++PTRDLALQV+ F ++ L V GQ+S + E + L+
Sbjct: 215 LLTRVIPRIRALVIVPTRDLALQVRRTFESLVIGTKLRVAAVTGQASFSAEKALLVSAEI 274
Query: 151 --RPKLEAGICYDP---EDVLQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
L++ + P ED + E S +DIL+ATPGRLMDH+N T GF+L HL +LV+
Sbjct: 275 PCSSSLDSLLLQHPLANEDAITESGGSSRIDILIATPGRLMDHLNGTPGFSLSHLRFLVI 334
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE DRLL +++ WL +VL+ ++ +++ D P
Sbjct: 335 DEADRLLNQSFHGWLGSVLK----------------------AVDPVQKEAAASNHLDIP 372
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------------------------- 297
L K++ SATLT++P+K+A L L +P ++T
Sbjct: 373 STALQKLLFSATLTRNPSKIASLRLRNPRYITVSGSPDGLLDQDVNNVDMNDQPANITSS 432
Query: 298 -ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
E R+ P L ++ KPL L+ +L +VF SVES HR
Sbjct: 433 VEQRFITPPSLVERMVVLSESDKPLALLYFFDTLKHSGVLVFVKSVESAHR 483
>gi|301604620|ref|XP_002931939.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Xenopus (Silurana)
tropicalis]
Length = 660
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 196/395 (49%), Gaps = 62/395 (15%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K +PVLP W+ P V ++ ++ P+ + CL P++ L+ + LFPVQ A
Sbjct: 164 EKVLPVLPQWLAQPSLVQKNIKQNLVPIHDIHCLHPKVLKKLEANKVKYLFPVQAEVIPA 223
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R V +RALVVLPT+
Sbjct: 224 ILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQRVVCEVRALVVLPTK 283
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV VF +GL V + GQ S E LI + G C S
Sbjct: 284 ELAQQVCKVFNTYVDGMGLKVVMVTGQKSFLKEQESLIHKTAF--GFC-----------S 330
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR---SD 228
DILV TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V + +D
Sbjct: 331 LADILVCTPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVVAD 390
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ N F G L C P L K++ SATLTQ+P KL QL L
Sbjct: 391 SPNML-----FTRKEPGILTAASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGL 437
Query: 289 HHPLFLTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLG 331
+ P T+ + + LPE L Y + C KPL L+ L SL
Sbjct: 438 YQPRLFTSKQKGTSDDSSETQMESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLR 497
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ + FT+S +++HRL L+ FG I + E+S
Sbjct: 498 FSRVLCFTNSRDASHRLYLLVRSFG--GISVAEFS 530
>gi|301117032|ref|XP_002906244.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107593|gb|EEY65645.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 564
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 186/373 (49%), Gaps = 47/373 (12%)
Query: 35 LDPRLKVALQNMGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L P + L + I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ
Sbjct: 29 LAPEVCATLTKLNIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQR 88
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
L R V +RAL+VLP+RDLA+QV + L GLA+GQS+ A E + L+
Sbjct: 89 LLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQGTPLKCGLAIGQSNFAAEQNALVGATS 148
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
I +S VDILVATPGRL+DH+ T GFTL+HL ++VDE DRLL ++
Sbjct: 149 GNKVIATTDGG-----RSLVDILVATPGRLVDHLEQTPGFTLQHLQIMIVDEADRLLNQS 203
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC-GVERGFKDKPYPRLVKMVL 272
YQ W+ V + E D T G T RR + R P L +++L
Sbjct: 204 YQDWISKVYASVFNGQEVD-EDGLT-----LGVGVTCRRQDSINRRRIRTP---LTRVLL 254
Query: 273 SATLTQDPNKLAQLDLHH-----------PL-------------------FLTTGETR-Y 301
SATLT++P KLA + + + PL TG + Y
Sbjct: 255 SATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGNAGDSDDEDEDGDEATGSKKMY 314
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
P L+ Y + C++ KPL L+ LL IVFT+SV STHRL LL + +
Sbjct: 315 STPTNLDEYWIECDTGSKPLVLLELLSEFAGSLSIVFTASVNSTHRLARLLQLYSTHPER 374
Query: 362 IKEYSGLQRQSVR 374
I+E+S Q R
Sbjct: 375 IREFSSSLSQKQR 387
>gi|410914978|ref|XP_003970964.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Takifugu
rubripes]
Length = 596
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 185/380 (48%), Gaps = 53/380 (13%)
Query: 6 KKSMPVLP-WMRSPVDVSLFED-----CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+K VLP W+ P DV + +D P+ + L P+ L + GI FPVQ V
Sbjct: 106 QKVHRVLPQWLAQP-DV-IHKDIKGHLVPVCKIAGLAPKFINKLHHNGIDHFFPVQAEVI 163
Query: 60 QET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
IGPG ++ RD+C+++PTGSGKTL++ +P++Q L R + +RAL VLP
Sbjct: 164 PAVLESAQQGLLIGPGGYKPRDICVSAPTGSGKTLAFVIPVIQVLMQRVICEVRALAVLP 223
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
T++LA QV VF+ A L V + GQ S A E + L E
Sbjct: 224 TKELAQQVFKVFSTYAEGTPLRVLMLAGQKSFAAEQASL-------------SEYRGSRR 270
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
+S DI+VATPGRL+DHI+ G LE L +L++DE DR++ +QAWL V++ T S
Sbjct: 271 RSLADIIVATPGRLVDHIHKKSGLNLEQLRFLIIDEADRMIDSMHQAWLSQVVKATYSSG 330
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
P A+ + P L K++ SATLTQ+P KL QLDLH
Sbjct: 331 SE---------PEAWSIFSRSEPACITAASLSPPRMPLQKLLFSATLTQNPEKLQQLDLH 381
Query: 290 HPLFLTTGETR-------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
P ++ + + P+ L + + C KPL ++ + L +
Sbjct: 382 QPRLFSSNHCQADGTVAAAQKADCFDFPQGLTEFYVPCTLSRKPLLILHFVLRLKLSPIL 441
Query: 337 VFTSSVESTHRLCTLLNHFG 356
FT+S E+ HRL L+ FG
Sbjct: 442 CFTNSREAAHRLYLLVQLFG 461
>gi|326429455|gb|EGD75025.1| hypothetical protein PTSG_07250 [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 201/384 (52%), Gaps = 53/384 (13%)
Query: 5 KKKSMPVLPWMRSPVDVSLF----EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
++ + ++ W+ PV V E P++ L L PRL L+ G S LFPVQ +
Sbjct: 211 QRNTGGLVHWLDHPVRVDALIKPDELLPMETL-GLHPRLLAQLKVAGFSRLFPVQAVIVP 269
Query: 61 ETI---GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ + D+C+++PTGSGKTL+Y +PI+Q L R V LRA+VVLPTR L QV
Sbjct: 270 DMLRSRHSAYPAGDICVSAPTGSGKTLAYVIPILQRLCTRVVPQLRAVVVLPTRQLVQQV 329
Query: 118 KDVFAAIA------PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
VF A + V + V + GQ+++ E + + +P+L+ S
Sbjct: 330 HAVFEACSRNIHADSTVPIRVAMCAGQTALWKE--QQLLQPRLDGS-------------S 374
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
AVDI++ TPGRL+DHI+ T GFTL+H+ +LVVDE DRLL ++YQ+WL + +
Sbjct: 375 AVDIVITTPGRLVDHIDRTDGFTLQHVEFLVVDEADRLLMQSYQSWLSKLHNCLFAGGR- 433
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
D + P + + R F P + KM SATL++DP +A L L P
Sbjct: 434 --PDPTNLTPQMYA----LMRAACAHNF---PGVHVQKMFFSATLSRDPQIIANLRLCFP 484
Query: 292 ---LFLTTGET-----------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
L TG+ +P +L + ++C + KPL L+ LL SL ++ +V
Sbjct: 485 RMYLATQTGQAVVCVFGGKKGVNTVIPPQLHEHSIVCSASEKPLVLLYLLSSLQMDRTLV 544
Query: 338 FTSSVESTHRLCTLLNHFGELRIK 361
F SSVE+T RL TLL FG +R++
Sbjct: 545 FASSVETTTRLYTLLKLFGAVRVQ 568
>gi|195014606|ref|XP_001984044.1| GH15223 [Drosophila grimshawi]
gi|193897526|gb|EDV96392.1| GH15223 [Drosophila grimshawi]
Length = 675
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 191/380 (50%), Gaps = 59/380 (15%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTG 79
++ + L L+ AL+ M I LFPVQ AV W + P F RD+C+++PTG
Sbjct: 137 DETSIKQLAYLEKHTCSALKQMKIERLFPVQRAVIPWILEAQSKPAPFRPRDICVSAPTG 196
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
SGKTL++A+PIVQ L+NR +RALVVLP +LALQV VF+ + L V L Q
Sbjct: 197 SGKTLAFAIPIVQLLANRVECKVRALVVLPVAELALQVYKVFSVLCSKTELEVCLLSKQH 256
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
+ DE +L+++ K G+ Y S VDI+V TPGRL+DH++AT GF L+ L
Sbjct: 257 RLEDEQEKLLEQYK---GVYY----------SKVDIVVTTPGRLVDHLHATEGFCLKSLQ 303
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE--R 257
+LV+DE DR++ +Q WL + R+ + + L C E
Sbjct: 304 FLVIDEADRIMDAVFQNWLYHLDSHVRTTADQLLTGVQAPL------------CYQELLN 351
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------ 299
+ +P+ K++ SATL+QDP KL L L P TT T
Sbjct: 352 SYGKQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTVFTLPVLPSALDIAELPEQSS 407
Query: 300 ----RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH- 354
+Y P L + E +LKPL L ++Q+ G ++ + FT+S ++ RL +L H
Sbjct: 408 QFIGKYTTPTELTEQYCVTELRLKPLTLYTMVQTYGWKRFLCFTNSADTADRLAFVLKHL 467
Query: 355 FGELRIKIKEYSGLQRQSVR 374
F I ++E S + VR
Sbjct: 468 FQGSPITVEELSANMKVGVR 487
>gi|328863604|gb|EGG12703.1| hypothetical protein MELLADRAFT_101203 [Melampsora larici-populina
98AG31]
Length = 892
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 199/385 (51%), Gaps = 74/385 (19%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-------------- 70
+DC D L L + L+ +GI L PVQ++V+ IG ++
Sbjct: 354 KDCKDDQL-ALSQFIINRLKEIGIEYLLPVQISVFSALIGKLRNKKITPSSILYPINHPP 412
Query: 71 -DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+CIN+PTGSGKTLSY +PIV+TLS+R V LRAL+VLPTRDL LQVK F +I+ G
Sbjct: 413 SDICINAPTGSGKTLSYIVPIVETLSSRTVVRLRALIVLPTRDLVLQVKQTFESISKGTG 472
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L + + GQ S + E + L +G P + E + VD+++ATPGRL+DH+N
Sbjct: 473 LKLAIVTGQHSFSQEQA-------LLSGNA--PFNTSSECK--VDVVIATPGRLIDHLNQ 521
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL-----QLTRSDNENR----FSDASTFL 240
T GF+L HLC+L++DE D+LL + Q+WL +L +L+++ + ++ + D + +
Sbjct: 522 TPGFSLSHLCFLILDEADQLLSKD-QSWLYQILKYELKKLSKTHSNSKQIINYDDEDSEM 580
Query: 241 PSAFGSLKTIRR--------------CG-----------VERGFKDKPYPRLVKMVLSAT 275
L + R C +E K +P+ R+ ++ SAT
Sbjct: 581 MIQQEELNSARNEPLPLLKKFMDSVECNEISSDWRPLLKLEDPCKTRPF-RI--LLFSAT 637
Query: 276 LTQDPNKLAQLDLHHPLFLTTGE---------TRYKLPERLESYKLICESKLKPLYLVAL 326
L +DP KL L L +PLF+ + Y LP L+ + ++ +LKPL L L
Sbjct: 638 LKRDPTKLTHLGLRNPLFIKVQNPSVEVIDNFSGYSLPPNLQQHLIVTTPQLKPLTLFHL 697
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTL 351
++ + ++F SVE RL L
Sbjct: 698 IKVREVKNALIFCKSVEGATRLVNL 722
>gi|321459585|gb|EFX70637.1| hypothetical protein DAPPUDRAFT_112535 [Daphnia pulex]
Length = 721
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 184/380 (48%), Gaps = 61/380 (16%)
Query: 7 KSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--WQ 60
K VLP W+ P +S P+ L LD L AL I FPVQ V W
Sbjct: 204 KVFRVLPTWLAKPSVISCDLSKNKMPIKELNGLDKFLHDALNRNKIGFFFPVQQQVIPWL 263
Query: 61 ETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
LF D+C+++PTGSGKTL++ LP +Q L ++VR LR L VLP DLA+QV
Sbjct: 264 LESQQQLFRPCDMCVSAPTGSGKTLAFVLPTIQALWRQSVRRLRCLAVLPVHDLAVQVYR 323
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
V+ + L V L GQ+S DE L+++ K AG + + DI+V T
Sbjct: 324 VYLSFCAGTNLQVALISGQASFYDEQQLLVRKGK--AG----------QYLTKPDIVVCT 371
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL+DH+ T GF+L+ L YL++DE DR++ E + WL V + +EN + +
Sbjct: 372 PGRLVDHLQRTPGFSLKSLRYLIIDEADRIMEEEHNDWLFHVEKAIGLSSENLVAQKLS- 430
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLV-KMVLSATLTQDPNKLAQLDLHHPLFLT--- 295
+P+ + V K++ SATL+QDP KL +L L P T
Sbjct: 431 ----------------------RPWEKYVQKLLFSATLSQDPEKLTRLGLFQPKLFTSVV 468
Query: 296 ---TGET------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
+ E+ ++ P L + C LKPL + LL+ + FT+
Sbjct: 469 STESAESADNTIQSHHFVGKFTTPAELTEHFFKCPPMLKPLAVYCLLKKFKYHSALCFTN 528
Query: 341 SVESTHRLCTLLNHFGELRI 360
S +THRLC LL FG+L++
Sbjct: 529 SRSATHRLCELLKQFGDLKV 548
>gi|47214668|emb|CAG00904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 177/346 (51%), Gaps = 45/346 (13%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET---------IGPGLFE-RDLCINSP 77
P+ ++ L L L + GI FPVQ V IG G + RD+C+++P
Sbjct: 26 PVCNVAGLSSNLINKLHHNGIDHFFPVQAEVIPAILEAAQQGLLIGRGGYRPRDICVSAP 85
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
TGSGKTL++ +P+VQ L R V +RAL VLPT++LA QV VF+A A L V + G
Sbjct: 86 TGSGKTLAFVIPVVQVLMQRVVCHVRALAVLPTKELAQQVYKVFSAYAEGTSLRVLVLAG 145
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 197
Q S++ E + L + AG+ +S DI+VATPGRL+DHIN G L+
Sbjct: 146 QRSLSAEQASL---SEYRAGV----------RRSQADIIVATPGRLVDHINKKSGLKLDQ 192
Query: 198 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
L +L++DE DR++ +QAWL V++ T R +AS+ + + C
Sbjct: 193 LRFLIIDEADRMIDSMHQAWLSQVVKATYGTGGGR--EASSIFSRSEAA------CATAA 244
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET------------RYKLP 304
P L K++ SATLTQ+P KL QLDLH P LF +T R+ P
Sbjct: 245 SLSPPQMP-LQKLLFSATLTQNPEKLQQLDLHQPRLFSSTHRQADATVPAAQKAERFDFP 303
Query: 305 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 350
+ L + + C KPL ++ + + + FT+S ++ HRL +
Sbjct: 304 QGLSEFYVPCTLSRKPLLILHFILRMKLSPILCFTNSRQAAHRLIS 349
>gi|401883807|gb|EJT47994.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 743
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 189/357 (52%), Gaps = 46/357 (12%)
Query: 28 PLDHLPCLDP---RLKVALQNMGISSLFPVQVAVWQETIGPGL----FER--DLCINSPT 78
PL L P R + L+++GIS F VQ A+ + + L FE+ D +++PT
Sbjct: 287 PLSELTETTPISERTQKRLKDLGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAPT 346
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKTL+Y +PIV+ LS R V LRAL+VLPTRDL QVK+ ++ GL+ A Q
Sbjct: 347 GSGKTLAYTVPIVEILSKRIVTRLRALIVLPTRDLVTQVKETLEEVSKGSGLTHSFAHEQ 406
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
+ + D QS +DIL+ATPGRLMDH+ T+GFTL+HL
Sbjct: 407 TLLVDGA------------------------QSKLDILIATPGRLMDHLAMTKGFTLQHL 442
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
+LV+DE DRLL ++Q WL VL R ++ ++ S +L G+ RG
Sbjct: 443 RFLVIDEADRLLSSSFQNWLSQVLDQCRP---HKHANGEELAGSQV-ALAWSEPMGLSRG 498
Query: 259 -FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------YKLPERLES 309
F+ K++ SATLT+DP K+AQL+L P + TR ++LP L
Sbjct: 499 DFEGSQVIPSSKLLFSATLTRDPAKVAQLNLTSPEYYIVSSTRSITQIGQAFELPSSLTE 558
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+I +LKPL L+ LL S G IVFT SV++ RL LL +F + I K+ S
Sbjct: 559 RSIILPPQLKPLNLLYLLHSEGAAPSIVFTKSVDAASRLVRLLTYFEQAYIGGKKLS 615
>gi|432947382|ref|XP_004084018.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oryzias latipes]
Length = 632
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 190/385 (49%), Gaps = 59/385 (15%)
Query: 11 VLP-WMRSPVDVSLFEDCPLDHLP-CLD----PRLKVALQNMGISSLFPVQVAV------ 58
VLP W+ P ++ D + LP C++ P+L+ LQ+ G+ FPVQ V
Sbjct: 141 VLPQWLAQPD--AICRDIKNNLLPVCVESPLCPQLQKKLQDNGVHHFFPVQAEVIPAILD 198
Query: 59 ---WQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
+G G F RD+C+++PTGSGKTL++ LP++Q L R V +RAL VLPT++LA
Sbjct: 199 AAQHGSLLGRGGFRPRDICVSAPTGSGKTLAFVLPVIQVLMTRMVCEVRALAVLPTKELA 258
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
QV VF A L V + GQ S A E + L ++ G+ +S D
Sbjct: 259 QQVYKVFGTYAEGTPLRVLMLAGQKSFAAEQASL---SEIRGGV----------RRSTAD 305
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I+VATPGRL+DHIN G L+ L +L++DE DR++ +Q+WL V TR
Sbjct: 306 IIVATPGRLVDHINKNSGLCLQQLRFLIIDEADRMIDSMHQSWLSLV---TR-------- 354
Query: 235 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+ + P L + P L K++ SATLTQ+P KL QL LH P
Sbjct: 355 --AVYGPETTKLLGRTEPACITAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLF 412
Query: 295 TTGET-------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
++ + R+ P+ L Y + C KPL ++ + + + FT+S
Sbjct: 413 SSAHSNDPPADATALKPERFDFPQGLTEYYVPCTLSKKPLLILHFILRMKLHPILCFTNS 472
Query: 342 VESTHRLCTLLNHFGELRIKIKEYS 366
E+ HRL L+ FG ++ E+S
Sbjct: 473 RETAHRLYLLVQLFGG--VQAAEFS 495
>gi|406696286|gb|EKC99578.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 743
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 187/357 (52%), Gaps = 46/357 (12%)
Query: 28 PLDHLPCLDP---RLKVALQNMGISSLFPVQVAVWQETIGPGL----FER--DLCINSPT 78
PL L P R + L+++GIS F VQ A+ + + L FE+ D +++PT
Sbjct: 287 PLSELTETTPISERTQKRLKDLGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAPT 346
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKTL+Y +PIV+ LS R V LRAL+VLPTRDL QVK+ ++ GL+ A Q
Sbjct: 347 GSGKTLAYTVPIVEILSKRIVTRLRALIVLPTRDLVTQVKETLEEVSKGSGLTHSFAHEQ 406
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
+ + D QS +DIL+ATPGRLMDH+ T+GFTL+HL
Sbjct: 407 TLLVDGA------------------------QSKLDILIATPGRLMDHLAMTKGFTLQHL 442
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
+LV+DE DRLL ++Q WL VL R + L + +L G+ RG
Sbjct: 443 RFLVIDEADRLLSSSFQNWLSQVLDQCRPHKPANGEE----LAGSQVALAWSEPMGLSRG 498
Query: 259 -FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------YKLPERLES 309
F+ K++ SATLT+DP K+AQL+L P + TR ++LP L
Sbjct: 499 DFEGSQVIPSSKLLFSATLTRDPAKVAQLNLTSPEYYIVSSTRSITQIGQAFELPSSLTE 558
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+I +LKPL L+ LL S G IVFT SV++ RL LL +F + I K+ S
Sbjct: 559 RSIILPPQLKPLNLLYLLHSEGAAPSIVFTKSVDAASRLVRLLTYFEQAYIGGKKLS 615
>gi|189217546|ref|NP_001121235.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Xenopus laevis]
gi|169642008|gb|AAI60740.1| LOC100158308 protein [Xenopus laevis]
Length = 678
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 198/398 (49%), Gaps = 62/398 (15%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+A +K +PVLP W+ P + ++ ++ P+ +P L P++ L+ + FPVQ V
Sbjct: 179 KAVEKVLPVLPQWLTQPSFLQKNIKQNLVPIHDIPGLHPKVLKKLEVNKVKDFFPVQAEV 238
Query: 59 WQETI---------GPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+ G G + D+C+++PTGSGKTL++ +PIVQTL R V +RALVVL
Sbjct: 239 IPAVLDSSCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQTLLQRVVCEVRALVVL 298
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PT++LA QV VF +GL V + GQ S E LI++
Sbjct: 299 PTKELAQQVCKVFNTYVDGMGLKVVMIAGQKSFLKEQESLIQKTAF-------------G 345
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
S DILV TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V +
Sbjct: 346 FSSLADILVCTPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLNHVTKAVF-- 403
Query: 229 NENRFSDAST---FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
R S F G L C P L K++ SATLTQ+P KL Q
Sbjct: 404 ---RLEAGSPNMLFTRKEPGILTAASSC-----LHQTP---LQKLLFSATLTQNPEKLKQ 452
Query: 286 LDLHHP-LFLT--------TGETR--------YKLPERLESYKLICESKLKPLYLVALLQ 328
L L+ P LF++ + ET+ + LPE L Y + C KPL L+ L
Sbjct: 453 LGLYQPRLFISKQKGNPNDSSETQMEPSISGNFSLPEGLTHYYIPCNLNSKPLILLHFLL 512
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
SL + + FT+S +++HRL L+ FG I + E+S
Sbjct: 513 SLRFSRVLCFTNSRDASHRLYLLIRSFG--GIDVAEFS 548
>gi|161611979|gb|AAI55869.1| LOC100135117 protein [Xenopus (Silurana) tropicalis]
Length = 644
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 186/377 (49%), Gaps = 60/377 (15%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K +PVLP W+ P V ++ ++ P+ + CL P++ L+ + LFPVQ A
Sbjct: 155 EKVLPVLPQWLAQPSLVQKNIKQNLVPIHDIHCLHPKVLKKLEANKVKYLFPVQAEVIPA 214
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R V +RALVVLPT+
Sbjct: 215 ILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQRVVCEVRALVVLPTK 274
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV VF +GL V + GQ S E LI + G C S
Sbjct: 275 ELAQQVCKVFNTYVDGMGLKVVMVTGQKSFLKEQESLIHKTAF--GFC-----------S 321
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL---TRSD 228
DILV TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V + +D
Sbjct: 322 LADILVCTPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVVAD 381
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ N F G L C P L K++ SATLTQ+P KL QL L
Sbjct: 382 SPNML-----FTRKEPGILTAASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGL 428
Query: 289 HHPLFLTTGET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLG 331
+ P T+ + + LPE L Y + C KPL L+ L SL
Sbjct: 429 YQPRLFTSKQKGTSDDSSETQMESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLR 488
Query: 332 EEKCIVFTSSVESTHRL 348
+ + FT+S +++HR
Sbjct: 489 FSRVLCFTNSRDASHRF 505
>gi|66800335|ref|XP_629093.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
gi|74896742|sp|Q54BD6.1|DDX51_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx51; AltName:
Full=DEAD box protein 51
gi|60462461|gb|EAL60682.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
Length = 563
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 194/350 (55%), Gaps = 40/350 (11%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L+ I +LFPVQ V T G D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 30 LKEQSIINLFPVQQEIVPFINRTEG-----HDICVCAPTGSGKTLAYAIPLVQKIVKRVV 84
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R +R V++PT DL +QV+ F +I L V L++G E LIK
Sbjct: 85 RRVRVAVIVPTHDLVIQVEKTFQSIIKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHAL 143
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
Y +S VDI+V+TPGR++DHIN T GFTL++L YLV+DE DRLLR+++Q WL
Sbjct: 144 Y---------ESLVDIIVSTPGRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLE 194
Query: 220 TVLQLTRSDNE-NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP------RLVKMVL 272
V+ T ++ N+ + ++ G ++ + + ++ +LVK++L
Sbjct: 195 IVIDSTNQHSDLNQQQEEQLIKYNSKGDIELFEKSISLKDNNNQMNHLCWSEFKLVKLLL 254
Query: 273 SATLTQDPNKLAQLDLHHPLFLTTGET---RYKLPERLESYKLICESKLKPLYLVALL-Q 328
SAT+T +P+K++ L L+ PLF TT +T +Y +P L+ +I KPL L+ ++ +
Sbjct: 255 SATMTYNPSKISLLQLNAPLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYE 314
Query: 329 SL--------GEEKCIVFTSSVESTHRLCTLLNHFGE---LRIKIKEYSG 367
SL ++K I FT SV+ THRL TLL G+ L+ +EYS
Sbjct: 315 SLLKNNANGENKKKIICFTKSVDITHRLNTLLKLIGQVDKLKFTCEEYSS 364
>gi|340368286|ref|XP_003382683.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Amphimedon
queenslandica]
Length = 640
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 182/357 (50%), Gaps = 53/357 (14%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETI----GP------GLFERDLCINSPTGSGKT 83
L+P + L M ++SLFPVQ V E + GP G D+CI +PTG GKT
Sbjct: 168 ALNPIITDNLHKMSVTSLFPVQCVVLPELLSSSHGPLLSTVSGAPPSDMCICAPTGCGKT 227
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG--QSSI 141
LSY +PIV +L NR R L+ALVV+P++DLALQV +VF +++ + +G AVG +S
Sbjct: 228 LSYVVPIVSSLLNRITRELKALVVVPSKDLALQVYNVFVSVSKGTRVRIG-AVGSQNTSF 286
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+ E +LI + P AVD+LVATPGRL+ H+ T +L L YL
Sbjct: 287 SVEQKQLISH--------HGP---------AVDVLVATPGRLVRHLQETPFLSLASLRYL 329
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD-ASTFLPSAFGSL-------KTIRRC 253
V+DE DR+ ++Y WL TV+ R + + +S+ +P + L ++
Sbjct: 330 VIDEADRIFEQSYHNWLNTVMDSIRETHSSGHCPLSSSCIPRMYPELWKPSFSKSLLKHK 389
Query: 254 GVE------RGFKDKPYPR---LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 302
G+ D YP L K++ SATL+ DP +L L L+ P T +
Sbjct: 390 GMHTDSQLSSSINDLIYPAAAPLQKLLFSATLSLDPEQLHLLQLYRPKLFTATPALQEDL 449
Query: 303 ----LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
LP L+ Y + C S KPL L+ L+ + + + FT S ESTHRL LL +
Sbjct: 450 GQSILPSTLKEYSISCSSDYKPLVLLHLILTFDHHRILCFTHSRESTHRLTLLLKEY 506
>gi|260801978|ref|XP_002595871.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
gi|229281121|gb|EEN51883.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
Length = 806
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 194/376 (51%), Gaps = 47/376 (12%)
Query: 14 WMRSPVDVSLFED------CPLDHLPCLDPRLKVALQNMGISSLFPVQV----AVWQETI 63
W+ P S+ E+ P++ P + L+ L+ G+ +LFPVQ AV ++
Sbjct: 289 WLADP---SVIENDIQSNLVPVEGTPYVGEFLRNKLKENGVENLFPVQHQVIPAVLEDAE 345
Query: 64 GPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ R D+C+++PTGSGKTL++ +P+VQ L R V +RALVVLPT+DLA+Q+
Sbjct: 346 DGTIMGRAGFRPSDICVSAPTGSGKTLAFVIPVVQALLQRVVCEVRALVVLPTKDLAVQI 405
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
VF L V GQ S+A E + L+K E+ Y QS DI+V
Sbjct: 406 YKVFNHYTSGSRLKVANCSGQKSLAAERNALVK----ESHGVY---------QSLADIVV 452
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS-DA 236
ATPGRL+DHI T GF L HL YLV+DE DR+L + Q WL V TR+ E + S +
Sbjct: 453 ATPGRLVDHIEKTPGFNLRHLRYLVIDEADRMLDQIKQDWLAKV---TRAVYEGQGSTEE 509
Query: 237 STFLPSAF--GSLKTIRRCG-VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
LP G L G + + Y L K++ SATL+Q+P KL QL+L HP
Sbjct: 510 KPGLPMMLWAGVLGGRTAPGPLTAANAARMYQPLQKLLFSATLSQNPEKLQQLNLFHPRL 569
Query: 294 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCT 350
T+ R+K +R + S+ K ++ G +K + FT S+ESTHRL
Sbjct: 570 FTSV-VRHK--QRKQETASAGSSEEKGTFVGKFTTPAGLQKFQHVLCFTGSLESTHRLYL 626
Query: 351 LLNHFGELRIKIKEYS 366
L FG + + E+S
Sbjct: 627 LAKLFG--GVTVAEFS 640
>gi|195428034|ref|XP_002062080.1| GK17342 [Drosophila willistoni]
gi|194158165|gb|EDW73066.1| GK17342 [Drosophila willistoni]
Length = 681
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 186/365 (50%), Gaps = 53/365 (14%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
L L L + AL+ M I FPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 141 LQQLGYLKSFTRQALKQMKIKRPFPVQRAVIPWILEAHAKPEPFRPRDICVSAPTGSGKT 200
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIAD 143
L++A+PIVQ LS R +RALVVLP +LALQV V +++ L V L Q + D
Sbjct: 201 LAFAIPIVQLLSQRVECKVRALVVLPVAELALQVYKVISSLCSKTELEVCLLSKQHRLED 260
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
E +L+ +L G Y S VDI+V TPGRL+DH++AT+GF L+ L +LV+
Sbjct: 261 EQEKLL---ELYKGKYY----------SKVDIVVTTPGRLVDHLHATKGFCLKSLQFLVI 307
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE DR++ +Q WL + R + S T P + L + F +P
Sbjct: 308 DEADRIMDAVFQNWLYHLDTHVRETTDQLLS--GTQAPLCYAELLS--------SFGKQP 357
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-----------GET---------RYKL 303
+ K++ SATL+QDP KL L L P TT G+T +Y
Sbjct: 358 H----KLLFSATLSQDPEKLQNLRLFQPKLFTTVLNLPVFQLNEGKTDSVQDQIVGKYTT 413
Query: 304 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKI 362
P L + E +LKPL L AL+Q ++ + F++S ++ +RL +L F I +
Sbjct: 414 PAELTEQYCVTEMRLKPLTLFALIQQYKWKRFLCFSNSADTANRLAFVLKILFQSYDITV 473
Query: 363 KEYSG 367
+E SG
Sbjct: 474 EELSG 478
>gi|195376467|ref|XP_002047018.1| GJ12159 [Drosophila virilis]
gi|194154176|gb|EDW69360.1| GJ12159 [Drosophila virilis]
Length = 680
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 192/381 (50%), Gaps = 65/381 (17%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
+ LP L+ L+ M I LFPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 145 IKQLPYLEKNTCSVLKQMKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKT 204
Query: 84 LSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
L++A+PIVQ L+ R V+C +RALVVLP +LALQV VF A+ L V L Q +
Sbjct: 205 LAFAIPIVQLLAKR-VQCKVRALVVLPVAELALQVYKVFNALCSKTELEVCLLSKQHRLE 263
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
DE +L+++ K G+ Y S VDI+V TPGRL+DH++AT+GF L+ L +LV
Sbjct: 264 DEQEKLLEQYK---GVYY----------SKVDIVVTTPGRLVDHLHATKGFCLKSLQFLV 310
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE--RGFK 260
+DE DR++ +Q WL + R+ + + L C E +
Sbjct: 311 IDEADRIMDAVFQNWLYHLDTHVRTTTDQLLTGVQAPL------------CYQELLNSYG 358
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET--------------------- 299
+P+ K++ SATL+QDP KL L L P TT T
Sbjct: 359 KQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTVLTMPALQLGLGNAEQPEQGVEQS 414
Query: 300 -----RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+Y P L + E +LKPL L A++ G ++ + FT+S ++ +RL +L
Sbjct: 415 SQFIGKYTTPAELTEQYCLTEMRLKPLTLYAMVLLNGWKRFLCFTNSADTANRLAFVLQQ 474
Query: 355 -FGELRIKIKEYSGLQRQSVR 374
FG +++E S ++R
Sbjct: 475 LFGGSPTRVEELSAKMSAAMR 495
>gi|195495021|ref|XP_002095090.1| GE22191 [Drosophila yakuba]
gi|194181191|gb|EDW94802.1| GE22191 [Drosophila yakuba]
Length = 681
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 199/410 (48%), Gaps = 66/410 (16%)
Query: 5 KKKSMPVLPWMRSPVDV---SLF--EDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + SL E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVEMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W + P RD+C+++PTGSGKTL++A+PIVQ LS R +RAL+VLP
Sbjct: 165 KQVIPWILEAQAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVECKVRALIVLPV 224
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V +A+ L V L Q + DE +L+++ K G Y
Sbjct: 225 AELALQVYRVVSALCSKTELEVCLLSKQHKLEDEQEKLVEQYK---GKYY---------- 271
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S DI+V TPGRL++H++AT+GF L+ L +LV+DE DR++ +Q WL + + +
Sbjct: 272 SKADIVVTTPGRLVEHLHATKGFCLKSLTFLVIDEADRIMDAVFQNWLYHLDSHVKETTD 331
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L++ F +P+ K++ SATL+QDP KL L L
Sbjct: 332 QLL--AGTQAPLCYAELQS--------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQ 377
Query: 291 PLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLVA 325
P TT T RY P L + E +LKPL + A
Sbjct: 378 PRLFTTVLTMPVLKDVTEGDADTEANTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVYA 437
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
L++ ++ + FT+S + RL +L+ + K+ E SG +R+
Sbjct: 438 LVEKYQWKRFLCFTNSSDQASRLTFVLSLLFQNGTKVAELSGNLSAKIRK 487
>gi|330793373|ref|XP_003284759.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
gi|325085359|gb|EGC38768.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
Length = 565
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 36/346 (10%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFE---RDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L + ++ LFPVQ + I P + D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 24 LNEISVTGLFPVQ-----QEIVPFISRAEGHDICVCAPTGSGKTLAYAIPLVQKIVKRVV 78
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R +R +V++PT DL +QV+ F +I L V ++G E L+K
Sbjct: 79 RRIRVVVIVPTHDLVIQVEKTFQSIIKGTDLIVQ-SLGVKPFHVEQKLLVKNHSYGEHAL 137
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
Y +S VDI+V+TPGRL+DHIN T+GFTL++L YLV+DE DRLLR+++Q WL
Sbjct: 138 Y---------ESLVDIIVSTPGRLVDHINETQGFTLKYLNYLVIDEADRLLRQSFQDWLE 188
Query: 220 TVLQLTRSDNENRFSDASTFLP-SAFGSLK-------TIRRCGVERGFKDKPYPRLVKMV 271
V+ T + N + + + F+ + G+++ IR + +LVK++
Sbjct: 189 IVIDSTNNLNNDIGNSNNNFIKYNEKGNIEINELPINIIRDNNNQENHLCWSEFKLVKLL 248
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGET---RYKLPERLESYKLICESKLKPLYLVAL-- 326
LSAT+T +P+K++ L L+ PLF TT +T +Y +P L+ +I KPL L+ +
Sbjct: 249 LSATMTYNPSKISLLQLNAPLFFTTSKTKEIKYTMPSTLKESYIITNPDQKPLVLLNIIY 308
Query: 327 --LQSLGEEKCIVFTSSVESTHRLCTLLNHFG---ELRIKIKEYSG 367
L++ +K I FT SV+ THRL +LL G ++ +EYS
Sbjct: 309 ETLKNDSNKKIICFTKSVDITHRLNSLLKLIGSVDNIKFTCEEYSS 354
>gi|303273266|ref|XP_003055994.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462078|gb|EEH59370.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 526
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 192/398 (48%), Gaps = 59/398 (14%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERD 71
+ W SPV + + HL + + + LQ G+ + VQ A W T G F+ D
Sbjct: 1 MSWFNSPVSLLDLGENETTHLRGIHNKFRSVLQVSGLDQVLTVQSATWLATGGGMCFDCD 60
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNR-AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
+C+ PTGSGKTL+YALP++Q L++R +R RAL+V+PT DLA QV + + + A GL
Sbjct: 61 ICVRGPTGSGKTLAYALPLLQALASRPGLREQRALIVIPTLDLATQVSQLLSPLCDATGL 120
Query: 131 SVGLAV---GQSSIADEIS----ELIKRPKLEAGICYDPED---VLQELQSAVD------ 174
+VG+ + + D ++ + RP A + P D V ++ A D
Sbjct: 121 TVGVPLRTHQDKCLVDRLTLENLATLNRPS-HAALILQPVDHKIVRARIRQATDFSNAIP 179
Query: 175 ----------ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 224
++VATPGRL+ H+ L L +LV+DE DR+LR++YQ +
Sbjct: 180 LDSASEERFDVMVATPGRLVAHVKEVYYQLLSGLEFLVIDEADRVLRQSYQGCI------ 233
Query: 225 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 284
+ + S G+ R G + RL K+++SATLT D + A
Sbjct: 234 -------------SLIDSGVGA----RSPHTGNGDRSVSSRRLRKLLISATLTHDSVRFA 276
Query: 285 QLDLHHPLFLTTG--------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
L L+ P + + +++Y +P L+ ++ E+ KPL L ALL+ +G I
Sbjct: 277 HLHLNSPRVIQSSAYESDSLCDSQYVIPSDLDENFIVTEAIKKPLALCALLKRIGRVPVI 336
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VFTSSV THRL LL+ L EYS Q VR
Sbjct: 337 VFTSSVAITHRLFLLLDSIKGLPSSAVEYSSSFSQGVR 374
>gi|307104244|gb|EFN52499.1| hypothetical protein CHLNCDRAFT_138879 [Chlorella variabilis]
Length = 576
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 124/198 (62%), Gaps = 20/198 (10%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVLPWMR P+ + E L+ + LDPRL+ AL+ GI LFPVQ W+ET G
Sbjct: 117 KAAPVLPWMRVPIAIEASEGTLLEEVQGLDPRLRRALEGTGIEVLFPVQTVAWRETAGGA 176
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
D+CI +PTGSGKTLSYALP++Q LS RAV LRALVVLPTRDLA+QV V A + P
Sbjct: 177 SPAHDICICAPTGSGKTLSYALPVLQALSGRAVPRLRALVVLPTRDLAVQVFGVLAGLCP 236
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
A+GL+ LA G++S+A E L VDILVATPGRL+ H
Sbjct: 237 ALGLAACLAAGKASLAAEAQLLA--------------------SGGVDILVATPGRLIAH 276
Query: 187 INATRGFTLEHLCYLVVD 204
+ T GFTL HL +LV+D
Sbjct: 277 LEGTPGFTLRHLRFLVID 294
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 285 QLDLHHPLFLTTG--ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 342
+L LH P ++ + RY+LP L+ KL+ ++ KP L ALLQ L E+ IVFTSSV
Sbjct: 295 RLGLHCPRYIAMSAVDHRYQLPRSLQELKLVVPAERKPAALAALLQELRGEQTIVFTSSV 354
Query: 343 ESTHR 347
E+THR
Sbjct: 355 EATHR 359
>gi|170032268|ref|XP_001844004.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
gi|167872120|gb|EDS35503.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
Length = 695
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 195/391 (49%), Gaps = 69/391 (17%)
Query: 13 PWMRSP--VDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE 69
PW+ P +D L + + L LD ++K L+ +G LFPVQ ET+ P + +
Sbjct: 123 PWLSHPTVIDSDLSKKGKSIKKLGYLDDQVKANLKKLGFKRLFPVQ-----ETVIPWILD 177
Query: 70 ----------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
RD+CI+SPTGSGKTL++A+P+VQ L NR +RALV+LP ++LA QV
Sbjct: 178 AHQKPTPFWPRDVCISSPTGSGKTLAFAVPVVQLLLNRIAPAIRALVILPVKELAEQVFG 237
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
VF + + L + + + E S+L+ R E Y P+ VDI+V T
Sbjct: 238 VFEKLCEGTKIRPLLLSRKQTFSVEQSKLVARFNGE----YIPK---------VDIVVTT 284
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
GRL++H+++T GFTL+HL +L++DE DR++ + WL + + + +++
Sbjct: 285 AGRLVEHLHSTTGFTLKHLRFLIIDEADRVMDQIQNDWLYHLNKHVKQESD------EYL 338
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT---- 295
L A G L + DKP + K++ SATL+QDP KL L HP T
Sbjct: 339 LGRAAGQLS-------QSELFDKPR-QPHKLLFSATLSQDPEKLNTFKLFHPKLFTAVSD 390
Query: 296 --------------TGETR------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
E R Y P L + + K+KPL L AL++ G ++
Sbjct: 391 PAKRLAALVRHHQQAEEKRGKFIGQYATPMELRELVCMTQFKIKPLTLFALIKENGYKRF 450
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
+ FT+S++ +HRL +L + I+E+S
Sbjct: 451 LCFTNSIDGSHRLSFVLQKMFGTELVIEEWS 481
>gi|195590910|ref|XP_002085187.1| GD12444 [Drosophila simulans]
gi|194197196|gb|EDX10772.1| GD12444 [Drosophila simulans]
Length = 687
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 194/411 (47%), Gaps = 67/411 (16%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK +M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVNMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V +A+ L L Q + DE +L+++ K G Y
Sbjct: 225 AELALQVYRVISALCSKTDLEACLLSKQHKLEDEQEKLVEQYK---GKYY---------- 271
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S DI+V TPGRL++H++AT+GF L+ L +L++DE DR++ +Q WL + + +
Sbjct: 272 SKADIVVTTPGRLVEHLHATKGFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTD 331
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L+ F +P+ K++ SATL+QDP KL L L
Sbjct: 332 QLL--AGTQAPLCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQ 377
Query: 291 PLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLVA 325
P T T RY P L + E +LKPL + A
Sbjct: 378 PRLFATVLTMPVLKDATEEGSDTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFA 437
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRR 375
L++ ++ + FT+S + RL +L F + K+ E SG VR+
Sbjct: 438 LVEKYKWKRFLCFTNSSDQASRLTFVLEVLFQKYNTKVSELSGNLSAKVRK 488
>gi|195328224|ref|XP_002030816.1| GM24369 [Drosophila sechellia]
gi|194119759|gb|EDW41802.1| GM24369 [Drosophila sechellia]
Length = 687
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 193/411 (46%), Gaps = 67/411 (16%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK +M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVNMQLPNWLAHPTIIEGGSLQPEEEVPTSEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V +A+ L L Q + DE +L+++ K G Y
Sbjct: 225 AELALQVYRVISALCSKTDLEACLLSKQHKLEDEQEKLVEQYK---GKYY---------- 271
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S DI+V TPGRL+DH++AT+GF L+ L +L++DE DR++ +Q WL + + +
Sbjct: 272 SKADIVVTTPGRLVDHLHATKGFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTD 331
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L+ F +P+ K++ SATL+QDP KL L L
Sbjct: 332 QLL--AGTQAPLCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQ 377
Query: 291 PLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLVA 325
P T T RY P L + E +LKPL + A
Sbjct: 378 PRLFATVLTMPVLKDATEEGSDTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFA 437
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRR 375
L++ ++ + FT+S + RL +L F + + E SG VR+
Sbjct: 438 LVEKYKWKRFLCFTNSSDQASRLTFVLKVLFQKYSTNVSELSGNLSAKVRK 488
>gi|193596603|ref|XP_001949748.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 188/389 (48%), Gaps = 66/389 (16%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ--V 56
+ KK VLP W+ P VS+ + P+D +P LDP L L+N G + FPVQ +
Sbjct: 19 KKNKKVKRVLPDWLAKPTVVSVDLKHLEVPIDGIPELDPALVQKLKNKGCTHFFPVQNQL 78
Query: 57 AVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
W + + RDLCI++PTGSGKTLSY LPI+QTL + LRAL+VLPT+DL
Sbjct: 79 VPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQLRALIVLPTKDL 138
Query: 114 ALQVKDVF-AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
A+QV VF I A L V L ++ ++ E I + YD +L
Sbjct: 139 AVQVYKVFLYYIKNAFDLRVLLLESKNMTLEKEKERI--------VQYDSSIGWIDL--- 187
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
VDI+V TPGRL+DH+ T GF+L++L +LV+DE D WL ++
Sbjct: 188 VDIIVTTPGRLVDHLYYTEGFSLKNLRFLVLDEADSFTNILQNEWL------------HK 235
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+D+ + +L T+ D P R +++ SATLTQDP KL L L P
Sbjct: 236 VNDSLAYNGPTKCTLNTLN---------DSP-QRTQRLLFSATLTQDPEKLKFLKLFEPK 285
Query: 293 FL--------------TTGET---------RYKLPERLESYKLICESKLKPLYLVALLQS 329
TTG +Y P+ L+ Y ++C + KPL L L++S
Sbjct: 286 LFTSIIKRKNTQLPTDTTGTDEPVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRS 345
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
G ++ I F S HRL LL E
Sbjct: 346 KGLKRVICFVKSKIEVHRLTRLLCKLSEF 374
>gi|403417594|emb|CCM04294.1| predicted protein [Fibroporia radiculosa]
Length = 707
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 172/366 (46%), Gaps = 74/366 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE---------RDLCINSPTGSGKTLS 85
L + K L +GIS LF VQ AV + P + RDLC+++PTGSGKTL+
Sbjct: 201 LSEKTKKRLLELGISELFAVQTAVVPFLLTPKSLKSLYLPYNPPRDLCVSAPTGSGKTLA 260
Query: 86 YALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
Y LPIV+ LS R V LRALVVLPTRDL QV++ F AI GL +G A GQ S E
Sbjct: 261 YVLPIVEILSTRIVVRLRALVVLPTRDLVTQVRETFEAIGRGRGLKIGTATGQHSFTHEQ 320
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR-GFTLEHLCYLVVD 204
++L+ ++ ++ TR G L HL +LV+D
Sbjct: 321 AQLVADRSSQSVSLFE----------------------------TRTGSQLMHLRFLVID 352
Query: 205 ETDRLLREAYQAWLPTVLQLTR-SDNENRFSDASTFLPSAFGSLKTIRRCG--------- 254
E DRLL +++Q WL VL TR N +++ T ++ +TI R
Sbjct: 353 EADRLLAQSFQDWLAQVLAATRPPANPEDLTESRTLADNSMAR-RTIPRADALAPNYLHL 411
Query: 255 ------VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--------TTGET- 299
V +K K++ SATLT+DP+K+ L+LH P + T +T
Sbjct: 412 LHDVPRVRTDIDEKRESSCQKLLFSATLTRDPSKIVALNLHDPKYFVVRGRADGTAADTE 471
Query: 300 ----------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 349
++ +P L + ++C+S KPL L L+ G +VFT S EST RL
Sbjct: 472 EADLMSLVMEKFTMPSSLSEHMIVCDSASKPLMLFQLVHGHGVTNALVFTKSAESTTRLM 531
Query: 350 TLLNHF 355
L F
Sbjct: 532 RLFEFF 537
>gi|17136666|ref|NP_476833.1| dead box protein 73D [Drosophila melanogaster]
gi|12644178|sp|P26802.3|DDX51_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp73D;
Short=DEAD box protein 73D
gi|4972732|gb|AAD34761.1| unknown [Drosophila melanogaster]
gi|7294064|gb|AAF49419.1| dead box protein 73D [Drosophila melanogaster]
gi|33589494|gb|AAQ22514.1| LD27814p [Drosophila melanogaster]
Length = 687
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 193/411 (46%), Gaps = 68/411 (16%)
Query: 5 KKKSMPVLP-WMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPV 54
KKK LP W+ P + E+ P +D L L+ AL+ M I LFPV
Sbjct: 104 KKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPV 163
Query: 55 QVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 164 QKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLP 223
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
+LALQV V + + L V L Q + DE +L+++ K G Y
Sbjct: 224 VAELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYK---GKYY--------- 271
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + +
Sbjct: 272 -SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETT 330
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ A T P + L+ F +P+ K++ SATL+QDP KL L L
Sbjct: 331 DQLL--AGTQAPLCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLF 376
Query: 290 HPLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLV 324
P T T RY P L + E +LKPL +
Sbjct: 377 QPRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVF 436
Query: 325 ALLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVR 374
AL++ ++ + FT+S + RL +L F + K+ E SG VR
Sbjct: 437 ALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVR 487
>gi|405968018|gb|EKC33126.1| ATP-dependent RNA helicase DDX51 [Crassostrea gigas]
Length = 1179
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 158/313 (50%), Gaps = 46/313 (14%)
Query: 11 VLP-WMRSP--VDVSLFEDCPL-DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG-- 64
VLP W+ SP + L + L LDP + + L+ I FPVQ+ V E +
Sbjct: 212 VLPDWLSSPNVIASDLKQKTTLVSEFKGLDPDIHLNLKENKIDYFFPVQMQVIPEILDTV 271
Query: 65 --------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
G D+C+++PTGSGKTL++ LPIVQ L +R + +RA+VVLP RDLA+Q
Sbjct: 272 RYGFVLGRAGFRPPDICVSAPTGSGKTLAFVLPIVQALKSRVLCRIRAMVVLPVRDLAVQ 331
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V VF L VG+ VGQ + E L+++ + L+S VDI+
Sbjct: 332 VFKVFLQYTKGTNLKVGMIVGQKQFSVEQHALVRQR-------------VGGLESKVDIV 378
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DHIN T GF+L L +LV+DE DR++ Q WL V EN
Sbjct: 379 VATPGRLVDHINKTPGFSLTDLRFLVIDEADRIMEHVKQDWLSHV--------ENAVFSG 430
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
PS SL C K + L K++ SATL+Q+P KL QL+L P T+
Sbjct: 431 GRTAPS---SLNVYNSC--------KHHMPLQKLLFSATLSQNPEKLQQLNLFQPKLFTS 479
Query: 297 GETRYKLPERLES 309
LP LES
Sbjct: 480 VVDGGSLPRPLES 492
>gi|328702076|ref|XP_001949723.2| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 187/389 (48%), Gaps = 66/389 (16%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+ KK VLP W+ P VS+ + P+D +P LDP L L+N G + FPVQ +
Sbjct: 19 KKNKKVKRVLPDWLAKPTVVSVDLKHLEVPIDGIPELDPALVQKLKNKGCTHFFPVQNQL 78
Query: 59 --W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
W + + RDLCI++PTGSGKTLSY LPI+QTL + LRAL+VLPT+DL
Sbjct: 79 VPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQLRALIVLPTKDL 138
Query: 114 ALQVKDVF-AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
A QV VF I A L V L ++ ++ E I + YD +L
Sbjct: 139 AAQVYKVFLYYIKNAFDLRVLLLESKNMTLEKEKERI--------VQYDSSIGWIDL--- 187
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
VDI+V TPGRL+DH+ T GF+L++L +LV+DE D WL ++
Sbjct: 188 VDIIVTTPGRLVDHLYYTEGFSLKNLRFLVLDEADSFTNILQNEWL------------HK 235
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+D+ + +L T+ D P R +++ SATLTQDP KL L L P
Sbjct: 236 VNDSLAYNGPTKCTLNTLN---------DSP-QRTQRLLFSATLTQDPEKLKFLKLFEPK 285
Query: 293 FL--------------TTGET---------RYKLPERLESYKLICESKLKPLYLVALLQS 329
TTG +Y P+ L+ Y ++C + KPL L L++S
Sbjct: 286 LFTSIIKRKNTQLPTDTTGTDEPVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRS 345
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
G ++ I F S HRL LL E
Sbjct: 346 KGLKRVICFVKSKIEVHRLTRLLCKLSEF 374
>gi|499204|gb|AAC14192.1| D-E-A-D box protein [Drosophila melanogaster]
Length = 644
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 192/410 (46%), Gaps = 67/410 (16%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V + + L V L Q + DE +L+++ K G Y
Sbjct: 225 AELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYK---GKYY---------- 271
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + + +
Sbjct: 272 SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTD 331
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L+ F +P+ K++ SATL+QDP KL L L
Sbjct: 332 QLL--AGTQAPLCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQ 377
Query: 291 PLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLVA 325
P T T RY P L + E +LKPL + A
Sbjct: 378 PRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFA 437
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVR 374
L++ ++ + FT+S + RL +L F + K+ E SG VR
Sbjct: 438 LVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVR 487
>gi|194872386|ref|XP_001973017.1| GG15853 [Drosophila erecta]
gi|190654800|gb|EDV52043.1| GG15853 [Drosophila erecta]
Length = 687
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 193/411 (46%), Gaps = 67/411 (16%)
Query: 5 KKKSMPVLPWMRSPVDVSLFEDCPLDHLPC---------LDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + P D +P L+ AL+ M I LFPVQ
Sbjct: 105 KKVEMQLPNWLAHPTIIEGGSLQPEDEIPASEAIDQLDYLEKYTCEALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RAL+VLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVECKVRALIVLPV 224
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
+LALQV V + + L V L Q + DE +++++ K G Y
Sbjct: 225 AELALQVYRVISKLCSKTELEVCLLSKQHKLEDEQEKVVEQYK---GKYY---------- 271
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S DI+V TPGRL++H++AT+GF L+ L +LV+DE DR++ +Q WL + + +
Sbjct: 272 SKADIVVTTPGRLVEHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTD 331
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
A T P + L++ F +P+ K++ SATL+QDP KL L L
Sbjct: 332 QLL--AGTQAPLCYAELQS--------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQ 377
Query: 291 PLFLTT------------GET-------------RYKLPERLESYKLICESKLKPLYLVA 325
P TT GE RY P L + E +LKPL + A
Sbjct: 378 PRLFTTVLTMPVLKDITEGEADTEAHTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFA 437
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRR 375
L++ ++ + FT+S + RL +L F + + E SG VR+
Sbjct: 438 LVEKYKWKRFLCFTNSSDQASRLTFVLKVLFKKYSTIVSELSGNLSARVRK 488
>gi|296423635|ref|XP_002841359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637596|emb|CAZ85550.1| unnamed protein product [Tuber melanosporum]
Length = 627
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 181/364 (49%), Gaps = 81/364 (22%)
Query: 1 MEEAKKKSMPV---LP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
+ +A K +P+ LP W+ +P+ V P + C+ +L L + ++S FPVQ
Sbjct: 196 LTKAAKPQIPLSSALPQWLANPITVDPSRTQPFSEITCVSQKLHSRLSALSMTSAFPVQS 255
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AV + P D+CI++ TGSGKTL+Y LPIVQ LS R V LRA++V+PTR+L Q
Sbjct: 256 AVIPLLLSPD--SGDICISAATGSGKTLAYVLPIVQALSTRVVTRLRAVIVVPTRELVSQ 313
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V V +++ L +G AVG ++ E ++L+ E G S +D+L
Sbjct: 314 VHSVACSLSTGNSLKIGTAVGSKALPLEQAQLVG----EGG----------NGGSKIDVL 359
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL-QLTRSD---NENR 232
V TPGRL++HI T+GFTL+ L +LV+DE DRLL +++Q W+ T++ ++ R D E +
Sbjct: 360 VCTPGRLVEHIKTTKGFTLKFLRWLVIDEADRLLAQSFQEWVSTLIGEIERVDVSAQEEK 419
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDK-PYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
F+ L G + K P R+ K+VLSAT+T+D KL+ L L P
Sbjct: 420 FNSVLEDL-----------------GIRLKPPGSRVRKVVLSATMTRDAGKLSDLKLRKP 462
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ T I+FTSS + RL TL
Sbjct: 463 SMIAT---------------------------------------IIFTSSNSTATRLSTL 483
Query: 352 LNHF 355
L+ F
Sbjct: 484 LSTF 487
>gi|198463449|ref|XP_001352828.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
gi|198151259|gb|EAL30329.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
Length = 697
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 197/409 (48%), Gaps = 75/409 (18%)
Query: 5 KKKSMPVLP-WMRSPVDV---SLFED---------CPLDHLPCLDPRLKVALQNMGISSL 51
+KK VLP W+ P + SL D +++L L + AL+ M I L
Sbjct: 106 RKKVTEVLPPWLAYPTIIEGGSLLPDDDLEAGKDEASIENLSYLKDHTRQALKQMKIKRL 165
Query: 52 FPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRA 104
FPVQ V W Q P L RD+C+++PTGSGKTL++A+PIVQ L+NR VRC +RA
Sbjct: 166 FPVQRTVIPWILEAQGQPAP-LRPRDICVSAPTGSGKTLAFAIPIVQLLNNR-VRCKVRA 223
Query: 105 LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 164
LVVLP +LALQV V A+ L V L Q + DE +L+ ++ G Y
Sbjct: 224 LVVLPVAELALQVFKVIRALCSKTELEVCLLSKQHRLEDEQEKLV---EVYKGQIY---- 276
Query: 165 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 224
S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL +
Sbjct: 277 ------SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAFFQNWLYHLDNH 330
Query: 225 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 284
R A T P L + P+ K++ SAT++QDP KL
Sbjct: 331 VRETANQLL--AGTQPPLCLKELYAT--------YGKVPH----KLLFSATMSQDPEKLQ 376
Query: 285 QLDLHHPLFLTT----------------GET---------RYKLPERLESYKLICESKLK 319
L L P TT ET +Y P L + E ++K
Sbjct: 377 NLRLFQPKLFTTVFALPVPKSDEQADGDEETTPNTGHFAGKYTTPVELTEQFCVTELRIK 436
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSG 367
PL L AL++ ++ + FT+S E+ +RL ++ F K+ E SG
Sbjct: 437 PLTLFALVEKYQWKRFLCFTNSTETANRLAFVMGKLFSTGPTKVAELSG 485
>gi|320169870|gb|EFW46769.1| DEAD-box ATP-dependent RNA helicase 1 [Capsaspora owczarzaki ATCC
30864]
Length = 866
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 169/347 (48%), Gaps = 57/347 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPG---LFERDLCINSPTGSGKTLSYALPIV 91
LDPR+ AL MGI SLFPVQ ++ E +G + DLC++SPTGSGKT+++A+PIV
Sbjct: 266 LDPRVVRALTKMGIQSLFPVQASLLPEILGSASSAVHPGDLCVSSPTGSGKTMAFAIPIV 325
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
LS R V LRAL++ PTR+LA QVK VF ++A L+ L GQ S+A E +L+
Sbjct: 326 NKLSTRVVPRLRALILQPTRELAAQVKSVFDSLAQFTPLTTALITGQLSLAAE-QDLLAA 384
Query: 152 PKLEAGICYDPEDVLQELQSA-----------VDILVATPGRLMDHINATRGFTLEHLCY 200
+ D L +S+ D++VATPGRL+DH+N L+HL Y
Sbjct: 385 GAPSRSVLADSVLALAGNRSSGSAQQATPIVLCDVVVATPGRLVDHLNCNPAL-LDHLEY 443
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA--FGSLKTIRRCGVERG 258
LV+DE DRLL ++Y WLP VL R+ R + S+ SA G + G
Sbjct: 444 LVLDEADRLLSQSYSDWLPRVL-AGRTTRHQRAAAQSSNNASATLAGESGGVGSAGYGMV 502
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQL-------------------------------- 286
+ + K++ SATLT +P K+A L
Sbjct: 503 NNSSSHSIMRKLLFSATLTNNPEKIAALHLVFPRYFVAAPNATLSVKPVAGAGADAATAM 562
Query: 287 ----DLHHPLFLTTGET--RYKLPERLESYKLICESKLKPLYLVALL 327
D PLF G+ R+ LP L ++C+ KPL L L
Sbjct: 563 DTTADGQEPLFDADGDNAARFTLPATLTQEMIVCQLADKPLALAQRL 609
>gi|307209142|gb|EFN86284.1| Probable ATP-dependent RNA helicase Dbp73D [Harpegnathos saltator]
Length = 660
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 184/397 (46%), Gaps = 74/397 (18%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P + L +D L LDP+L AL+ GI LFPVQ +V W +
Sbjct: 165 VLPDWLVHPEVISADLSSGPNIDELHSILDPKLVEALKANGIVKLFPVQSSVIKWLHSCN 224
Query: 65 P----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
G + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVVLP ++LA Q+ V
Sbjct: 225 KDRRVGWWLRDTCVSAPTGSGKTLAYVLPIVQQLQTRLVPKIRCLVVLPVQELAAQIHKV 284
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
L VGL G SS E S +IK+ S VDI++ATP
Sbjct: 285 MVTYTSHTNLKVGLLSGISSFEQEQSSIIKKT------------ARGNYLSTVDIVIATP 332
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+ HI T GF+L+ L +LV+DE DR WL +L
Sbjct: 333 GRLISHILKTPGFSLDFLRFLVIDEADRTTE-----WL-------------------QYL 368
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT----- 295
P F S G + P K++ SATL+QDP KL++L L P+ T
Sbjct: 369 PE-FHSRAHSLTIGNVHSSEIAPAQ---KLLFSATLSQDPEKLSRLGLFQPILFTTVMVT 424
Query: 296 -----------TGE--TRYKLPERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSS 341
TGE RY P L + C ++ KPL L LL K +VFT+S
Sbjct: 425 GKDTDVNLDKMTGEFAGRYTSPGELTELAVECAAEYKPLALYHLLTRHDTISKTLVFTNS 484
Query: 342 VESTHRLCTLLNH-FGELRIKIKEYSGL----QRQSV 373
++ HRL L+ E + + E S QR+SV
Sbjct: 485 GDTAHRLALLIRSLLSERNVTVGELSAQLMPKQRESV 521
>gi|119494337|ref|XP_001264064.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|119412226|gb|EAW22167.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 863
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 183/388 (47%), Gaps = 83/388 (21%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K S LP W+ +PV S + L +D L L++ G F VQ V
Sbjct: 225 EETEKPSYSSLPAWLANPVRESASKRARFSEL-GIDSNLLRVLEDHGYKEAFAVQSTVIP 283
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
+ GP DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q ++
Sbjct: 284 LLLQGPRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELVKQARE 343
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE---------------- 163
A GL +G AVG +I DE +R + CY PE
Sbjct: 344 ACELCATGSGLRIGSAVGNVAIKDE-----QRTLMRVDQCYGPELSKQRQTVDLTGEDWT 398
Query: 164 -------------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+D
Sbjct: 399 NFNLMNYLAETSDLSESLPGYVQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLEWLVID 458
Query: 205 ETDRLLREAYQAWLPTVLQL--TRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKD 261
E DRLL E++Q W+ V+ R D P FGS K + + G+ ++
Sbjct: 459 EADRLLNESFQEWVDVVMNSLDARKD------------PKTFGSSGKFMAQLGLPIQSRE 506
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-------------------TTGETRYK 302
PR K++LSAT+T+D +KL L L +P + TT + ++
Sbjct: 507 ---PR--KVILSATMTRDISKLNSLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFT 561
Query: 303 LPERLESYKL-ICESKLKPLYLVALLQS 329
LP L+ Y + + + KPLYL+ LLQS
Sbjct: 562 LPSTLKEYSVSVGDGSQKPLYLLQLLQS 589
>gi|345492759|ref|XP_001599929.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Nasonia
vitripennis]
Length = 631
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 176/372 (47%), Gaps = 70/372 (18%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHLP-CLDPRLKVALQNMGISSLFPVQVAV--W----Q 60
VLP W+ P V L + LD + LD +L L+ G LFPVQ V W
Sbjct: 145 VLPHWLTHPEIVHSDLSKGPTLDDMQNVLDSKLVDKLKADGFDKLFPVQARVLAWLVKCD 204
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
+ G + RD C++ PTGSGKTL+YALPI+Q L + VR +R L+VLP ++LA QV DV
Sbjct: 205 QDYKTGKWVRDTCVSMPTGSGKTLAYALPIIQLLQHNFVRLVRCLIVLPVQELATQVYDV 264
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
+ + + L G SS +E +L+++ + + I S VDI++ATP
Sbjct: 265 ISKYSTGTSPRIALISGASSFKEEQEKLVQKTEKDDYI------------SRVDIVIATP 312
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DHI T GF+L L +LV+DE DR WL ++
Sbjct: 313 GRLIDHIRKTEGFSLSALRFLVIDEADRATE-----WL-------------------QYI 348
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--- 297
P + V + K++LSATL+QDP KL++L L P+ T+
Sbjct: 349 PFPHSKAPPLSVANVRSSWNTPAQ----KLLLSATLSQDPEKLSRLGLFRPILFTSAVVD 404
Query: 298 ----------------ETRYKLPERLESYKLICESKLKPLYLV-ALLQSLGEEKCIVFTS 340
+RY P L + C + KPL L L++ EK +VFT+
Sbjct: 405 LEKTDKDINLDEDLNVASRYGNPSELTERIVECSIQHKPLALYRQLMKDEVIEKTLVFTN 464
Query: 341 SVESTHRLCTLL 352
S E+ HRL LL
Sbjct: 465 SAEAAHRLAILL 476
>gi|357628805|gb|EHJ77980.1| putative ATP-dependent RNA helicase DDX51 [Danaus plexippus]
Length = 625
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 181/384 (47%), Gaps = 48/384 (12%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSLFED---CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
E K K VLP W+ VS C +++ L L L + G++ FPVQ V
Sbjct: 112 EKKSKVERVLPYWLSHAYSVSKNLQTLTCKVENQSWLHNTLLTTLTSEGVTHFFPVQEQV 171
Query: 59 W----QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
Q+ P L D+C+++PTGSGKTLS+ LPI+Q L N +RALVVLP ++L
Sbjct: 172 IPFIIQQHQHPELLRPHDICVSAPTGSGKTLSFVLPIIQVLMNEIGHHIRALVVLPVQEL 231
Query: 114 ALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 173
A+QV VF GL V L G + + E ++++ + IC +
Sbjct: 232 AIQVAQVFKKYCTNTGLRVQLLSGSTPLQKEQQQIMRFTETLKWIC------------EI 279
Query: 174 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 233
DI+V T GRL++H+ T GF+L++L +LV+DE DR++ WL + + + +N
Sbjct: 280 DIIVCTAGRLVEHLQNTEGFSLKNLKFLVIDEADRIMDNIQNDWLYHMEKHIKMENH--- 336
Query: 234 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
S +P +R V K++ SATL+ DP L + L P
Sbjct: 337 --TSNKVPHLNWVGLNSQRSSVH------------KLLFSATLSPDPELLEEWGLFQPKL 382
Query: 294 L----------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 343
+ +Y P+ L+ ++C ++ KPL L +K + FT+S +
Sbjct: 383 FSAIPIQDHPDSNVSKKYTTPDELQEQYVVCSAEEKPLIFYYFFAELKWDKTLCFTNSSQ 442
Query: 344 STHRLCTLLNHFGELRIKIKEYSG 367
S HRL LLN + + +K+ E S
Sbjct: 443 SAHRLTVLLNIWSKGNLKVAELSA 466
>gi|198425548|ref|XP_002130172.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
[Ciona intestinalis]
Length = 636
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 179/355 (50%), Gaps = 60/355 (16%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVW-------QETIGPGLFE-RDLCINSPTGSG 81
D P +D L L+++GI+ LFPVQ V Q +I LF RDLC+++PTGSG
Sbjct: 176 DIQPNIDQVLIQNLKDIGITQLFPVQQKVIPYILRDAQRSISHQLFPPRDLCVSAPTGSG 235
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS-VGLAVGQSS 140
KT+++ALPIVQ L R V RALVV PTR+L+ Q+ VF ++ L + + + S
Sbjct: 236 KTIAFALPIVQALLQRVVPATRALVVSPTRELSAQIYKVFVSLCRNTQLKCILITAAKGS 295
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
+ E L+ K L DI+VATPGRL DH++ T F+L+ L +
Sbjct: 296 LLQEQRALLNFGK-------------TGLACPADIVVATPGRLADHLSQTSAFSLDKLRF 342
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR++ + +Q WL V Q + D+ LP +LK++ + +
Sbjct: 343 LVIDEADRMMEQIHQRWLTLVEQKV-------YKDSFKPLPQHL-ALKSVTKNRIP---- 390
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE-----------------TRYK 302
L K++ SATL+ DP KL QL+L P LF + +Y
Sbjct: 391 ------LQKLLFSATLSADPEKLQQLNLFQPRLFAAVVKPVQDNNMKCDVEENDFIGKYA 444
Query: 303 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
P+ LE Y + C + KPL + L+ L + + + F S+E+T +L L+ + +
Sbjct: 445 TPDGLEQYMIHCTAGEKPLITLNLV--LNKTRVLCFAGSIETTRKLSMLIQMYAD 497
>gi|320032150|gb|EFW14105.1| ATP-dependent RNA helicase dbp6 [Coccidioides posadasii str.
Silveira]
Length = 795
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 192/387 (49%), Gaps = 86/387 (22%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP----CLDPRLKVALQNMGISSLFPVQV 56
E +++ S LP W+ PV VS P HLP L P+ LQ+ G S PVQ
Sbjct: 206 EHSQQPSYATLPEWLAHPVVVS-----PDTHLPFTELGLHPKQISTLQSQGYSKAMPVQS 260
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AV + D+C+++ TGSGKTLSY LP++ T+ V LR L+++PTR+L Q
Sbjct: 261 AVLPLALK-SEHRGDICVSAATGSGKTLSYVLPLISTIEPSPVSQLRGLIIVPTRELVKQ 319
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK----------------LEAGICY 160
++ A GL +G AVG +++ DE S L+ + + + +
Sbjct: 320 ARNTCELCAAGTGLRIGTAVGSTALKDEQSALMGQEQVYNFQAWKGKFSSVMTVSDWTNF 379
Query: 161 DPEDVLQELQS--------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
D ++ + E++ +DILV+TPGRL+DHI +T+GFTL+HL +LV+DE
Sbjct: 380 DLQEYVAEVKECRGALPNHFAKTSPNIDILVSTPGRLVDHIRSTKGFTLKHLKWLVIDEA 439
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL---KTIRRCGVERGFKDKP 263
D+LL E++Q W TVLQ E++ +D + +P SL +T+R
Sbjct: 440 DKLLNESFQEWSQTVLQAV----ESKGNDDAHPVPKDLCSLPKEQTVR------------ 483
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLF---------------LTTG--ETR---YKL 303
K++LSAT+T+D KL L L +P L TG TR Y+L
Sbjct: 484 -----KIILSATMTRDITKLNSLRLINPKLVEVRALDNSKGMLPSLLTGPPNTRVEGYQL 538
Query: 304 PERL-ESYKLICESKLKPLYLVALLQS 329
P L E + + + KPLYL+ L+ S
Sbjct: 539 PPTLNEMFVPVGDGSDKPLYLLELMAS 565
>gi|303323868|ref|XP_003071923.1| DEAD box ATP-dependent RNA helicase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111630|gb|EER29778.1| DEAD box ATP-dependent RNA helicase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 809
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 190/387 (49%), Gaps = 86/387 (22%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP----CLDPRLKVALQNMGISSLFPVQV 56
E +++ S LP W+ PV VS P HLP L P+ LQ+ G S PVQ
Sbjct: 220 EHSQQPSYATLPEWLAHPVVVS-----PDTHLPFTELGLHPKQISTLQSQGYSKAMPVQS 274
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AV + D+CI++ TGSGKTLSY LP++ T+ V LR L+++PTR+L Q
Sbjct: 275 AVLPLALK-SEHRGDICISAATGSGKTLSYVLPLISTIEPSPVSQLRGLIIVPTRELVKQ 333
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK----------------LEAGICY 160
++ A GL +G AVG +++ DE S L+ + + + +
Sbjct: 334 ARNTCELCAAGTGLRIGTAVGSTALKDEQSALMGQEQVYNFQAWKGKFSSVMTVSDWTNF 393
Query: 161 DPEDVLQELQS--------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
D ++ + E++ +DILV+TPGRL+DHI +T+GFTL+HL +LV+DE
Sbjct: 394 DLQEYVAEVKECRGALPNHFAKTSPNIDILVSTPGRLVDHIRSTKGFTLKHLKWLVIDEA 453
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL---KTIRRCGVERGFKDKP 263
D+LL E++Q W TVLQ E++ +D + +P SL +T+R
Sbjct: 454 DKLLNESFQEWSQTVLQAV----ESKGNDDAHPVPKDLCSLPKEQTVR------------ 497
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLF---------------LTTGETR-----YKL 303
K++LSAT+T+D KL L L +P L TG Y+L
Sbjct: 498 -----KIILSATMTRDITKLNSLRLINPKLVEVRALDNSKGMLPSLLTGPPNTWVEGYQL 552
Query: 304 PERL-ESYKLICESKLKPLYLVALLQS 329
P L E + + + KPLYL+ L+ S
Sbjct: 553 PPTLNEMFVPVGDGSDKPLYLLELMAS 579
>gi|302652935|ref|XP_003018306.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
gi|291181934|gb|EFE37661.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
Length = 812
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 171/342 (50%), Gaps = 78/342 (22%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LRAL+++PTR+L QV+D + GL +G AVG +++ DE +++ +E Y
Sbjct: 296 LRALIIVPTRELVKQVRDACELCSSGSGLRIGTAVGSTALKDEQAQI-----MEQISVYR 350
Query: 162 PE---------------------DVLQELQS--------------AVDILVATPGRLMDH 186
PE D + E + VD+L+ TPGRL+DH
Sbjct: 351 PESTRSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCIESSPCVDVLICTPGRLVDH 410
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
I +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+A GS
Sbjct: 411 IRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGS 460
Query: 247 LKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG---- 297
L+ + K YP +L K++LSAT+T+D KL L LH+P L + G
Sbjct: 461 LEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAEKD 512
Query: 298 ---------ETRYKLPERL-ESYKLICESKLKPLYLVALLQS 329
++ LP L ES + + KPLYL+ LLQS
Sbjct: 513 EAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
>gi|414876987|tpg|DAA54118.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 277
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 109/169 (64%), Gaps = 14/169 (8%)
Query: 35 LDP---RLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
+DP R ALQ MGI +L PVQ A W E IG G FER++CIN PTG+GKTL+Y LPI+
Sbjct: 103 VDPFQLRRAEALQRMGIEALCPVQEAAWLERIGLGTFERNICINFPTGAGKTLAYVLPIM 162
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q ALVVL TRDLA QVK+ F IAP V VGLAVG+SSIA+E+ L+++
Sbjct: 163 Q-----------ALVVLHTRDLAWQVKEAFDVIAPVVDFLVGLAVGKSSIAEEVFSLVRQ 211
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
K E D E V E Q+ + ILVA GRL DHIN T F+L+HL Y
Sbjct: 212 SKQELYSTIDEEYVQMEPQTKIKILVAISGRLRDHINMTNDFSLKHLHY 260
>gi|358378227|gb|EHK15909.1| hypothetical protein TRIVIDRAFT_174620, partial [Trichoderma virens
Gv29-8]
Length = 652
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 170/353 (48%), Gaps = 85/353 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-D 71
PW+ +P+ VS+ P L L P+ L+ G + F VQ A + ++ D
Sbjct: 72 PWLSAPIRVSVDTQTPFTELGIL-PKAARVLEQKGYTEAFAVQTAALPLLLPTNKQQQGD 130
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-- 129
L +++ TGSGKTL+YALPIV+ LSN V LRALVVLPTR+L Q ++VF A A
Sbjct: 131 LLVSAATGSGKTLAYALPIVRDLSNSVVTRLRALVVLPTRELVKQAQEVFELCAKAYEGE 190
Query: 130 ----LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ------------------ 167
+ VG+A+G S+A E L+ + YDPE Q
Sbjct: 191 DRKRVRVGIAIGNQSLASEQDLLVSKE-----TRYDPEAYKQLEQEASNGASSSNNEDDL 245
Query: 168 ------------------------ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+ S VDIL+ TPGRL++H++ T GF+L ++ +LVV
Sbjct: 246 DDLLSGPNTRRANPRIGPWQGQVIDFYSKVDILICTPGRLVEHLDQTPGFSLSYIRWLVV 305
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE D+LL +++Q WL VL+ F S FG+ R F D P
Sbjct: 306 DEADKLLAQSFQGWLDVVLE--------------KFKTSEFGA----------RDFPDMP 341
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGE----TRYKLPERLESY 310
Y + K++LSATLT+D + L QL L P + L +G+ T + LPE L Y
Sbjct: 342 YSGVRKILLSATLTRDLSLLNQLALRRPKLIVLESGKDVQVTEHSLPESLREY 394
>gi|295656812|ref|XP_002788992.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285824|gb|EEH41390.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 815
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 163/316 (51%), Gaps = 61/316 (19%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLF 68
W+ P D + L ++PRL L+ G FP+Q AV++ E PG
Sbjct: 210 WLTEPFDAPVSVQQNFSDL-GVNPRLVSILEKRGYIRAFPIQAAVFELLSKGENRHPG-- 266
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
DLCI++ TGSGKTL+YALP+V+ + A+ LR LV++PTR+L Q +D A
Sbjct: 267 --DLCISAATGSGKTLAYALPMVEGIEQSAIPKLRGLVIVPTRELVKQARDACELCATGT 324
Query: 129 GLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQELQSA 172
GL +G AVG +S+ +E + LIKR +L E ++ ++ + E +
Sbjct: 325 GLRIGTAVGTTSLKEEQALLIKRDQLYSPFASQTLSVQSMSSEDWAAFNVQEYIAEANVS 384
Query: 173 --------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
+DIL+ TPGRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W
Sbjct: 385 HTALPNHVTTSSPCIDILICTPGRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWT 444
Query: 219 PTV---LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
V L++ R + ++ S F + G C + R +L K++LSAT
Sbjct: 445 EVVFPALEMERIVSNSK----SGFFLNQLG-------CRIHRR-------QLQKIILSAT 486
Query: 276 LTQDPNKLAQLDLHHP 291
+T+D KL L L +P
Sbjct: 487 VTRDIPKLNSLRLRNP 502
>gi|327293469|ref|XP_003231431.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
gi|326466547|gb|EGD92000.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
Length = 812
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 171/342 (50%), Gaps = 78/342 (22%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L +
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPTRYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPIAK 295
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LRAL+++PTR+L QV+D + GL +G AVG +++ DE +++ +E Y
Sbjct: 296 LRALIIVPTRELVKQVRDACELCSSGSGLRIGTAVGSTALKDEQAQI-----MEQTSVYR 350
Query: 162 PE---------------------DVLQELQS--------------AVDILVATPGRLMDH 186
PE D + E + VDIL+ TPGRL+DH
Sbjct: 351 PESTRRQDDTTMTADEWASFSLVDYIAEAEEYSRTLPDHCIESSPCVDILICTPGRLVDH 410
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
I +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL +T P+A GS
Sbjct: 411 IRSTKGFTLDSLEWLVIDEADRLLNESFQEWVGTVLPALE----------TTEKPAAPGS 460
Query: 247 LKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHPLFL----TTG- 297
L+ + K +P +L K++LSAT+T+D +KL L LH+P + T G
Sbjct: 461 LQQL--------IKAFSFPVESRKLQKVILSATMTRDISKLNSLRLHNPKLVVVDGTEGD 512
Query: 298 ---------ETRYKLPERLESYKL-ICESKLKPLYLVALLQS 329
++ LP L + + + KPLYL+ LLQS
Sbjct: 513 EAGVGEAGPDSNIALPSLLNENSIPVGDGSEKPLYLLKLLQS 554
>gi|119185891|ref|XP_001243552.1| hypothetical protein CIMG_02993 [Coccidioides immitis RS]
gi|392870252|gb|EAS32044.2| ATP-dependent RNA helicase dbp6 [Coccidioides immitis RS]
Length = 809
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 186/387 (48%), Gaps = 86/387 (22%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP----CLDPRLKVALQNMGISSLFPVQV 56
E +++ S LP W+ PV VS P HLP L P+ LQ+ G S PVQ
Sbjct: 220 EHSQQPSYATLPEWLAHPVVVS-----PDTHLPFTELGLHPKQISTLQSQGYSKAMPVQS 274
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AV + D+C+++ TGSGKTLSY LP++ T+ V LR L+++PTR+L Q
Sbjct: 275 AVLPLALK-SEHRGDICVSAATGSGKTLSYVLPLISTIEPSPVSQLRGLIIVPTRELVKQ 333
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL---------------------- 154
++ A GL +G AVG +++ DE S L+ + ++
Sbjct: 334 ARNTCELCAAGTGLRIGTAVGSTALKDEQSALMGQEQVYNFQAWKGKFSSVMTGSDWTNF 393
Query: 155 -------EAGICYDP-EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
EA C + + +DILV+TPGRL+DHI +T+GFTL+HL +LV+DE
Sbjct: 394 DLQEYVAEAKECRGALPNHFAKTSPNIDILVSTPGRLVDHIRSTKGFTLKHLKWLVIDEA 453
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL---KTIRRCGVERGFKDKP 263
D+LL E++Q W TVLQ E++ +D + +P SL +TIR
Sbjct: 454 DKLLNESFQEWSQTVLQAV----ESKGNDDAHPVPKDLCSLPKEQTIR------------ 497
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPE--------RLESYKL 312
K++LSAT+T+D KL L L +P + ++ LP R E Y+L
Sbjct: 498 -----KIILSATMTRDITKLNSLRLINPKLVEVRALDNSKGMLPSLLTRPPNTRFEGYQL 552
Query: 313 ----------ICESKLKPLYLVALLQS 329
+ KPLYL+ L+ S
Sbjct: 553 PPTLNEMFVPAGDGSDKPLYLLELMAS 579
>gi|383850916|ref|XP_003701020.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Megachile rotundata]
Length = 679
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 182/380 (47%), Gaps = 70/380 (18%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVS--LFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVA 57
++ K++ VLP W+ +P +S L L+ L LD +L L+ GI+ LFPVQ +
Sbjct: 183 DKKKQEVKRVLPDWLANPNIISNDLNNGPSLESLNSVLDTKLIQILKTNGINKLFPVQAS 242
Query: 58 V--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ W E G + RD C+++PTGSGKTL+Y LPIV L +R V +R LVV+P +
Sbjct: 243 MISWLLKCNEDKQQGWWLRDTCVSAPTGSGKTLAYVLPIVHILQSRLVPKIRCLVVVPVQ 302
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA QV V A L+V L G SS E S +++ + E S
Sbjct: 303 ELAAQVYKVMVAYTSHTNLTVALLSGASSFQQEQSTILRT------------NARGESVS 350
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
AVDI+VATPGRL+DHI T F+L L +LV+DE DR+
Sbjct: 351 AVDIVVATPGRLIDHILKTPEFSLSDLRFLVIDEADRV---------------------- 388
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
+D +LP + + R K P + K++ SATL+QDP KL+ L L P
Sbjct: 389 --TDWIDYLPEPHNHTPRLTLSNM-RSSK----PPVQKLLFSATLSQDPKKLSHLRLFQP 441
Query: 292 LFLTT----------------GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLGE- 332
+ TT G RY PE L + C + KPL L LL
Sbjct: 442 VLFTTVLVTDNDNDVNLDTEAGNYIGRYTGPEGLTERAVECTMEYKPLALYDLLTRNNTI 501
Query: 333 EKCIVFTSSVESTHRLCTLL 352
K ++FT+S ES HRL LL
Sbjct: 502 IKTLIFTNSGESAHRLTILL 521
>gi|19075832|ref|NP_588332.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74662371|sp|Q76PD3.1|DBP6_SCHPO RecName: Full=ATP-dependent RNA helicase dbp6
gi|3581903|emb|CAA20842.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe]
Length = 604
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 180/378 (47%), Gaps = 61/378 (16%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K VLP W+ P+ V L + +L LQ I+ F VQ AV +
Sbjct: 104 KNITSVLPKWLAEPITVDPNTTVEFSSL-NISSKLVERLQKQNITRGFAVQAAVLPLLLQ 162
Query: 65 PGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
G + D+C+++ TGSGKTLSY +PIVQ LS+R V LR +V++PTR+L +QV
Sbjct: 163 DGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVA 222
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
F GL V GQ S+ E +L E + +D+LV+
Sbjct: 223 KTFEYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLVS 266
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFS 234
TPGRL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++
Sbjct: 267 TPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNIL 326
Query: 235 D-----ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
D + TFLP +L R P P L K+V SATLT+DP+K+A L LH
Sbjct: 327 DLDQNISPTFLPD-IDTLLPYRL----------PSP-LQKLVFSATLTRDPSKIASLKLH 374
Query: 290 HPLFLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
+P + GE + +P L+ Y + S+ KP+ L L+ S
Sbjct: 375 NPRLVLVQNKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTN 433
Query: 335 CIVFTSSVESTHRLCTLL 352
+ F S E+ RL LL
Sbjct: 434 ILCFVKSNEAAARLHRLL 451
>gi|350416892|ref|XP_003491155.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
impatiens]
Length = 615
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 181/382 (47%), Gaps = 80/382 (20%)
Query: 5 KKKSMPVLP-WMRSPVDVSL-FEDCPL--DHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K++ +LP W+ +P +S+ P D LD +L AL+ GI+ LFPVQ ++
Sbjct: 122 KREVKRILPEWLANPEVISIDLNSGPTLEDMNSILDSKLIEALRANGINKLFPVQASMVS 181
Query: 59 W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
W + + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVV P ++LA
Sbjct: 182 WLLKCDKDRQQNWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVPKVRCLVVAPVQELA 241
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
+Q+ V L VGL G S+ +E + K E+ E S VD
Sbjct: 242 MQIYKVMVTYTSHTNLRVGLLSGASAFHEEQRNIRK------------ENDRGEYISLVD 289
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I+VATPGRL+DHI T GF+L+ + +LV+DE D WL
Sbjct: 290 IVVATPGRLIDHILKTSGFSLDDIRFLVIDEAD-----TAADWLE--------------- 329
Query: 235 DASTFLPSAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+LP +L +R + K++ SATL+QDP KL +L L
Sbjct: 330 ----YLPEPHYQTPRLTLSNLRSSKIPAQ----------KLLFSATLSQDPEKLNRLGLF 375
Query: 290 HPLFLT----TGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLG 331
HP+ T TG+ RY PE L+ + CE++ KP+ L LL G
Sbjct: 376 HPILFTSVLVTGKDDDVNLDKEAVNFIGRYTSPEELKEEAIECEAEYKPVALYQLLIRDG 435
Query: 332 -EEKCIVFTSSVESTHRLCTLL 352
K +VFT+S + HRL LL
Sbjct: 436 ITSKALVFTNSGGTAHRLTILL 457
>gi|256075757|ref|XP_002574183.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 837
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 162/323 (50%), Gaps = 48/323 (14%)
Query: 2 EEAKKKS---MPVLP-WMRSP--VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ K K+ VLP W+ P L + ++ + + L++ L +GI+ FPVQ
Sbjct: 20 EKTKSKAHNVQEVLPFWITKPELFSSDLKQSLSVNEVAKIGEFLRLRLSEIGITHFFPVQ 79
Query: 56 VAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
AV + P RD+CI +PTGSGKTL+YA+PI+Q NR R +RAL++
Sbjct: 80 SAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNRVHRFIRALII 139
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
+P RDLA+QV F+ + + VG+ G S + E ++I +
Sbjct: 140 VPVRDLAVQVYKTFSQLVNGTDIQVGVLAGIKSFSKEQEDIINLTNESYSV--------- 190
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT----VLQ 223
VDI++ATPGRL+DH+ T GF++E L LV+DE DR++ E Q W T +
Sbjct: 191 ----KVDIVIATPGRLVDHLYNTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYY 246
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQ 278
T S N+N +S+ S S + I G Y R L K+++SATLT
Sbjct: 247 YTSSTNQNSWSNVSVRKRS-----RPIPTVGYH-------YDRSVDITLQKILVSATLTH 294
Query: 279 DPNKLAQLDLHHPLFLTTGETRY 301
DP L Q +L+ P+ T+ R+
Sbjct: 295 DPEPLKQFNLYFPILFTSNRIRH 317
>gi|71679691|gb|AAI00035.1| Ddx51 protein [Danio rerio]
Length = 386
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 26/211 (12%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPT 78
+ +P + P L LQ GI S FPVQ V E++G GL RD+C+++PT
Sbjct: 190 ISEVPGICPTLLRKLQTNGIQSFFPVQAEVIPAILESVGSGLLVGPGGYRPRDVCVSAPT 249
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKTL++ +P+VQ LS R VR +RAL VLPT++LA QV VF+A L V + GQ
Sbjct: 250 GSGKTLAFVIPVVQALSKRVVRQVRALAVLPTKELAQQVSKVFSAYTEGSSLKVVMITGQ 309
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S A E + L ++ G+ + S DI+VATPGRL+DHIN F+L+HL
Sbjct: 310 KSFAAEQTAL---SEIRGGVSH----------SLADIVVATPGRLVDHINKNSSFSLQHL 356
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
+L++DE DR++ +Q+WL Q+T++++
Sbjct: 357 RFLIIDEADRMIDSMHQSWLS---QVTKANH 384
>gi|353232410|emb|CCD79765.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 603
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 162/323 (50%), Gaps = 48/323 (14%)
Query: 2 EEAKKKS---MPVLP-WMRSP--VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ K K+ VLP W+ P L + ++ + + L++ L +GI+ FPVQ
Sbjct: 20 EKTKSKAHNVQEVLPFWITKPELFSSDLKQSLSVNEVAKIGEFLRLRLSEIGITHFFPVQ 79
Query: 56 VAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
AV + P RD+CI +PTGSGKTL+YA+PI+Q NR R +RAL++
Sbjct: 80 SAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNRVHRFIRALII 139
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
+P RDLA+QV F+ + + VG+ G S + E ++I +
Sbjct: 140 VPVRDLAVQVYKTFSQLVNGTDIQVGVLAGIKSFSKEQEDIINLTNESYSV--------- 190
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT----VLQ 223
VDI++ATPGRL+DH+ T GF++E L LV+DE DR++ E Q W T +
Sbjct: 191 ----KVDIVIATPGRLVDHLYNTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYY 246
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV-----KMVLSATLTQ 278
T S N+N +S+ S S + I G Y R V K+++SATLT
Sbjct: 247 YTSSTNQNSWSNVSVRKRS-----RPIPTVGYH-------YDRSVDITLQKILVSATLTH 294
Query: 279 DPNKLAQLDLHHPLFLTTGETRY 301
DP L Q +L+ P+ T+ R+
Sbjct: 295 DPEPLKQFNLYFPILFTSNRIRH 317
>gi|326475893|gb|EGD99902.1| ATP-dependent RNA helicase DBP6 [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 172/334 (51%), Gaps = 62/334 (18%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RP---K 153
LRAL+++PTR+L QV+D + GL +G AVG +++ DE +++++ RP +
Sbjct: 296 LRALIIVPTRELVKQVRDACELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPESTR 355
Query: 154 LEAGICYDPE--------DVLQELQS--------------AVDILVATPGRLMDHINATR 191
+ G + D + E + VD+L+ TPGRL+DHI +T+
Sbjct: 356 SQNGTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPCVDVLICTPGRLVDHIRSTK 415
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
GFTL L +LV+DE DRLL E++Q W+ TVL + + P+A GSL+ +
Sbjct: 416 GFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGSLEELI 465
Query: 252 RCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYK------- 302
+ F R L K++LSAT+T+D KL L LH+P L + G R +
Sbjct: 466 KA-----FNHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAERDEAEAGEAE 520
Query: 303 ------LPERL-ESYKLICESKLKPLYLVALLQS 329
LP L ES + + KPLYL+ LLQS
Sbjct: 521 PDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
>gi|326483004|gb|EGE07014.1| ATP-dependent RNA helicase dbp6 [Trichophyton equinum CBS 127.97]
Length = 812
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 172/334 (51%), Gaps = 62/334 (18%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RP---K 153
LRAL+++PTR+L QV+D + GL +G AVG +++ DE +++++ RP +
Sbjct: 296 LRALIIVPTRELVKQVRDACELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPESTR 355
Query: 154 LEAGICYDPE--------DVLQELQS--------------AVDILVATPGRLMDHINATR 191
+ G + D + E + VD+L+ TPGRL+DHI +T+
Sbjct: 356 SQNGTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPCVDVLICTPGRLVDHIRSTK 415
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
GFTL L +LV+DE DRLL E++Q W+ TVL + + P+A GSL+ +
Sbjct: 416 GFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGSLEELI 465
Query: 252 RCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYK------- 302
+ F R L K++LSAT+T+D KL L LH+P L + G R +
Sbjct: 466 KA-----FSHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAERDEAEAGEAE 520
Query: 303 ------LPERL-ESYKLICESKLKPLYLVALLQS 329
LP L ES + + KPLYL+ LLQS
Sbjct: 521 PDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
>gi|121700629|ref|XP_001268579.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
gi|119396722|gb|EAW07153.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
Length = 848
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 183/383 (47%), Gaps = 75/383 (19%)
Query: 1 MEEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+EEA+K S LP W+ +P+ S + L +D L L G F VQ V
Sbjct: 224 LEEAEKPSYSSLPEWLANPLRESSDKRAQFSEL-GIDSNLLRVLDQNGYKEAFAVQSTVI 282
Query: 60 QETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
+ G DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q +
Sbjct: 283 PLLLQGSKRHAGDLCISAATGSGKTLSYVLPLVTALEPTPAPRMRGLIVVPTRELVKQAR 342
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE--------------- 163
+ A GL VG AVG +I DE L++ + CY PE
Sbjct: 343 EACELCAAGSGLRVGSAVGNVAIKDEQRTLMRIDQ-----CYGPEISKQRQTVDLTGEDW 397
Query: 164 --------------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+Q+ + VDIL+ TPGRL+DH+ T+GFTLEHL +LV+
Sbjct: 398 TKFNLLDYIAEAGDLSESLPGYIQKAEPNVDILICTPGRLVDHLRYTKGFTLEHLEWLVI 457
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDK 262
DE DRLL E++Q W+ V+ S + P AFGS + + G+ K+
Sbjct: 458 DEADRLLNESFQEWVDVVMN----------SLDARKSPKAFGSSGQFMAELGLPIQVKE- 506
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---------------TTGETRYKLPERL 307
PR K++LSAT+T+D +KL L L +P + + ++ +P L
Sbjct: 507 --PR--KVILSATMTRDVSKLNSLRLANPKLVIVSSADPTSTEDGGHVKSDEQFTIPRTL 562
Query: 308 ESYKL-ICESKLKPLYLVALLQS 329
+ Y + + + KPLYL++LL+S
Sbjct: 563 KEYSVSVGDGSQKPLYLLSLLRS 585
>gi|380018891|ref|XP_003693352.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
Dbp73D-like [Apis florea]
Length = 577
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 187/389 (48%), Gaps = 85/389 (21%)
Query: 2 EEAKKKSMPV---LP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPV 54
E+++ KS V LP W+ +P + V L L+ L LD +L L+ GI+ LFPV
Sbjct: 78 EKSRHKSHEVKRILPEWLTNPRIISVDLDSGPSLEELNSILDLKLIEVLRTNGINKLFPV 137
Query: 55 QVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
Q ++ W E + RD C+++PTGSGKTL+Y LPI+Q L +R V +R LVV+
Sbjct: 138 QASMISWLLKCNEDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVPKVRCLVVV 197
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
P ++LA QV VF L VGL G S +E ++K E E
Sbjct: 198 PVQELATQVYKVFVTYTSHTXLKVGLLSGASIFHEEQKNILK------------ESARGE 245
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
S VDI++ATPGRL+DHI T GF+L +L +LV+DE D+ WL
Sbjct: 246 YISIVDIIIATPGRLIDHILKTPGFSLNNLQFLVIDEADKA-----ADWLE--------- 291
Query: 229 NENRFSDASTFLPSAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 283
+LP +L +R C V K++ SATL+QDP KL
Sbjct: 292 ----------YLPDPHYRRPRLTLFNLRSCEVPAQ----------KLLFSATLSQDPEKL 331
Query: 284 AQLDLHHPLFLTT----------------GE--TRYKLPERLESYKLICESKLKP--LYL 323
+L L P+ T+ G+ RY P+ L+ + C ++ KP LY
Sbjct: 332 NRLGLFQPILFTSVLVKDKDDDVNLDKXIGDFIGRYTSPKELKEQAIECATEYKPAALYH 391
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ + + K ++FT+S E+THRL LL
Sbjct: 392 IIINNDIT-PKTLIFTNSGETTHRLTILL 419
>gi|307168298|gb|EFN61504.1| Probable ATP-dependent RNA helicase Dbp73D [Camponotus floridanus]
Length = 581
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 178/396 (44%), Gaps = 73/396 (18%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P + L L L LD +L L+ GI LFPVQ V W
Sbjct: 172 VLPDWLAHPEIISADLNSGPSLQELDSILDAKLIKVLKANGIVKLFPVQSNVIKWLHKCN 231
Query: 65 P----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
G + RD C+++PTGSGKTL+Y LPI+Q L R V +R L+VLP ++LA QV V
Sbjct: 232 MDRKLGRWPRDTCVSAPTGSGKTLAYVLPIIQELQTRLVPKIRCLIVLPVQELAAQVHRV 291
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
L VGL G S E + +IK K E G Y S VDI++ATP
Sbjct: 292 MLTYTSHTNLKVGLLSGAFSFEQEQNSIIK--KTERGKYY----------STVDIIIATP 339
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DHI T GF+ + L +LV+DE DR W+ +L
Sbjct: 340 GRLVDHILKTPGFSFDSLKFLVIDEADRAAE-----WM-------------------QYL 375
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET- 299
P S I G K P K++ SATL+QDP KL+ L L P+ TT T
Sbjct: 376 PEPH-SRAPILTLGNIHSSKITPAQ---KLLFSATLSQDPEKLSWLGLFQPILFTTVVTD 431
Query: 300 ----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSV 342
RY P L + C + KP+ L LL K +VFT+S
Sbjct: 432 KDTDVNLDKIAGDFIGRYTSPGELTELAMECNVEYKPVALYQLLTRHDTISKTLVFTNSG 491
Query: 343 ESTHRLCTLLNHFGELR-IKIKEYSGL----QRQSV 373
+THRL L+ R + + E S QR+SV
Sbjct: 492 HTTHRLALLMQSLLSKRNVAVGELSAQLAPKQRESV 527
>gi|312376445|gb|EFR23526.1| hypothetical protein AND_12724 [Anopheles darlingi]
Length = 749
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 187/400 (46%), Gaps = 64/400 (16%)
Query: 13 PWMRSPV--DVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGP 65
PW+ P+ D L P + LD LK L+ MG LFPVQ V W + P
Sbjct: 130 PWLSHPIIIDSDLSAQGPSIKKQAYLDGVLKDNLKAMGYKRLFPVQEKVIPWILEAHAKP 189
Query: 66 GLF-ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
F RD+CI+SPTGSGKTL++A+PIVQ L R +RALV+LP ++LA QV VF +
Sbjct: 190 APFWPRDVCISSPTGSGKTLAFAVPIVQLLLKRVAPAVRALVILPVQELAEQVYGVFEKL 249
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
++ + + S E +A + Y Q +Q A DI+V T GRL+
Sbjct: 250 CQGTKITPLVLSRKQSFHQE----------QAKLVYTLHG--QFIQKA-DIVVTTAGRLV 296
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
+H+++T GFTL HL +LV+DE DR++ + WL + + + ++ L
Sbjct: 297 EHLHSTAGFTLCHLRFLVIDEADRVMNQIQNDWLYHLNKHVKQQSD------EYLLGRTA 350
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT--------- 295
G L D+P + K++ SATL++DP KL L HP T
Sbjct: 351 GQLSQTE-------LFDRPQ-QPHKLLFSATLSRDPEKLQTFKLFHPKLFTAVRDPTERA 402
Query: 296 -------TGETR-------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
G T+ Y P L + ++KPL L AL++ G K
Sbjct: 403 IALSKSGAGSTKQNALLRRGKFIGQYTTPSELRELVCYTQFRIKPLTLFALIRQAGYRKF 462
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
+VFT+ ++ +HRL +L + I+E+S + RR
Sbjct: 463 LVFTNGIDGSHRLSFVLQRLFGTEMVIEEWSSSLTPATRR 502
>gi|226295059|gb|EEH50479.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides brasiliensis
Pb18]
Length = 852
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 155/292 (53%), Gaps = 54/292 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALP 89
++PRL L+ G+ FP+Q AV + E PG DLCI++ TGSGKTL+Y LP
Sbjct: 266 VNPRLVSILEKRGLIRPFPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYTLP 321
Query: 90 IVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
+V+ + A+ LR LV++PTR+L Q +D + GL +G AVG +S+ +E + LI
Sbjct: 322 MVEGIEQSAIPQLRGLVIVPTRELVKQARDACELCSSGTGLRIGTAVGTTSLKEEQALLI 381
Query: 150 KRPKL----------------EAGICYDPEDVLQELQSA--------------VDILVAT 179
K +L E ++ ++ + E + +DIL++T
Sbjct: 382 KLDQLYSPFSSQTLSEQSMSSEDWAAFNLQEYIAEANVSHKALPNHVTTSSPCIDILIST 441
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W+ VL + + S + F
Sbjct: 442 PGRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEMERIDSNSKSGIF 501
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
L + G C V R +L K++LSAT+T+D KL L L +P
Sbjct: 502 L-NQLG-------CQVRRR-------QLQKIILSATMTRDIPKLISLRLRNP 538
>gi|340711741|ref|XP_003394428.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
terrestris]
Length = 659
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 181/382 (47%), Gaps = 80/382 (20%)
Query: 5 KKKSMPVLP-WMRSPVDVSL-FEDCPL--DHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K++ +LP W+ +P +S+ P D LD +L AL+ GI+ LFPVQ ++
Sbjct: 166 KREVKRILPEWLANPEVISIDLNSGPTLEDMNSILDSKLIEALRANGINKLFPVQASMVS 225
Query: 59 W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
W + + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVV P ++LA
Sbjct: 226 WLLKCNKERQQKWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVPKVRCLVVAPVQELA 285
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
+Q+ V L VGL G S+ +E + K E+ E S VD
Sbjct: 286 MQIYKVMVTYTSHTNLRVGLLSGASAFHEEQRNIRK------------ENDRGEYISLVD 333
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I+VATPGRL+DHI T GF+L+ + +LV+DE D WL
Sbjct: 334 IVVATPGRLIDHILKTSGFSLDDIRFLVIDEAD-----TAADWLE--------------- 373
Query: 235 DASTFLPSAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+LP +L +R + P K++ SATL+QDP KL +L L
Sbjct: 374 ----YLPEPHYQTPRLTLSNLRSSKI-------PAQ---KLLFSATLSQDPEKLNRLGLF 419
Query: 290 HPLFLTT----------------GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
HP+ T+ G RY PE L+ + CE++ KP+ L L+ G
Sbjct: 420 HPILFTSVLVTDKDDDVNLDKEVGNFIGRYTSPEELKEEAIECEAEYKPVALYQLIIRNG 479
Query: 332 -EEKCIVFTSSVESTHRLCTLL 352
K +VFT+S + HRL LL
Sbjct: 480 ITSKVLVFTNSGGTAHRLTILL 501
>gi|328790575|ref|XP_001122539.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Apis mellifera]
Length = 600
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 184/392 (46%), Gaps = 82/392 (20%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--W----Q 60
+LP W+ +P + V L L+ L LD +L L+ GI+ LFPVQ ++ W
Sbjct: 114 ILPEWLTNPRIISVDLDSGPSLEELHSILDLKLIEVLRTNGINKLFPVQASMISWLLKCN 173
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E + RD C+++PTGSGKTL+Y LPI+Q L +R V +R LVV+P ++LA QV V
Sbjct: 174 EDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVPKVRCLVVVPVQELATQVYKV 233
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F L VGL G S +E ++K E E S VDI++ATP
Sbjct: 234 FVTYTSHTNLKVGLLSGASIFHEEQKNILK------------ESARGEYISIVDIIIATP 281
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DHI T GF+L L +LV+DE D+ WL +L
Sbjct: 282 GRLIDHILKTPGFSLNDLQFLVIDEADKA-----ADWLE-------------------YL 317
Query: 241 PSAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
P +L + C + K++ SATL+QDP KL +L L P+ T
Sbjct: 318 PDPHYRRPRLTLLNLHSCEIPAQ----------KLLFSATLSQDPEKLNRLGLFQPILFT 367
Query: 296 TGET-----------------RYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCI 336
+ T RY P+ L+ + C ++ KP LY + + + K +
Sbjct: 368 SVLTDKDDDVNLDKEVGDFIGRYTSPKELKEQAIECATEYKPAALYHIIINNDII-PKTL 426
Query: 337 VFTSSVESTHRLCTLLNHF-GELRIKIKEYSG 367
+FT+S ++THRL LL F E I + E S
Sbjct: 427 IFTNSGKTTHRLTILLQSFLSEKNIIVGELSA 458
>gi|225681311|gb|EEH19595.1| ATP-dependent RNA helicase DBP6 [Paracoccidioides brasiliensis
Pb03]
Length = 836
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 155/292 (53%), Gaps = 54/292 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALP 89
++PRL L+ G FP+Q AV + E PG DLCI++ TGSGKTL+YALP
Sbjct: 272 VNPRLVSILEKRGFIRPFPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYALP 327
Query: 90 IVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
+V+ + A+ LR LV++PTR+L Q +D + GL +G AVG +S+ +E + LI
Sbjct: 328 MVEGIEQSAIPKLRGLVIVPTRELVKQARDACELCSSGTGLRIGTAVGTTSLKEEQALLI 387
Query: 150 KRPKL----------------EAGICYDPEDVLQELQSA--------------VDILVAT 179
K +L E ++ ++ + E + +DIL++T
Sbjct: 388 KLDQLYSPFSSQTLSEQSMSSEDWAAFNLQEYIAEANVSHKALPNHVTTSSPCIDILIST 447
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W+ VL + + S + F
Sbjct: 448 PGRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEMERIDSNSKSGIF 507
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
L + G + RR +L K++LSAT+T+D KL L L +P
Sbjct: 508 L-NQLG-FQIHRR-------------QLQKIILSATMTRDIPKLISLRLRNP 544
>gi|225561306|gb|EEH09586.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus G186AR]
Length = 843
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 165/321 (51%), Gaps = 53/321 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTL+YALP+V + + LR LVV+PTR+L Q ++ A GL
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEQSSYPRLRGLVVVPTRELVWQAREACELCATGTGLR 345
Query: 132 VGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQELQS---- 171
+G AVG +S+ +E + LIK +L ++ ++ ++ + E +S
Sbjct: 346 IGTAVGTASLNEEQASLIKHEQLYSPCTDQIKNIQQMSADSWTSFNIQEYISEAESSPSA 405
Query: 172 ----------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V
Sbjct: 406 FPNHVAIPSPSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVV 465
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQD 279
+ + NR + GV E G+K PRL K++LSAT+T+D
Sbjct: 466 IPAL---DRNRID-------------VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRD 508
Query: 280 PNKLAQLDLHHPLFLTTGETR 300
+KL L L +P + + + R
Sbjct: 509 ISKLQALRLRNPKLVVSDDPR 529
>gi|332018269|gb|EGI58874.1| Putative ATP-dependent RNA helicase Dbp73D [Acromyrmex echinatior]
Length = 761
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 171/365 (46%), Gaps = 69/365 (18%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P + L PL+ L LD +L L+ GI LFPVQ + W
Sbjct: 274 VLPDWLAHPEIISADLNSGPPLEELESVLDAKLIEVLRANGIIKLFPVQSNIIKWLHKCN 333
Query: 65 P----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
G + +D C+++PTGSGKTL+Y LPIVQ L R V +R LVVLP ++LA Q+ V
Sbjct: 334 MHRKIGWWPKDTCVSAPTGSGKTLAYVLPIVQELQTRFVPKIRCLVVLPVQELAAQIHKV 393
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
L VGL G SS E + +IK K E G + S VDI++ATP
Sbjct: 394 MVTYTSHTDLKVGLLSGASSFKQEQNSIIK--KTERG----------QYLSRVDIIIATP 441
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DHI T GF+L++L +LV+DE DR WL + + +
Sbjct: 442 GRLLDHILKTPGFSLDYLRFLVIDEADRATE-----WLQYLPEF------------HSRP 484
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET- 299
P G++++ + + K++ SATL+QDP KL++L L P TT T
Sbjct: 485 PLTLGNMRSSKVIPAQ------------KLLFSATLSQDPEKLSRLGLFQPKLFTTVVTD 532
Query: 300 ----------------RYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIVFTSSV 342
RY P L + C KP+ L LL K +VFT+S
Sbjct: 533 KDIDINLDKVAGDFIGRYTSPGELTELAVECPPSYKPIVLYQLLTKHDIIPKTLVFTNSG 592
Query: 343 ESTHR 347
+ HR
Sbjct: 593 QHAHR 597
>gi|261191654|ref|XP_002622235.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
gi|239590001|gb|EEQ72644.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
Length = 847
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 156/294 (53%), Gaps = 48/294 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + LR LVV+PTR+L Q +D A GL +G AVG +S+ +E + LIK
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDACELCATRTGLRIGTAVGTASLKEEQALLIKHD 385
Query: 153 KL----------------EAGICYDPEDVLQELQSA--------------VDILVATPGR 182
+L E+ ++ ++ + E++ + +DIL+ TPGR
Sbjct: 386 QLYSPSNRRIGNGHQMIAESWASFNFQEYITEVERSHSAFPDHVTTPSPNIDILICTPGR 445
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
L+DHI +T+GF+LEHL +LV+DE DRLL E++Q W+ V+ + + LP
Sbjct: 446 LVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPD 505
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
+ C PRL K++LSAT+T+D KL L L +P ++T
Sbjct: 506 LGWQI-----C----------KPRLRKIILSATMTRDIAKLNSLRLQNPKLVST 544
>gi|159131798|gb|EDP56911.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus A1163]
Length = 856
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 187/386 (48%), Gaps = 79/386 (20%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K + LP W+ +PV + L L+V L++ G F VQ
Sbjct: 225 EETEKPNYSSLPAWLANPVREPASKRARFSELGINSNLLRV-LEDHGYKEAFAVQ----- 278
Query: 61 ETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
T+ P L + DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 279 STVIPLLLQGLRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELV 338
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RPKL--------------- 154
Q ++ A GL +G AVG +I DE L++ P+L
Sbjct: 339 KQAREACELCATGSGLRIGSAVGNVAIKDEQRTLMRVDQCYGPELSKQRQTVDLTGEDWT 398
Query: 155 ---------EAGICYDP-EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
EAG +P +Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+D
Sbjct: 399 NFSLMNYLAEAGELSEPLPGYVQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLQWLVID 458
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKP 263
E DRLL E++Q W+ V++ S + P FGS K + G+ ++
Sbjct: 459 EADRLLNESFQEWVDVVMK----------SLDARKAPKTFGSSGKFMAELGLPIQSRE-- 506
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-------------------TTGETRYKLP 304
PR K++LSAT+T+D +KL L L +P + TT + ++ LP
Sbjct: 507 -PR--KVILSATMTRDISKLNSLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLP 563
Query: 305 ERLESYKL-ICESKLKPLYLVALLQS 329
L+ Y + + + KPLYL+ LLQS
Sbjct: 564 STLKEYSVSVGDGSQKPLYLLQLLQS 589
>gi|440632967|gb|ELR02886.1| hypothetical protein GMDG_01108 [Geomyces destructans 20631-21]
Length = 870
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 180/372 (48%), Gaps = 85/372 (22%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERDL 72
W+ SP+ V+ + L L + +L+ GI S F VQ AV + GP D+
Sbjct: 266 WLGSPISVAPTATAQFEDL-GLPSAVIESLKKSGIPSAFAVQAAVLSLLLPGPQKQPGDV 324
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG--- 129
+++ TGSGKTL+Y LP+V+ +S V LR L+V+PTR+L Q ++V A A G
Sbjct: 325 LVSAATGSGKTLAYVLPMVEDISQTMVTQLRGLIVMPTRELVTQAREVSDMCANAYGTGS 384
Query: 130 ---LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE----------------------- 163
++VG+A+G ++ E S L+K+ YDP+
Sbjct: 385 RRHINVGVAIGNQTLRQEQSSLMKQ-----DFVYDPKEYRARQERINAAWSGSSVGDEVA 439
Query: 164 ------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
D + + VDI++ TPGRL++H+ +T GFTLEHL +LV+DE D+LL
Sbjct: 440 NLLMEEDISTPIDHIVQYSPKVDIMICTPGRLVEHLKSTPGFTLEHLKWLVIDEADKLLD 499
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+++Q WL TV+ + T PS S KD R+ K+V
Sbjct: 500 QSFQQWLETVMA--------SLTSRETAAPSQLRS-------------KD----RITKVV 534
Query: 272 LSATLTQDPNKLAQLDLHHPLF--------LTTGETRY---KLPERL-ESYKLICESKLK 319
LSAT+T+D L+QL L+ P F + GE + LP L ES I + LK
Sbjct: 535 LSATMTRDIGLLSQLKLNKPKFVVLEGNEGMGAGEGQVDTLNLPHTLHESAIKIDQEGLK 594
Query: 320 PLYLVALLQSLG 331
PLYL+ +L+ G
Sbjct: 595 PLYLLEVLKRNG 606
>gi|70996614|ref|XP_753062.1| DEAD/DEAH box helicase [Aspergillus fumigatus Af293]
gi|66850697|gb|EAL91024.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus Af293]
Length = 856
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 186/386 (48%), Gaps = 79/386 (20%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K + LP W+ +PV + L L+V L++ G F VQ
Sbjct: 225 EETEKPNYSSLPAWLANPVREPASKRARFSELGINSNLLRV-LEDHGYKEAFAVQ----- 278
Query: 61 ETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
T+ P L + DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 279 STVIPLLLQGLRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELV 338
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RPKL--------------- 154
Q ++ A GL +G AVG +I DE L++ P+L
Sbjct: 339 KQAREACELCATGSGLRIGSAVGNVAIKDEQRTLMRVDQCYGPELSKQRQTVDLTGEDWT 398
Query: 155 ---------EAGICYDP-EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
EAG +P +Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+D
Sbjct: 399 NFSLMNYLAEAGELSEPLPGYVQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLQWLVID 458
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKP 263
E DRLL E++Q W+ V+ S + P FGS K + G+ ++
Sbjct: 459 EADRLLNESFQEWVDVVMN----------SLDARKAPKTFGSSGKFMAELGLPIQSRE-- 506
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-------------------TTGETRYKLP 304
PR K++LSAT+T+D +KL L L +P + TT + ++ LP
Sbjct: 507 -PR--KVILSATMTRDISKLNSLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLP 563
Query: 305 ERLESYKL-ICESKLKPLYLVALLQS 329
L+ Y + + + KPLYL+ LLQS
Sbjct: 564 STLKEYSVSVGDGSQKPLYLLQLLQS 589
>gi|67516711|ref|XP_658241.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|40746024|gb|EAA65180.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|259489096|tpe|CBF89085.1| TPA: DEAD/DEAH box helicase, putative (AFU_orthologue;
AFUA_1G16940) [Aspergillus nidulans FGSC A4]
Length = 853
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 176/377 (46%), Gaps = 78/377 (20%)
Query: 1 MEEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+EEA+K + LP W+ +PV S L ++P+L L+ G F VQ AV
Sbjct: 224 VEEAEKPTYSSLPPWLANPVRASAETRAKFSDL-GIEPKLLRVLEVNGYKEAFAVQAAVI 282
Query: 60 QETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
+ GP D+C+++ TGSGKTLSY LP+V L LR L+V+PTR+L Q +
Sbjct: 283 PLLLKGPNNHTGDICVSAATGSGKTLSYVLPLVTELEQIPAPRLRGLIVVPTRELVKQAR 342
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV------------- 165
+ GL VG AVG +I DE L+ ++E Y PE V
Sbjct: 343 EACEFCTAGTGLRVGSAVGNVAIKDEQRSLM---RIEH--VYSPESVESRRKAELTGEEW 397
Query: 166 ----LQELQS------------------AVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
LQ+ S VDIL+ TPGRL+DHI T+GFTL+HL +LV+
Sbjct: 398 ADFSLQDYISNTTDLGETLPGYIHRGEPNVDILICTPGRLVDHIRYTKGFTLKHLQWLVI 457
Query: 204 DETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
DE DRLL E++Q W+ V+Q L F + FL SL+T
Sbjct: 458 DEADRLLNESFQEWVDVVMQSLDARKAYGAFGPSGRFLADLGMSLQTKE----------- 506
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------------------ETRYKLP 304
PR K+VLSAT+T+D +KL L L +P + G + R+ LP
Sbjct: 507 --PR--KVVLSATMTKDVSKLNSLRLTNPRLVVVGGSDQTTTADDESGVVVHADERFTLP 562
Query: 305 ERLESYKL-ICESKLKP 320
L Y + + + + KP
Sbjct: 563 TTLREYSIAVGDGEHKP 579
>gi|154282339|ref|XP_001541965.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410145|gb|EDN05533.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 826
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 53/321 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q ++ A GL
Sbjct: 286 LCISATTGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREACELCATGTGLR 345
Query: 132 VGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQELQS---- 171
+G AVG +S+ +E + LIK + +A ++ ++ + E ++
Sbjct: 346 IGTAVGTASLNEEQASLIKHEQFYSPRTDQIKNIQQMSADAWTSFNIQEYISEAENSPSA 405
Query: 172 ----------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V
Sbjct: 406 FPNHVAIPSPSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVV 465
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQD 279
+ + NR + GV E G+K PRL K++LSAT+T+D
Sbjct: 466 IPAL---DRNRID-------------VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRD 508
Query: 280 PNKLAQLDLHHPLFLTTGETR 300
+KL L L +P + + + R
Sbjct: 509 ISKLQALRLRNPKLVVSDDPR 529
>gi|158286571|ref|XP_308815.4| AGAP006941-PA [Anopheles gambiae str. PEST]
gi|157020531|gb|EAA04138.4| AGAP006941-PA [Anopheles gambiae str. PEST]
Length = 655
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 65/390 (16%)
Query: 13 PWMRSP--VDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W----QETI 63
PW+ P + L P + LD R+K L++MG LFPVQ V W +
Sbjct: 148 PWLSHPTIIQHDLSAKGPSIKQQSYLDDRIKANLKSMGFKRLFPVQEKVIPWILEAHQKP 207
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + RD+CI+SPTGSGKTL++A+P+VQ L R +RALV+LP ++LA QV VF
Sbjct: 208 AP-FWPRDVCISSPTGSGKTLAFAVPVVQLLLKRVAPAIRALVILPVQELAEQVFQVFRQ 266
Query: 124 IAPAVGLS-VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 182
+ + V L+ G + E +L+K E Y P+ VDI+V T GR
Sbjct: 267 LCDGTNIHPVVLSRGM-QLEVEQQKLVKYCNGE----YMPK---------VDIVVTTAGR 312
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
L++H+++T+GFTL HL +L+VDE D+++ + WL + + + +++ + L S
Sbjct: 313 LIEHLHSTKGFTLRHLRFLIVDEADKVMNQIQNDWLYHLNKHVKHESDEYLLGRTADLLS 372
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT------- 295
R +P+ K++ SAT +D KL L L HP T
Sbjct: 373 QSELFDRAR----------QPH----KLLFSATFKRDAEKLKTLKLFHPKLFTAVIDPQE 418
Query: 296 -------TGET------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T T +Y P L+ + E + KPL L L++ G K +
Sbjct: 419 RTMMAQSTATTQAAEPRRGNFAGQYTTPAELKECICLTEQRSKPLTLYGLIRENGYRKFL 478
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
VFT+ + ++HRL +L + I+E+S
Sbjct: 479 VFTNGINTSHRLSFVLQRLFGTDMVIEEWS 508
>gi|310796139|gb|EFQ31600.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 873
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 187/376 (49%), Gaps = 84/376 (22%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K S LP W+ +P+ V+ P + ++P+ AL++ G F VQ A + +
Sbjct: 269 KPSYETLPHWLAAPIRVAPDTRTPFADI-GINPKAARALESKGFRDAFAVQTAAFPLLL- 326
Query: 65 PGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFA 122
P R DL I + TGSGKTL+YALP+V+ +S AV LRALVVLPTR+L Q ++VF
Sbjct: 327 PSCKHRQGDLLIAAATGSGKTLAYALPVVRDISQGAVTRLRALVVLPTRELVKQAQEVFE 386
Query: 123 AIAPAVG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE------------- 163
A A + +G+++G + E + L++R + YDPE
Sbjct: 387 LCAGAFDGRDQKRVRIGISIGSQQLRHEQAALVEREER-----YDPEAYRAARSRELEAW 441
Query: 164 ----------------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
D + + S VD+L+ TPGRL++HIN T GF+L+H+ +L
Sbjct: 442 MDVEEPATPAGSKDAAAAGSLPDHVVDYTSKVDVLICTPGRLVEHINLTPGFSLDHVRWL 501
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
VVDE D+LL +++Q WL V+ R+ N+FS A F S G GV R
Sbjct: 502 VVDEADKLLAQSFQGWLDVVMPKLRT---NKFS-ARDFPDSNLG--------GVVR---- 545
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE--------TRYKLPERL-ESYK 311
K+VLSATLT+D + L+ L L P L + G + LP L ES
Sbjct: 546 -------KIVLSATLTRDLSLLSGLHLRRPQLIVLEGSQADGSAPIAEHTLPTLLKESAI 598
Query: 312 LICESKLKPLYLVALL 327
+ ++ LKPLYL+ LL
Sbjct: 599 RVHDANLKPLYLIDLL 614
>gi|240274402|gb|EER37918.1| ATP-dependent RNA helicase dbp6 [Ajellomyces capsulatus H143]
Length = 826
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 165/321 (51%), Gaps = 53/321 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q ++ A GL
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREACELCATGRGLR 345
Query: 132 VGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQELQ----- 170
+G AVG +S+ +E + LIK + +A ++ ++ + E +
Sbjct: 346 IGTAVGTASLNEEQASLIKHEQFYSPSIDQIKNIQQMSADAWTSFNIQEYISEAESSHSA 405
Query: 171 ---------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
S+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V
Sbjct: 406 FPNHVAIPSSSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVV 465
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQD 279
+ + NR + GV E G+K PRL K++LSAT+T+D
Sbjct: 466 IPAL---DRNRID-------------VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRD 508
Query: 280 PNKLAQLDLHHPLFLTTGETR 300
+KL L L +P + + + R
Sbjct: 509 ISKLQVLRLRNPKLVVSDDPR 529
>gi|325090745|gb|EGC44055.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus H88]
Length = 826
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 165/321 (51%), Gaps = 53/321 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q ++ A GL
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREACELCATGRGLR 345
Query: 132 VGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQELQ----- 170
+G AVG +S+ +E + LIK + +A ++ ++ + E +
Sbjct: 346 IGTAVGTASLNEEQASLIKHEQFYSPSIDQIKNIQQMSADAWTSFNIQEYISEAESSHSA 405
Query: 171 ---------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
S+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V
Sbjct: 406 FPNHVAIPSSSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVV 465
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQD 279
+ + NR + GV E G+K PRL K++LSAT+T+D
Sbjct: 466 IPAL---DRNRID-------------VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRD 508
Query: 280 PNKLAQLDLHHPLFLTTGETR 300
+KL L L +P + + + R
Sbjct: 509 ISKLQVLRLRNPKLVVSDDPR 529
>gi|1749726|dbj|BAA13920.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 490
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 166/340 (48%), Gaps = 59/340 (17%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGL------FERDLCINSPTGSGKTLSYALPIVQTLSN 96
LQ I+ F VQ AV + G + D+C+++ TGSGKTLSY +PIVQ LS+
Sbjct: 27 LQKQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSH 86
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
R V LR +V++PTR+L +QV F GL V GQ S+ E +L
Sbjct: 87 RTVPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNG------ 140
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
E + +D+LV+TPGRL+DHI F+L+HL Y+V+DE DRLL +++Q
Sbjct: 141 ----------DENECRIDVLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQD 190
Query: 217 WLPTVLQLTRS----DNENRFSD-----ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 267
W+ TV+ N++ D + TFLP +L R P P L
Sbjct: 191 WVDTVMMEISHPKCLQNKSNILDLDQNISPTFLPD-IDTLLPYRL----------PSP-L 238
Query: 268 VKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETR-----YKLPERLESYKL 312
K+V SATLT+DP+K+A L LH+P + GE +P L+ Y +
Sbjct: 239 QKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIEDDAIVLSVPPTLQEYHV 298
Query: 313 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
S+ KP+ L L+ S + F S E+ RL LL
Sbjct: 299 SVSSE-KPILLYHLIHSKNLTNILCFVKSNEAAARLHRLL 337
>gi|302499370|ref|XP_003011681.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
gi|291175233|gb|EFE31041.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 64/299 (21%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LRAL+++PTR+L QV+D + GL +G AVG +++ DE +++ +E Y
Sbjct: 296 LRALIIVPTRELVKQVRDACELCSSGSGLRIGTAVGSTALKDEQAQI-----MEQISVYR 350
Query: 162 PE---------------------DVLQELQS--------------AVDILVATPGRLMDH 186
PE D + E + VD+L+ TPGRL+DH
Sbjct: 351 PESTRSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCIESSPCVDVLICTPGRLVDH 410
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
I +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+A GS
Sbjct: 411 IRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGS 460
Query: 247 LKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR 300
L+ + K YP +L K++LSAT+T+D KL L LH+P L + G R
Sbjct: 461 LEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAER 511
>gi|358396993|gb|EHK46368.1| hypothetical protein TRIATDRAFT_218284 [Trichoderma atroviride IMI
206040]
Length = 863
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 165/344 (47%), Gaps = 71/344 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ SP+ VS P L L P+ L+ G + F VQ A + DL
Sbjct: 274 PWLASPIRVSQDTQTPFTDLGIL-PKAARFLEQKGYTEAFAVQTAALPLLLPTNKQPGDL 332
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG--- 129
+++ TGSGKTL+YALPIV+ LSN + LR LVVLPTR+L Q ++VF A A
Sbjct: 333 LVSAATGSGKTLAYALPIVRDLSNSVITRLRCLVVLPTRELVKQAQEVFELCAKAYEGED 392
Query: 130 ---LSVGLAVGQSSIADEIS-----------ELIKRPKLEAGICYDPEDVLQEL------ 169
+ +G+A+G S+A E E K+ + EA E+ L EL
Sbjct: 393 RKRVRIGIAIGNQSLASEQDILVTKETRYDPETYKQLEEEASSKSTSEEDLDELLTSSDT 452
Query: 170 -----------------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
S VDIL+ TPGRL++HI+ T GFTL ++ +LVVDE D+LL +
Sbjct: 453 RRTNPRIGPWQGQVIDFHSKVDILICTPGRLVEHIDQTPGFTLSYIRWLVVDEADKLLAQ 512
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++Q WL VL F + +G+ R F D PY + K++L
Sbjct: 513 SFQGWLDVVL--------------DKFKVNHYGA----------RDFPDMPYSGVRKILL 548
Query: 273 SATLTQDPNKLAQLDLHHP--LFLTTGE----TRYKLPERLESY 310
SATLT+D + L QL L P + L +G + LP+ L Y
Sbjct: 549 SATLTRDLSLLNQLALKRPKLIVLESGSDVQVAEHSLPDLLREY 592
>gi|315043800|ref|XP_003171276.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
gi|311345065|gb|EFR04268.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
Length = 813
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 170/338 (50%), Gaps = 69/338 (20%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L++ G + PVQ AV GP + D+C+++ TGSGKTL+Y LP+ L V
Sbjct: 233 LKDKGYTEALPVQSAVIPLLAKGPTRYTGDICVSAATGSGKTLAYVLPLFAGLKRLPVAK 292
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RPKLEA 156
LRA++++PTR+L QV+D A GL +G AVG +++ DE ++++K RP+
Sbjct: 293 LRAVIIVPTRELVKQVRDACELCASGSGLRIGTAVGSTALKDEQTQIMKQTRMYRPESTG 352
Query: 157 GIC----------------YDPE---------DVLQELQSAVDILVATPGRLMDHINATR 191
C Y E D + E VDIL+ TPGRL+DHI +T+
Sbjct: 353 SQCDREMTADEWASFSLTDYIAEAEEYSKTLPDHVIEWSPCVDILICTPGRLVDHIRSTK 412
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
GF L+ L +L++DE DRLL E++Q W+ TVL + ++ + G L+ +
Sbjct: 413 GFILDSLEWLIIDEADRLLNESFQEWVETVLPALDTKEQS----------TTTGPLQQL- 461
Query: 252 RCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 296
+GF +P L K++LSAT+T+D KL L LH+P +
Sbjct: 462 ----TKGFS---FPLGSRNLQKVILSATMTRDITKLNSLRLHNPKLVVVDGADMNDATRN 514
Query: 297 GET----RYKLPERL-ESYKLICESKLKPLYLVALLQS 329
GET LP L ES + + KPLYL+ LLQ+
Sbjct: 515 GETGPDSNITLPSLLDESLIPVGDGSEKPLYLLKLLQT 552
>gi|327356903|gb|EGE85760.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 848
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 155/294 (52%), Gaps = 48/294 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + LR LVV+PTR+L Q +D A GL +G AVG +S+ +E + LIK
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDACELCATRTGLRIGTAVGTASLKEEQALLIKHD 385
Query: 153 KL----------------EAGICYDPEDVLQELQSA--------------VDILVATPGR 182
+L E+ ++ ++ + E++ + +DIL+ TPGR
Sbjct: 386 QLYSPSNRRIGNGHQMIAESWASFNFQEYITEVERSHSAFPDHVTTPSPNIDILICTPGR 445
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
L+DHI +T+GF+LEHL +LV+DE DRLL E++Q W+ V+ + + LP
Sbjct: 446 LVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPD 505
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
+ C PRL K++LSAT+T+D KL L L +P + +
Sbjct: 506 LGWQI-----C----------KPRLRKIILSATMTRDIAKLNSLRLQNPKLVVS 544
>gi|239612589|gb|EEQ89576.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 155/294 (52%), Gaps = 48/294 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + LR LVV+PTR+L Q +D A GL +G AVG +S+ +E + LIK
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDACELCATRTGLRIGTAVGTASLKEEQALLIKHD 385
Query: 153 KL----------------EAGICYDPEDVLQELQSA--------------VDILVATPGR 182
+L E+ ++ ++ + E++ + +DIL+ TPGR
Sbjct: 386 QLYSPSNRRIGNGHQMIAESWASFNFQEYITEVERSHSAFPDHVATPSPNIDILICTPGR 445
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
L+DHI +T+GF+LEHL +LV+DE DRLL E++Q W+ V+ + + LP
Sbjct: 446 LVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPD 505
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
+ C PRL K++LSAT+T+D KL L L +P + +
Sbjct: 506 LGWQI-----C----------KPRLRKIILSATMTRDIAKLNSLRLQNPKLVVS 544
>gi|380486755|emb|CCF38497.1| DEAD/DEAH box helicase, partial [Colletotrichum higginsianum]
Length = 621
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 187/378 (49%), Gaps = 83/378 (21%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+A K S LP W+ +P+ V+ P + ++P+ L+ G F VQ A
Sbjct: 258 DASKPSYETLPHWLAAPIRVAPDTRTPFVDI-GINPKAAQILEARGFRDAFAVQTAAVPL 316
Query: 62 TIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
+ P R DL + + TGSGKTL+YALPIV+ LS AV LRALVVLPTR+L Q ++
Sbjct: 317 LL-PSCKHRQGDLLVAAATGSGKTLAYALPIVRDLSQSAVTRLRALVVLPTRELVKQAQE 375
Query: 120 VFAAIAPAVG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE---------- 163
VF A A + VG++VG + E + L++R + YDPE
Sbjct: 376 VFELCAGAFDGRDQKRVRVGVSVGSQQLRHEQAALVERNER-----YDPEAYRAAHQREL 430
Query: 164 DVLQELQ------------------------SAVDILVATPGRLMDHINATRGFTLEHLC 199
D +E++ S VD+L+ TPGRL++HIN T GF+L+++
Sbjct: 431 DAWKEVEESTADADDDAAVASSLPDHVVNYASRVDVLICTPGRLVEHINLTPGFSLDYVR 490
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
+LVVDE D+LL +++Q WL V+ R+D ++FS R F
Sbjct: 491 WLVVDEADKLLAQSFQGWLDVVMPKLRTD--DKFS---------------------ARDF 527
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE--------TRYKLPERL-ES 309
D + K+VLSATLT+D + L+ L L P L + G+ + LP L ES
Sbjct: 528 PDSNLSGVRKVVLSATLTRDLSLLSGLQLRRPQLIVLEGDQADGTAPIAEHTLPTLLKES 587
Query: 310 YKLICESKLKPLYLVALL 327
+ ++ LKPLYL+ LL
Sbjct: 588 AIRVHDANLKPLYLIDLL 605
>gi|429856827|gb|ELA31721.1| ATP-dependent RNA helicase dbp6 [Colletotrichum gloeosporioides
Nara gc5]
Length = 877
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 186/382 (48%), Gaps = 77/382 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ +P+ V+ P + ++P+ L++ G F VQ A + P R
Sbjct: 282 PWLAAPIRVAPDTRTPFSEI-GINPKAAQILESKGFKDAFAVQTAAVPLLL-PSCKHRQG 339
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG- 129
DL + + TGSGKTL+YALPIV+ +S AV LRAL+VLPTR+L Q ++VF A A
Sbjct: 340 DLLVAAATGSGKTLAYALPIVRDISQGAVTRLRALIVLPTRELVKQAQEVFELCAGAFDG 399
Query: 130 -----LSVGLAVGQSSIADEISELIKRPKLEAGICY-----------------DPE---- 163
+ +G+A+G + E + LI+R + Y DPE
Sbjct: 400 RDQKRVRIGIAIGSQQLKYEQTNLIEREEKYDPEAYQAANQRELEAWKDVEEVDPETEDS 459
Query: 164 ----------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
D + + S VD+L+ TPGRL++HIN T GF+L+++ +LVVDE D+LL ++
Sbjct: 460 TSRVEAGSLPDHIVDYTSKVDVLICTPGRLVEHINLTPGFSLDYVRWLVVDEADKLLAQS 519
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q WL V+ R+ +FS R F D + K+VLS
Sbjct: 520 FQGWLDVVMPKLRT---KKFS---------------------ARDFPDSNLSGVRKVVLS 555
Query: 274 ATLTQDPNKLAQLDLHHP-LFLTTGE--------TRYKLPERL-ESYKLICESKLKPLYL 323
ATLT+D + L+ L L P L + GE + LP L ES + ++ LKPLYL
Sbjct: 556 ATLTRDLSLLSGLQLRRPQLIVLEGEKADGTAPIAEHTLPTLLKESAIRVHDANLKPLYL 615
Query: 324 VALLQSLGEEKCIVFTSSVEST 345
+ LL LG +S E+T
Sbjct: 616 IDLL--LGGHLMSEASSKAEAT 635
>gi|296803502|ref|XP_002842604.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
gi|238838923|gb|EEQ28585.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
Length = 836
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 179/368 (48%), Gaps = 71/368 (19%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQETIGPGL 67
PW+ +P S L D L AL+ G + PVQ AV T PG
Sbjct: 238 PWLAAPSTASAGHPSSFSDLGIGD-SLVDALKAKGFTEALPVQSAVIPLLSKSSTRYPG- 295
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
D+C+++ TGSGKTL+Y LP+ L V LRA++++PTR+L QV+D +
Sbjct: 296 ---DVCVSAATGSGKTLAYVLPLFSGLERLPVARLRAVIIVPTRELVKQVRDACELCSGG 352
Query: 128 VGLSVGLAVGQSSIADEISELIKRPKL------------------EAGICYDPEDVLQEL 169
GL +G AVG S++ DE ++++++ + E + D + E+
Sbjct: 353 SGLRIGTAVGSSALKDEQTQIMEQNRAYKPDSWTSGGNGSNKMTAEEWASFSLTDYVAEV 412
Query: 170 QS--------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
+ VDIL+ TPGRL+DHI +T+GFTLE L +LV+DE DRLL E++Q
Sbjct: 413 EEYSKTLPDHVIESSPCVDILICTPGRLVDHIRSTKGFTLESLEWLVIDEADRLLNESFQ 472
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL-VKMVLSA 274
W+ VL + ST + K I C VE PR K+VLSA
Sbjct: 473 EWVDIVLPALDG------VEKSTCSGPLYQLTKGI-SCPVE--------PRWPQKVVLSA 517
Query: 275 TLTQDPNKLAQLDLHHPLFLT-----------TGE-TRYKLPERL-ESYKLICESKLKPL 321
T+T+D KL L L +P +T TG+ + + LP L ES L+ + KPL
Sbjct: 518 TMTRDITKLNSLRLQNPKLVTVDAAEKGNAGLTGQDSNFALPSLLDESSILVGDGSEKPL 577
Query: 322 YLVALLQS 329
YL+ L++S
Sbjct: 578 YLLKLVRS 585
>gi|242778909|ref|XP_002479334.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722953|gb|EED22371.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 836
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 184/384 (47%), Gaps = 84/384 (21%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP------CLDPRLKVALQNMGISSLFPV 54
E ++K + +P W+ +PV S ++ D P LD + L+ G S PV
Sbjct: 220 ETSEKPTYSTMPDWITNPVTKSPYDRE--DGQPVKFENISLDRTVVSKLEKHGYSEATPV 277
Query: 55 QVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
Q T+ P L + DLC+++ TGSGKTLSY LPI Q+L +V LRALV++
Sbjct: 278 QA-----TVIPLLLDEQHRHRGDLCVSASTGSGKTLSYVLPINQSLQRESVARLRALVIV 332
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE----- 163
PTR+L Q ++ F A L +G A+G + DE ++I+ + + Y+ +
Sbjct: 333 PTRELVKQAREAFEACGS--NLRIGTAIGSVVLKDEQQKIIRWDSVYSPEKYNADQQRTM 390
Query: 164 --------DVL--------------QELQSA---VDILVATPGRLMDHINATRGFTLEHL 198
D+L Q +Q A +D+L++TPGRL+DHI T GF+L HL
Sbjct: 391 SESDWAEFDLLKYRDEVVRAGDLAPQYIQVARPNIDVLISTPGRLVDHIRQTEGFSLRHL 450
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
+LVVDE DRLL E++Q W+ ++ + D+ + R G R
Sbjct: 451 QWLVVDEADRLLNESFQEWVSVLMGALDKEKTANIGDS------------VLARIG--RP 496
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------ETRYKL-------- 303
+ PYPR K++LSATLT D KL L L +P + G E R K
Sbjct: 497 IQS-PYPR--KVILSATLTNDITKLNSLRLENPKLVAIGSRNMDSNEERVKHEAEQFVLP 553
Query: 304 PERLESYKLICESKLKPLYLVALL 327
P +E + + + KP+YL+ LL
Sbjct: 554 PSLMEHFVPVGDGFEKPIYLMKLL 577
>gi|171689754|ref|XP_001909817.1| hypothetical protein [Podospora anserina S mat+]
gi|170944839|emb|CAP70951.1| unnamed protein product [Podospora anserina S mat+]
Length = 898
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 167/348 (47%), Gaps = 66/348 (18%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC 73
W+ SP+ V+ + L KV LQ+ G F VQ AV + + D+
Sbjct: 297 WIASPIRVTESTTKSFEELKIAAEPAKV-LQSKGFKEAFAVQTAVLPLLLPNPDRQGDVV 355
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG---- 129
+ +PTGSGKTLSY LP++Q +S + LRAL+VLPTRDL QV+ A A A
Sbjct: 356 VAAPTGSGKTLSYVLPMIQDISYGRITNLRALIVLPTRDLVQQVQQTCEACAAAFASNGG 415
Query: 130 --LSVGLAVGQSSIADEISELIKRPKLEAGICYD-----------------PEDVLQELQ 170
+ +G AVG +E S ++++ K G D PED
Sbjct: 416 KRVKIGTAVGNKVFKEEQSAIVEK-KARYGTAEDSHSMEALSSWTASENINPED----YA 470
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
S VD+L+ TPGRL++HI T GFTL+++ +LVVDE D+LL + +Q WL VL
Sbjct: 471 SKVDVLICTPGRLVEHIKQTPGFTLDYVRWLVVDEADKLLAQDFQQWLNLVLD------- 523
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQDPNKLAQ 285
+ VER + +P+ + K++LSAT+T D + L
Sbjct: 524 ---------------------KLSVERRPSRRVFPKSNKKGVRKVILSATMTHDISMLNL 562
Query: 286 LDLHHPLFLTTGETR---YKLPERLESYKL-ICESKLKPLYLVALLQS 329
L L P + T+ LP L+ Y + + E LKPLYLV LLQS
Sbjct: 563 LKLSRPKLVVLEGTKAGDQSLPPLLKEYAIKVREPSLKPLYLVDLLQS 610
>gi|238483821|ref|XP_002373149.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220701199|gb|EED57537.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 870
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 179/375 (47%), Gaps = 76/375 (20%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
E+ +K S LP W+ +P+ S E P L + L++ L++ G F VQ V
Sbjct: 226 EQDEKPSYSSLPSWLANPLRTSAEEKTPFSSLGIEENVLRI-LESNGYKEAFAVQSTVIP 284
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
+ G D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++
Sbjct: 285 LLLQGSKNHPGDICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQARE 344
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-------------- 165
A GL V AVG +I +E L++ ++ Y PE+
Sbjct: 345 ACELCAAGSGLRVASAVGNVAIKEEQRSLMRVDEV-----YGPENFKLRQQDKLTDNDWL 399
Query: 166 ---------------------LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+++ + VDIL+ TPGRL+DHI T+GFTL+HL +LV+D
Sbjct: 400 NFSLQDYISDAGDQSESLPGYIRKAEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVID 459
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DRLL E++Q W+ V+ ++ + DA TF F S K + G+ KD
Sbjct: 460 EADRLLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPIQTKD--- 507
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPER 306
PR K++LSAT+T+D +KL L L +P + G +Y LP R
Sbjct: 508 PR--KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSREDESGIHDRIGDQYTLPPR 565
Query: 307 LESYKL-ICESKLKP 320
L+ Y L + + KP
Sbjct: 566 LKEYSLSVGDGSQKP 580
>gi|149235381|ref|XP_001523569.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013489|sp|A5E726.1|DBP6_LODEL RecName: Full=ATP-dependent RNA helicase DBP6
gi|146452978|gb|EDK47234.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 663
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 177/361 (49%), Gaps = 71/361 (19%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE--------TI 63
L W+ +P +++ + P P L P + L+++G + F VQV V + +
Sbjct: 207 LDWLTTPEYIAIADTKPFSEFP-LSPFMHENLESLGFENAFAVQVGVLSKLLPEIQANKL 265
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P F D+ +N+ TGSGKTL+Y++PI+++L +R V +RA+V++PT+ L QV+
Sbjct: 266 RPDAFG-DVLVNASTGSGKTLAYSIPIIESLKDRVVPRVRAIVLVPTKPLINQVRATMLQ 324
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
+A L++ SI +E LI + D++++TPGRL
Sbjct: 325 LALGTNLNIVSLKNDISIREESERLI--------------------ELVPDVVISTPGRL 364
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+ A +L L YLVVDE DRLL +++Q W ++ ++ + +
Sbjct: 365 VEHL-AMDSISLSSLRYLVVDEADRLLNQSFQNWSQILI--------SKIHLQQVYDVAN 415
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
SLK + K + SATLT D KLA LD H+P L +++
Sbjct: 416 VWSLK------------------VQKFIFSATLTTDAGKLASLDFHNPRLLIVNDSQRLV 457
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTL 351
+ +P L YKL + +S LKPL L L + +EK +VFT S ES+ RLCTL
Sbjct: 458 NELFSVPAMLSEYKLNFGVAKSSLKPLILAKFL--IAQEKLSDVLVFTKSNESSIRLCTL 515
Query: 352 L 352
L
Sbjct: 516 L 516
>gi|317140099|ref|XP_003189236.1| ATP-dependent RNA helicase dbp6 [Aspergillus oryzae RIB40]
Length = 858
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 179/375 (47%), Gaps = 76/375 (20%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
E+ +K S LP W+ +P+ S E P L + L++ L++ G F VQ V
Sbjct: 226 EQDEKPSYSSLPSWLANPLRTSAEEKTPFSSLGIEENVLRI-LESNGYKEAFAVQSTVIP 284
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
+ G D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++
Sbjct: 285 LLLQGSKNHPGDICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQARE 344
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-------------- 165
A GL V AVG +I +E L++ ++ Y PE+
Sbjct: 345 ACELCAAGSGLRVASAVGNVAIKEEQRSLMRVDEV-----YGPENFKLRQQDKLTDNDWL 399
Query: 166 ---------------------LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+++ + VDIL+ TPGRL+DHI T+GFTL+HL +LV+D
Sbjct: 400 NFSLQDYISDAGDQSESLPGYIRKAEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVID 459
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DRLL E++Q W+ V+ ++ + DA TF F S K + G+ KD
Sbjct: 460 EADRLLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPIQTKD--- 507
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPER 306
PR K++LSAT+T+D +KL L L +P + G +Y LP R
Sbjct: 508 PR--KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSQEDESGIHDRIGDQYTLPPR 565
Query: 307 LESYKL-ICESKLKP 320
L+ Y L + + KP
Sbjct: 566 LKEYSLSVGDGSQKP 580
>gi|242019954|ref|XP_002430423.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515553|gb|EEB17685.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 518
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 178/400 (44%), Gaps = 54/400 (13%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVA 57
M + KK + W+ +P VS+ + +D + LD L+ GI+ FPVQ
Sbjct: 1 MNDKKKVKRKLPDWLSNPSVVSVDLKNLNYTIDSISGLDKIFIDKLRANGITHFFPVQHQ 60
Query: 58 VW-----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
V E L+ D+C+++PTGSGKTL++ LPI+Q L R + +RALVVLP +D
Sbjct: 61 VIPCVLENERKPYLLWPNDICVSAPTGSGKTLAFVLPILQVLYKRIIPKIRALVVLPVQD 120
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L + S E + L K D L S
Sbjct: 121 LANQVFKVFETYAEPTDLKVLLLTPKRSFTAEQNLLYKF------------DDLGNYHSL 168
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+V TPGRL++H+ T L YLV+DE DR++ WL L + N
Sbjct: 169 TDIIVTTPGRLVEHLTKTNELNFSELKYLVIDEADRVMENVQNDWL---YHLNKYIN--- 222
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP- 291
S+ + S I K P K++ SATL+QDP KL L L HP
Sbjct: 223 -SECCKSYQAPIVSYNNI--------LNQKRPPN--KLLFSATLSQDPEKLQALGLFHPR 271
Query: 292 LFLTTGET----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
LF + E+ +Y P L+ Y +C KPL L LL S +
Sbjct: 272 LFTSVVESGKSTEKNNNDESKFIGKYTTPAELKEYYTVCSKVNKPLLLHHLLISKSWKNI 331
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
+ F +S +T +L +L + + +++ S QS R
Sbjct: 332 LCFVNSSAATFKLAFILKKLCKKKYTVQQLSANIVQSKRN 371
>gi|116205339|ref|XP_001228480.1| hypothetical protein CHGG_10553 [Chaetomium globosum CBS 148.51]
gi|88176681|gb|EAQ84149.1| hypothetical protein CHGG_10553 [Chaetomium globosum CBS 148.51]
Length = 836
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 169/365 (46%), Gaps = 78/365 (21%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ SPV V + P L + P L++ G F VQ AV + + D+
Sbjct: 244 PWLASPVRVGPDKTRPFTEL-GISPESSKILESKGFKDAFAVQTAVLPLLLPSPDRQGDV 302
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS- 131
+ +PTGSGKTLSY LP+V +S V LRAL+VLPTRDL QV+ F A A ++
Sbjct: 303 VVAAPTGSGKTLSYVLPMVHDISKGRVTRLRALIVLPTRDLVQQVQLAFEACTAAFAING 362
Query: 132 -----VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ---------------- 170
+G A+G +E S ++ + + YDP+ Q LQ
Sbjct: 363 GKRVKIGTAMGNRVFKEEQSVIMSQEQR-----YDPQGYEQYLQKQNRPVNLEDSEDEDG 417
Query: 171 ----------------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
S VDIL+ TPGRL++HI T GF+L+++ +L+VDE D+
Sbjct: 418 DEDDNLELERSQPLPSHVIAHESKVDILICTPGRLVEHITKTSGFSLDYVRWLIVDEADK 477
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
LL + +Q WL TV + G I + G R F +
Sbjct: 478 LLAQDFQQWLDTVTE-------------------KLG----IGKPGA-RDFPGSNKSGVQ 513
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLESYKL-ICESKLKPLYLV 324
K++LSAT+T+D + L L L P + T+ LP L+ Y + I E LKPLYLV
Sbjct: 514 KVILSATMTRDLSLLNGLKLSRPKLIVVEGTKAGEQNLPALLKEYAIKIREPSLKPLYLV 573
Query: 325 ALLQS 329
LLQS
Sbjct: 574 DLLQS 578
>gi|322696068|gb|EFY87866.1| DEAD box ATP-dependent RNA helicase, putative [Metarhizium acridum
CQMa 102]
Length = 877
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 163/345 (47%), Gaps = 86/345 (24%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW- 59
E+ K + LP W+ +P+ V+ P L L PR L + G + F VQ A
Sbjct: 292 EDESKPTYDTLPLWLSNPIRVAQDTKAPFTDLGIL-PRPSRILADKGYNEAFAVQTAAIP 350
Query: 60 ----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
PG DL +++ TGSGKTL+YALPIV+ +SN V LRALVVLPTR+L
Sbjct: 351 LLLPTSKHRPG----DLLVSAATGSGKTLAYALPIVRDISNGVVTRLRALVVLPTRELVK 406
Query: 116 QVKDVFAAIAPAVG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE--DVLQ 167
Q +DVF A A + +G+A+G SI E +I+R YDP+ +Q
Sbjct: 407 QAQDVFEVCAKAYEGEDRKRVRIGVAIGSQSIKSEQEAIIERESR-----YDPDAYSKIQ 461
Query: 168 ELQ--------------------------------------SAVDILVATPGRLMDHINA 189
E Q S VD+L+ TPGRL++HI
Sbjct: 462 EEQRQQRANTFSADVDDTHDLDSPNTDVRLGPWKGEVVDFSSRVDVLICTPGRLVEHIEQ 521
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T GF+L+++ +LVVDE D+LL +++Q WL VL+ R N+FS
Sbjct: 522 TPGFSLDYIRWLVVDEADKLLAQSFQGWLDLVLEKFRV---NKFS--------------- 563
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
R F D Y + K++LSATLT+D + L QL L P +
Sbjct: 564 ------ARDFPDMAYSGVRKVILSATLTRDLSLLNQLALRRPRLI 602
>gi|367009624|ref|XP_003679313.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
gi|359746970|emb|CCE90102.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
Length = 627
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 67/335 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQE----------TIGPGLFER--DLCINSPTGSGK 82
+ P+L ++ ++ FP+Q A+ + T L R D+ +N+ TGSGK
Sbjct: 177 MQPKLLQNVEKYFSANSFPIQTALLENLLPILNFSLSTTKKHLTRRVGDVLVNASTGSGK 236
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PIVQ LS R V LRAL+++PT+ L QV D +A GL + ++ ++S+
Sbjct: 237 TLAYSIPIVQLLSKRTVNRLRALIIVPTKLLINQVYDTINKLAQGTGLIISISKLENSLK 296
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E + +QS D+L+ TPGRL+DH+ + ++++L L+
Sbjct: 297 EEHKKF--------------------MQSEPDVLIITPGRLVDHL-QMKSISMKNLQMLI 335
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE D LL +++Q W P +L S + K +R G
Sbjct: 336 LDEADHLLNQSFQNWCPRLL-------------------SQITAEKHDQRPG-------- 368
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L+L++P LF+ Y LPE+L+ Y + +S
Sbjct: 369 ---NVIKMVFSATLTTNTEKLHGLNLNNPRLFIMDSVKLYSLPEKLQEYIVNIPTSKSLY 425
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
KPL L+ LL + K +VF S E++ RL LLN
Sbjct: 426 KPLILLHLLDHMKSAKVLVFVKSNEASLRLACLLN 460
>gi|241751464|ref|XP_002406051.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215506028|gb|EEC15522.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 393
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 143/304 (47%), Gaps = 64/304 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RD+C+++PTGSGKTL+Y +PIV++L R +R +RA+VVLP ++LA QV+ VF
Sbjct: 4 RDICVSAPTGSGKTLAYVIPIVESLKPRIMRAIRAVVVLPVKELAAQVQAVFQQYLRGTS 63
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L L G ++E L+ + + S VDI+VATPGRL+DHI
Sbjct: 64 LRSQLVTGTKPFSEEQLSLVHKNA-------------RGYSSLVDIIVATPGRLLDHIRK 110
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T GF+L L + V+DE DR++ + +P V Q
Sbjct: 111 TPGFSLHLLKFFVLDEADRVIEDVRTTLIPEVEQAVEPAQ-------------------- 150
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE---------- 298
K++ SATLTQDP KL L L P LF G+
Sbjct: 151 -------------------KLLYSATLTQDPEKLQSLMLFQPKLFTAAGKRDPAVERAAF 191
Query: 299 -TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
+Y P+ L + + ++ KPL L L+ + G + FT + + HRLC ++ G
Sbjct: 192 AGKYTTPQGLSEFYRVVQNAKKPLALWDLVANRGYTGTLCFTGTKDDAHRLCLVIKEMGG 251
Query: 358 LRIK 361
+R++
Sbjct: 252 VRVE 255
>gi|294949064|ref|XP_002786034.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239900142|gb|EER17830.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 174/380 (45%), Gaps = 84/380 (22%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG------PGLFERDLCI 74
+S EDCP L + AL+ MGIS LFPVQ V +G ++ DLC+
Sbjct: 66 LSSIEDCPSVTEFELSKTCRKALKGMGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCV 125
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVG 133
PTG GKTL Y LPI Q LS+R + LRALV+ PTRDLALQVK+V V
Sbjct: 126 AVPTGQGKTLGYLLPIFQLLSHRKYQTLRALVLAPTRDLALQVKEVADHFTGGKDNFKVD 185
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV--DILVATPGRLMDHINATR 191
VGQ Y + +E S+ D+LVATP R +D I R
Sbjct: 186 CVVGQ---------------------YHAQTFAEEDGSSAGPDVLVATPSRALDLITGER 224
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
++ + ++V+DE DRLL + +A + V R +AS
Sbjct: 225 -VPVDGIRWMVLDEADRLLNSSREATVEVV---------RRVMEAS-------------- 260
Query: 252 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-RYKLPERLESY 310
PR +M+ SAT+T +P KLAQL L P FL + +T + PE L
Sbjct: 261 -------------PRCQRMLFSATMTSNPQKLAQLALSRPFFLLSTQTGAHATPENLRHR 307
Query: 311 KLICES-KLKPLYLVALL-------QSLGEEKCIVFTSSVESTHRL------CTLLNHFG 356
++ + + KP LV++L S + ++F SVE HRL C + N
Sbjct: 308 FVVARAEQKKPGVLVSILGEIYPPTASEATSRTMIFCGSVEHAHRLTRLLQICVVGNENI 367
Query: 357 ELRIKIKEYSGL--QRQSVR 374
+ IKI+E+S Q+Q VR
Sbjct: 368 KEGIKIREFSAALNQKQRVR 387
>gi|378730090|gb|EHY56549.1| DEAD/DEAH box helicase [Exophiala dermatitidis NIH/UT8656]
Length = 810
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 178/382 (46%), Gaps = 84/382 (21%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI- 63
K + LP W +P+ VS D L + L L+ G+ + FPVQ AV +
Sbjct: 199 KPTYSTLPGWQAAPLHVSPELTATFDKL-GVSHELLDNLRRNGLETAFPVQAAVLPLLLD 257
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
G DLC+++ TGSGKTL+Y LP V++L R LRA++V+PTR+L QV++
Sbjct: 258 GSKKHNGDLCVSAATGSGKTLAYVLPAVESLRGRVGTKLRAVIVVPTRELVKQVRETCEI 317
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE--------------- 168
A L + VG SI +E L+ K+ YDPE +E
Sbjct: 318 CASGTSLKIATTVGSKSIKEEQDMLVAEEKI-----YDPEQYRKEQASPIDWSSLSLEKT 372
Query: 169 ------------------LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 210
+S VD+L+ TPGRL+DH+ +T GF L+ + +LVVDE D+LL
Sbjct: 373 IQKCSSEDPTDPIGYVTRYRSQVDLLITTPGRLVDHMKSTPGFNLDDVRWLVVDEADKLL 432
Query: 211 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR--LV 268
E+YQ W+ V +P+ T R + R + P PR +
Sbjct: 433 NESYQEWIEVV------------------VPALQSQAATQERDDLLR-YMRMPPPRRKVT 473
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFL-----TTGETR----------------YKLPERL 307
K++LSAT+T+D +KL L L++P + TTGE + +PE L
Sbjct: 474 KVLLSATMTRDVSKLNALGLYNPKMVVLEGATTGEMSTHDDAGASRSHDLNDAFHIPELL 533
Query: 308 ESYKL-ICESKLKPLYLVALLQ 328
E + + + KPLYL+ LL+
Sbjct: 534 EEAAIPVPDGSEKPLYLLQLLE 555
>gi|156847460|ref|XP_001646614.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
gi|160380624|sp|A7TFZ9.1|DBP6_VANPO RecName: Full=ATP-dependent RNA helicase DBP6
gi|156117293|gb|EDO18756.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 637
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 162/326 (49%), Gaps = 69/326 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
+DP+L +Q + FP+Q ++ ET+ P L F R D+ +N+ TGSG
Sbjct: 182 IDPKLLKNIQQNFSTDTFPIQ-SILLETLLPTLNFSYNITKKNFTRRVGDVLVNASTGSG 240
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KTL+Y++PI+Q LS R V LRALV++PT+ L QV + F +A L V ++ ++S+
Sbjct: 241 KTLAYSIPILQILSKRTVNKLRALVIVPTKLLINQVYETFNNLAQGTSLIVSISKLENSL 300
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+E +L LQ+ DIL+ TPGRL+DH+ + L +L +L
Sbjct: 301 KEENKKL--------------------LQNEPDILITTPGRLVDHLQSG-AVNLRNLKFL 339
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DRLL +++Q W +L ++D ++ +P
Sbjct: 340 VLDEADRLLNQSFQNWCNELLNKLKTDKQDH-------MPG------------------- 373
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESK 317
+VKMV SATLT + KL L ++P LF+ Y LP L+ Y L ++
Sbjct: 374 ----NIVKMVFSATLTTNTEKLHGLQFYNPKLFVMDSVKLYHLPRMLQEYNLHIPTAKTS 429
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVE 343
KPL+L+ LL + K +VF S E
Sbjct: 430 YKPLFLLRLLSEINGSKMLVFVKSNE 455
>gi|340517680|gb|EGR47923.1| predicted protein [Trichoderma reesei QM6a]
Length = 841
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 159/333 (47%), Gaps = 80/333 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW------QETIGPG 66
PW+ +P+ VS+ P L L P+ L+ G + F VQ A + PG
Sbjct: 287 PWLSAPIRVSVDTRTPFTELGIL-PKAARVLEQKGYTEAFAVQTAALPLLLPSNKQQQPG 345
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
DL +++ TGSGKTL+YALPIV+ +SN V LRALVVLPTR+L Q ++VF A
Sbjct: 346 ----DLLVSAATGSGKTLAYALPIVRDVSNSVVTRLRALVVLPTRELVKQAQEVFELCAK 401
Query: 127 AVG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ------------- 167
A + VG+A+G S+A E L+ R YDPE Q
Sbjct: 402 AYEGEDRKRVRVGIAIGNQSLASEQDLLVGRE-----TRYDPEAYKQLEQEASSSSSSSP 456
Query: 168 -------------------------------ELQSAVDILVATPGRLMDHINATRGFTLE 196
+ S VD+L+ TPGRL++H++ T GFTL
Sbjct: 457 SSQDDLDALLLLSGPDRRANPRLGPWQGQVIDFYSKVDVLICTPGRLVEHLDQTPGFTLS 516
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
H+ +LVVDE D+LL +++Q WL VL ++ + S +S L +
Sbjct: 517 HVRWLVVDEADKLLAQSFQGWLDVVLDKFKTTTSHHSSSSSNVLGA-------------- 562
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
R F D PY + K++LSATLT+D + L QL L
Sbjct: 563 RDFPDMPYSGVRKILLSATLTRDLSLLNQLALR 595
>gi|322710596|gb|EFZ02170.1| DEAD box ATP-dependent RNA helicase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 854
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 156/333 (46%), Gaps = 85/333 (25%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGL 67
PW+ +P+ V+ P L L PR L G + F VQ A PG
Sbjct: 285 PWLSNPIRVAQDTKAPFTDLGIL-PRPSRILAEKGYNEAFAVQTAAIPLLLPTSKRRPG- 342
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
DL +++ TGSGKTL+YALPIV+ +SN V LRALVVLPTR+L Q +DVF A A
Sbjct: 343 ---DLLVSAATGSGKTLAYALPIVRDISNGVVTRLRALVVLPTRELVKQAQDVFEVCAKA 399
Query: 128 VG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE--DVLQELQ--------- 170
+ +G+AVG SI E ++R YDPE +QE Q
Sbjct: 400 YEGEDRKRVRIGVAVGSQSIKSEQEAFMERESR-----YDPEAYSKIQEEQRQQRATTFS 454
Query: 171 -----------------------------SAVDILVATPGRLMDHINATRGFTLEHLCYL 201
S VD+L+ TPGRL++HI T GF+L+++ +L
Sbjct: 455 ADVDDTHDLDSTNIDARLGPWKGEVVDFSSKVDVLICTPGRLVEHIEQTPGFSLDYIRWL 514
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
VVDE D+LL +++Q WL VL+ + N+FS R F D
Sbjct: 515 VVDEADKLLAQSFQGWLDLVLEKFQV---NKFS---------------------ARDFPD 550
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
Y + K++LSATLT+D + L QL L P +
Sbjct: 551 MAYSGVRKVILSATLTRDLSLLNQLALRRPRLV 583
>gi|213407706|ref|XP_002174624.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
gi|212002671|gb|EEB08331.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 196/424 (46%), Gaps = 83/424 (19%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW- 59
++ + +S+ LP W+ +P V+ L L RL L I+ F VQ V
Sbjct: 58 DKKRTRSLQALPDWIANPTVVAPSTTVQFAEL-GLSKRLVELLAQNNITQGFAVQAGVIP 116
Query: 60 ----------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q PG DLC+++ TGSGKTL+Y LPI++ L V LR VV+P
Sbjct: 117 LLLQSSNKSIQRAHAPG----DLCVSAATGSGKTLAYVLPIIECLRTCIVTRLRCAVVVP 172
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
T++L +QV F L V GQ S+A E S L P + I
Sbjct: 173 TKELVVQVAKSFEQYCSGTKLRVCALTGQRSLAFEQS-LFLSPNGKDYIA---------- 221
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL---------PT 220
DI+V TPGR +DHI +T FTL+HL YLVVDE DRLL +++Q W+ P
Sbjct: 222 ----DIMVTTPGRFVDHIRSTPNFTLQHLRYLVVDEADRLLDQSFQGWVNAVMEELERPK 277
Query: 221 VLQ------------LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
VLQ L +D+ + + AST+LP ++ T+ K P L
Sbjct: 278 VLQGIDMHGLSGIERLPGADSNSGCNIASTYLP----NMPTL--------LPQKTAPCLQ 325
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------------YKLPERLESYKLIC 314
K+V SATLT++P K++ L L P L + + LP L+ + +
Sbjct: 326 KLVFSATLTRNPAKISALRLVRPRLLVVQDPSVSMEPDGDEEDTVLFSLPAALQEHHVGV 385
Query: 315 ESKLKPLYLVALLQSLGEEKCIVFTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQ 371
++ KPL L LL++ + + FT S ES +RL LL+ +++ ++G+ +
Sbjct: 386 TAE-KPLLLYHLLRTQQLQNTLCFTKSNESAARLYRLLELLDKGSSEPLRVGLFAGILTR 444
Query: 372 SVRR 375
+ RR
Sbjct: 445 ADRR 448
>gi|255726860|ref|XP_002548356.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134280|gb|EER33835.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 608
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 178/374 (47%), Gaps = 70/374 (18%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG---- 64
M L W+ P +S + P + L P + L+NMG SS F VQV+V I
Sbjct: 153 MKNLDWLTEPQYISPSDTKPFNEF-QLSPFMINNLENMGFSSAFAVQVSVLDMMIPEIKA 211
Query: 65 ----PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
P F D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L QVK
Sbjct: 212 HKLMPDPFG-DILVNASTGSGKTLAYSIPIIESLHKRVVPRVRAIILVPTKPLINQVKAT 270
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F ++ L V SI DE +L+K S DI+V+TP
Sbjct: 271 FLQLSSGTNLQVMALKNDISINDE-KQLLK-------------------NSIPDIIVSTP 310
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL++H+ +L L YLV+DE DRLL +++Q W +L +R + A
Sbjct: 311 GRLVEHL-IGDSISLSSLQYLVIDEADRLLNQSFQNWSQILL--------DRMNSAI--- 358
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
++ R V+ KMV SATLT D KL+ L P + +++
Sbjct: 359 -----NISEEWRLPVQ------------KMVFSATLTTDAGKLSSLKFFKPRLIIVNDSK 401
Query: 301 ------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCT 350
+ +P L YK+ + ++ LKPL L L S G+ ++FT S ES+ RL
Sbjct: 402 QLVNEIFTVPNTLSEYKIHLGVAKNSLKPLILARFLISKGKLSNVLIFTKSNESSIRLAE 461
Query: 351 LLN-HFGELRIKIK 363
LL F +L I I
Sbjct: 462 LLTILFKKLSIDIN 475
>gi|294901652|ref|XP_002777458.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239885094|gb|EER09274.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 173/378 (45%), Gaps = 80/378 (21%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG------PGLFERDLCI 74
+S EDCP L + AL+ MGIS LFPVQ V +G ++ DLC+
Sbjct: 66 LSSIEDCPSVTEFELSKTCRKALKGMGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCV 125
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVG 133
PTG GKTL Y LPI Q LS+R + LRALV+ PTRDLALQVK+V V
Sbjct: 126 AVPTGQGKTLGYLLPIFQLLSHRKYQTLRALVLAPTRDLALQVKEVADHFTGGKDSFRVD 185
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
VGQ A +E E G P D+LVATP R +D I R
Sbjct: 186 CVVGQYH-AQTFAE-------EDGSSAGP-----------DVLVATPSRALDLITGER-V 225
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
++ + ++V+DE DRLL + +A + V R +AS
Sbjct: 226 PVDGIRWMVLDEADRLLNSSREATVEVV---------RRVMEAS---------------- 260
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-RYKLPERLESYKL 312
PR +M+ SAT+T +P KLAQL L P FL +T + PE L +
Sbjct: 261 -----------PRCQRMLFSATMTSNPQKLAQLALSRPFFLLGTQTGAHATPENLRHRFV 309
Query: 313 ICES-KLKPLYLVALL-------QSLGEEKCIVFTSSVESTHRLCTLL------NHFGEL 358
+ + + KP LV++L S + ++F SVE HRL LL N +
Sbjct: 310 VARAEQKKPGVLVSILGEIYPPTASEATSRTMIFCGSVEHAHRLARLLQIYVVGNENIKE 369
Query: 359 RIKIKEYSGL--QRQSVR 374
IKI+E+S Q+Q VR
Sbjct: 370 GIKIREFSAALNQKQRVR 387
>gi|452002280|gb|EMD94738.1| hypothetical protein COCHEDRAFT_1048087, partial [Cochliobolus
heterostrophus C5]
Length = 604
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 168/359 (46%), Gaps = 51/359 (14%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + P L +D L+ G + VQ A+ + PG + D
Sbjct: 86 WLAQPTTIEASKTVPFSEL-GVDATYVKKLEKQGFKNALAVQTALL-PMLHPGFDQHLGD 143
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
+C+++ TGSGKTL+Y LPI++ L +RAV L A++V+P+R L Q V + +
Sbjct: 144 ICVSAKTGSGKTLAYLLPIIEALKDRAVPILSAIIVVPSRQLVNQALQVAEELCAGTRIK 203
Query: 132 VGLAVGQSSIADEISELIK-----RPK-----------------LEAGICYDPEDVLQ-- 167
VG A+G + A E +L+K PK +E G YD +
Sbjct: 204 VGTALGNVAFATEQKQLVKMRAQYDPKRAQELNEKASQQYQTGLMERGGPYDDLKKMSLG 263
Query: 168 ---ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 224
+ S VDIL+ TPGRL++HI T GF L ++ +LV+DE D+LL + +Q W ++
Sbjct: 264 HVPKYDSGVDILICTPGRLVEHIEHTTGFLLNNVRWLVIDEADQLLNQNFQGWASVLMDA 323
Query: 225 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 284
+ F +A + + + P +++K+VLSAT+ +D +KL
Sbjct: 324 VHGETRPEFMNARERMAKQVRDANSAWSVAL-------PQRQVIKVVLSATMEKDVSKLG 376
Query: 285 QLDLHHPLF------------LTTGETRYKLPERLESYKL-ICESKLKPLYLVALLQSL 330
L L P L T + ++LP RLE + + + + KPL+L+ +L S
Sbjct: 377 TLKLRRPKLVVVQDASTELQPLETEDNVFELPSRLEEFAVHVGDGANKPLHLLHVLLSF 435
>gi|427792293|gb|JAA61598.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 783
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 161/343 (46%), Gaps = 62/343 (18%)
Query: 48 ISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
I LFPVQ V W E L RD+C+++PTGSGKTL+Y +PI++ L R VR +
Sbjct: 320 IRKLFPVQEKVVPWLLSSEQRRSHLPPRDICVSAPTGSGKTLAYVIPIIEDLKVRVVRAV 379
Query: 103 RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
RA+VVLP ++LA QV VF L+V L G + A+E L+++
Sbjct: 380 RAVVVLPVKELAAQVHAVFLQYVGTTSLNVQLVTGTRTFAEEQGLLVRKG---------- 429
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
+ S VDI+VATPGRL+DHI T GF L L Y V+DE DR++ + +P V
Sbjct: 430 ---AKGYASLVDIVVATPGRLLDHIRKTPGFNLHLLKYFVLDEADRVIEDVQTTLIPEVE 486
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV-----------KMV 271
Q + FG+ K CG + +P V K++
Sbjct: 487 Q------------------AVFGTSKMNCTCGSTVHNRLCTHPLTVCSLQHCREPVQKLL 528
Query: 272 LSATLTQDPNKLAQLDLHHP-LFLTTGET--------------RYKLPERLESYKLICES 316
SATLTQDP+KL L L P LF T +Y P+ L + +
Sbjct: 529 YSATLTQDPDKLQSLMLFQPKLFTATAAVSMPGDEQRQKTFVGKYTTPQGLSEFYYLTHD 588
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
KPL + L+ + G + FT+S E HRL +L G +R
Sbjct: 589 NTKPLAVWDLVANHGFRDTLCFTASKEDAHRLSLVLKEMGSIR 631
>gi|152013488|sp|A2QA23.1|DBP6_ASPNC RecName: Full=ATP-dependent RNA helicase dbp6
gi|134055529|emb|CAK37175.1| unnamed protein product [Aspergillus niger]
Length = 593
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 175/352 (49%), Gaps = 50/352 (14%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERD 71
PW+ +P+ S E L +D L L++ G F VQ V + GP D
Sbjct: 107 PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGD 165
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A GL
Sbjct: 166 LCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGLR 225
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 191
V AVG +I DE E + G + E VDIL+ TPGRL+DH+ T+
Sbjct: 226 VASAVGNVAIKDEQRESL------PGYVHRSE-------PNVDILICTPGRLVDHLRYTK 272
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTI 250
GFTL++L +LV+DE DRLL E++Q W+ V+ S + P AFG S +
Sbjct: 273 GFTLKNLEWLVIDEADRLLNESFQEWVDVVMT----------SLDARKAPDAFGFSGNFL 322
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------------- 297
G+ K+ PR K+VLSAT+T+D KL L L +P + G
Sbjct: 323 SGLGLPIQSKE---PR--KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATEDESGGV 377
Query: 298 ---ETRYKLPERLESYKL-ICESKLKPLYLVALLQSLG--EEKCIVFTSSVE 343
+ ++ LP LE + + + + KPLYL+ LL S E K +VFT S E
Sbjct: 378 APSDEQFTLPPTLEEHTVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSE 429
>gi|367055610|ref|XP_003658183.1| hypothetical protein THITE_2124694 [Thielavia terrestris NRRL 8126]
gi|347005449|gb|AEO71847.1| hypothetical protein THITE_2124694 [Thielavia terrestris NRRL 8126]
Length = 828
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 174/374 (46%), Gaps = 80/374 (21%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K + LP W+ P+ V+ + P L + P L++ G VQ V + +
Sbjct: 226 KATYETLPRWLALPIRVAADKTQPFTAL-GIAPESAKILESKGFKHAVAVQTEVLPQILS 284
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
P D+ + +PTGSGKTLSY LPIV +S AV LRAL+VLPTRDL QV+ F
Sbjct: 285 PPDRYGDVVVAAPTGSGKTLSYVLPIVNDISRDAVTRLRALIVLPTRDLVQQVQQAFETC 344
Query: 125 APAVG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE--------------- 163
A + +G+AVG +E S + ++ YDP+
Sbjct: 345 TRAFTANGGRRVEIGIAVGNRMFKNEQSAI-----MDFEQKYDPQGYQRHAKKRDLIVDL 399
Query: 164 -------------DVLQE-----------LQSAVDILVATPGRLMDHINATRGFTLEHLC 199
DV +E +S VD+L+ TPGRL++HIN T GFTL+++
Sbjct: 400 DDWEAEDNPLDDLDVERERPQPLPYHVIAWKSKVDVLICTPGRLVEHINKTPGFTLDYVR 459
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
+LV+DE D+LL + YQ WL TVL + A F+ T + GV
Sbjct: 460 WLVIDEADKLLAQDYQQWLGTVLDKLAVEKPG----AREFM--------TTKNSGVR--- 504
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLESYKL-ICE 315
K++LSAT+T+D + L +L L P + T+ LP L + + I E
Sbjct: 505 ---------KIILSATMTRDLSLLNRLKLSWPRLVVVEGTKAGEQTLPALLREFAIKIRE 555
Query: 316 SKLKPLYLVALLQS 329
LKPLYLV LL++
Sbjct: 556 PSLKPLYLVDLLRN 569
>gi|212533797|ref|XP_002147055.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210072419|gb|EEA26508.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 904
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 177/373 (47%), Gaps = 76/373 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
P +SP D + D + LD + L+ G S PVQ T+ P L +
Sbjct: 234 PVTKSPYDREDGQPVKFDSI-SLDRGVVSKLEKHGYSEATPVQA-----TLIPLLLDEKY 287
Query: 71 ----DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
DLC+++ TGSGKTLSY LPI Q+L + RAL+V+PTR+L Q ++ F A
Sbjct: 288 RHQGDLCVSASTGSGKTLSYVLPINQSLQREPLPRFRALIVVPTRELVKQARESFEAC-- 345
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD-------PEDVLQEL---------- 169
L +G A+G ++ DE ++I+ + + YD ED E
Sbjct: 346 GSNLRIGTAIGNVALKDEQQKIIRWESVYSPEKYDQDQHKTLSEDDWSEFDLFKYRSEVE 405
Query: 170 -------------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
+ +D+L++TPGRL+DHI T GF+L L +L+VDE DRLL E++Q
Sbjct: 406 RTKDQLPQCVQVARPNIDVLISTPGRLVDHIRQTEGFSLRQLQWLIVDEADRLLNESFQE 465
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
W+ ++ ++ + ++A + + G + IR PYPR K++LSATL
Sbjct: 466 WVSVLMSAL---DKEKTANAGDSVLAEIG--RPIR----------SPYPR--KVILSATL 508
Query: 277 TQDPNKLAQLDLHHPLFLTTG-------------ET-RYKLPERL-ESYKLICESKLKPL 321
T D KL L L +P + G ET ++ LP L E Y + KP+
Sbjct: 509 TNDITKLNSLRLDNPKLVAIGSRNVNPDEEGANHETEQFVLPSTLTEHYIPVGNGSEKPI 568
Query: 322 YLVALLQSLGEEK 334
+L+ L+ + + K
Sbjct: 569 HLMKLILRINKSK 581
>gi|167536143|ref|XP_001749744.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771892|gb|EDQ85553.1| predicted protein [Monosiga brevicollis MX1]
Length = 2519
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 71/364 (19%)
Query: 34 CLDPRLKVALQNMGISSLFPVQ-------VAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
L P L+ A+Q + +LFP+Q +A W PG D C+ +PTGSGKTL Y
Sbjct: 177 ALHPELQRAMQRRDMKTLFPLQRAMVPRLIASWNAAGHPG----DFCVCAPTGSGKTLCY 232
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQV----KDVFAAIAPAVG---LSVGLAVGQS 139
LPI+ L+ R +RAL+VLPTR LALQV +D+ A G L V GQ+
Sbjct: 233 LLPILHLLAERVTPRIRALIVLPTRQLALQVVRVARDLLGASQLCAGREPLRVAALTGQT 292
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL- 198
S++ E + +LQE ++DI+VATPGRL+DH++ T G + L
Sbjct: 293 SLSQE------------------QKLLQE--QSIDIVVATPGRLVDHLHQT-GKEMGALG 331
Query: 199 -CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
C+ + LL ++YQ+WL + + E+ SD + F + T
Sbjct: 332 ACFQPI-----LLTQSYQSWLEALRKALYRGRES--SDPMNMTLTRFHAEGT-------- 376
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------RYKLPERLESY 310
RL +++ SATLT+DP KL L L P + + +P ++ Y
Sbjct: 377 --------RLQQLLFSATLTRDPEKLEPLRLAFPTMVIASSAHQDDANGKSTIPRSIDEY 428
Query: 311 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
+ C + +PL L++LL ++ ++F S++ + R+ LL +F EL + S Q+
Sbjct: 429 TVSCTATERPLVLLSLLIGFQMQRVLIFVSALNTAKRVTALLQYFDELSVAEVSSSQSQQ 488
Query: 371 QSVR 374
++ R
Sbjct: 489 ENTR 492
>gi|346972935|gb|EGY16387.1| ATP-dependent RNA helicase dbp6 [Verticillium dahliae VdLs.17]
Length = 775
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 165/351 (47%), Gaps = 84/351 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ +P+ V+ P + D K+ L++ G F VQ A + P R
Sbjct: 197 PWLAAPIRVAADTRTPFPEIGINDRSAKI-LESKGFKDAFAVQTAAIPLLL-PSCKHRQG 254
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG- 129
DL + + TGSGKTL+YALPIV+ +S V LRALVVLPTR+L Q ++VF A A
Sbjct: 255 DLLVAAATGSGKTLAYALPIVRDISQGQVTRLRALVVLPTRELVNQAQEVFQLCAAAFDA 314
Query: 130 -----LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE--------------------- 163
+ +G+++G + ++ + L+++ + YDPE
Sbjct: 315 RDQKRVRIGISIGSHQLKNDQANLVEQTER-----YDPEAYADAVKRDREAWTTLEDADA 369
Query: 164 ---------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
D + + S VD+L+ TPGRL+DHIN T GFTL+++ +LVVDE D+
Sbjct: 370 EGGPQASRPVMGNLPDHVVDYNSKVDVLICTPGRLVDHINHTPGFTLDYVRWLVVDEADK 429
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
LL +++Q WL V+ R+ N+FS R F D +
Sbjct: 430 LLAQSFQGWLDVVMPKLRT---NKFS---------------------ARDFPDSNLTGVR 465
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFL---------TTGETRYKLPERLESY 310
K+VLSATLT+D + L L L P + TT + LP L+ +
Sbjct: 466 KVVLSATLTRDLSLLGSLQLRRPQLIVLEGGKADGTTQVAEHTLPSSLKEF 516
>gi|146416595|ref|XP_001484267.1| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L QVK FA
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPLISQVKATFAM 293
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI DE Q LQ DI+V+TPGRL
Sbjct: 294 LSKNTNLSVVSLRSDISINDEA---------------------QRLQVVPDIIVSTPGRL 332
Query: 184 MDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ T+ PS
Sbjct: 333 VEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDSNPILELDQTWRPS 388
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-- 300
+ K+V SATLT D +L+ L L P + +
Sbjct: 389 ------------------------VQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHEL 424
Query: 301 ----YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVEST 345
+ +P L+ YKL S KPL L L S E+K + VF S E++
Sbjct: 425 VNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEAS 477
>gi|340975938|gb|EGS23053.1| hypothetical protein CTHT_0015380 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 852
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 167/360 (46%), Gaps = 74/360 (20%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC 73
W+ SP+ V+ P + L + P L++ G F VQ AV + + D+
Sbjct: 272 WLASPIRVNPEMKQPWNEL-GISPESARVLESKGFKDAFAVQTAVLPLLLPSADRQGDVV 330
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
+ +PTGSGKTLSY LP+V LS + LRAL+VLPTRDL QV+ A A ++ G
Sbjct: 331 VAAPTGSGKTLSYVLPMVHDLSRGRITRLRALIVLPTRDLVHQVQLACETCAAAFAVNGG 390
Query: 134 ------LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ----------------- 170
A+G DE + ++ + YDPE + L+
Sbjct: 391 KRVKIATAMGNRPFKDEQTVIMGEEQ-----KYDPEGFEKYLRKQDSFVDLEESDEEDDE 445
Query: 171 -----------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
S VDIL+ TPGRL++HI T GFTL+++ +L+VDE D+LL +
Sbjct: 446 LHIGRTLPLPYHVISHVSKVDILICTPGRLVEHITKTPGFTLDYVRWLIVDEADKLLAQD 505
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q WL TV + ST P A T + GV K++LS
Sbjct: 506 FQQWLATVTE-----------KLSTAKPGAR-DFPTSNKSGVR------------KVILS 541
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYK---LPERLESYKL-ICESKLKPLYLVALLQS 329
AT+T+D + L L L P + TR LP L + + + E+ LKPLYLV LL+S
Sbjct: 542 ATMTRDLSLLNGLKLSRPQLVLVEGTRAGEQVLPSTLSEFAIKVREASLKPLYLVDLLRS 601
>gi|223590192|sp|A5DK47.2|DBP6_PICGU RecName: Full=ATP-dependent RNA helicase DBP6
gi|190347303|gb|EDK39550.2| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 171/355 (48%), Gaps = 74/355 (20%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L QVK FA
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPLISQVKATFAM 293
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI DE Q LQ DI+V+TPGRL
Sbjct: 294 LSKNTNLSVVSLRSDISINDEA---------------------QRLQVVPDIIVSTPGRL 332
Query: 184 MDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ N S+
Sbjct: 333 VEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDS-NPISELD----- 382
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-- 300
+T R P + K+V SATLT D +L+ L L P + +
Sbjct: 383 -----QTWR-------------PSVQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHEL 424
Query: 301 ----YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVEST 345
+ +P L+ YKL S KPL L L S E+K + VF S E++
Sbjct: 425 VNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEAS 477
>gi|115397383|ref|XP_001214283.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192474|gb|EAU34174.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 853
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 167/343 (48%), Gaps = 73/343 (21%)
Query: 2 EEAKKKSMPVLP-WM----RSPVDV-SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ +K + LP W+ R+P D + F D ++H L L+N G F VQ
Sbjct: 214 EQQEKPTYSSLPSWLANPFRTPADERTKFADLGIEH------DLLKNLENNGYKEAFAVQ 267
Query: 56 VAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
AV + GP DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 268 SAVIPLLLKGPRNHPGDLCISAATGSGKTLSYVLPLVTALEQAPAPRMRGLIVVPTRELV 327
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE----------- 163
Q ++ A GL V AVG +I DE L++ ++ Y PE
Sbjct: 328 KQAREACELCAAGSGLRVASAVGNVAIKDEQRSLMRVDQV-----YGPEISRQRQHTKMT 382
Query: 164 --------------DV----------LQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
DV + + + VDIL+ TPGRL+DHI T+GFTL+HL
Sbjct: 383 DQDWTNFNLQEYVADVADRGDCLPGYVHKAEPNVDILICTPGRLVDHIRYTKGFTLKHLE 442
Query: 200 YLVVDETDRLLREAYQAWLPTVLQL--TRSDNENRFSDASTFLPSAFGSLKTI-RRCGVE 256
+LV+DE DRLL E++Q W+ V+ +R D++ AFGS I G+
Sbjct: 443 WLVIDEADRLLNESFQEWVDVVMTSLDSRKDSD------------AFGSSGQIMADLGLP 490
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
K+ PR K++LSAT+T+D KL L L +P + G +
Sbjct: 491 IQTKE---PR--KVILSATMTRDVTKLNSLRLLNPKLVLVGSS 528
>gi|406601292|emb|CCH47065.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 642
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 69/363 (19%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW---- 59
++ ++ L W+ +P + E P + P + L+++G + F Q+
Sbjct: 180 SRSQTNNSLNWLATPEYIKTDEIKPFKDFE-ISPIILKNLKDLGFDNAFATQIKTLGLLL 238
Query: 60 ---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
+ P + DL +N+ TGSGKTL+Y +PI+Q+L NR V LR ++++PT+ L Q
Sbjct: 239 PEINNKLNPNSIKGDLLVNASTGSGKTLAYTIPIIQSLQNRIVPRLRCIILVPTKPLINQ 298
Query: 117 VKDVFAAIAPAVGLSVGLAVGQS--SIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
V +I+ + L++ + +G+S ++ DE +LIK + D
Sbjct: 299 VYKTMDSISKGIDLNI-VTLGKSDLNLQDEHLKLIK--------------------NVPD 337
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I+++TPGRL+DH+N + L++L + V+DE DRLL +++Q W VL +T+ ++ N+ +
Sbjct: 338 IIISTPGRLVDHLNL-KSIDLKNLQWCVIDEADRLLNQSFQDW-SNVL-ITKLNDVNKGN 394
Query: 235 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LF 293
+ S FK P L+KM+ SATLT D KL+ L+ H+P L
Sbjct: 395 NISKI-------------------FK----PNLIKMIFSATLTTDSGKLSNLNFHNPRLI 431
Query: 294 LTTGETR-------YKLPERLESYKLICESK---LKPLYLVALLQSLG-EEKCIVFTSSV 342
+ E + LP +L + + S KPLYL+ L + L ++FT S
Sbjct: 432 IVNNEESILQNDKIFTLPTQLSEHTIKLSSNSSSHKPLYLLKLFEWLKYPHNVLIFTKSN 491
Query: 343 EST 345
EST
Sbjct: 492 EST 494
>gi|345563939|gb|EGX46922.1| hypothetical protein AOL_s00097g348 [Arthrobotrys oligospora ATCC
24927]
Length = 668
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 171/383 (44%), Gaps = 76/383 (19%)
Query: 11 VLP-WMRSPVDVSLFEDCPLDH--LPCLDPRLKVALQNMGISSLFPVQVAVW-----QET 62
VLP ++ P V + P + LP L L L+ +G FPVQ A+
Sbjct: 169 VLPSYLSQPTTVPTSQRPPFESFGLPEL---LLSRLEKLGFKDTFPVQSALLPLLLPDNR 225
Query: 63 IGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFA 122
+ P DL +++ TGSGKTLSY LPI+ +L NR V AL+++PT +LA QV+
Sbjct: 226 LPPSTPRSDLLVSAATGSGKTLSYLLPILASLINRIVPHTYALIIVPTHELATQVQRTAH 285
Query: 123 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 182
++A L + A+G S E +I G DIL+ATPGR
Sbjct: 286 SLAAGTSLKISTAIGTRSFEVEKDHIIANDIGSTG---------------ADILIATPGR 330
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV---LQ--LTRSDNENRFSDAS 237
L++HI FTL HL +LVVDE DRLL +++Q W+ V LQ +R D + F S
Sbjct: 331 LVEHIRNNPQFTLRHLQWLVVDEADRLLSQSFQDWVEVVGDELQKPFSREDEQGGFDITS 390
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--- 294
L + + T+R K++LSAT+T+D +LA L L P +
Sbjct: 391 MGLRTPKRAADTVR-----------------KVILSATMTRDVGRLAGLKLRRPQLIAVD 433
Query: 295 -------------TTGETR----------YKLPERLES-YKLICESKLKPLYLVALL-QS 329
GE + LP LE Y + KPL L LL S
Sbjct: 434 DIGGQEMAIDGSDNDGEDQETADKGLRELNSLPSTLEEHYYPVSNPTQKPLILAKLLSDS 493
Query: 330 LGEEKCIVFTSSVESTHRLCTLL 352
+ +VFT S ES RL LL
Sbjct: 494 QTKSGILVFTKSNESASRLARLL 516
>gi|408399225|gb|EKJ78348.1| hypothetical protein FPSE_01453 [Fusarium pseudograminearum CS3096]
Length = 906
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 168/354 (47%), Gaps = 88/354 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLFE 69
PW+ P+ VS P L L P+ L+ G F VQ A T PG
Sbjct: 334 PWLAKPLRVSQDTRTPFSELDIL-PKACRVLEEKGFRDAFAVQTAAIPLLLPTSRPG--- 389
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+C+++ TGSGKTL+YALP+ + +S + LRALVVLPTR+L Q ++ F A A
Sbjct: 390 -DVCVSAATGSGKTLAYALPVTRDISQGCLTRLRALVVLPTRELVKQAQETFELCARAFD 448
Query: 130 LS------VGLAVGQSSIADEISELIKRPKLEAGICYDPE-------------------- 163
S VG++VG S DE ++ +E + YDPE
Sbjct: 449 GSDRKRVRVGVSVGSQSFEDE-----QKAFMEQELRYDPEAYKKLQDEVQQQNQLKLGLS 503
Query: 164 --DVLQELQ-----------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
D L +L+ S +D+L+ TPGRL++H+ T GF L+++ +LVVD
Sbjct: 504 ATDSLDDLEDTDPRLSSKNGYVVDFLSKIDVLICTPGRLVEHMEQTPGFNLDYVRWLVVD 563
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E D+LL +++Q WL V++ R P+A R F D +
Sbjct: 564 EADKLLAQSFQGWLDVVMEKFRVSK-----------PTA-------------RDFPDINF 599
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETR---YKLPERLESYKL 312
+ K++LSATLT+D + L QL LH P + + G+ + + LP +L+ + +
Sbjct: 600 SGVRKIILSATLTRDLSLLNQLGLHRPQMIVLESDGDVQIAEHSLPAQLKEHSI 653
>gi|401840382|gb|EJT43223.1| DBP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 629
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 80/366 (21%)
Query: 30 DHLPCLDPRLKVALQNM---GISSLFPVQVAVWQETIGPGL----------FER---DLC 73
D+ L+P+L LQN+ ++ FP+Q ++ ++I P L F R D
Sbjct: 176 DYKNELEPKL---LQNICKNFSTNAFPIQ-SIILDSILPILNFTLNVSKRYFTRRIGDTL 231
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
+N+ TGSGKTL+Y++P+VQTLS R + LR L+V+PT+ L QV + + L V
Sbjct: 232 VNAATGSGKTLAYSIPVVQTLSRRKINRLRCLIVVPTKLLINQVHTTLTKLTQGMSLIVS 291
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
+A ++S+ DE + + LE DIL+ TPGRL+DH+N +
Sbjct: 292 IAKLENSLKDEHKKFL---NLEP-----------------DILITTPGRLVDHLNM-KSI 330
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
L++L +L++DE DRLL +++Q W P ++ ++D + F
Sbjct: 331 NLKNLKFLIIDEADRLLNQSFQGWCPKLVFHLKTDKLDTFPG------------------ 372
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL 312
++KM+ SATLT + KL L+L+ P LFL + Y+LP +L + +
Sbjct: 373 ------------NVIKMIFSATLTTNTEKLNDLNLYKPKLFLKQTDKLYQLPSKLREFNI 420
Query: 313 ---ICESKLKPLYLVALLQSL-----GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 364
+S KPL L+ + K ++F S ES+ RL LL E R +
Sbjct: 421 NVPTAKSIYKPLILLYSIDQFIAHLSDASKILIFVKSNESSIRLTKLLQLISESRSQSNI 480
Query: 365 YSGLQR 370
+ LQ
Sbjct: 481 FRNLQN 486
>gi|46108158|ref|XP_381137.1| hypothetical protein FG00961.1 [Gibberella zeae PH-1]
Length = 906
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 167/354 (47%), Gaps = 88/354 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLFE 69
PW+ P+ VS P L L P+ L+ G F VQ A T PG
Sbjct: 334 PWLAKPLRVSQDTRTPFSELDIL-PKACRVLEEKGFQDAFAVQTAAIPLLLPTSRPG--- 389
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+C+++ TGSGKTL+Y LPI + +S + LRALVVLPTR+L Q ++ F A A
Sbjct: 390 -DVCVSAATGSGKTLAYTLPITRDISQGCLTRLRALVVLPTRELVKQAQETFELCARAFD 448
Query: 130 LS------VGLAVGQSSIADEISELIKRPKLEAGICYDPE-------------------- 163
S VG++VG S DE ++ +E + YDPE
Sbjct: 449 GSDRKRVRVGVSVGSQSFEDE-----QKAFMEQELRYDPEAYKKLQDEVQQQNQLKLGLS 503
Query: 164 --DVLQELQ-----------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
D L +L+ S +D+L+ TPGRL++H+ T GF+L+++ +LVVD
Sbjct: 504 TTDSLDDLEDTDPRLSSKNGYVVDLLSKIDVLICTPGRLVEHMEQTPGFSLDYVRWLVVD 563
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E D+LL +++Q WL V++ R P+A R F D +
Sbjct: 564 EADKLLAQSFQGWLDVVMEKFRVSK-----------PTA-------------RDFPDINF 599
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGE---TRYKLPERLESYKL 312
+ K++LSATLT+D + L QL LH P + + G+ + LP +L+ + +
Sbjct: 600 SGVRKIILSATLTRDLSLLNQLGLHRPQMIVLESDGDIQIAEHSLPAQLKEHSI 653
>gi|367036024|ref|XP_003667294.1| hypothetical protein MYCTH_2312967 [Myceliophthora thermophila ATCC
42464]
gi|347014567|gb|AEO62049.1| hypothetical protein MYCTH_2312967 [Myceliophthora thermophila ATCC
42464]
Length = 858
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 169/362 (46%), Gaps = 76/362 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ SPV V+ P L + P L++ G F VQ AV + + D+
Sbjct: 256 PWLASPVRVAPDVTRPFVEL-GISPESSKILESKGFKDAFAVQTAVLPLLLPSPDRQGDV 314
Query: 73 CINSPTGSGKTLSYALPIVQTLS-NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
+ +PTGSGKTLSY LP+V +S +RA R LRAL+VLPTRDL QV+ A A +S
Sbjct: 315 VVAAPTGSGKTLSYVLPMVHDISKDRATR-LRALIVLPTRDLVQQVQLACEACTTAFAIS 373
Query: 132 ------VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ--------------- 170
VG A+G +E S ++ + YDP+ Q LQ
Sbjct: 374 GGKKVKVGTAMGNRVFKEEQSIIVGEEQR-----YDPQGYQQYLQKQNRLVSLEDSDDED 428
Query: 171 -------------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
S VDIL+ TPGRL++HI T GF+L+++ +L+VDE D+LL
Sbjct: 429 DGLDLERTEPLPYHVVAHESKVDILICTPGRLVEHITKTPGFSLDYVRWLIVDEADKLLA 488
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ +Q WL TV + ++ + G R F + K++
Sbjct: 489 QDFQQWLDTVTEKL-----------------------SVEKPGA-RDFPSSNKSGVRKVI 524
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERL-ESYKLICESKLKPLYLVALL 327
LSAT+T+D + L L L P + T+ LP L ES I E LKPLYLV LL
Sbjct: 525 LSATMTRDLSLLNGLKLSRPRLVVVEGTKAGEQNLPPLLRESAIKIREPSLKPLYLVDLL 584
Query: 328 QS 329
+S
Sbjct: 585 RS 586
>gi|365758567|gb|EHN00402.1| Dbp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 532
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 80/366 (21%)
Query: 30 DHLPCLDPRLKVALQNM---GISSLFPVQVAVWQETIGPGL----------FER---DLC 73
D+ L+P+L LQN+ ++ FP+Q ++ ++I P L F R D
Sbjct: 176 DYKNELEPKL---LQNICKNFSTNAFPIQ-SIILDSILPILNFTLNVSKRNFTRRIGDTL 231
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
+N+ TGSGKTL+Y++P+VQTLS R + LR L+V+PT+ L QV + + L V
Sbjct: 232 VNAATGSGKTLAYSIPVVQTLSRRKINRLRCLIVVPTKLLINQVHTTLTKLTQGMSLIVS 291
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
+A ++S+ DE + + LE DIL+ TPGRL+DH+N +
Sbjct: 292 IAKLENSLKDEHKKFL---NLEP-----------------DILITTPGRLVDHLNM-KSI 330
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
L++L +L++DE DRLL +++Q W P ++ ++D + F
Sbjct: 331 NLKNLKFLIIDEADRLLNQSFQGWCPKLVFHLKTDKLDTFPG------------------ 372
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL 312
++KM+ SATLT + KL L+L+ P LFL + Y+LP +L + +
Sbjct: 373 ------------NVIKMIFSATLTTNTEKLNDLNLYKPKLFLKQTDKLYQLPSKLREFNI 420
Query: 313 ---ICESKLKPLYLVALLQSL-----GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 364
+S KPL L+ + K ++F S ES+ RL LL E R +
Sbjct: 421 NVPTAKSIYKPLILLYSIDQFIAHLSDASKILIFVKSNESSIRLTKLLQLISESRSQSNI 480
Query: 365 YSGLQR 370
+ LQ
Sbjct: 481 FRNLQN 486
>gi|255957139|ref|XP_002569322.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591033|emb|CAP97252.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 155/324 (47%), Gaps = 63/324 (19%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQETIGPGL 67
PW+ +P+ S + L + P L L+ F VQ V E PG
Sbjct: 218 PWLANPLRKSAQDTKKFSEL-GIKPDLLKILEQQNYKEAFAVQSTVIPLLLQGEQNHPG- 275
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
DLC+++ TGSGKTLSY LP+V L R LR L+V+PTR+L Q ++ A
Sbjct: 276 ---DLCVSAATGSGKTLSYVLPLVTALPPRPASRLRGLIVVPTRELVKQARESCELCASG 332
Query: 128 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP--------------------EDVLQ 167
L +G AVG +I DE L++ ++ Y+P ED +
Sbjct: 333 SRLHIGSAVGNVAIKDEQKLLMRVDQV-----YNPAIQQQQRDGLKGNDWMNLSLEDCVN 387
Query: 168 EL--------------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
E + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DRLL E+
Sbjct: 388 EAIDSSGSLPGHIQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRLLNES 447
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q W+ V+ ++ N TF P K + G+ KP PR K++LS
Sbjct: 448 FQEWVDVVM-----NSLNSREAPETFGPGG----KLLSELGL--SIDAKP-PR--KVILS 493
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTG 297
AT+T+D +KL L L +P + G
Sbjct: 494 ATMTRDISKLNSLRLANPKMVIIG 517
>gi|391327051|ref|XP_003738021.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Metaseiulus
occidentalis]
Length = 429
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 35/319 (10%)
Query: 54 VQVAVWQETIGP-----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+Q V +E + P GL RD+C+ +PTGSGKTL+Y LP+++ L + +RA+++L
Sbjct: 1 MQKQVIRELLDPRYDIMGLPPRDICVAAPTGSGKTLAYVLPLIKLLKGLFEKAIRAVILL 60
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PT +LA QV DVF A LS L G S ++E+ L++R
Sbjct: 61 PTSELAKQVYDVFTRYAAPFQLSAALLTGLKSHSEEVKTLLERG---------------- 104
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
VD+++ATP ++H+ T GF L + +LV+DE DR++ + V +
Sbjct: 105 -HPIVDVVIATPKTFLNHLRLTPGFNLRLVSHLVLDEADRMVDMVIHGLIREV------E 157
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
N D++ S G+ + R + D L K++ SATL DP KL ++L
Sbjct: 158 NAIYVDDSARCRCSEIGNFERSRPTAISCCTMDAHSLPLRKLLYSATLMSDPEKLRHVNL 217
Query: 289 HHP-LFLTTGE------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
+P +F E + LP+ LE K+ C+ ++PL + L + IVF S
Sbjct: 218 FYPRVFHAKAEHANRSDKAFALPDSLEERKIFCDIDVRPLLVWWLFVHQKMGRMIVFARS 277
Query: 342 VESTHRLCTLLNHFGELRI 360
E HRL ++ G ++
Sbjct: 278 REECHRLRIVIEFMGSCKV 296
>gi|396489645|ref|XP_003843156.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
gi|312219734|emb|CBX99677.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
Length = 705
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 168/359 (46%), Gaps = 54/359 (15%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ PV V ++ P L ++P LQ G + VQ A+ + PG FE+
Sbjct: 145 PWLAKPVTVEATKNVPFSEL-GIEPFFVKKLQKQGFNDALAVQTALL-PMLHPG-FEQHL 201
Query: 71 -DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+C+++ TGSGKTL+Y LPI++ L +R V L A++V+P+R L Q V +
Sbjct: 202 GDICVSAKTGSGKTLAYLLPIIEALKDRVVPVLSAVIVVPSRQLVNQALQVAEELCAGTK 261
Query: 130 LSVGLAVGQSSIADEISELIK-RPKL---------------------EAGICYD-----P 162
+ VG A+G + E +L+K R + E G +D P
Sbjct: 262 IKVGTALGNVAFPTEQKQLVKLRAQYDPHRTRELHERASRQFQIGFAEKGGIFDDLKSMP 321
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
D + + S VDIL+ TPGRL++HI T GF L + +LV+DE D+LL + +Q W ++
Sbjct: 322 LDHVPQYDSGVDILICTPGRLVEHIENTTGFLLNAVQWLVIDEADQLLNQNFQGWAGVLM 381
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPN 281
+ + F +A ++ R + P R L K+VLSAT+ +D
Sbjct: 382 EALHGETPPDFMNAQE-------RIRMRERDANSKWSVALPARRQLTKVVLSATMEKDLT 434
Query: 282 KLAQLDLHHPLF------------LTTGETRYKLPERLESYKL-ICESKLKPLYLVALL 327
KL L L P L + ++LP L+ + + + KPL+L+ +L
Sbjct: 435 KLGTLKLKRPKLVVVQDEATEIQPLDHEDNVFELPSTLDEVAVHVGDGSNKPLHLLYIL 493
>gi|425780841|gb|EKV18837.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
gi|425783078|gb|EKV20947.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
Length = 809
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 156/323 (48%), Gaps = 63/323 (19%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQETIGPGLF 68
W+ +P+ S+ + L LK+ L+ F VQ V + PG
Sbjct: 219 WLANPLRKSVQDTRKFSELGIKSDLLKI-LEQQNYKQAFAVQSTVIPLLLQGDRNHPG-- 275
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
DLCI++ TGSGKTLSY LP+V L R+ LR L+V+PTR+L Q ++ A
Sbjct: 276 --DLCISAATGSGKTLSYVLPLVTALPPRSASRLRGLIVVPTRELVKQARESCELCASGS 333
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDP--------------------EDVLQE 168
L +G AVG +I DE L++ ++ Y+P ED + E
Sbjct: 334 RLHIGSAVGNVAIKDEQKLLMRMDQV-----YNPAIQQQQRDGLNGNDWMNLSLEDCISE 388
Query: 169 L--------------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
+ VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DRLL E++
Sbjct: 389 AIGSNGSLPGHIQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRLLNESF 448
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
Q W+ V+ ++ N TF P K + G+ KP PR K++LSA
Sbjct: 449 QEWVDVVM-----NSLNSREAPETFGPGG----KVLSELGL--SIDAKP-PR--KVILSA 494
Query: 275 TLTQDPNKLAQLDLHHPLFLTTG 297
T+T+D +KL L L +P + G
Sbjct: 495 TMTRDISKLNSLRLVNPKMVIIG 517
>gi|451845363|gb|EMD58676.1| hypothetical protein COCSADRAFT_265142 [Cochliobolus sativus
ND90Pr]
Length = 706
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 61/361 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGPG 66
W+ P + + P L +D L+ G VQ A+ + + +G
Sbjct: 143 WLAQPTTIEASKTAPFSEL-GVDATYVKKLEKQGFKDALAVQTALLPMLHLGFDQHLG-- 199
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
D+C+++ TGSGKTL+Y LPI++ L +R V L A++V+P+R L Q V +
Sbjct: 200 ----DICVSAKTGSGKTLAYLLPIIEALKDRTVPILSAIIVVPSRQLVNQALQVAEELCA 255
Query: 127 AVGLSVGLAVGQSSIADEISELIK-----RPK-----------------LEAGICYD--- 161
+ VG A+G + A E +L+K PK +E+G Y+
Sbjct: 256 GTRIKVGTALGNVAFATEQKQLVKMRSQYDPKRAQELNEQASQQHQTGLMESGGLYEDLR 315
Query: 162 --PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
P + + S VDIL+ TPGRL++HI T GF L +L +LV+DE D+LL + +Q W
Sbjct: 316 NMPLGHVPKYDSGVDILICTPGRLVEHIEHTTGFLLNNLRWLVIDEADQLLNQNFQGWAS 375
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
++ + F +A + + + P ++ K+VLSAT+ +D
Sbjct: 376 VLMNAIHCETPCEFMNARERMAKQLRDANSAWSVAL-------PQRQVTKVVLSATMEKD 428
Query: 280 PNKLAQLDLHHPLF------------LTTGETRYKLPERLESYKL-ICESKLKPLYLVAL 326
+KL L L P L T + ++LP +LE + + + + KPL+L+ +
Sbjct: 429 LSKLGTLKLRRPKLVVVQDASTEPQPLETEDNVFELPSKLEEFAVHVGDGANKPLHLLYV 488
Query: 327 L 327
L
Sbjct: 489 L 489
>gi|403215284|emb|CCK69783.1| hypothetical protein KNAG_0D00300 [Kazachstania naganishii CBS
8797]
Length = 637
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 171/338 (50%), Gaps = 80/338 (23%)
Query: 52 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 98
FP+Q A+ +TI P + F R D+ +N+ TGSGKTLSY +P+VQTLS+R
Sbjct: 210 FPIQTAIL-DTILPTINTTYKITKRNFTRRVGDVLVNAATGSGKTLSYTIPLVQTLSSRT 268
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
V LRAL+++PT+ L QV D + + V + ++S+ +E +LI
Sbjct: 269 VNRLRALILVPTKPLIHQVYDTLTKLIKGTNIIVSFSKLENSLREEHQKLI--------- 319
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
S DIL+ TPGRL+DHIN + +L +L +LV+DE DRLL +++Q W
Sbjct: 320 -----------NSEPDILIVTPGRLVDHINL-KSISLRNLKFLVLDEADRLLNQSFQNWC 367
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLT 277
++Q ++ +N P P ++KMV SATLT
Sbjct: 368 HELMQQLDTEKQNV-----------------------------DPMPGNVIKMVFSATLT 398
Query: 278 QDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQ----S 329
+ KL L L++P LF+T Y LP L+ Y + +S KPL+L+ LLQ +
Sbjct: 399 TNTAKLHDLKLYNPRLFVTDSVKLYNLPPTLQEYNIHIPTAKSLYKPLFLLRLLQLKTTT 458
Query: 330 LGEE----KCIVFTSSVESTHRLCTL---LNHFGELRI 360
GEE K +VF S +++ RL +L LN G++ +
Sbjct: 459 EGEEKQRAKVLVFVKSNQNSLRLASLLQILNKEGDMTV 496
>gi|186703632|emb|CAQ43244.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 628
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 67/334 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI----------GPGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 188 LQPRLLANIQQFFSKDTFPIQTVLLDNTLPLLNFTLGVSKKNLTRRIGDILVNASTGSGK 247
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PI++ LS R V LRALV++PT+ L QV D + +A GL + ++ ++S+
Sbjct: 248 TLAYSIPIIEALSKRTVNKLRALVIVPTKLLIGQVFDTMSKLAQGTGLIISISKLENSLK 307
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E + I Y+P DIL+ TPGRL+DH+ +++L LV
Sbjct: 308 EEHQKFIN---------YEP-----------DILIVTPGRLVDHLQIG-SINMKNLMMLV 346
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE D LL +++Q W ++ RS ++ +P
Sbjct: 347 LDEADHLLNQSFQNWSAELMNNIRSQKLDQ-------MPG-------------------- 379
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L L++P LF+ Y LP++L+ Y + +S
Sbjct: 380 ---NVIKMVFSATLTTNTEKLHGLHLYNPKLFVKDSVKLYNLPDKLQEYNINVPTAKSIY 436
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
KPL+L+ LL L K +VF S E++ RL LL
Sbjct: 437 KPLFLLHLLDKLHNAKILVFVKSNEASLRLAPLL 470
>gi|366987443|ref|XP_003673488.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
gi|342299351|emb|CCC67105.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
Length = 649
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 169/336 (50%), Gaps = 67/336 (19%)
Query: 34 CLDPRLKVALQNMGISSLFPVQ---------VAVWQETIGPGLFER---DLCINSPTGSG 81
L+P+L + + FP+Q V + + I F R D+ +N+ TGSG
Sbjct: 187 SLEPKLLNNITKYFSNDTFPIQTILLDTLLPVLNFSQRITKKNFTRRVGDILVNASTGSG 246
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KTL+Y++PIVQTLS R+V LRAL+++PT+ L QV D + ++ L + ++ +SS+
Sbjct: 247 KTLAYSIPIVQTLSKRSVNKLRALIIVPTKLLIHQVYDTLSKLSQGTSLIISISKLESSL 306
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+E + LQ L+ D+L+ TPGRL+DH+N +L++L L
Sbjct: 307 KEEHQK------------------LQNLEP--DVLIITPGRLVDHLNMG-SISLKNLKML 345
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DRLL +++Q W ++ ++D ++ +P
Sbjct: 346 VLDEADRLLNQSFQNWCFELMNRLKTDKLDQ-------MPG------------------- 379
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESK 317
++KMV SATLT + KL L+L+ P LF+ Y LP L+ + + +S
Sbjct: 380 ----NVIKMVFSATLTTNTQKLHDLNLYSPKLFVMDSVKLYHLPAMLQEFNINIPTAKSL 435
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
KPL L+ LL+ + +VF S E++ RL TLLN
Sbjct: 436 YKPLLLLRLLKEQSTARILVFAKSNEASLRLATLLN 471
>gi|50310747|ref|XP_455395.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660305|sp|Q6CKZ4.1|DBP6_KLULA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49644531|emb|CAG98103.1| KLLA0F06941p [Kluyveromyces lactis]
Length = 630
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 72/340 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
LD RL + + S FP+Q ++ + + LF R D+ +N+ TGSGK
Sbjct: 182 LDARLLKNITSNFSSETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSGK 241
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++P+VQ L +R V +RA++++PT+ L QV D + ++ L+V ++ ++S+
Sbjct: 242 TLAYSVPLVQILRSRTVNKVRAIILVPTKILIHQVYDCLSKLSQGTSLNVSMSKLENSLK 301
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E ++ L ++ DIL+ TPGRL+DH+ F L+ L +LV
Sbjct: 302 EEHNKF--------------------LYNSPDILIITPGRLVDHLQM-ESFDLKTLKFLV 340
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL +++Q W + +D ++ +R G
Sbjct: 341 LDEADRLLNQSFQNWNQVLFHHLTNDKQD-------------------KRPG-------- 373
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L LH+P +FLT Y +P++L+ + +S
Sbjct: 374 ---NVIKMVFSATLTTNAEKLYNLYLHNPKIFLTDSVKLYSIPKKLQELNVNIPTAKSLF 430
Query: 319 KPLYLVALLQSLGEE-----KCIVFTSSVESTHRLCTLLN 353
KPL L+ ++ + K +VF S E++ RL +LL+
Sbjct: 431 KPLLLLRIIHDIKSSASRNAKILVFVKSNEASIRLESLLH 470
>gi|339236557|ref|XP_003379833.1| DEAD-box ATP-dependent RNA helicase 1 [Trichinella spiralis]
gi|316977464|gb|EFV60560.1| DEAD-box ATP-dependent RNA helicase 1 [Trichinella spiralis]
Length = 570
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 198/420 (47%), Gaps = 86/420 (20%)
Query: 1 MEEAKKKSMP-----VLP-WMRSPVDVS---LFEDCPLDHLPCLDPR-LKVALQNMGISS 50
+E ++K+ P VLP W+RS VS + + PLD + P+ LK AL I +
Sbjct: 8 LESHQQKAQPGDPSTVLPEWIRSAEIVSRNIVDDQIPLDKINEEIPQFLKDALLENSIKT 67
Query: 51 LFPVQVAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
LFP+Q AV W P D+CI+SPTGSGKTL Y LPI+ L +R + +
Sbjct: 68 LFPIQGAVLPFFINCTWSVEPPP-----DICISSPTGSGKTLCYVLPIIYALRDRPMPRI 122
Query: 103 RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
RALV++PT +L QV VF+ A L V G+ S+ + +++ + G+C
Sbjct: 123 RALVIVPTAELVDQVYQVFSQFAKYAKLKVVSISGEKSLKRDYNKIYE--TTPGGLC--- 177
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATR--GFTLEHLCYLVVDETDRLLREAYQAWLPT 220
+ D+L++TPGRL++H+ F L++L +LV DE D LLR+ Y A L
Sbjct: 178 --------ATCDVLISTPGRLLEHLFGPHRSSFNLQYLRFLVFDEADFLLRDDYYALLLK 229
Query: 221 VLQLTRSDNENRF--SDASTFLPSA--------FGSLKTIR-----------RCG--VER 257
S E + +D ST A F +L + + RC V+R
Sbjct: 230 ASGYRNSIEETVYCSNDDSTTCCDAMALDRNFEFYNLTSDKHFPATTRMISSRCDYHVKR 289
Query: 258 -------GFKDKPYPRLV---KMVLSATLTQDPNKLAQLDLHHPLFLTTGET----RYKL 303
KD +P V K++LSATL Q L+++ L P+ + + +Y L
Sbjct: 290 IPLNSRIRLKDYLHPHYVPLQKILLSATLAQSSEILSRIQLFRPVMYKSENSDTVQQYTL 349
Query: 304 -----------PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
P LE Y + C+ ++KPL + +LL+ + + FT + +HRL LL
Sbjct: 350 NENIPTNEIVFPTNLEEYFVECDLQVKPLIVCSLLKQFDCMQILCFTETRRHSHRLAVLL 409
>gi|254580363|ref|XP_002496167.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
gi|186703847|emb|CAQ43534.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
gi|238939058|emb|CAR27234.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
Length = 624
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 67/334 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI----------GPGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 188 LQPRLLANIQQFFSKDTFPIQTVLLDNTLPLLNFTLGVSKKNLTRRIGDILVNASTGSGK 247
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PI++ LS R V LRALV++PT+ L QV D + +A GL + ++ ++S+
Sbjct: 248 TLAYSIPIIEALSKRTVNKLRALVIVPTKLLIGQVFDTMSKLAQGTGLIISISKLENSLK 307
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E + I Y+P DIL+ TPGRL+DH+ +++L LV
Sbjct: 308 EEHQKFIN---------YEP-----------DILIVTPGRLVDHLQIG-SINMKNLMMLV 346
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE D LL +++Q W ++ RS ++ +P
Sbjct: 347 LDEADHLLNQSFQNWSAELMNNIRSHKLDQ-------MPG-------------------- 379
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L L++P LF+ Y LP++L+ Y + +S
Sbjct: 380 ---NVIKMVFSATLTTNTEKLHGLHLYNPKLFVRDSVKLYNLPDKLQEYNINVPTAKSIY 436
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
KPL+L+ LL L K +VF S E++ RL LL
Sbjct: 437 KPLFLLHLLDKLHNAKILVFVKSNEASLRLAPLL 470
>gi|358365431|dbj|GAA82053.1| DEAD/DEAH box helicase [Aspergillus kawachii IFO 4308]
Length = 861
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 155/317 (48%), Gaps = 48/317 (15%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERD 71
PW+ +P+ S E L +D L L++ G F VQ V + GP D
Sbjct: 240 PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYHEAFAVQSTVIPLLLQGPTNHPGD 298
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A GL
Sbjct: 299 LCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGLR 358
Query: 132 VGLAVGQSSIADEISELIKRP--------KLEAGI--------CYDPEDVLQEL------ 169
V AVG +I DE L++ KL + ++ +D + E
Sbjct: 359 VASAVGNVAIKDEQRSLMRVDQVYGPATFKLRQNVQLTGDDWTNFNLQDYISEAGDLSES 418
Query: 170 --------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+ VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE DRLL E++Q W+ V
Sbjct: 419 LPGYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLDWLVIDEADRLLNESFQEWVDVV 478
Query: 222 LQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
+ S + P AFG S + G+ K+ PR K+VLSAT+T+D
Sbjct: 479 MT----------SLDARKAPGAFGFSGNFLSELGLPIQSKE---PR--KIVLSATMTRDV 523
Query: 281 NKLAQLDLHHPLFLTTG 297
KL L L +P + G
Sbjct: 524 TKLNSLRLANPKLVVIG 540
>gi|186703621|emb|CAQ43234.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 609
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 163/334 (48%), Gaps = 67/334 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIG----------PGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 173 LQPRLLANIQQYFSKDTFPIQTVLLDNTLSLLNFTLGVTKKNLTRRVGDILVNASTGSGK 232
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PI++ LS R V LR LV++PT+ L QV D + +A GL + ++ ++S+
Sbjct: 233 TLAYSIPIIEALSKRTVNKLRVLVIVPTKLLIGQVFDTMSKLAQGTGLIISISKLENSLK 292
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E + + Y+P DIL+ TPGRL+DH+ T+++L LV
Sbjct: 293 EEHQKFMN---------YEP-----------DILIVTPGRLVDHLQIG-SITMKNLMMLV 331
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE D LL +++Q W ST L + S K + G
Sbjct: 332 LDEADHLLNQSFQNW-------------------STELMNNIKSHKLDQMPG-------- 364
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L L++P LF+ Y LP++L+ Y + +S
Sbjct: 365 ---NVIKMVFSATLTTNTEKLHGLHLYNPKLFVRDSVKLYNLPDKLQEYNVNVPTAKSLY 421
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
KPL+L+ LL L K +VF S E++ RL LL
Sbjct: 422 KPLFLLHLLNRLQNAKALVFVKSNEASLRLAPLL 455
>gi|317025605|ref|XP_001389412.2| ATP-dependent RNA helicase dbp6 [Aspergillus niger CBS 513.88]
Length = 861
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 154/317 (48%), Gaps = 48/317 (15%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERD 71
PW+ +P+ S E L +D L L++ G F VQ V + GP D
Sbjct: 239 PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGD 297
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A GL
Sbjct: 298 LCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGLR 357
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICY-----------------------DPEDVLQE 168
V AVG +I DE L++ ++ + D D+ +
Sbjct: 358 VASAVGNVAIKDEQRSLMRVDQVYGPATFKLRQNVQLTGDDWTNFNLQDYISDAGDLSES 417
Query: 169 L-------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
L + VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE DRLL E++Q W+ V
Sbjct: 418 LPGYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEADRLLNESFQEWVDVV 477
Query: 222 LQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
+ S + P AFG S + G+ K+ PR K+VLSAT+T+D
Sbjct: 478 M----------TSLDARKAPDAFGFSGNFLSGLGLPIQSKE---PR--KVVLSATMTRDV 522
Query: 281 NKLAQLDLHHPLFLTTG 297
KL L L +P + G
Sbjct: 523 TKLNSLRLANPKLVVIG 539
>gi|350638465|gb|EHA26821.1| hypothetical protein ASPNIDRAFT_35758 [Aspergillus niger ATCC 1015]
Length = 861
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 154/317 (48%), Gaps = 48/317 (15%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERD 71
PW+ +P+ S E L +D L L++ G F VQ V + GP D
Sbjct: 239 PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGD 297
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
LCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A GL
Sbjct: 298 LCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGLR 357
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICY-----------------------DPEDVLQE 168
V AVG +I DE L++ ++ + D D+ +
Sbjct: 358 VASAVGNVAIKDEQRSLMRVDQVYGPATFKLRQNVQLTGDDWTNFNLQDYISDAGDLSES 417
Query: 169 L-------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
L + VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE DRLL E++Q W+ V
Sbjct: 418 LPGYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEADRLLNESFQEWVDVV 477
Query: 222 LQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
+ S + P AFG S + G+ K+ PR K+VLSAT+T+D
Sbjct: 478 M----------TSLDARKAPDAFGFSGNFLSGLGLPIQSKE---PR--KVVLSATMTRDV 522
Query: 281 NKLAQLDLHHPLFLTTG 297
KL L L +P + G
Sbjct: 523 TKLNSLRLANPKLVVIG 539
>gi|313220373|emb|CBY31228.1| unnamed protein product [Oikopleura dioica]
Length = 521
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 171/361 (47%), Gaps = 71/361 (19%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV 58
+ KK+ P W P +D PL+ L LD + L+ M +S+FPVQ A+
Sbjct: 104 QKKKRIAASFPRWCEKPEVIDGDFTNLPPLEELHEFLDDTIYKNLEAMNFTSVFPVQRAI 163
Query: 59 WQETI--GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
E + GP RDL + +PTGSGKT+++ +PIVQ L +RA+ +RAL+VLPTR+LA Q
Sbjct: 164 IPELLRRGP---PRDLAVQAPTGSGKTITFLVPIVQKLMHRAIPSIRALIVLPTRELAKQ 220
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V DV + L+ L VG +++ + ++L + + E + DI+
Sbjct: 221 VNDVLLELIKGTKLASHLLVGATTLDQDCNKLT-------------QTIGGEKYATCDII 267
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRLMDH+ G L L +LVVDE DR+ AWL + Q T NR
Sbjct: 268 VATPGRLMDHLE--NGLDLSRLRFLVVDEADRM----RGAWLEKLEQKT-----NR---- 312
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
L K++ SATL DP L+ L L P T+
Sbjct: 313 ----------------------------ALLQKLLFSATLASDPQFLSSLKLRFPKLYTS 344
Query: 297 GETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
G T+ L E + Y + E KP + +L++ + + ++F +S ES L LL
Sbjct: 345 GWTQPAGLTEEMIRYGRLDE---KPRIIRSLIKD--DTRALIFVNSNESAVALDDLLKKS 399
Query: 356 G 356
G
Sbjct: 400 G 400
>gi|336467903|gb|EGO56066.1| hypothetical protein NEUTE1DRAFT_83030 [Neurospora tetrasperma FGSC
2508]
gi|350289862|gb|EGZ71087.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 684
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 165/344 (47%), Gaps = 46/344 (13%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ +P+ V+ P L K+ L G F VQ A + + D+
Sbjct: 203 PWLANPIRVTTETRKPFTELGISVEAAKI-LAIKGFKDAFAVQTAALPLLLPNPDLQGDV 261
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ +PTGSGKTL+Y LP+VQ ++ LR ++VLPTRDL QV+ A A A S
Sbjct: 262 VVAAPTGSGKTLAYVLPMVQDIALSQTTKLRGVIVLPTRDLVQQVQQACEACAAAFAGSS 321
Query: 133 G---LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
G + VG + E RP P V+Q + VDIL+ TPGRL++HI
Sbjct: 322 GGKRVKVGTAMGNRPFKEEQGRPL--------PYHVIQHVPK-VDILICTPGRLVEHITK 372
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GFTL+++ +LVVDE D+LL + +Q WL V NE L
Sbjct: 373 TKGFTLDYVRWLVVDEADKLLAQDFQQWLDVV-------NEK---------------LAV 410
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKL--PER 306
+ + +K PR K++LSAT+T+D L L L P L + G L P
Sbjct: 411 SKPGARDFAANNKTGPR--KVILSATMTRDITLLNGLKLSRPKLVVLEGAKAGDLAIPAT 468
Query: 307 LESYKL-ICESKLKPLYLVALLQS-----LGEEKCIVFTSSVES 344
L+ Y + I E LKPLYLV LLQS ++FT+S +S
Sbjct: 469 LKEYAIKITEPSLKPLYLVDLLQSKYMAAAFPTTALIFTASNQS 512
>gi|313234211|emb|CBY10279.1| unnamed protein product [Oikopleura dioica]
Length = 521
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 171/361 (47%), Gaps = 71/361 (19%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV 58
+ KK+ P W P +D PL+ L LD + L+ M +S+FPVQ A+
Sbjct: 104 QKKKRIAASFPRWCEKPEVIDGDFTNLPPLEELHEFLDDTIYKNLEAMNFTSVFPVQRAI 163
Query: 59 WQETI--GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
E + GP RDL + +PTGSGKT+++ +PIVQ L +RA+ +RAL+VLPTR+LA Q
Sbjct: 164 IPELLRRGP---PRDLAVQAPTGSGKTITFLVPIVQKLMHRAIPSIRALIVLPTRELAKQ 220
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V DV + L+ L VG +++ + ++L + + E + DI+
Sbjct: 221 VNDVLLELIKGTKLASHLLVGATTLDQDCNKLT-------------QTIGGEKYATCDII 267
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRLMDH+ G L L +LVVDE DR+ AWL + Q T NR
Sbjct: 268 VATPGRLMDHLE--NGLDLSRLRFLVVDEADRM----RGAWLEKLEQKT-----NR---- 312
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
L K++ SATL DP L+ L L P T+
Sbjct: 313 ----------------------------ALLQKLLFSATLASDPQFLSSLKLRFPKLYTS 344
Query: 297 GETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
G T+ L E + Y + E KP + +L++ + + ++F +S ES L LL
Sbjct: 345 GWTQPAGLTEEMIRYGRLDE---KPRIIRSLIKD--DTRALIFVNSNESAVALDDLLKKS 399
Query: 356 G 356
G
Sbjct: 400 G 400
>gi|255710965|ref|XP_002551766.1| KLTH0A07084p [Lachancea thermotolerans]
gi|238933143|emb|CAR21324.1| KLTH0A07084p [Lachancea thermotolerans CBS 6340]
Length = 628
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 164/320 (51%), Gaps = 71/320 (22%)
Query: 52 FPVQVAV---------WQETIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FPVQ + + +++ F R D+ +N+ TGSGKTL+Y++P+VQ LS R V
Sbjct: 200 FPVQTVILDTVVPKMNFAQSVNKKSFPRRVGDILVNASTGSGKTLAYSIPVVQCLSKRTV 259
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
LR L+V+PT+ L QV + ++ L G++ ++S+ +E K +A
Sbjct: 260 NRLRCLIVVPTKILIHQVFETLVKLSQGTSLITGISKLENSLREE------HRKFQAQ-- 311
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
+P DILV TPGRL+DH+ F+L++L +L++DE DRLL +++Q W
Sbjct: 312 -EP-----------DILVITPGRLVDHLQLN-TFSLKNLKFLILDEADRLLNQSFQNWCS 358
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLTQ 278
+++ ++D K++ +P ++KMV SATLT
Sbjct: 359 VIMERLKTD-------------------------------KEEMHPVSVIKMVFSATLTT 387
Query: 279 DPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLG--E 332
+ KL L L+ P LF+ Y LP++L+ + + +S KPL+ + L+ +L +
Sbjct: 388 NTEKLHGLQLNRPSLFMMDSVKLYHLPKQLQEFNIKIPTAKSFAKPLFALQLIAALSPTD 447
Query: 333 EKCIVFTSSVESTHRLCTLL 352
+ +VF S E++ RL TLL
Sbjct: 448 PRILVFVRSNEASIRLATLL 467
>gi|195171938|ref|XP_002026759.1| GL13223 [Drosophila persimilis]
gi|194111693|gb|EDW33736.1| GL13223 [Drosophila persimilis]
Length = 348
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 131/234 (55%), Gaps = 35/234 (14%)
Query: 5 KKKSMPVLP-WMRSPVDV---SLFED---------CPLDHLPCLDPRLKVALQNMGISSL 51
+KK VLP W+ P + SL D +++L L + AL+ M I L
Sbjct: 106 RKKVTEVLPPWLAYPTIIEGGSLLPDDDLEAGKDEASIENLSYLKDHTRQALKQMKIKRL 165
Query: 52 FPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRA 104
FPVQ V W Q P L RD+C+++PTGSGKTL++A+PIVQ L+NR VRC +RA
Sbjct: 166 FPVQRTVIPWILEAQGQPAP-LRPRDICVSAPTGSGKTLAFAIPIVQLLNNR-VRCKVRA 223
Query: 105 LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 164
LVVLP +LALQV V A+ L V L Q + DE +L+ ++ G Y
Sbjct: 224 LVVLPVAELALQVFKVIRALCSKTELEVCLLSKQHRLEDEQEKLV---EVYKGQIY---- 276
Query: 165 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q L
Sbjct: 277 ------SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAFFQKRL 324
>gi|169598424|ref|XP_001792635.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
gi|111069109|gb|EAT90229.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
Length = 648
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 185/418 (44%), Gaps = 98/418 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGP 65
PW+ P V P L +D L++ G VQ A+ +++ +G
Sbjct: 140 PWLAQPTTVESSRTVPFAEL-GVDAHYLKKLESQGFKDALAVQTALLPMLHQGFEQHLG- 197
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQV-KDVF 121
D+C+++ TGSGKTL+Y LPI++ L +RAV L A+VV+P+R L ALQV +D+
Sbjct: 198 -----DICVSAKTGSGKTLAYLLPIIEALKDRAVPTLSAIVVVPSRQLVNQALQVAEDLC 252
Query: 122 AAIAPAVGLSVG--------------------LAVGQSSIADEISELIKRPKLEAGICYD 161
A VG ++G A G + + S+ + +E G D
Sbjct: 253 AGTKIKVGTALGNTAFPPDAEAAGQVEGSVPPHAAGAKDLHERASQQFRTGFVEKGGILD 312
Query: 162 -----PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
P+D + + S VDIL+ TPGRL++HI T GF L + +LV+DE D+LL + +Q
Sbjct: 313 DLMNMPQDHIPQYDSGVDILICTPGRLVEHIEHTTGFLLNSVRWLVIDEADQLLNQNFQG 372
Query: 217 WLPTVLQLTRSDNENRFSDASTFL-------PSAFGSLKTIRRCGVERGFKDKPYPRLVK 269
W ++ + F +A L S + ++ RR +L K
Sbjct: 373 WASVLMDALHGETPVDFMNAQERLLKRERDANSMWSAILPARR-------------QLTK 419
Query: 270 MVLSATLTQDPNKLAQLDLHHPLF------------LTTGETRYKLPERLESYKL-ICES 316
+VLSAT+ +D KL L L P L + ++LP L+ + + + +
Sbjct: 420 IVLSATMEKDLTKLGTLRLKRPKLVVVQDEATEVQPLDHEDNNFELPSTLDEFSVHVADG 479
Query: 317 KLKPLYLVALLQSL-------GEE---------------KCIVFTSSVESTHRLCTLL 352
KPL+L+ +L + GE + +VFT S E+ RL LL
Sbjct: 480 SNKPLHLLYVLLNYVFTGIETGENNEDEDSETGVAEHPSRVLVFTKSTENASRLSHLL 537
>gi|330916967|ref|XP_003297627.1| hypothetical protein PTT_08099 [Pyrenophora teres f. teres 0-1]
gi|311329592|gb|EFQ94284.1| hypothetical protein PTT_08099 [Pyrenophora teres f. teres 0-1]
Length = 704
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 82/372 (22%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGPG 66
W+ P V + P L +DP LQ G VQ A+ +++ +G
Sbjct: 148 WLAQPTTVEASKTVPFSEL-GVDPFFAKTLQKQGFKHALAVQTALLPMLRAGFEQHLG-- 204
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
D+C+++ TGSGKTL+Y LPI++ L +R V L A+VV+P+R L Q V +
Sbjct: 205 ----DICVSAKTGSGKTLAYLLPIIEQLKDRTVPVLSAIVVVPSRQLVNQALQVAEELCA 260
Query: 127 AVGLSVGLAVGQSSIADEISELIK-RPKLE----------------------AGICYD-- 161
+ VG A+G + A E +LIK RP+ + G+ D
Sbjct: 261 GTKIKVGTALGNVAFATEQKQLIKLRPQYDPRRARELNEKASRQYQTGSTKKGGLYEDLK 320
Query: 162 --PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW-- 217
P D + + S VDIL+ TPGRL++HI T GF L + +LV+DE D+LL + +Q W
Sbjct: 321 SMPLDHVPQYDSNVDILICTPGRLVEHIENTTGFLLNAVRWLVIDEADQLLNQNFQGWAN 380
Query: 218 ---------LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
P L + + R DA++ A + RR +L
Sbjct: 381 VLMDALHGETPVDLMNAQERIQRREHDANSIWSVALPA----RR-------------QLT 423
Query: 269 KMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR-----------YKLPERLESYKL-ICE 315
K+VLSAT+ +D KL+ L L P L + +T ++LP LE + + + +
Sbjct: 424 KVVLSATIEKDVTKLSTLRLKRPELVIVQDDTTEVQPLDYEDDVFELPSTLEEFAVHVGD 483
Query: 316 SKLKPLYLVALL 327
KPL+L+ +L
Sbjct: 484 GSNKPLHLLYVL 495
>gi|150864672|ref|XP_001383606.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
gi|158514827|sp|A3LSJ2.2|DBP6_PICST RecName: Full=ATP-dependent RNA helicase DBP6
gi|149385928|gb|ABN65577.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
Length = 591
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 70/367 (19%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW--------QETI 63
L W+ +P+ S + P + P L L+ ++ F VQ+A+ + +
Sbjct: 138 LDWLATPIYASPEDSKPFSEFE-ISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRL 196
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + + D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L QVK F
Sbjct: 197 EPDV-KGDILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPLINQVKATFVQ 255
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI +E +++ P DI+V+TPGRL
Sbjct: 256 LSRGTNLSVVSLRNDVSIKEEGIKIVNSPP--------------------DIIVSTPGRL 295
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++HI + + L L +LV+DE DRLL +++Q W ++ D
Sbjct: 296 VEHI-SNKSINLNSLQFLVIDEADRLLNQSFQNWCQVLISSLEGD--------------- 339
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
+ +K P K++ SATLT D KL+ L P + + +
Sbjct: 340 ---------VNIAEEWKITPQ----KLIFSATLTTDSGKLSALKFQKPRLVIVNDRKQLV 386
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN 353
+ +P L Y + ++ +KPL L LL++ ++FT S E++ RLC LL
Sbjct: 387 NEIFNVPSSLSEYTIQFGTAKASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLE 446
Query: 354 -HFGELR 359
FG+L
Sbjct: 447 LMFGKLH 453
>gi|298709167|emb|CBJ31111.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 839
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 125/224 (55%), Gaps = 36/224 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIG----PGLFERDLCINSPTGSGKTLSYALPI 90
LDPRL L+ G+ FP+QV V + + + RD+C+++PTGSGKTL + L +
Sbjct: 183 LDPRLTEILRREGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGV 242
Query: 91 VQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 150
+Q L R V LRALV+LP+RDLA+QV VF A GL VGLA+GQ++ +E L+
Sbjct: 243 LQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVG 302
Query: 151 ------------------------RP-------KLEAGICYDPEDVLQELQSAVDILVAT 179
RP L++G + S VDI+VAT
Sbjct: 303 PVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSG-GWSGTGAPAGGSSEVDIVVAT 361
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
PGRL+DH+ T GFTL+HL YL++DE DRLL ++YQ W+ V++
Sbjct: 362 PGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIK 405
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 43/135 (31%)
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------------------- 296
P L K++ SATLT +P KLA LD+ +PL T
Sbjct: 519 PPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTAAGGQRRETSGADGDPRPSQETR 578
Query: 297 ------------GETRYKLPERLESYKLICESKLKPLYLVALLQSL-GEEK--CIVFTSS 341
G R+ P LE +C+S+ KPL L++LL+ + G + +VFTSS
Sbjct: 579 RSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLSLLREMVGRQADLSVVFTSS 638
Query: 342 VESTHRLCTLLNHFG 356
V+STHRL LL FG
Sbjct: 639 VDSTHRLFRLLQLFG 653
>gi|302927189|ref|XP_003054445.1| hypothetical protein NECHADRAFT_90274 [Nectria haematococca mpVI
77-13-4]
gi|256735386|gb|EEU48732.1| hypothetical protein NECHADRAFT_90274 [Nectria haematococca mpVI
77-13-4]
Length = 898
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 154/328 (46%), Gaps = 78/328 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ P+ VS P L L P+ L+ G F VQ A + P +R
Sbjct: 320 PWLAEPIRVSQDTRTPFADLGIL-PKAARVLEEKGFKDAFAVQTAAIP-LLLPTSKQRPG 377
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG- 129
D+ I++ TGSGKTL+YALP+V+ +S AV LRALVVLPTR+L Q ++ F A A
Sbjct: 378 DVLISAATGSGKTLAYALPVVRDISQGAVTRLRALVVLPTRELVKQAQEAFELCARAFEG 437
Query: 130 -----LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ-------------- 170
+ VG+++G S+ E L+ R + YDP D ++LQ
Sbjct: 438 GDRKRVRVGISIGSQSLKHEQESLMDR-----EVRYDP-DTYKKLQEESEQRKQKAGISA 491
Query: 171 ------------------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
S VD+L+ TPGRL++H+ T GF+L+++ +LVVDE
Sbjct: 492 LDDLDDDEADPRLSSMDGYVVDFPSKVDVLICTPGRLVEHMEQTPGFSLDYVRWLVVDEA 551
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 266
D+LL +++Q WL + F S F + R F D +
Sbjct: 552 DKLLAQSFQGWLDLAM--------------DKFRVSKFSA----------RDFPDMDFSG 587
Query: 267 LVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+ K++LSATLT+D + L QL L P +
Sbjct: 588 VRKVILSATLTRDLSLLNQLGLRRPRLI 615
>gi|410078027|ref|XP_003956595.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
gi|372463179|emb|CCF57460.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
Length = 629
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 177/370 (47%), Gaps = 79/370 (21%)
Query: 14 WMRSP---VDVSLFEDCPLD-HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGL-- 67
WM S D S+ + P D + L P+L ++ FP+Q + +TI P +
Sbjct: 163 WMNSTKIYYDNSMIK--PYDTYGSLLQPKLLQNIKKYFSQETFPIQ-TILLDTILPLINF 219
Query: 68 --------FER---DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
F R D+ +N+ TGSGKTL+Y++PI+QTLSNR + LR L+++PT+ L Q
Sbjct: 220 SWSSTKKNFTRRVGDILVNASTGSGKTLAYSIPIIQTLSNRKINKLRCLIIVPTKMLIHQ 279
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V + ++ L + + ++S+ +E S L LQ DIL
Sbjct: 280 VFETLQKLSSGTSLVISTSKLENSLREEHSRL--------------------LQVEPDIL 319
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
+ TPGRL+D + + + +L++L +LV+DE DRLL +++Q W +L +D S
Sbjct: 320 IITPGRLVDLL-SMKSISLKNLKFLVLDEADRLLNQSFQNWSEELLHSLNNDK----SQV 374
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 295
T LP +VKMV SATLT + KL L L++P LFLT
Sbjct: 375 DT-LPG-----------------------NVVKMVFSATLTTNTEKLNTLRLYNPKLFLT 410
Query: 296 TGETRYKLPERLESYKLICESKLKPLY--------LVALLQSLGEEKCIVFTSSVESTHR 347
Y LP++L+ IC K LY L +Q + K ++F S E++ R
Sbjct: 411 QSVKLYNLPKKLQETN-ICIPTAKSLYKPLFLLHLLKKKVQESIDNKILIFVKSNEASLR 469
Query: 348 LCTLLNHFGE 357
L TLL+ E
Sbjct: 470 LATLLSVMAE 479
>gi|444321634|ref|XP_004181473.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
gi|387514517|emb|CCH61954.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
Length = 639
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 156/318 (49%), Gaps = 69/318 (21%)
Query: 52 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 98
FP+Q + +T+ P L F R D+ +N+ TGSGKTL Y +PI+Q LS+R
Sbjct: 194 FPIQ-TILLDTVLPILNFSLSITKKHFTRRVGDILVNASTGSGKTLGYCIPIIQALSSRK 252
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
V LR+L++LPT+ L QV D + +A L + ++ ++S+ +E + +K+
Sbjct: 253 VNKLRSLIILPTKLLINQVFDTLSKLAEGTSLIISISKLENSLKEEHQKFLKQ------- 305
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
+P DIL+ TPGRL+DH+ L++L LV+DE DRLL +++Q W
Sbjct: 306 --EP-----------DILIMTPGRLVDHL-QLNSINLKNLKMLVLDEADRLLNQSFQNWC 351
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++ + +E+ DK ++K V SATLT
Sbjct: 352 SELMN----------------------------KIKLEKN--DKLPGNIIKFVFSATLTT 381
Query: 279 DPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEK 334
+ KL +L + P LF+ Y LP L+ + + +S KPL L+ L +L K
Sbjct: 382 NTEKLNKLQFYKPKLFIMDTVKLYNLPTTLQEFNINIPTAKSVYKPLILLRLFANLKRSK 441
Query: 335 CIVFTSSVESTHRLCTLL 352
+VF S E++ RL +LL
Sbjct: 442 ILVFVKSNEASLRLASLL 459
>gi|207341548|gb|EDZ69573.1| YNR038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 515
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 81 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 139
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 140 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 196
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 197 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 238
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 239 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 268
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 269 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 328
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 329 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 372
>gi|256273352|gb|EEU08290.1| Dbp6p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 60/309 (19%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L QV + L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSL 288
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
V +A ++S+ DE +L LE DIL+ TPGRL+DH+N
Sbjct: 289 IVSIAKLENSLKDEHKKL---SNLEP-----------------DILITTPGRLVDHLNM- 327
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
+ L++L +L++DE DRLL +++Q W P ++ ++D + LP
Sbjct: 328 KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT-------LPG-------- 372
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLES 309
++KM+ SATLT + KL L+L+ P LFL + Y+LP +L
Sbjct: 373 ---------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNE 417
Query: 310 YKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIK 361
+ + +S KPL L+ ++ Q + K ++F S ES+ RL LL E R +
Sbjct: 418 FNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQ 477
Query: 362 IKEYSGLQR 370
LQ
Sbjct: 478 SSVLKNLQN 486
>gi|239790811|dbj|BAH71942.1| ACYPI006812 [Acyrthosiphon pisum]
Length = 245
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 21/229 (9%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ--V 56
+ KK VLP W+ P VS+ + P+D +P LDP L L+N G + FPVQ +
Sbjct: 19 KKNKKVKRVLPDWLAKPTVVSVDLKHLEVPIDGIPELDPALVQKLKNKGCTHFFPVQNQL 78
Query: 57 AVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
W + + RDLCI++PTGSGKTLSY LPI+QTL + LRAL+VLPT+DL
Sbjct: 79 VPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQLRALIVLPTKDL 138
Query: 114 ALQVKDVF-AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
A QV VF I A L V L ++ ++ E I + YD +L
Sbjct: 139 AAQVYKVFLYYIKNAFDLRVLLLESKNMTLEKEKERI--------VQYDSSIGWIDL--- 187
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
VDI+V TPGRL+DH+ T GF+L++L +LV+DE D WL V
Sbjct: 188 VDIIVTTPGRLVDHLYYTEGFSLKNLRFLVLDEADSFTNILQNEWLHKV 236
>gi|259148989|emb|CAY82233.1| Dbp6p [Saccharomyces cerevisiae EC1118]
gi|323346760|gb|EGA81041.1| Dbp6p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763421|gb|EHN04950.1| Dbp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 486
>gi|6324366|ref|NP_014436.1| Dbp6p [Saccharomyces cerevisiae S288c]
gi|1730678|sp|P53734.1|DBP6_YEAST RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|1302541|emb|CAA96318.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814686|tpg|DAA10580.1| TPA: Dbp6p [Saccharomyces cerevisiae S288c]
gi|392297030|gb|EIW08131.1| Dbp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 486
>gi|50288559|ref|XP_446709.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661318|sp|Q6FST5.1|DBP6_CANGA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49526017|emb|CAG59636.1| unnamed protein product [Candida glabrata]
Length = 651
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 167/334 (50%), Gaps = 67/334 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
L P+L ++ S FP+Q A+ + + F R D+ +N+ TGSGK
Sbjct: 200 LTPKLLNNIEKYFSKSTFPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGK 259
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PI+QTLS+R V LR L++LPT+ L QV + +A L + ++ ++S
Sbjct: 260 TLAYSIPIIQTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEGTSLVITVSKLENSFN 319
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E L+K + DI + TPGRL+DH+ +L +L +LV
Sbjct: 320 EEHKRLLK--------------------TEPDIFITTPGRLVDHL-TNSSISLRNLKFLV 358
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL +++Q W+P V+ +SD ++ +P +
Sbjct: 359 LDEADRLLNQSFQNWIPEVMSKFKSDKFDQ-------MPGS------------------- 392
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L L++P LF T Y LP L+ Y+L +S
Sbjct: 393 ----IIKMVFSATLTTNTEKLNDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVY 448
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
KPLYL+ LL+ L K +VF S ES+ +L LL
Sbjct: 449 KPLYLLKLLEQLSGGKTLVFVRSNESSLKLEVLL 482
>gi|160380625|sp|A6ZSB3.1|DBP6_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|151944567|gb|EDN62845.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 486
>gi|190408963|gb|EDV12228.1| ATP-dependent RNA helicase DBP6 [Saccharomyces cerevisiae RM11-1a]
Length = 629
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNASKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 486
>gi|342878214|gb|EGU79569.1| hypothetical protein FOXB_09852 [Fusarium oxysporum Fo5176]
Length = 913
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 159/332 (47%), Gaps = 68/332 (20%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K + +LP W+ P+ VS P L + P+ L+ G F VQ A +
Sbjct: 316 KPNYKILPSWLEDPIRVSQDTRTPFAELDII-PKACRVLEEKGFRDAFAVQTAAIPLLLP 374
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
D+ I++ TGSGKTL+YALP+V+ +S + LRALVVLPTR+L Q ++ F
Sbjct: 375 TSKQRGDVLISAATGSGKTLAYALPVVRDISQGCLTRLRALVVLPTRELVKQAQETFELC 434
Query: 125 APA----------VGLSVG---LAVGQSSIADE------------ISELIKRPKLEAGIC 159
A A VG+S+G L V Q + D+ E +R +L+ G+
Sbjct: 435 ARAFDGGDRKRVRVGISIGSQSLEVEQKAFMDQELRYDPDTYKKLKEETQRRNQLKWGLS 494
Query: 160 Y-------DPEDVLQELQ----------SAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
D ED L S +D+L+ TPGRL++H+ TRGF L+++ +LV
Sbjct: 495 ASENLQDLDMEDTDPRLSHMNGYVVDYLSKIDVLICTPGRLVEHMEQTRGFNLDYVRWLV 554
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
VDE D+LL +++Q WL V++ R N+F+ R F D
Sbjct: 555 VDEADKLLAQSFQGWLDLVMEKFRI---NKFT---------------------ARDFHDM 590
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+ + K++LSATLT+D + L QL L P +
Sbjct: 591 DFSGVRKVILSATLTRDLSLLNQLGLQRPRLI 622
>gi|349580973|dbj|GAA26132.1| K7_Dbp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 60/309 (19%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L QV + L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSL 288
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
V +A ++S+ DE +L LE DIL+ TPGRL+DH+N
Sbjct: 289 IVSIAKLENSLKDEHKKL---SNLEP-----------------DILITTPGRLVDHLNM- 327
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
+ L++L +L++DE DRLL +++Q W P ++ ++D + LP
Sbjct: 328 KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT-------LPG-------- 372
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLES 309
++KM+ SATLT + KL L+L+ P LFL + Y+LP +L
Sbjct: 373 ---------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNE 417
Query: 310 YKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIK 361
+ + +S KPL L+ ++ Q + K ++F S ES+ RL LL E R +
Sbjct: 418 FNINIPTAKSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQ 477
Query: 362 IKEYSGLQR 370
LQ
Sbjct: 478 SSVLKNLQN 486
>gi|323303225|gb|EGA57024.1| Dbp6p [Saccharomyces cerevisiae FostersB]
Length = 629
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGXSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
K ++F S ES+ RL LL E R + LQ
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQN 486
>gi|323335752|gb|EGA77033.1| Dbp6p [Saccharomyces cerevisiae Vin13]
Length = 532
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 60/309 (19%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L QV + L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSL 288
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
V +A ++S+ DE +L LE DIL+ TPGRL+DH+N
Sbjct: 289 IVSIAKLENSLKDEHKKL---SNLEP-----------------DILITTPGRLVDHLNM- 327
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
+ L++L +L++DE DRLL +++Q W P ++ ++D + LP
Sbjct: 328 KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT-------LPG-------- 372
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLES 309
++KM+ SATLT + KL L+L+ P LFL + Y+LP +L
Sbjct: 373 ---------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNE 417
Query: 310 YKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIK 361
+ + +S KPL L+ ++ Q + K ++F S ES+ RL LL E R +
Sbjct: 418 FNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQ 477
Query: 362 IKEYSGLQR 370
LQ
Sbjct: 478 SSVLKNLQN 486
>gi|365991671|ref|XP_003672664.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
gi|343771440|emb|CCD27421.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
Length = 709
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 176/363 (48%), Gaps = 67/363 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
L+P+L ++ FP+Q + +TI P L F R D+ +N+ TGSG
Sbjct: 233 LEPKLLQNIEKYFSHETFPIQ-TILLDTILPTLNFSLKTTKKHFTRRVGDILVNASTGSG 291
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KTL+Y++PI+QTLS R V LRAL+++PT+ L QV D + ++ GL + ++ ++S+
Sbjct: 292 KTLAYSIPIIQTLSKRKVNKLRALIIVPTKLLIHQVYDTLSKLSQGTGLIITMSKLENSL 351
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+E KL+ +P DIL+ TPGRL+DH+N F L++L L
Sbjct: 352 KEE------HIKLQTN---EP-----------DILITTPGRLVDHLNM-NSFNLKNLKML 390
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DRLL +++Q W +++ D + +P S+ T + G
Sbjct: 391 VLDEADRLLNQSFQNWCNELMKKLTIDKTPIYQ-----IPGDEISMSTDQMPG------- 438
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL-ICESKLK 319
++KM+ SATLT + KL L L P LF+ Y LP L+ Y + I +K
Sbjct: 439 ----NIIKMIFSATLTTNTQKLHDLKLFKPKLFVMDSVKLYHLPSTLQEYIINIPTAKSL 494
Query: 320 PLYLVALL--------QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 371
L L Q + + +VF S ES+ RL TL L+I I + S L
Sbjct: 495 FKPLYLLKLLLKQYEDQQMQGSRILVFVKSNESSLRLATL------LKIMINKTSNLNES 548
Query: 372 SVR 374
+ +
Sbjct: 549 NYQ 551
>gi|238880181|gb|EEQ43819.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 606
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 75/370 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETIG 64
P SP D F D L + L+ MG + F VQ++V + +
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
P D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L QVK +
Sbjct: 214 PDRV-GDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRAIILVPTKPLINQVKSTLLQL 272
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
+ L + SI DE L K S DI+V+TPGRL+
Sbjct: 273 SSGTNLQIAALKNDVSINDEKDSLTK--------------------SVPDIIVSTPGRLV 312
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
+H+ L L YL++DE DRLL +++Q W +L S
Sbjct: 313 EHL-LNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQ---------------- 355
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---- 300
++ + + V+ K+V SATLT D KL+ L ++P + +++
Sbjct: 356 INIAEVWKLSVQ------------KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVN 403
Query: 301 --YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNH 354
+ +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL LL
Sbjct: 404 EIFTVPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLTS 463
Query: 355 -FGELRIKIK 363
F +L I +K
Sbjct: 464 LFQKLSINLK 473
>gi|294657476|ref|XP_459782.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
gi|218512021|sp|Q6BPT8.2|DBP6_DEBHA RecName: Full=ATP-dependent RNA helicase DBP6
gi|199432720|emb|CAG88021.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
Length = 576
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 178/377 (47%), Gaps = 73/377 (19%)
Query: 12 LPWMRSPVDVSLFEDCPLDHL--PCLDPRLKVALQNMGISSLFPVQVAVW--------QE 61
L W+ +P+ + E P P L + L+NMG S F VQ++V +
Sbjct: 112 LDWLTTPIYTAPEETKPFAEFQNPPLSSLMIKNLRNMGFESAFSVQISVLNLMLKDIERN 171
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
+ P + DL +N+ TGSGKTL+Y++PI+++L V +RA++++PT+ L QVK
Sbjct: 172 RLQPDM-RGDLLVNASTGSGKTLAYSIPIIESLQTVKVPRVRAIILVPTKPLINQVKTTL 230
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV-DILVATP 180
++ LS+ S+ +++S IK E GI +LQ+ DI+V+TP
Sbjct: 231 NQLSKGTNLSI------VSLKNDLS--IK----EEGI---------KLQTNEPDIIVSTP 269
Query: 181 GRLMDHINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
GRL+DH+ T G+ +L++L YLV+DE DRLL +++Q W
Sbjct: 270 GRLVDHL--TNGYISLKNLQYLVIDEADRLLNQSFQNW-------------------CQI 308
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
L S I+ + +K + KM+ SATLT D KL+ L H P +
Sbjct: 309 LISKIDEFTNIKERNISNSWK----LNVQKMIFSATLTTDAGKLSLLKFHKPRLIIVNNK 364
Query: 300 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVES----T 345
+ LP L +KL +S LKPL L L S + ++FT S ++ +
Sbjct: 365 EQLVNEMFSLPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASLRLS 424
Query: 346 HRLCTLLNHFGELRIKI 362
L ++N G I I
Sbjct: 425 RLLSLIMNKLGSETINI 441
>gi|448535807|ref|XP_003871022.1| Dbp6 protein [Candida orthopsilosis Co 90-125]
gi|380355378|emb|CCG24896.1| Dbp6 protein [Candida orthopsilosis]
Length = 609
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 171/359 (47%), Gaps = 67/359 (18%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER- 70
L W+ +P V+ E L +D + L++ G + F VQV+V + TI P +
Sbjct: 154 LDWLTTPQYVTPNEKLSFQGL-GVDETVLNNLKSHGFNEAFAVQVSVLK-TIIPEIIANK 211
Query: 71 -------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
D+ +N+ TGSGKTL+Y++PIVQ L +R V +RA+V++PTR L QVK
Sbjct: 212 RRPDAFGDILVNASTGSGKTLAYSIPIVQALHDRVVPRVRAIVLVPTRPLINQVKTTMLQ 271
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI +E SE +K+ DI+V+TPGRL
Sbjct: 272 LSQGTNLSVVGLKNDISIKEE-SEKLKK-------------------MVPDIVVSTPGRL 311
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+N +L L +LV+DE DRLL +++Q W LT +E +
Sbjct: 312 VEHLNIN-SISLSGLRFLVIDEADRLLNQSFQNWSSV---LTNKIDEQQ----------- 356
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
+R ++ ++ K+V SATLT D KL+ L+ + P + +T
Sbjct: 357 ------------KRDISERWSLKVQKLVFSATLTTDAGKLSNLNFYKPRLIIVNDTEQLV 404
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL 352
+ +P L + + + ++ LKPL L L S + ++FT S ES RL LL
Sbjct: 405 NEMFSVPSLLSEFIIHYGVAKNSLKPLILAKFLASQKKLSNVLIFTKSNESCIRLSKLL 463
>gi|400598931|gb|EJP66638.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 810
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 142/295 (48%), Gaps = 69/295 (23%)
Query: 42 ALQNMGISSLFPVQVAVW-----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
ALQ G + F VQ A PG DL I++ TGSGKTL+YALPIV +S
Sbjct: 243 ALQIKGYADAFAVQTAAIPLLLPNNKSLPG----DLLISAATGSGKTLAYALPIVDDISQ 298
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS------VGLAVGQSSIADEISELIK 150
V LRALVVLPTR+L Q ++VF A S +G++VG + E L++
Sbjct: 299 GVVTRLRALVVLPTRELVRQAQEVFELCAKTYEGSDRKRVRIGVSVGSQQLKAEQEMLVE 358
Query: 151 RPK---------------------LEAGICYDPED----------VLQELQSAVDILVAT 179
R A + D ED + E S VD+L+ T
Sbjct: 359 RESRYDPDTYNRILQENLKAKGLPASADVEMDDEDRDARLGPWNGEVVEFTSTVDVLLCT 418
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL++H+ T GF L+++ +LV+DE D+LL +++Q WL TV+ R+
Sbjct: 419 PGRLVEHMEQTAGFNLDYVRWLVIDEADKLLAQSFQGWLETVMARFRAS----------- 467
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
S +G+ R F P+ + K+VLSATLT+D + L QL LH P +
Sbjct: 468 --SLYGA----------RDFPGMPHTGVRKVVLSATLTRDLSLLNQLALHRPQLV 510
>gi|346321375|gb|EGX90974.1| DEAD/DEAH box helicase [Cordyceps militaris CM01]
Length = 807
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 154/327 (47%), Gaps = 81/327 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGL 67
PW+ +P+ VS + + + LQ+ G + F VQ A PG
Sbjct: 216 PWLSAPIRVSQSTRASFADV-GIPAKTAEVLQSKGYTEAFAVQTAAIPLLLPNNNGLPG- 273
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
DL I++ TGSGKTL+YALPIV +S V LRALVVLPTR+L Q +DVF + A
Sbjct: 274 ---DLLISAATGSGKTLAYALPIVSDISQGVVTRLRALVVLPTRELVRQAQDVFELCSKA 330
Query: 128 VG------LSVGLAVGQSSIADEISELIKRPKLEAGICYDP---EDVL-QELQ------- 170
+ +G++VG + E LI+R YDP E +L Q LQ
Sbjct: 331 YEGGDRKRVRIGVSVGSQQLKTEQETLIERESR-----YDPDAYETILHQNLQAKGLPAS 385
Query: 171 -------------------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
S VD+L+ TPGRL++H+ T GF L+++ +LVVDE
Sbjct: 386 ADVDVDDEDRDARLGPWHGEVIDFTSTVDVLLCTPGRLVEHLEQTPGFALDYVRWLVVDE 445
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA-FGSLKTIRRCGVERGFKDKPY 264
D+LL +++Q WL TV R+ PSA +G+ R F PY
Sbjct: 446 ADKLLAQSFQGWLDTVSARFRA-------------PSALYGA----------RDFPGMPY 482
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHP 291
+ K+VLSATLT+D + L L L P
Sbjct: 483 SGVRKVVLSATLTRDLSLLGPLALRRP 509
>gi|354548454|emb|CCE45190.1| hypothetical protein CPAR2_702020 [Candida parapsilosis]
Length = 610
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 171/359 (47%), Gaps = 67/359 (18%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-------- 63
L W+ +P V+ E P LD ++ + ++G S F VQV+V + I
Sbjct: 155 LDWLTTPQYVTPNEKLPFQEFE-LDKVIQRNISSLGFSEAFAVQVSVLKMMIPEIKANKR 213
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P F D+ +N+ TGSGKTL+Y +PI+Q + NR V +RA+V++PT+ L QVK
Sbjct: 214 QPDAF-GDILVNASTGSGKTLAYCIPIIQAIHNRVVPRVRAIVLVPTKPLINQVKTTMMQ 272
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LS+ SI +E SE +K+ D++++TPGRL
Sbjct: 273 LSQGTNLSIVGLKNDISIKEE-SERLKKL-------------------VPDVIISTPGRL 312
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+N +L L +LV+DE DRLL +++Q W LT E + D +
Sbjct: 313 VEHLNLN-SISLASLRFLVIDEADRLLNQSFQNWSSV---LTSKIEEQQKHDIT------ 362
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
+R + ++ K+V SATLT D KLA L+ + P + +T+
Sbjct: 363 -------KRWSL----------KVQKLVFSATLTTDAGKLAILNFYKPRLIIVNDTQQLV 405
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL 352
+ +P L + + + ++ LKPL L L S + ++FT S ES RL LL
Sbjct: 406 NEMFSVPSLLSEFIISYGVAKNSLKPLILAKFLVSQDKLFNVLIFTKSNESCIRLAKLL 464
>gi|367006945|ref|XP_003688203.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
gi|357526510|emb|CCE65769.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
Length = 668
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 69/345 (20%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP------GLFER-------DLCINS 76
D+ LDP+L +Q + FP+Q + +T+ P G+ ++ D+ +N+
Sbjct: 200 DYKNQLDPKLLKNIQEKFSTETFPIQ-TILLDTVLPSLNFALGITKKNLTRRVGDILVNA 258
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
TGSGKTL+Y++PI+Q L R V LRA++++PT+ L QV + ++A L + +
Sbjct: 259 STGSGKTLAYSIPILQALIKRNVNKLRAIIIVPTKLLINQVFNTLNSLASGSSLIISTSR 318
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
+SS+ +E +L L + DI+V TPGRL+DH+ +++
Sbjct: 319 LESSLNEEHQKL--------------------LANEPDIVVVTPGRLVDHLQMG-SISVK 357
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+L +LV+DE DRLL +++Q W +L R + S +P
Sbjct: 358 NLKFLVLDEADRLLNQSFQNWCNELLSKIR-------TQKSDIMPG-------------- 396
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL--- 312
++KMV SATLT + KL L +HP LF+ Y +P++L+ +
Sbjct: 397 ---------NIIKMVFSATLTTNTEKLHSLQFYHPKLFVVDSVKLYNIPKKLQEFNFAIP 447
Query: 313 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
+S KPL+L+ LL L K +VF S +++ RL +LL+ E
Sbjct: 448 TAKSIYKPLFLLRLLDQLSNAKVLVFVKSNQNSLRLTSLLSKLIE 492
>gi|358255930|dbj|GAA57535.1| ATP-dependent RNA helicase DDX51/DBP6, partial [Clonorchis
sinensis]
Length = 1092
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 146/307 (47%), Gaps = 40/307 (13%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------- 70
P D+S + ++ L L+P ++ L ++G S LFPVQ V + +
Sbjct: 517 PSDLSFRQK--VEDLKELNPFMQSRLVDIGCSELFPVQACVIPSILRSYRLNKRRPLCRP 574
Query: 71 -DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+CI +PTGSGKTL+Y++P++Q L R LRALV+LP RDLA QV V +A
Sbjct: 575 SDICIAAPTGSGKTLAYSIPLIQLLHGRVQVFLRALVILPVRDLAAQVFQVLLDLAEGTD 634
Query: 130 LSVG--LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL-QSAVDILVATPGRLMDH 186
L V L SI LI K D D + + DI+VATPGRL+DH
Sbjct: 635 LRVSCLLICTNCSITPLQIVLINGSKSFMKEQLDLVDTTSSVAHTKADIVVATPGRLVDH 694
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF-- 244
I T GF+LE L LV+DE DR++ E Q W R + + + P+AF
Sbjct: 695 IYNTVGFSLERLRILVIDEADRVISEEKQDWY-------------RILEDALYHPNAFAF 741
Query: 245 ---GSLKTIRRCGVERG---------FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
G + R G++R + L K++ SATLT DP L + +L+ P
Sbjct: 742 DIDGEIGYRRPTGLQRTRPVMTIMHQYDTSHDITLQKILASATLTHDPEPLKRFNLYFPH 801
Query: 293 FLTTGET 299
+ +
Sbjct: 802 LFASSTS 808
>gi|291225370|ref|XP_002732681.1| PREDICTED: dead box protein 73D-like [Saccoglossus kowalevskii]
Length = 703
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 31/215 (14%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFEDC-PLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+ ++K VLP W+ +P +D + ++ +D L L+ ++ L+ GI+ FPVQ V
Sbjct: 271 QQEEKVHRVLPDWLANPSIIDNDISKNTTSVDELSGLNQKIVSRLKEGGITHFFPVQSQV 330
Query: 59 W-----------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
IG G DLC+++PTGSGKTL++ +PI+Q L NR V +RALVV
Sbjct: 331 IPAVLHSIKHGIHTGIG-GYRPNDLCVSAPTGSGKTLAFVIPIIQALLNRVVCRVRALVV 389
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
LPTRDLA Q+ +VF + GL V L G + E +A + + +++
Sbjct: 390 LPTRDLATQIHEVFTYYSQGTGLKVALIAGHGTFLQE----------QASLLRESDNI-- 437
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
S DI+++TPGRL+DHIN T+GFTL++L +L+
Sbjct: 438 ---SLADIVISTPGRLVDHINKTQGFTLQYLRFLL 469
>gi|398407893|ref|XP_003855412.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
gi|339475296|gb|EGP90388.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
Length = 736
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 47/316 (14%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+ +++ TGSGKT++Y LP+++ L A R L ALVV+PTR+L +QV V ++ G
Sbjct: 297 DVAVSAATGSGKTIAYLLPMIEALRRNATRGRLGALVVVPTRELVVQVAAVADSLCKGCG 356
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L VG+A G DE + ++ I + V SAVDILVATPGRL++HI++
Sbjct: 357 LKVGMATGTGKFKDEQDHAKEEQRMRDTIHGITQHVAT-YDSAVDILVATPGRLLEHISS 415
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTV---LQLTRSDNENRFSDASTFLPSAFGS 246
T GF L +L +L++DE D+LL Y+ +L ++ L RS +E +
Sbjct: 416 TPGFNLVYLQWLIIDEADKLLDNQYEGFLDSLNAELARPRSIHEQDVRE----------- 464
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------- 296
+ +R G+ + D RL K+VLSAT+T+D +KL L L P +
Sbjct: 465 -QYLRSKGM---WDDVRERRLRKVVLSATMTRDISKLTSLRLRRPTMIAVRGSEGIDAQA 520
Query: 297 -----GETR----------YKLPERLESYKL-ICESKLKPLYLVALLQSLGEEKCI-VFT 339
G+ R ++LP L Y + + + KPL S + + +FT
Sbjct: 521 RPGARGDGRDDGFRENASGFELPRTLIEYCVPVGDGSEKPLVRHRKDSSQPQAPTVLIFT 580
Query: 340 SSVESTHRLCTLLNHF 355
+S ES +RL LL
Sbjct: 581 ASNESVNRLSHLLKEI 596
>gi|336272777|ref|XP_003351144.1| hypothetical protein SMAC_08159 [Sordaria macrospora k-hell]
gi|380087833|emb|CCC13993.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 813
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 161/364 (44%), Gaps = 77/364 (21%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ +P+ V+ P L + P L G F VQ A + + D+
Sbjct: 205 PWLANPIRVTTETRKPFTEL-GISPEAAKVLATKGFKDAFAVQTAALPLLLPNPDLQGDV 263
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG--- 129
+ +PTGSGKTL+Y LP+VQ ++ LR ++VLPTRDL QV+ A A A
Sbjct: 264 VVAAPTGSGKTLAYVLPMVQDIALSQTTKLRGVIVLPTRDLVQQVQAACEACAAAFAGSA 323
Query: 130 ----LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS-------------- 171
+ VG A+G +E ++ + YDP+ + L+
Sbjct: 324 DGKRVKVGTAMGNRPFKEEQGVIMGTEQ-----KYDPQGYQKWLERQKQLVDLDGDSDED 378
Query: 172 ----------------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 209
VDIL+ TPGRL++HI T+GFTL+++ +LVVDE D+L
Sbjct: 379 MEEELDLELKRPLPYHVIQHIPKVDILICTPGRLVEHITKTKGFTLDYVRWLVVDEADKL 438
Query: 210 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 269
L + +Q WL V N+ L + + +K PR K
Sbjct: 439 LAQDFQQWLDVV-------NDK---------------LAVSKPGARDFAANNKTGPR--K 474
Query: 270 MVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKL--PERLESYKL-ICESKLKPLYLVA 325
M+LSAT+T+D L L L P L + G L P L+ Y + + E LKPLYL+
Sbjct: 475 MILSATMTRDITLLNGLKLSRPKLVVLEGAKAGDLAIPATLKEYAIKVAEPSLKPLYLID 534
Query: 326 LLQS 329
LLQS
Sbjct: 535 LLQS 538
>gi|320594173|gb|EFX06576.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 911
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 175/385 (45%), Gaps = 89/385 (23%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--- 70
W+ PV VS L D +++ L G + F VQ AV + P ++
Sbjct: 304 WLAEPVRVSADTRASFGQLGIDDEQVQRVLAERGWTDAFAVQTAVIPMLLPPSAGQQRRG 363
Query: 71 DLCINSPTGSGKTLSYALPIVQ----TLSNRAVRCLRALVVLPTRDLALQVKDV------ 120
DL I++ TGSGKTL+Y LP+V+ S+ + R LRA++V+PTR+L QV DV
Sbjct: 364 DLVISAATGSGKTLAYVLPLVRDLSGGGSSLSGRRLRAIIVVPTRELVQQVHDVCETCAR 423
Query: 121 --FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL----------------------EA 156
A A + +G A+G S+ E + L++ ++ +
Sbjct: 424 AFSAGSAGGRRVRIGAAMGNQSLRREQAALVEEEQVYDPAGYRAALRRRQRWPLVGATDG 483
Query: 157 GICYDPEDVLQE-------------LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
G D D + E +S+VD+LV TPGRL++H+ +T GF L+H+ +LVV
Sbjct: 484 GSTTDWTDWVSESTSSVLLPDHVIRYKSSVDVLVTTPGRLVEHLRSTAGFALDHVRWLVV 543
Query: 204 DETDRLLREAYQAWLPTVL-QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
DE D+LL ++YQ WL VL +L R + G+ R F D
Sbjct: 544 DEADKLLGQSYQQWLTQVLGRLERPGK------------APLGA----------RDFSDS 581
Query: 263 PYPRLVKMVLSATLTQDPN---------------KLAQLDLHHPLFLTTGETRYKLPERL 307
+ K+VLSAT+T+D + K + D + ++G Y LP RL
Sbjct: 582 AESGVRKVVLSATMTRDLSSLGSLRLSRPRHVVLKGTRPDGEDGIHNSSGAAEYVLPRRL 641
Query: 308 -ESYKLICESKLKPLYLVALLQSLG 331
ES + + KPLYLV LL G
Sbjct: 642 RESAVKVRDESQKPLYLVDLLNDSG 666
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALQGRDIIGLAETGSGKTAAFALPILQALLENPAR-LFALILTPTRELAFQI 114
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L K+P +++
Sbjct: 115 SEQFEALGSTIGIKSAVIVGGIDMMTQAMMLAKKPH---------------------VVI 153
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GFTL++L YLV+DE DR+L ++ + +L++ +N +
Sbjct: 154 ATPGRLIDHLENTKGFTLKNLRYLVMDEADRILNMDFEEEVDKILKVIPRENRRTY---- 209
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+ SAT+T+ KL + L P+ +
Sbjct: 210 ---------------------------------LYSATMTKKVAKLQRASLTDPVRVEVS 236
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ ++L+ Y L +K K ++LV LLQ L + IVF ++ T +L +L + G
Sbjct: 237 -TKYQTVDKLQQYYLFIPAKYKEVHLVHLLQDLAGQSFIVFCATCNGTQKLALMLRNLG 294
>gi|452825309|gb|EME32306.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 568
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 169/370 (45%), Gaps = 68/370 (18%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE--TIGPGLFERDLCINSPTGSGKTLS 85
P + L + L+++ IS LF Q V + ++ F D+ + +PTG+GKTL
Sbjct: 14 PYKDVKALPEYIGKRLKSLNISKLFRFQWTVIKYLLSLDRSNFPGDVIVQAPTGTGKTLC 73
Query: 86 YALPIVQTLSNRAVR-CLRALVVLPTR----------------DLALQVKDVFAAIAPAV 128
YA+ I+ L +R+ R LR LV++PTR +L Q+ VF A+
Sbjct: 74 YAISILTALKSRSSRPRLRGLVIVPTRYLIFAYFGFYDKFLIRELVNQLYSVFLALIGDD 133
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
L V G +S++ E ++ I+ +L CY P VDIL++TP RL++HI+
Sbjct: 134 DLKVLGLSGDTSLSSERTKAIESIQLLEDECYSP-------VWKVDILISTPSRLVEHIH 186
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL-QLTRSDNENRFSDASTFLPSAFGSL 247
GF + +LV+DETDRLL W+ T+L ++RS + + + +L G
Sbjct: 187 QRVGFEPTTIEFLVLDETDRLLSGQSLDWIETILRHISRSSDVTSSENRNLYLTGELGLR 246
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------- 296
K IR K++ SAT T KLA L L +P T
Sbjct: 247 KPIR-----------------KLLFSATQTSSIAKLANLSLVNPTLFTYKQDDAVRSILL 289
Query: 297 --------GETRYKLPERLESYKLICESKLKPL-----YLVALLQSLGEEKCIVFTSSVE 343
+ +Y LP LE + L+C+S ++ L YL L SL E IVF SS
Sbjct: 290 GNSSSEKRSKQKYWLPFALEEFVLLCKSPVEKLVSLVWYLKHLDSSLSEAGVIVFASSKI 349
Query: 344 STHRLCTLLN 353
S HRL L+
Sbjct: 350 SAHRLFRFLS 359
>gi|320581353|gb|EFW95574.1| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6) [Ogataea
parapolymorpha DL-1]
Length = 549
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 178/376 (47%), Gaps = 68/376 (18%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPL-DHLPCLDPRLKVALQ-NMGISSLFPVQVAVW 59
+E K K+ L W+ +P + + P D P LDP + L+ GI+S F VQ+ V
Sbjct: 71 QEQKNKN---LNWLSTPEYHNTTQTKPFKDFEPALDPVIIFNLETKFGITSAFSVQINVI 127
Query: 60 Q--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ I P F D +N+ TGSGKTL+Y +PIVQ+L R V LR ++++PT+
Sbjct: 128 ESLLKDISANKIDPTPF-GDYLVNASTGSGKTLAYLIPIVQSLIGRVVPRLRCIILVPTK 186
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
L Q V++ I + L+ GL + ++ ++S + KL A
Sbjct: 187 PLITQ---VYSNI---LQLTKGLDINALALRSDVSVKEEAKKLAA--------------I 226
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
DI+V+TPGRL++H+ G L L +LVVDE DRLL +++Q W T+ +T+ +N+
Sbjct: 227 KPDIVVSTPGRLVEHL--LNGMDLSQLRFLVVDEADRLLNQSFQNWCDTL--ITKLENDQ 282
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
++ + F S T+ +C K++ SATLT D KL L L P
Sbjct: 283 KYGEGEDFYNSY-----TV-KCS--------------KLIFSATLTTDSEKLFHLKLFKP 322
Query: 292 LFLTTGETR------YKLPERLESYKLICESKL---KPLYLVALL-QSLGEEKCIVFTSS 341
+ Y++P L+ + KL KP+ L+ L Q +VFT S
Sbjct: 323 KLVVINNAEQLVNELYQIPPNLDEKFVRVNEKLAFFKPMVLLRYLEQPEYSSHGLVFTKS 382
Query: 342 VESTHRLCTLLNHFGE 357
ES RL LL E
Sbjct: 383 NESAIRLARLLTLLSE 398
>gi|452845537|gb|EME47470.1| hypothetical protein DOTSEDRAFT_146146 [Dothistroma septosporum
NZE10]
Length = 570
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 161/336 (47%), Gaps = 71/336 (21%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLS-NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
D+ +N+PTGSGKT++Y LPI++ L + A L AL+++PTR+L QV V ++A
Sbjct: 111 DVAVNAPTGSGKTIAYLLPIIEALRRSHAPGELSALIIVPTRELVQQVAAVAESLAKGSD 170
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ--------------SAVDI 175
+ VG++ + DE ++I G YDP Q++ SAV++
Sbjct: 171 ICVGMSGSTGTFRDEQGKIIN-----CGQRYDPAGYQQQIDDAVNGLVQHVPTYDSAVNV 225
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV-LQLTRSDNENRFS 234
LVATPGRL++HIN T GF L L +LV+DE D+LL Y+ +L ++ ++L R
Sbjct: 226 LVATPGRLLEHINNTPGFNLVRLTWLVIDEADKLLDNQYEGFLESLNVELERPRTTEEQD 285
Query: 235 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+L R+ G ++++ ++ K++LSAT+T+D +KL L L P +
Sbjct: 286 ARECYL----------RQKGRWEEWRER---KIRKIILSATMTKDISKLTTLKLRRPQMV 332
Query: 295 TTGETR-----------------------YKLPERLESYKL-ICESKLKPLYLVALL--- 327
T ++LP L Y + + + KPL LL
Sbjct: 333 VVRGTECEQQMIAGAELMKEDGVKQTVDGFELPRTLVEYSIPVGDGAEKPLIAFELLRTQ 392
Query: 328 ---QSLGEEKC-------IVFTSSVESTHRLCTLLN 353
+S +EK ++FTS ES RL LL
Sbjct: 393 ILRESDSKEKSQTDTPTVLIFTSRNESATRLSHLLK 428
>gi|85089972|ref|XP_958196.1| hypothetical protein NCU09756 [Neurospora crassa OR74A]
gi|28919532|gb|EAA28960.1| predicted protein [Neurospora crassa OR74A]
Length = 784
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 160/359 (44%), Gaps = 68/359 (18%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ +P+ V+ P L K+ L G F VQ A + + D+
Sbjct: 204 PWLANPIRVTTETRKPFTDLGISAEAAKI-LATKGFKDAFAVQTAALPLLLPNPDLQGDV 262
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD-------VFAAIA 125
+ +PTGSGKTL+Y LP+VQ ++ LR ++VLPTRDL QV+ FA +
Sbjct: 263 VVAAPTGSGKTLAYVLPMVQDIALSQTTKLRGVIVLPTRDLVQQVQQACEACAAAFAGSS 322
Query: 126 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD------------------------ 161
+ VG A+G +E ++ + Y
Sbjct: 323 GGKRVKVGTAMGNRPFKEEQGVIMGTEQEYDLKGYQKWLERQKQLVDLDEDSEQEEEELD 382
Query: 162 -------PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
P V+Q + VDIL+ TPGRL++HI T+GFTL+++ +LVVDE D+LL + +
Sbjct: 383 LQLKRPLPYHVIQHV-PKVDILICTPGRLVEHITKTKGFTLDYVRWLVVDEADKLLAQDF 441
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
Q WL V NE L + + +K PR K++LSA
Sbjct: 442 QQWLDVV-------NEK---------------LAVSKPGARDFAANNKTGPR--KVILSA 477
Query: 275 TLTQDPNKLAQLDLHHP-LFLTTGETRYKL--PERLESYKL-ICESKLKPLYLVALLQS 329
T+T+D L L L P L + G L P L+ Y + I E LKPLYLV LLQS
Sbjct: 478 TMTRDITLLNGLKLSRPKLVVLEGAKAGDLAIPATLKEYAIKITEPSLKPLYLVDLLQS 536
>gi|45200872|ref|NP_986442.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|74692158|sp|Q751D1.1|DBP6_ASHGO RecName: Full=ATP-dependent RNA helicase DBP6
gi|44985570|gb|AAS54266.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|374109687|gb|AEY98592.1| FAGL225Cp [Ashbya gossypii FDAG1]
Length = 607
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 68/318 (21%)
Query: 52 FPVQVAVWQE---------TIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FP+Q A+ ++ + R D+ +N+ TGSGKTL+YA+ ++ LS R V
Sbjct: 185 FPIQTALLDSVLPLMSQAYSVSKRYYTRKVGDILVNASTGSGKTLAYAMLLIHILSRRTV 244
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
LRA++++PT+ L QV D A+A + V ++ +S+ +E ++L +
Sbjct: 245 NKLRAVILVPTKLLVHQVYDTVQALAKGSSVVVAVSKMDTSLKEESAKLKAQ-------- 296
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
+P D+L+ TPGRL+DH+N + F+L++L +LV+DE DRLL +++Q W
Sbjct: 297 -EP-----------DVLIITPGRLVDHLN-MQTFSLKNLKFLVLDEADRLLNQSFQNWC- 342
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
++ + R ER FK ++KM+ SATLT +
Sbjct: 343 ---------------------------IELMTRLNAERPFKGP--GNVIKMIFSATLTTN 373
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE--K 334
+L L LH+P G Y +P +L+ Y L +S KPL L+ LL L E +
Sbjct: 374 TERLHDLQLHNPKLFLMGSQLYHMPAQLQEYNLPIPTSKSYAKPLILLRLLPLLSTESLR 433
Query: 335 CIVFTSSVESTHRLCTLL 352
+VF S E++ RL LL
Sbjct: 434 ILVFVKSNEASIRLAALL 451
>gi|189208975|ref|XP_001940820.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976913|gb|EDU43539.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 643
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 73/357 (20%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGPG 66
W+ P + + P L +DP LQ G VQ A+ +++ +G
Sbjct: 136 WLAQPTTIEASKTVPFSEL-GVDPFFAKTLQKQGFKDALAVQTALVPMLHTGFEQHLG-- 192
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
D+C+++ TGSGKTL+Y LPI++ L +R V L A+VV+P+R L Q V +
Sbjct: 193 ----DICVSAKTGSGKTLAYLLPIIEQLKDRTVPVLSAIVVVPSRQLVNQALQVAEELCS 248
Query: 127 AVGLSVGLAVGQSSIADEISELIK-RPKLEAGICYDP-------EDVLQELQSAV----D 174
+ VG A+G + A E +LIK RP+ YDP E L++ Q+
Sbjct: 249 GTKIKVGTALGNVAFATEQKQLIKLRPQ------YDPRRARELNEKALRQYQTGSMERRG 302
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW-----------LPTVLQ 223
+ GRL++HI T GF L + +LV+DE D+LL + +Q W P L
Sbjct: 303 LYEDLKGRLVEHIENTTGFLLNAVRWLVIDEADQLLNQNFQGWANVLMDALHGETPVDLM 362
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 283
+ + R DA++ A + RR +L K+VLSAT+ +D KL
Sbjct: 363 NAQERIQKRERDANSIWSIALPA----RR-------------QLTKVVLSATMEKDVTKL 405
Query: 284 AQLDLHHP-LFLTTGETR-----------YKLPERLESYKL-ICESKLKPLYLVALL 327
L L P L + ET ++LP LE + + + + KPL+L+ +L
Sbjct: 406 GTLRLKRPKLVVVQDETAEVQPLDYEDDVFELPSTLEEFAVHVGDGSNKPLHLLYIL 462
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALP++QTL + R L ALV+ PTR+LA Q+
Sbjct: 21 IQREAIPLALEGKDIIGLAETGSGKTGAFALPVLQTLLDNPQR-LYALVITPTRELAFQI 79
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 80 SEQFEALGSSIGIKCAVIVGGVDLMTQSLALTKKPH---------------------IVI 118
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YL++DE DR+L ++ + +L++ + S
Sbjct: 119 ATPGRLVDHLENTKGFSLRSLKYLIMDEADRILNMDFEEEVNKILKVIPKER-------S 171
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T+ KL + L +P+ +
Sbjct: 172 TYL-------------------------------FSATMTKKVAKLQRASLKNPVKVEVS 200
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+++ E+L+ + +K K YLV++L L I+F + + R+C LL H G
Sbjct: 201 -TKFQTVEKLQQSYIFIPNKFKDCYLVSILNDLAGNSFIIFCGTCNNVQRVCLLLRHLG 258
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 145/323 (44%), Gaps = 63/323 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + L L++ PTR
Sbjct: 94 FKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLILAPTR 152
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 153 ELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAVALAKKPH------------------ 194
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+++H YLV+DE DRLL + L +LQ D
Sbjct: 195 ---IVVATPGRLLDHMENTKGFSVKHFKYLVMDEADRLLDLDFGPILDKILQELNRD--- 248
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
RR M+ SAT++ N L + L +P
Sbjct: 249 -------------------RRT----------------MLFSATMSTKLNSLTRAALQNP 273
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ ++ E+ Y+ + L + K K +YLV LL + CI+FT ++ T R+ +
Sbjct: 274 VRVSISESSYQTVKNLMQRYMFIPHKYKDIYLVYLLDEFAGKTCIIFTRTIHETQRIAYV 333
Query: 352 LNHFGELRIKIKEYSGLQRQSVR 374
L G I + G QS R
Sbjct: 334 LRALGRSAIPL---HGQMNQSAR 353
>gi|347827854|emb|CCD43551.1| hypothetical protein [Botryotinia fuckeliana]
Length = 814
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 81/366 (22%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ SP+ VS L ++ L++ + F VQ AV + PG + D
Sbjct: 231 WLASPILVSPTTTAQFSDL-GVEVEAANILRSKSFNEAFAVQAAVLPLLL-PGSQQEPGD 288
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-- 129
+ +++ TGSGKTLSY LP++Q +S + LR L+V+PTR+L Q ++V + A
Sbjct: 289 VLVSAATGSGKTLSYVLPMIQDISRNTITRLRGLIVMPTRELVSQAREVCEVCSSAFSAG 348
Query: 130 ----LSVGLAVGQSSIADEISELI-----------------KRPKLEAGIC--------- 159
+ +G AVG + E + L+ K + E+
Sbjct: 349 SRKRVKIGTAVGNEAFRVEQANLMENTYRYDPILYHEQEERKNSRWESSDAGTDDEGEPF 408
Query: 160 YDPE------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
+D E D + E S VDIL+ TPGRL++H+ +T GFTL+++ +LV+DE D+LL ++
Sbjct: 409 FDDETVSPLPDHVIEPVSKVDILICTPGRLVEHLKSTPGFTLQNVKWLVIDEADKLLDQS 468
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q WL V+ N + LP+ +D R+ K+VLS
Sbjct: 469 FQQWLDIVM--------NSLATGQKSLPNN----------------RD----RVRKIVLS 500
Query: 274 ATLTQDPNKLAQLDLHHPLFLT----------TGETRYKLPERLESYKL-ICESKLKPLY 322
AT+T+D +L L L+ P + G + LP L + + + + LKPLY
Sbjct: 501 ATMTRDIGQLTSLKLYRPKLVVLEGSSAGDDGKGSQAHVLPSGLAEFAVKVDDENLKPLY 560
Query: 323 LVALLQ 328
L+ +L+
Sbjct: 561 LIEILK 566
>gi|452986712|gb|EME86468.1| hypothetical protein MYCFIDRAFT_151483 [Pseudocercospora fijiensis
CIRAD86]
Length = 596
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 168/371 (45%), Gaps = 104/371 (28%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFER--DLCINSPTGSGKTLSYALPIV 91
+ +G PVQ A+ + PG ER D+ +++PTGSGKT+SY LPI+
Sbjct: 1 MAGLGFQDALPVQQALIPLLLPPGEAGSSFLPGCEERLPDIAVSAPTGSGKTISYLLPII 60
Query: 92 QTLSNRAVRC-LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 150
Q L R LRAL+V+PTR+LALQV V A++ + G ++ +E +LI
Sbjct: 61 QALRKSPGRGRLRALIVVPTRELALQVDAVAKALSSGSEIKTEHIPGNRTLKEEQQKLIN 120
Query: 151 RPKLEAGICYDPEDVLQEL----------------------------------------- 169
R G Y+P++ + L
Sbjct: 121 R-----GRKYNPQECQKRLGIAKLRIDGLDQGSGDARDDTRIDDTVADTIAGFVNHIPTY 175
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL---REAYQAWLPTVLQLTR 226
+SAVD+LVATPGRLM+HIN+T GF L H+ +LV+DE D+LL +E + L T L R
Sbjct: 176 ESAVDLLVATPGRLMEHINSTSGFALTHVQWLVIDEADKLLDNQQEKVLSELNTELTRPR 235
Query: 227 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 286
D+E DA A L RR ER RL K+VLSAT+T+D +KL+ L
Sbjct: 236 FDDEQ---DARERYLRA-NDLWDERR---ER--------RLRKVVLSATMTRDISKLSSL 280
Query: 287 DLHHPLFLT----------------------TGETR-----YKLPERLESYKL-ICESKL 318
L P + G R ++LP L Y + + +
Sbjct: 281 RLRRPRLVVVRGTEAEEEMIASDARDDAGGEAGSVRQHADGFELPTTLVEYSVPVGDGSE 340
Query: 319 KPLYLVALLQS 329
KPL ++ LL+S
Sbjct: 341 KPLIVIELLRS 351
>gi|260940775|ref|XP_002615227.1| hypothetical protein CLUG_04109 [Clavispora lusitaniae ATCC 42720]
gi|238850517|gb|EEQ39981.1| hypothetical protein CLUG_04109 [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 66/366 (18%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVA--------VWQETI 63
L W+ +P + P + L P LK L+ MG SS F VQV + + +
Sbjct: 91 LDWLATPTFIDPELKQPFEELGVTAPVLK-NLRAMGFSSAFSVQVGTLRLIMEDIRRNRL 149
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P F DL +N+ TGSGKTL+Y++P+++ L +R V +RA++++PT+ L QV
Sbjct: 150 APD-FRGDLLVNASTGSGKTLAYSIPVIEALYDRVVPRVRAIILVPTKPLITQVSQTLRD 208
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LS+ SI +E GI + + D++V+TPGRL
Sbjct: 209 LSNGTTLSIVSLTSDLSIREE------------GI--------KITTNIPDVIVSTPGRL 248
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
+DH+ +LE L +L++DE DRLL +++Q W V+ S+ ++ A
Sbjct: 249 VDHL-LNGSISLEALRFLIIDEADRLLNQSFQNWSNVVV-----------SNLEKWVDPA 296
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
+ I R + KM+ SATLT D KL+ L + P L ++
Sbjct: 297 LNT-SNIWRLQTQ------------KMIFSATLTTDAGKLSLLKFNSPRLLVVNNSKQLV 343
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL- 352
+ +P +L +L ++ +KPL L ++Q+ +VF +S ++T RL +L
Sbjct: 344 REMFSVPVKLHENRLRFTSSKTAIKPLILAKFMMQANKLSSVLVFANSNDATLRLSKVLQ 403
Query: 353 NHFGEL 358
N F +L
Sbjct: 404 NLFNKL 409
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 65/305 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P +V + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 85 PTKVQI--EAIPLALQGRDVIGLAETGSGKTAAFALPILQALLEHPQR-LFALVLTPTRE 141
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ +G+ V + VG + + L K+P
Sbjct: 142 LAYQIAEQFEALGACIGIKVAVIVGGVDMVTQALCLAKKPH------------------- 182
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
++VATPGRL+DH+ T+GF+L L YLV+DE DR+L +++ + +LQ+
Sbjct: 183 --VIVATPGRLVDHLENTKGFSLRSLKYLVMDEADRILDMDFESEVNKILQVI------- 233
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHP 291
PR K L SAT+T+ KL + L P
Sbjct: 234 --------------------------------PRERKTYLFSATMTKKVTKLQRASLQDP 261
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ + ++Y+ ++L+ + + K K YLV +L + + CIVFTS+ ++ R L
Sbjct: 262 VKVEVS-SKYQTVDKLQQHYIFIPQKFKDCYLVYILNEMAGKSCIVFTSTCANSLRTALL 320
Query: 352 LNHFG 356
L + G
Sbjct: 321 LRNLG 325
>gi|50547515|ref|XP_501227.1| YALI0B22572p [Yarrowia lipolytica]
gi|74660077|sp|Q6CDN5.1|DBP6_YARLI RecName: Full=ATP-dependent RNA helicase DBP6
gi|49647093|emb|CAG83480.1| YALI0B22572p [Yarrowia lipolytica CLIB122]
Length = 607
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 56/356 (15%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W-- 59
++K + P +R+ V + + D L + L +G + F VQ AV W
Sbjct: 165 SRKTQLQTQPILRNATYVEIDDVGSFDEFD-LSKNMMKNLDTLGYTKAFSVQKAVIPWLL 223
Query: 60 --QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
Q+ + P + DL +++ TGSGKT +Y +PI++ L +R V +RA+VVLPT+ L +QV
Sbjct: 224 AQQKLLAPDR-KPDLLVSASTGSGKTATYGIPIIEKLRDRIVPRIRAVVVLPTKPLVMQV 282
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+DV ++ LSV ++ ++ S +R LE DI+V
Sbjct: 283 RDVLENLSKGSSLSV------VALRNDRSTKRERAVLETA----------------DIVV 320
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A PGRL++ + ++ +LVVDE DRLL + Y W +VLQ +N+ R
Sbjct: 321 AAPGRLVEQVKENPEL-FSYIEFLVVDEADRLLGQDYYDW-ASVLQ----NNQQRAQAGK 374
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 296
T L + +R + ++ SATLT +P +A +D+H+P +F+
Sbjct: 375 TNLTEHY-----VR--------------NMQTLIFSATLTANPEHIASMDIHNPGVFVIG 415
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
Y +P+ L + KPL L LL + +VFT S E+ R+ ++
Sbjct: 416 SSDSYSIPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKSSETAARVARMM 471
>gi|344303601|gb|EGW33850.1| hypothetical protein SPAPADRAFT_48957 [Spathaspora passalidarum
NRRL Y-27907]
Length = 621
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 163/351 (46%), Gaps = 71/351 (20%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S + P P L ++ L + ++ F VQ+AV +
Sbjct: 170 LNWLATPIYASPSDTKPFTEFP-LSQFMQRNLTSNNFTNAFSVQIAVLNLMLQDIHDHKL 228
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + + D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L QV+
Sbjct: 229 QPDV-KGDILVNASTGSGKTLAYSIPIIESLHTRVVPRIRAIILVPTKPLINQVRSTLLV 287
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI DE S+LI ++ DI+V+TPGRL
Sbjct: 288 LSKGTNLSVVSLKNDISIKDEASKLI--------------------ENVPDIIVSTPGRL 327
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF-LPS 242
++HI L L +LV+DE DRLL +++Q W Q+ S +N + A + LP
Sbjct: 328 VEHI-LQSSIDLSALQFLVIDEADRLLNQSFQNW----CQILLSKIDNNINIAEEWKLP- 381
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-- 300
+ K++ SATLT D KL+ L P + + +
Sbjct: 382 ------------------------VQKLIFSATLTTDAGKLSSLQFQKPRLVIVNDEKEL 417
Query: 301 ----YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVE 343
+ +P L +KL +S +KPL L L S G+ ++FT S E
Sbjct: 418 VNEIFTVPPTLSEFKLQFGSAKSSIKPLILTKFLISQGKLSNVLIFTKSNE 468
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 49 IQRESIPLALEGKDVIGLAETGSGKTGAFALPILQDLLEHPQR-LFALILTPTRELAFQI 107
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ A+G+ + VG + + +L K+P ++V
Sbjct: 108 SEQFEALGSAIGIKCAVVVGGIDMMSQALQLAKKPH---------------------VVV 146
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L + YLV+DE DR+L ++ L +L
Sbjct: 147 ATPGRLVDHLENTKGFNLRSVKYLVMDEADRILNMDFEIELDKIL--------------- 191
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
K PR + L SAT+T+ KL + L +P+ +
Sbjct: 192 ------------------------KVIPRERRTYLYSATMTKKVAKLQRASLKNPVKVEV 227
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L Y L SK K +YLV +L L +VF S+ +T R+ +L + G
Sbjct: 228 N-TKYQTVEKLLQYYLFIPSKYKDVYLVYILNELAGNSFMVFCSTCNNTQRVALMLRNLG 286
>gi|443921329|gb|ELU41023.1| DEAD domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 1291
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 10/135 (7%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
+D C+++PTGSGKTL+Y +PI + LS R V LRALVVLPTR+LA+QV++ F ++ G
Sbjct: 213 QDACVSAPTGSGKTLAYVVPITEILSTRIVTRLRALVVLPTRELAMQVRETFDIVSKGRG 272
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ--SAVDILVATPGRLMDHI 187
L + +A GQ S A E S+L+ + P + Q S VDIL+ TPGRL DH+
Sbjct: 273 LKIAIATGQHSFAHEQSQLV--------LVSPPSAIHPSPQYHSKVDILICTPGRLTDHL 324
Query: 188 NATRGFTLEHLCYLV 202
+ T GFTLEHL +LV
Sbjct: 325 HGTPGFTLEHLRFLV 339
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F AI ++G+ + VG + + L K+P
Sbjct: 99 LAFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSLALAKKPH------------------- 139
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 140 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVQKLERAALKDPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ + + SK K YLV +L L ++F S+ +T R+ LL
Sbjct: 220 KCAVS-SKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|402076555|gb|EJT71978.1| ATP-dependent RNA helicase dbp6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 890
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 177/378 (46%), Gaps = 93/378 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVA------LQNMGISSLFPVQVAVWQETIGPG 66
PW+ +P+ VS L L P L ++ L++ G F VQ AV +
Sbjct: 277 PWLGNPIHVSQSTRADWTTL-GLKPELGISTEIASFLESKGYEKAFAVQTAVIPRLLPTP 335
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV----FA 122
+ DL I++ TGSGKTL+Y LP+++ +S +V LRAL+V+PTR+L QV +V A
Sbjct: 336 ARQGDLVISAATGSGKTLAYVLPMIRDVSLGSVTKLRALIVVPTRELVRQVHEVCIICAA 395
Query: 123 AIAPAVG---LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE-----------DVLQ- 167
A A G + +G AVG + E L+ + + YDP D L+
Sbjct: 396 AYARQPGRKAVKIGTAVGNQAFKREQESLV-----DEELRYDPRGYQSIVEARKWDNLRK 450
Query: 168 -------------------------ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
++ S VDIL+ TPGRL++HI T GF L ++ +LV
Sbjct: 451 RELEELEFDLLDLVDKPLPLVNHVVDVVSKVDILICTPGRLVEHIGRTPGFDLSYVRWLV 510
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
VDE D+LL ++YQ WL V++ + P A R F +
Sbjct: 511 VDEADKLLEQSYQQWLDVVME-----------KLAVEFPGA-------------RDFPLQ 546
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGE--------TRYK--LPERL-ES 309
+ K++LSAT+T++ + L++L L P + L GE + Y+ LPE L ES
Sbjct: 547 NKSGVRKVILSATMTRNVSLLSKLRLRRPELIVLEGGEINGAPAESSSYELALPELLQES 606
Query: 310 YKLICESKLKPLYLVALL 327
I + + KP+YL+ LL
Sbjct: 607 AIKIRDPEQKPMYLIDLL 624
>gi|68490215|ref|XP_711056.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
gi|68490244|ref|XP_711043.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|74656092|sp|Q59MW2.1|DBP6_CANAL RecName: Full=ATP-dependent RNA helicase DBP6
gi|46432316|gb|EAK91804.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|46432330|gb|EAK91817.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
Length = 606
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 75/370 (20%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETIG 64
P SP D F D L + L+ MG + F VQ++V + +
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
P D+ +N+ TGSGKTL+Y++PI+++L R V +R ++++PT+ L QVK +
Sbjct: 214 PDRV-GDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRVIILVPTKPLINQVKSTLLQL 272
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
+ L + SI DE L K S DI+V+TPGRL+
Sbjct: 273 SSGTNLQIAALKNDVSINDEKDSLTK--------------------SVPDIIVSTPGRLV 312
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
+H+ L L YL++DE DRLL +++Q W +L S
Sbjct: 313 EHL-LNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQ---------------- 355
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---- 300
++ + + V+ K+V SATLT D KL+ L ++P + +++
Sbjct: 356 INIAEVWKLSVQ------------KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVN 403
Query: 301 --YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL-N 353
+ +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL LL +
Sbjct: 404 EIFTVPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLIS 463
Query: 354 HFGELRIKIK 363
F +L I +K
Sbjct: 464 LFQKLSINLK 473
>gi|448113511|ref|XP_004202369.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359465358|emb|CCE89063.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 623
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 160/359 (44%), Gaps = 64/359 (17%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ SP+ P L + L +MG F VQ V + +
Sbjct: 161 LNWLTSPIYADPSFKRPFSDFKSLSAFMIRNLDSMGYEEAFSVQNTVLEILLQDIEENKL 220
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + DL +N+ TGSGKT++Y++PI++ L R V +RA++++PT+ L QVK +
Sbjct: 221 RPDI-RGDLLVNAATGSGKTIAYSIPIIEALHKRVVPRVRAIILVPTKPLITQVKSTMSQ 279
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ L + SI +E +L ++P D++++TPGRL
Sbjct: 280 LSKGTSLRIVSFKSDISIQEEARKLK---------AHEP-----------DVIISTPGRL 319
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+ + L L +LV+DE DRLL +++Q W V+ ++ D S+
Sbjct: 320 VEHL-SNNTLDLSALRFLVIDEADRLLNQSFQNWCDVVI--------SKIEDNSSRASMI 370
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
F K + K++ SATLT D K+A L L P + +
Sbjct: 371 FDQWKL----------------KTQKLIFSATLTTDAGKIAGLQLQKPRLVIVNDKEQMV 414
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ +P L YK+ +S +KPL L LLQ+ +VF S E++ RL LL
Sbjct: 415 NEMFSVPPNLLEYKIQVGAAKSSMKPLILARYLLQNNKTSNVLVFAKSNEASIRLAKLL 473
>gi|406866482|gb|EKD19522.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 837
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 175/386 (45%), Gaps = 109/386 (28%)
Query: 9 MPVLP-------WMRSPVDVSLFEDCPLDHLPCLDPRLKV--ALQNMGISSLFPVQVAVW 59
+PVLP W+ SP+ VS H P L V AL G S F VQ AV
Sbjct: 266 LPVLPASASLPSWLASPIRVSPTATA---HFPDLGISKDVTKALAEKGYSQAFAVQAAVL 322
Query: 60 QETIGPGLFER-------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P L + D+ +++ TGSGKTLSY LP+++ + A + +R L+V+PTR+
Sbjct: 323 -----PLLLTKNRHRPSGDVLVSAATGSGKTLSYVLPMIEDVCRNASQGIRGLIVMPTRE 377
Query: 113 LALQVKDVFAAIAPAVGLS--------VGLAVGQSSIADEISELI------------KRP 152
L Q + V + A A +G AVG +I E L+ + P
Sbjct: 378 LVSQARLVSESCASAFSRGEGYTTRARIGTAVGNETIEAERVHLMTDDVPYDREEYRRIP 437
Query: 153 KLEAGIC----------YDPEDVLQEL-------QSAVDILVATPGRLMDHINATRGFTL 195
LE+ + + EDV L + VD+L+ TPGRL++H+ +T+GF+L
Sbjct: 438 SLESPLVPQSSDWEDDIFANEDVKPTLPGDISRPRPKVDVLICTPGRLVEHLKSTKGFSL 497
Query: 196 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 255
+ +L+VDE D+LL +++Q WLPTV+ K R G
Sbjct: 498 ACVKWLIVDEADKLLDQSFQQWLPTVIS------------------------KLDPRKGA 533
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR-----------YKL 303
R K+VLSAT+T+D +L QL L P L + G ++ + L
Sbjct: 534 VR-----------KIVLSATMTRDVGQLNQLKLFRPKLVVLEGSSQPDEDISARSGAHVL 582
Query: 304 PERL-ESYKLICESKLKPLYLVALLQ 328
P L ES + + +KPLYL+ LL+
Sbjct: 583 PALLAESSLKVDDESIKPLYLMELLK 608
>gi|291001239|ref|XP_002683186.1| predicted protein [Naegleria gruberi]
gi|284096815|gb|EFC50442.1| predicted protein [Naegleria gruberi]
Length = 610
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 160/357 (44%), Gaps = 79/357 (22%)
Query: 50 SLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
++ PV +A+ + + PG D+CI SPTGSGKTLSY LPIV+ LS+ LRA+V++P
Sbjct: 165 AVVPVLIAMTKSGV-PG----DICIGSPTGSGKTLSYVLPIVEVLSSLKFTKLRAIVIVP 219
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
L QV VF + L V + E S+L+ D L
Sbjct: 220 NSQLVKQVTQVFRSFEKYTSLKVKSLNPYNRFESEQSDLV--------------DSLTG- 264
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
S VDIL+ TP ++HI T+ FTLEHL +LV DE D LL + + +++ +
Sbjct: 265 DSKVDILIGTPSLFVEHIKKTKNFTLEHLKFLVYDEVDTLLSDEHSSFIKVI-------- 316
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP---RLVKMV-LSATLTQDPNKLAQ 285
A T+ + I R + + P P +++ SAT+T KL
Sbjct: 317 ------ADTY----YNCTSVISRRAKTQIIPNIPLPVAHSFARIICCSATITSHAGKLDI 366
Query: 286 LDLHHPLFLT--------TGE------------TRYKLPERLESYKLICESKLKPLYLVA 325
+ L+ P F T + E +Y +P+ L + + E+ KPLYL+A
Sbjct: 367 IRLNRPQFFTYLAPAKLRSAEDMSTSLDDPLVGKKYYIPDTLAQFIVKYEAVTKPLYLIA 426
Query: 326 LL--QSLGEEKCIVFTSSVESTHRLCTLL------------NHFG---ELRIKIKEY 365
LL +K +VF + ++ HRL LL + FG EL K EY
Sbjct: 427 LLLDNKCRSKKTLVFCNDSQTAHRLNLLLETAVSEGAFNSKDAFGIAPELNTKFSEY 483
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 99 LAFQISEQFEALGSSIGVKSAVIVGGIDMMSQSLALAKKPH------------------- 139
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L + YLV+DE DR+L ++ + +L++ D +
Sbjct: 140 --IVIATPGRLIDHLENTKGFNLRAIKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ +KL + L P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVHKLQRAALKDPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ + + SK K YLV +L L ++F S+ +T R+ LL
Sbjct: 220 KCAVS-SKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 58 IQKEAIPVALQGRDVIGLAETGSGKTASFALPILQALLENPQR-LFALVLTPTRELAFQI 116
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P +++
Sbjct: 117 SEQFEALGASIGVKSAVIVGGIDMMTQALLLAKKP---------------------HVII 155
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L+ L YLV+DE DR+L ++ + +L++
Sbjct: 156 ATPGRLVDHLENTKGFSLKSLKYLVMDEADRILNMDFEEEVDKILRVI------------ 203
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR + L SAT+T+ KL + L P+ +
Sbjct: 204 ---------------------------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEV 236
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y L +K K +YLV LL L +VF S+ +T R LL + G
Sbjct: 237 S-SKYQTVEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLG 295
>gi|448116165|ref|XP_004202989.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359383857|emb|CCE79773.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 615
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 164/359 (45%), Gaps = 64/359 (17%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ SP+ P L + L +MG F VQ V + +
Sbjct: 153 LNWLTSPIYADPSFKRPFSDFKSLSAFMIRNLNSMGYEEAFSVQNTVLEILLQDIEENRL 212
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + DL +N+ TGSGKT++Y++PI++ L R V +RA++++PT+ L QVK +
Sbjct: 213 RPDI-RGDLLVNAATGSGKTIAYSIPIIEALHERVVPRVRAIILVPTKPLITQVKSTMSQ 271
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LS+ S+ ++S + KL+A ++P D++++TPGRL
Sbjct: 272 LSKGTSLSI------VSLKSDLSVQEEARKLKA---HEP-----------DVIISTPGRL 311
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+ + L L +LV+DE DRLL +++Q W V+ ++ D S+
Sbjct: 312 VEHL-SNSTLDLSALRFLVIDEADRLLNQSFQNWCDIVI--------SKIDDTSSRASMI 362
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
F K + K++ SATLT D K+A L L P + +
Sbjct: 363 FDHWKL----------------KTQKLIFSATLTTDAGKIAGLQLQKPRLVIVNDKEQMV 406
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ +P L YK+ +S +KPL L L QS ++F S E++ RL LL
Sbjct: 407 NEMFSVPPNLLEYKIQVGAAKSSIKPLILARYLFQSGKTSNVLIFAKSNEASIRLAKLL 465
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 99 LAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKP-------------------- 138
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 139 -HVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ + + SK K YLV +L L ++F S+ +T R+ LL
Sbjct: 220 KCAVS-SKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 41 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 97
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 98 LAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKP-------------------- 137
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 138 -HVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 194
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 195 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 218
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ + + SK K YLV +L L ++F S+ +T R+ LL
Sbjct: 219 KCAVS-SKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLL 277
Query: 353 NHFG 356
+ G
Sbjct: 278 RNLG 281
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 99 LAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKP-------------------- 138
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 139 -HVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ + + SK K YLV +L L ++F S+ +T R+ LL
Sbjct: 220 KCAVS-SKYQTVEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 142/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ + F A+ + + + VG + + L K+P
Sbjct: 128 LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPH-------- 179
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 180 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 226
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 227 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 248
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + IVFT +
Sbjct: 249 SLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRT 308
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 309 VNETQRLAILLRALG 323
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 142/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ + F A+ + + + VG + + L K+P
Sbjct: 128 LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPH-------- 179
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 180 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 226
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 227 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 248
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + IVFT +
Sbjct: 249 SLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRT 308
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 309 VNETQRLAILLRTLG 323
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 69/352 (19%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
ED L +D +L A N+G F A+ +E+I L +D+ + TGSGKT
Sbjct: 81 EDKSFAELGVID-QLCDACANLG----FTKPTAIQKESIPIALEGKDIIGLAETGSGKTA 135
Query: 85 SYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
++ALPI+Q L + + + LV+ PTR+LA Q+ F A+ + + + VG +
Sbjct: 136 AFALPILQALMAAPQHEQHKFGLVLAPTRELAYQISQQFEALGSLINVRCAVLVGGMDMV 195
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+ L K P I+VATPGRL+DH+ T+GF++ L YLV
Sbjct: 196 PQAIALNKNPH---------------------IVVATPGRLLDHLENTKGFSMRSLKYLV 234
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL + L +LQ+ LPS RR
Sbjct: 235 MDEADRLLDLDFGPILDKILQV---------------LPSK-------RRT--------- 263
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 322
M+ SAT++ N L + L +P+ ++ + Y+ + L + K K +Y
Sbjct: 264 -------MLFSATMSTKLNNLTRAALQNPVRVSISSSSYQTVKNLMQRYIFIPHKFKDIY 316
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LV LL + CIVFT ++ T R+ LL G I + G QS R
Sbjct: 317 LVYLLNEFAGQTCIVFTRTINETQRIAFLLRALGRSAIPLH---GQMNQSAR 365
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E+I L RD+ + TGSGKT ++ALPI+Q L R ALV+ PTR+
Sbjct: 39 PTKIQV--ESIPLALQGRDIIGLAETGSGKTGAFALPILQALLETPQRFF-ALVLTPTRE 95
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 96 LAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSLALAKKPH------------------- 136
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 137 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 192
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 193 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 216
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 217 KCAVS-SKYQTVEKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLL 275
Query: 353 NHFG 356
+ G
Sbjct: 276 RNLG 279
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E+I L RD+ + TGSGKT ++ALPI+Q L R ALV+ PTR+
Sbjct: 39 PTKIQV--ESIPLALQGRDIIGLAETGSGKTGAFALPILQALLETPQRFF-ALVLTPTRE 95
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 96 LAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSLALAKKP-------------------- 135
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 136 -HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 192
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 193 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 216
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 217 KCAVS-SKYQTVEKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLL 275
Query: 353 NHFG 356
+ G
Sbjct: 276 RNLG 279
>gi|154296868|ref|XP_001548863.1| hypothetical protein BC1G_12523 [Botryotinia fuckeliana B05.10]
Length = 818
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 170/366 (46%), Gaps = 81/366 (22%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ SP+ VS L ++ L++ + F VQ AV + PG + D
Sbjct: 231 WLASPILVSPTTTAQFSDL-GVEVEAANILRSKSFNEAFAVQAAVLPLLL-PGSQQEPGD 288
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-- 129
+ +++ TGSGKTLSY LP++Q +S V LR L+V+PTR+L Q ++V + A
Sbjct: 289 VLVSAATGSGKTLSYVLPMIQDISRNTVTRLRGLIVMPTRELVSQAREVCEVCSSAFSAG 348
Query: 130 ----LSVGLAVGQSSIADEISELI-----------------KRPKLEAGIC--------- 159
+ +G AVG + E + L+ K + E+
Sbjct: 349 SRKRVKIGTAVGNEAFRLEQANLMENTYRYDPILYHEQEERKNSRWESSDAGTDDEGEPF 408
Query: 160 YDPE------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
+D E D + E S VDIL+ TPGRL++H+ +T G TL+++ +LV+DE D+LL ++
Sbjct: 409 FDDETVSPLPDHVIEPVSKVDILICTPGRLVEHLKSTPGLTLQNVKWLVIDEADKLLDQS 468
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q WL V+ N + LP+ +D R+ K+VLS
Sbjct: 469 FQQWLDIVM--------NSLATGQKSLPNN----------------RD----RVRKIVLS 500
Query: 274 ATLTQDPNKLAQLDLHHPLFLT----------TGETRYKLPERLESYKL-ICESKLKPLY 322
AT+T+D +L L L+ P + G + LP L + + + + LKPLY
Sbjct: 501 ATMTRDIGQLTSLKLYRPKLVVLEGSSAGDDGKGSQAHVLPSGLAEFAVKVDDENLKPLY 560
Query: 323 LVALLQ 328
L+ +L+
Sbjct: 561 LIEILK 566
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++A+PI+Q L + R L AL++ PTR+LA Q+
Sbjct: 48 IQREAIPVALQGSDIIGLAETGSGKTGAFAIPILQKLLDSPQR-LYALILTPTRELAFQI 106
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ A+G+ + VG + + L K+P I++
Sbjct: 107 SEQFEALGSAIGVKCAVVVGGIDMMSQSLMLAKKPH---------------------III 145
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++ + S
Sbjct: 146 ATPGRLIDHLENTKGFNLRALKFLVMDEADRILNMDFEQEVDKILKVIPRER-------S 198
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T+ KL + L +P+ +
Sbjct: 199 TYL-------------------------------YSATMTKKVAKLQRASLQNPVKVEVS 227
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ ++L+ Y L +K K +YLV++L L +VFTS+ +T R +L + G
Sbjct: 228 -SKYQTVDKLQQYYLFVPAKFKDVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLG 285
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 149/320 (46%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L +++NM + P+Q E+I L +D+ + TGSGKT ++A+PI+Q+L +
Sbjct: 77 PDLLESIENMKFTKPTPIQ----SESIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWH 132
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A + LV+ PTR+LA Q+K+ F A+ ++GL VG + D+ +L+++P
Sbjct: 133 -AQQPYFGLVLAPTRELAFQIKETFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPH--- 188
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+VATPGR+MDH+ T+GFTL++L YLV+DE DRLL +
Sbjct: 189 ------------------IIVATPGRIMDHLEHTKGFTLKNLKYLVMDEADRLLDMDFGP 230
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 231 ALDKILKVIPTKR-------TTYL-------------------------------FSATM 252
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + ++Y+ + L ++ K L+ LL + I
Sbjct: 253 TNKIEKLQRASLHNPVRVAVS-SKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMSKSII 311
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V R L G
Sbjct: 312 VFTRTVAHAQRTALLARILG 331
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 158/357 (44%), Gaps = 75/357 (21%)
Query: 12 LPWMRSPVDVSLFEDCPLD-HLPCLDPRLKVALQNMGISSLF-----------PVQVAVW 59
LP + S DCP + P ++ +++G++ + P ++ +
Sbjct: 86 LPETSGKMAASEEHDCPTETSQPVVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQI- 144
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ +
Sbjct: 145 -EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISE 202
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
F A+ ++G+ + VG + L K+P I++AT
Sbjct: 203 QFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH---------------------IIIAT 241
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D + TF
Sbjct: 242 PGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TF 294
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
L SAT+T+ KL + L +P+ +
Sbjct: 295 L-------------------------------FSATMTKKVQKLQRAALKNPVKCAV-SS 322
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL + G
Sbjct: 323 KYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 379
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ALPI+QTL ++ R L ALV+ PTR+LA Q+
Sbjct: 65 IQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLDKPQR-LYALVLTPTRELAFQI 123
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 124 SEQFEALGASIGIKCAVIVGGIDMMTQSLMLAKKPH---------------------IVI 162
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +
Sbjct: 163 ATPGRLVDHLENTKGFNLRSLKYLVMDEADRILNMDFEQEVDKI---------------- 206
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LK I R ER ++ SAT+T+ KL + L +P+ +
Sbjct: 207 ---------LKAIPR---ERN----------TLLFSATMTKKVAKLQRASLQNPVRVEVS 244
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ ++L+ Y L K K +YLV +L L +VF S+ +T R+ +L + G
Sbjct: 245 -SKYQTVDKLQQYYLFIPVKFKDVYLVYILNELAGNSFMVFCSTCANTQRVALMLRNLG 302
>gi|156841974|ref|XP_001644357.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114998|gb|EDO16499.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 501
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 160/344 (46%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
DP LK A++ MG +S+ PVQ TI P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 46 DPTLK-AIEKMGFTSMTPVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLH 100
Query: 96 NRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + +V+ PTR+LALQ+ V + + G+ +G ++ E +LIK
Sbjct: 101 SLKFKPRNGTGVIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLIK-- 158
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++LVATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 159 -------------------GVNMLVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEI 199
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R S M+
Sbjct: 200 GFEDEMKQIIKIL--PNEDRQS-----------------------------------MLF 222
Query: 273 SATLTQDPNKLAQLDLHH-PLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PLF+ E + LE ++CES + L L + L+
Sbjct: 223 SATQTTKVEDLARISLRKGPLFINVVTERDTSTADGLEQGYVVCESDKRFLLLFSFLKRN 282
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 283 QKKKIIVFLSSCNSVRYYAELLNY---IDLPVLELHGKQKQQKR 323
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L +
Sbjct: 80 PDLLEAIQQMNFAKPTPIQ----SEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWH 135
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A LV+ PTR+LA Q+KD F A+ +GL VG + D+ +L+++P
Sbjct: 136 -AQTPYFGLVLAPTRELAFQIKDTFDALGATMGLRSVCIVGGMDMMDQARDLMRKPH--- 191
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 192 ------------------IIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGP 233
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ +P P+ + SAT+
Sbjct: 234 ALDKILKV---------------IP-----------------------PKRTTYLFSATM 255
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + T+Y+ + L ++ K L+ LL + I
Sbjct: 256 TNKIEKLQRASLHNPVRVAVS-TKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSII 314
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V R L G
Sbjct: 315 VFTRTVAHAQRTALLARILG 334
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ + F A+ + + + VG + + L K+P
Sbjct: 128 LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPH-------- 179
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 180 -------------IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKI 226
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 227 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 248
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + IVFT +
Sbjct: 249 SLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRT 308
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 309 VNETQRLAILLRALG 323
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E + L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQREALPVALQGRDVIGLAETGSGKTASFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P +++
Sbjct: 110 SEQFEALGASIGVKSAVIVGGIDMMTQALTLAKKP---------------------HVII 148
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ L YLV+DE DR+L ++ + +L++
Sbjct: 149 ATPGRLVDHLENTKGFNLKSLKYLVMDEADRILNMDFEEEVDKILRVI------------ 196
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR + L SAT+T+ KL + L P+ +
Sbjct: 197 ---------------------------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEV 229
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y L +K K +YLV LL L +VF S+ +T R LL + G
Sbjct: 230 S-SKYQTVEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLG 288
>gi|258578509|ref|XP_002543436.1| predicted protein [Uncinocarpus reesii 1704]
gi|237903702|gb|EEP78103.1| predicted protein [Uncinocarpus reesii 1704]
Length = 789
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 174/375 (46%), Gaps = 66/375 (17%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
E ++ S LP W+ P+ VS P L L + AL + G S PVQ AV
Sbjct: 223 ESSRSPSYATLPEWLAHPLIVSSDAGRPFTDL-GLHSKQISALASQGYSQAMPVQSAVIP 281
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
+ G + D+CI++ TGSGKTLSY LP++ T+ V LRAL+V+PTR+L QV+
Sbjct: 282 LALN-GKHDGDICISAATGSGKTLSYVLPLISTIEPFPVGQLRALIVVPTRELVKQVRKT 340
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
P GL +G AVG +++ E S L + YDP + L++ +I +
Sbjct: 341 CDLFVPGTGLRIGTAVGSTALRSEQSLLT-----DLDQAYDP----RFLENNSNIFTSNS 391
Query: 181 G----RLMDHINATR------------GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 224
L D+I+ ++ F + ++V+DE DRLL E++Q W TV+
Sbjct: 392 DWANFNLQDYISESKELHDALPNHLSTPFANVDILWVVIDEADRLLNESFQEWASTVIPA 451
Query: 225 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 284
S S +T +P + G G + PR K++LSAT+T+D +KL
Sbjct: 452 IESK-----SSYTTSIP--------LNAEGSSVGHRS---PR--KIILSATMTKDVSKLN 493
Query: 285 QLDLHHPLFL--------------TTGETR---YKLPERLESYKL-ICESKLKPLYLVAL 326
L L +P FL T G T+ Y+LP L + + + KPL L+ L
Sbjct: 494 SLRLRNPKFLEVHATSNEKISSQGTIGNTQSECYQLPTTLNEIIVPVGDGSDKPLVLLEL 553
Query: 327 LQSLGEEKCIVFTSS 341
+ S C TS+
Sbjct: 554 MISF--LNCATSTST 566
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 145/307 (47%), Gaps = 65/307 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P ++ V E + L +DL + TGSGKT ++ALPI+Q L S ++V+ A V+ P
Sbjct: 49 PTKIQV--EAVPHALEGKDLIGLAQTGSGKTGAFALPILQALLESSQKSVQPFFACVLSP 106
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
TR+LA+Q+ + F A+ +GL G+ VG I + L KRP
Sbjct: 107 TRELAIQIAEQFEALGSGIGLRCGVLVGGVDIVQQTLILAKRPH---------------- 150
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
I+VATPGRL+DH++ T+GF+L L YLV+DE DRLL E ++ L +L + D
Sbjct: 151 -----IVVATPGRLLDHLSNTKGFSLRTLKYLVLDEADRLLNEEFEKSLDEILNVIPRDR 205
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ T+L SAT+T+ KL + L
Sbjct: 206 K-------TYL-------------------------------FSATMTKKVKKLQRACLR 227
Query: 290 HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 349
+P+ + ++Y + L+ SK K YLV +L + +VFT + ++T L
Sbjct: 228 NPVKIEAA-SKYSTVDTLKQQYRFVPSKHKDCYLVYILTEMSNSTAMVFTRTCDATSFLA 286
Query: 350 TLLNHFG 356
+L + G
Sbjct: 287 LVLRNLG 293
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L + R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALDGRDIIGLAETGSGKTGAFALPILNALLDTPQRFF-ALVLTPTRE 104
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 105 LAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKPH------------------- 145
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L+L D +
Sbjct: 146 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-- 201
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 202 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 225
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L +VF S+ +T R LL
Sbjct: 226 KCAVS-SKYQTVEKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLL 284
Query: 353 NHFG 356
+ G
Sbjct: 285 RNLG 288
>gi|156043944|ref|XP_001588528.1| hypothetical protein SS1G_10075 [Sclerotinia sclerotiorum 1980]
gi|154694464|gb|EDN94202.1| hypothetical protein SS1G_10075 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 821
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 166/374 (44%), Gaps = 97/374 (25%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQETIGPGLF 68
W+ SP+ VS + ++ L++ G + F VQ AV PG
Sbjct: 234 WLASPILVSPTTTAQFSEV-GVEAEAATVLRSKGFNEAFAVQAAVLPLLLHGTRQKPG-- 290
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
D+ +++ TGSGKTLSY LP+ Q +S V LR L+V+PTR+L Q ++V + A
Sbjct: 291 --DVLVSAATGSGKTLSYVLPMTQDISRNIVTRLRGLIVMPTRELVSQAREVCEVCSSAF 348
Query: 129 G------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE------------------- 163
+ +G AVG + E + L +E YDP
Sbjct: 349 SAGSRKRVKIGTAVGNEAFKVEQANL-----MENTYKYDPARYHEQERRKNLRWESSDAG 403
Query: 164 ------------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
D + E S VDIL+ TPGRL++H+ T GFTLE++ +LV+DE
Sbjct: 404 TDDEGEPLLDDEAISPLPDHIIEPVSKVDILICTPGRLVEHLKFTPGFTLEYVKWLVIDE 463
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
D+LL +++Q WL V+ + + +N F +
Sbjct: 464 ADKLLDQSFQQWLNVVMS-SLATGQNSFPNNRD--------------------------- 495
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLT--------TGETRYK--LPERLESYKL-IC 314
R+ K+VLSAT+T+D +L L L+ P + G++ + LP L + + +
Sbjct: 496 RVRKIVLSATMTRDIGQLTSLKLYRPKLVVLAGSSAGDDGKSSHAHILPPGLVEFAVKVD 555
Query: 315 ESKLKPLYLVALLQ 328
+ LKPLYL+ +L+
Sbjct: 556 DENLKPLYLMEILK 569
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 49 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVHTTVIVGGIDAMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --VIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 227 KCAVS-SKYQTVEKLQQYYIFIPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLL 285
Query: 353 NHFG 356
+ G
Sbjct: 286 RNLG 289
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 42 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 99 LAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPH------------------- 139
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++ D +
Sbjct: 140 --IIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 196 -----TFL-------------------------------FSATMTKQVQKLQRAALKNPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L +VF S+ +T R LL
Sbjct: 220 KCAV-SSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L ++++M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L +
Sbjct: 95 PDLLESIESMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWH 150
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A + ALV+ PTR+LA Q+KD F A+ ++GL VG + D+ +L+++P
Sbjct: 151 -AQQPYFALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPH--- 206
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 207 ------------------IIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGP 248
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ +P I+R + + SAT+
Sbjct: 249 ALDKILKV---------------IP--------IKR---------------ITYLFSATM 270
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ ++ ++Y+ + L ++ K L+ LL + I
Sbjct: 271 TNKIEKLQRASLHNPVKVSVS-SKYQTADNLIQSMMLVNDGYKNTILIHLLNEFIGKSII 329
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V R L G
Sbjct: 330 VFTRTVAHAQRTALLARILG 349
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 143/323 (44%), Gaps = 63/323 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR
Sbjct: 56 FTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQELLDKP-QPMFGLVLAPTR 114
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 115 ELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAIALAKKPH------------------ 156
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L + Q+
Sbjct: 157 ---IVVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKIFQV------- 206
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR M+ SAT++ N L + L P
Sbjct: 207 --------LPRE-------RRT----------------MLFSATMSTKLNNLTRAALQQP 235
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ ++ + Y+ + L + K K +YLV LL + CIVFT ++ T R+ L
Sbjct: 236 VKVSISSSSYQTVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETARIAFL 295
Query: 352 LNHFGELRIKIKEYSGLQRQSVR 374
L G I + G QS R
Sbjct: 296 LRALGRSAIPLH---GQMNQSAR 315
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 103 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 143
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 144 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 199
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 200 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 223
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L I+F S+ +T R LL
Sbjct: 224 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFIIFCSTCNNTQRTALLL 282
Query: 353 NHFG 356
+ G
Sbjct: 283 RNLG 286
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 48 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 104
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 105 LAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPH------------------- 145
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++ D +
Sbjct: 146 --IIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-- 201
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 202 -----TFL-------------------------------FSATMTKQVQKLQRAALKNPV 225
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 226 KCAV-SSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLL 284
Query: 353 NHFG 356
+ G
Sbjct: 285 RNLG 288
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALEGRDIIGLAETGSGKTGAFALPILNALLETPQRFF-ALVLTPTRE 104
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 105 LAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKP-------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L+L D +
Sbjct: 145 -HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-- 201
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 202 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 225
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L +VF S+ +T R LL
Sbjct: 226 KCAVS-SKYQTVEKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLL 284
Query: 353 NHFG 356
+ G
Sbjct: 285 RNLG 288
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L +
Sbjct: 77 PDLLEAIQQMKFTKPTPIQ----SEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWH 132
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A LV+ PTR+LA Q+KD F A+ +GL VG + D+ +L+++P
Sbjct: 133 -AQTPYFGLVLAPTRELAFQIKDTFDALGTTMGLRSVCIVGGMDMMDQARDLMRKPH--- 188
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 189 ------------------IVVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGP 230
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ +P P+ + SAT+
Sbjct: 231 ALDKILKV---------------IP-----------------------PKRTTYLFSATM 252
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + T+Y+ + L ++ K L+ LL + I
Sbjct: 253 TNKIEKLQRASLHNPVRVAV-STKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSII 311
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V R L G
Sbjct: 312 VFTRTVAHAQRTALLARILG 331
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L + R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLDTPQR-LFALVLTPTRE 102
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 103 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 143
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 144 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 199
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 200 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 223
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 224 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 282
Query: 353 NHFG 356
+ G
Sbjct: 283 RNLG 286
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 143/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 62 ACETMGYKAPTPIQ----RESIPLALKGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 116
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ F ++ ++G+ + VG + + L K+P
Sbjct: 117 FFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKPH-------- 168
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 169 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKI 215
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SAT++
Sbjct: 216 LKVL--PRERR-----TFL-------------------------------FSATMSSKVE 237
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ ++Y+ L L K K LYLV LL + I+FT +
Sbjct: 238 SLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRT 297
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 298 VNETQRLAFLLRALG 312
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 143/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 62 ACETMGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 116
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ F ++ ++G+ + VG + + L K+P
Sbjct: 117 FFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKPH-------- 168
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 169 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKI 215
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SAT++
Sbjct: 216 LKVL--PRERR-----TFL-------------------------------FSATMSSKVE 237
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ ++Y+ L L K K LYLV LL + I+FT +
Sbjct: 238 SLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRT 297
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 298 VNETQRLAFLLRALG 312
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 60/309 (19%)
Query: 48 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
IS + A+ +E+I L +D+ + TGSGKT ++ALPI+Q L + LV+
Sbjct: 104 ISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFALPILQALLEKQDHYF-GLVL 162
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
PTR+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 163 APTRELAYQISQQFEALGSLINVKCAVIVGGMDMTPQQIALAKKPH-------------- 208
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 227
I+VATPGRLMDH+ T+GF+L L YLV+DE DRLL + L +LQ+
Sbjct: 209 -------IIVATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDLDFGPILDKILQV--- 258
Query: 228 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 287
LP RR M+ SAT++ + L +
Sbjct: 259 ------------LPRE-------RRT----------------MLFSATMSTKLDNLTRAA 283
Query: 288 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
L P+ ++ + Y+ + L+ + K K +YLV L+ + CI+FT ++ T R
Sbjct: 284 LQSPVRVSISSSSYQTVKNLKQSYIFIPHKFKDIYLVYLVNEFAGQTCIIFTRTINETAR 343
Query: 348 LCTLLNHFG 356
+ LL G
Sbjct: 344 IAFLLRALG 352
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 53 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 109
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 110 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 150
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 151 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 206
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 207 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 230
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L +VF S+ +T R LL
Sbjct: 231 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMVFCSTCNNTQRTALLL 289
Query: 353 NHFG 356
+ G
Sbjct: 290 RNLG 293
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 103 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 143
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 144 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 199
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 200 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 223
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 224 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 282
Query: 353 NHFG 356
+ G
Sbjct: 283 RNLG 286
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQKESIPLALQGKDVIGLAETGSGKTGSFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L K+P +++
Sbjct: 110 SEQFEALGAGIGVKCAVVVGGIDMMTQALTLAKKPH---------------------VVI 148
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L+ L YLV+DE DR+L ++ + +L++ +
Sbjct: 149 ATPGRLVDHLENTKGFSLKALKYLVMDEADRILNMDFEEEVDKILRVIPRERH------- 201
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T+ KL + L P+ +
Sbjct: 202 TYL-------------------------------YSATMTKKVQKLQRASLKDPVKVEVS 230
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y L +K K +YLV LL L +VF S+ +T R LL + G
Sbjct: 231 -SKYQTVEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLG 288
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 66/316 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L +RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 67 ACATMGYKAPTPIQA----ESIPLALQDRDLIGLAETGSGKTAAFALPILQALMDKP-QS 121
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 122 FFGLVLAPTRELAFQISQSFEALGSTINVRCAVIVGGMDMVSQSIALGKKPH-------- 173
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 174 -------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKI 220
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 221 LKI---------------LPRE-------RRT----------------FLFSATMSSKVE 242
Query: 282 KLAQLDLHHPLFLTTGETRYK-LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
L + L +PL ++ +Y+ + L+SY+ I K K +YLV LL + I+FT
Sbjct: 243 SLQRASLSNPLRVSVSSNKYQTVSTLLQSYRFIPH-KHKDIYLVYLLNEFVGQSAIIFTR 301
Query: 341 SVESTHRLCTLLNHFG 356
+V T R+ LL G
Sbjct: 302 TVHETQRISFLLRALG 317
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 227 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 285
Query: 353 NHFG 356
+ G
Sbjct: 286 RNLG 289
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 227 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 285
Query: 353 NHFG 356
+ G
Sbjct: 286 RNLG 289
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 178 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 234
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 235 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKPH------------------- 275
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 276 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 331
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 332 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 355
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 356 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 414
Query: 353 NHFG 356
+ G
Sbjct: 415 RNLG 418
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 70 ACETLGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 124
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 125 LFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALGKKPH-------- 176
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 177 -------------IVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 223
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 224 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 245
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ ++Y+ L L K K LYLV LL + IVFT +
Sbjct: 246 SLQRASLSNPLRVSISSSKYQTVSTLLQSYLFIPHKYKDLYLVYLLNEYAGQSAIVFTRT 305
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 306 VNETQRLAILLRALG 320
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 143/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L++ PTR+LA Q+ F ++ ++G+ + VG + + L K+P
Sbjct: 121 FFGLILAPTRELAYQISKSFESLGASLGVRSCVIVGGMDMVSQSISLGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 173 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SAT++
Sbjct: 220 LKVL--PRERR-----TFL-------------------------------FSATMSSKVE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ ++Y+ L L K K LYLV LL + I+FT +
Sbjct: 242 SLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 302 VNETQRLAFLLRALG 316
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 18 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 74
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 75 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 115
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 116 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 171
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 172 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 195
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 196 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 254
Query: 353 NHFG 356
+ G
Sbjct: 255 RNLG 258
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 40 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 96
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 97 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 137
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 138 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVNPRDRK-- 193
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 194 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 217
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 218 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 276
Query: 353 NHFG 356
+ G
Sbjct: 277 RNLG 280
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 100 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 156
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 157 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 197
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 198 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 253
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 254 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 277
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 278 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 336
Query: 353 NHFG 356
+ G
Sbjct: 337 RNLG 340
>gi|241959124|ref|XP_002422281.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645626|emb|CAX40285.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 605
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 69/359 (19%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ P S + P + +K +L+ MG + F VQ++V + + +
Sbjct: 153 LDWLTKPQYASPQDKEPFTNFKLSSFMIK-SLEKMGFTEAFSVQISVLKMMLPEIEAQKL 211
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L QVK
Sbjct: 212 KPDRVG-DILVNASTGSGKTLAYSIPIIESLHRRVVPRVRAIILVPTKPLINQVKSTLLQ 270
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ L + SI DE +L+ R S DI+V+TPGRL
Sbjct: 271 LSSGTNLQIVALKNDISINDE-KDLLTR-------------------SVPDIIVSTPGRL 310
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+ + +L L YL++DE DRLL +++Q W +L
Sbjct: 311 VEHL-LSDSISLSSLQYLIIDEADRLLNQSFQNWSNVLLD-------------------- 349
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
K + + +K + K+V SATLT D KL+ L ++P + +++
Sbjct: 350 ----KIDTKINIAEVWK----LSVQKLVFSATLTTDAGKLSSLKFYNPRLVIVNDSKQLV 401
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL 352
+ +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL LL
Sbjct: 402 NEIFTVPMTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELL 460
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 136/296 (45%), Gaps = 61/296 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ +
Sbjct: 53 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQ 111
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + L K+P I++ATP
Sbjct: 112 FEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH---------------------IIIATP 150
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 151 GRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL 203
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
SAT+T+ KL + L +P+ ++
Sbjct: 204 -------------------------------FSATMTKKVQKLQRAALKNPVKCAV-SSK 231
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL + G
Sbjct: 232 YQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 287
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 147/329 (44%), Gaps = 68/329 (20%)
Query: 31 HLPCLD---PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
H+ LD P L A +G +Q A +I L RD+ + TGSGKT ++A
Sbjct: 11 HVMILDGIIPELIEACTTLGFKKPSDIQCA----SIPVALTGRDIIGLAQTGSGKTAAFA 66
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
LPI+QTL + L A V+ PTR+LA Q+ + F A+ +G+ + VG + +
Sbjct: 67 LPILQTLFANP-QHLYACVIAPTRELAFQISEQFEALGSVIGVRCAVIVGGMDMMSQSIA 125
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
L K+P +++ TPGRL+DH+ T+GF L+HL YLV+DE D
Sbjct: 126 LSKKPH---------------------VIICTPGRLVDHLENTKGFNLKHLKYLVMDEAD 164
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 267
RLL + A + VL++ + +T+L
Sbjct: 165 RLLDLDFGAEIEKVLKVIPRER-------NTYL--------------------------- 190
Query: 268 VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL 327
SAT+T KL + L +P+ + T+Y + L Y K K YL LL
Sbjct: 191 ----FSATMTSKVEKLQRASLVNPVKVEVA-TKYSTVDTLLQYYTFFPYKQKECYLTYLL 245
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
L + CIVFT + ST +L +L + G
Sbjct: 246 NELSGQTCIVFTLTCASTQKLALMLRNLG 274
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 136/296 (45%), Gaps = 61/296 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ +
Sbjct: 56 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQ 114
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + L K+P I++ATP
Sbjct: 115 FEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH---------------------IVIATP 153
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 154 GRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL 206
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
SAT+T+ KL + L +P+ ++
Sbjct: 207 -------------------------------FSATMTKKVQKLQRAALKNPVKCAV-SSK 234
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL + G
Sbjct: 235 YQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 290
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 43 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 99
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 100 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 140
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 141 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 196
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 197 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 220
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 221 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 279
Query: 353 NHFG 356
+ G
Sbjct: 280 RNLG 283
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPVALQGRDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQTTVIVGGIDTMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++ D +
Sbjct: 145 --VIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 74/335 (22%)
Query: 33 PCLDPRLKVALQNMGISSLF-----------PVQVAVWQETIGPGLFERDLCINSPTGSG 81
P L+ +++G++ + P ++ + E I L RD+ + TGSG
Sbjct: 16 PALEEEEAKTFKDLGVTDVLCEACDQLGWTKPTKIQI--EAIPLALQGRDIIGLAETGSG 73
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KT ++ALPI+ L R L ALV+ PTR+LA Q+ + F A+ ++G+ + VG
Sbjct: 74 KTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+ L K+P I++ATPGRL+DH+ T+GF L L YL
Sbjct: 133 MSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGFNLRALKYL 171
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DR+L ++ + +L++ D + TFL
Sbjct: 172 VMDEADRILNMDFETEVDKILKVIPRDRK-------TFL--------------------- 203
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 321
SAT+T+ KL + L +P+ ++Y+ E+L+ Y + SK K
Sbjct: 204 ----------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 322 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
YLV +L L ++F S+ +T R LL + G
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 287
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L + M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L +
Sbjct: 98 PELLETINEMKFTKPTPIQA----EAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWD 153
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A LV+ PTR+LA Q+K+ F A+ ++GL VG + D+ +L++RP
Sbjct: 154 -AQTPYFGLVLAPTRELAYQIKETFDALGSSMGLRTVCIVGGMDMMDQARDLMRRPH--- 209
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
ILVATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 210 ------------------ILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGP 251
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 252 ALDKILKVIPTQR-------TTYL-------------------------------FSATM 273
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + T+Y+ + L ++ K YL+ LL + I
Sbjct: 274 TSKVEKLQRASLHNPVKVAVS-TKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFVGKSII 332
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + + R L G
Sbjct: 333 VFTRTCAHSQRTSLLARILG 352
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|388580865|gb|EIM21177.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 581
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 170/379 (44%), Gaps = 71/379 (18%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
+ E + +P LP + E C +L D + A++ MG S + VQ
Sbjct: 30 ISEKEDTQLPELPETNTDYQDLTPEQCSFSNLDLTDG-TRSAIEEMGFSQMTEVQA---- 84
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQV 117
+TI P + RD+ + TGSGKTL++ +P ++ LS + A+V+ PTR+LALQ+
Sbjct: 85 KTIPPLMAGRDVLGAAHTGSGKTLAFLIPAIEMLSRLHFKPRNGTGAIVISPTRELALQI 144
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
V I + G+ +G ++ K EA +LQ V++++
Sbjct: 145 FGVAKDIMKNHNQTFGIIMGGAN-----------RKAEA----------DKLQKGVNLII 183
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF ++ L++DE DR+L ++ + ++++ ++N
Sbjct: 184 ATPGRLLDHLQNTKGFVFSNMKSLIIDEADRILEIGFEEEMRQIVKILPTENRQ------ 237
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTT 296
M+ SAT T LA++ L PL++
Sbjct: 238 -------------------------------TMLFSATQTTKVTDLARVSLRQGPLYINV 266
Query: 297 GETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
E R E+LE ++CES ++ L L L+ ++K IVF SS S LLN+
Sbjct: 267 HEERSAATNEQLEQGYVVCESDMRFLLLFTFLKKNLKKKVIVFFSSCNSVKYHGELLNY- 325
Query: 356 GELRIKIKEYSGLQRQSVR 374
+ I + + G Q+Q R
Sbjct: 326 --IDIPVLDLHGKQKQQKR 342
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 227 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 285
Query: 353 NHFG 356
+ G
Sbjct: 286 RNLG 289
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 144/320 (45%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 74 PELLEAIQQMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALW- 128
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A LV+ PTR+LA Q+K+ F A+ ++GL VG + D+ +L+++P
Sbjct: 129 EAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPH--- 185
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
ILVATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 186 ------------------ILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGP 227
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 228 ALDKILKIIPTQR-------TTYL-------------------------------FSATM 249
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + +Y+ + L ++ K YL+ LL + I
Sbjct: 250 TNKIAKLQRASLHNPVRVAVS-NKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSII 308
Query: 337 VFTSSVESTHRLCTLLNHFG 356
+FT + + R L G
Sbjct: 309 IFTRTCAHSQRTALLARILG 328
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 142/315 (45%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q E I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 70 ACEALGYKTPTPIQT----EAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QS 124
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ + F A+ + + + VG + + L K+P
Sbjct: 125 LFGLVLAPTRELAYQISEAFEALGSLISVRCAVIVGGMDMVPQAIALGKKPH-------- 176
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 177 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 223
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 224 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 245
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ ++Y+ L L K K +YLV LL + I+FT +
Sbjct: 246 SLQRASLSNPLRVSISSSKYQTVSTLLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRT 305
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 306 VNETQRLAILLRALG 320
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQYEAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P IL+
Sbjct: 103 SEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKP---------------------HILI 141
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L +LV+DE DR+L ++ + +L++
Sbjct: 142 ATPGRLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVI------------ 189
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR K +L SAT+T+ KL + L +P+ +
Sbjct: 190 ---------------------------PRERKTLLFSATMTKKVQKLQRASLRNPVKVEV 222
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL + G
Sbjct: 223 S-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLG 281
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 99 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 139
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 140 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 220 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 278
Query: 353 NHFG 356
+ G
Sbjct: 279 RNLG 282
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|325191409|emb|CCA26186.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 463
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D L A+ ++G S +Q QE I GL RDL + TGSGKT ++ +PI+Q+L
Sbjct: 36 VDATLCEAIASLGWSKPSKIQ----QEAIPHGLAGRDLIGLAETGSGKTGAFVIPILQSL 91
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
R+ + L ALV+ PTR+LA Q+ + F A+ ++GL VG + ++ L ++P
Sbjct: 92 L-RSPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQIALARKPH- 149
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I++ATPGRL+DH+ T+GF+L + +LV+DE DR+L +
Sbjct: 150 --------------------IIIATPGRLVDHLENTKGFSLRTIKFLVLDEADRMLSMDF 189
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + ++QL S+ +T+L SA
Sbjct: 190 EEEINQIVQLMPSER-------NTYL-------------------------------FSA 211
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L +P+ + ++ PE L + L +K K YL +L + +
Sbjct: 212 TMTSKVAKLQRASLLNPIKIEITH-KFATPENLRQHYLFIPAKFKDCYLSYILNEVAGQS 270
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
++F S+ T ++ +L + G
Sbjct: 271 ILIFASTCNGTQKVTLMLRNLG 292
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A N+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + +
Sbjct: 66 ACANLGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QA 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 121 FFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAIALGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +
Sbjct: 173 -------------VIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ F+P RR + SAT++
Sbjct: 220 LK---------------FIPRE-------RRT----------------FLFSATMSSKIE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P+ ++ +Y+ L Y L +LK YLV L +K +VFT +
Sbjct: 242 SLQRASLRDPVRVSISSNKYQTVSTLLQYYLFIPHQLKDTYLVYLANEFAGKKLVVFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 302 VSETQRLAILLRTLG 316
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 133/287 (46%), Gaps = 61/287 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ + F A+ ++G
Sbjct: 62 RDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQFEALGSSIG 120
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+ + VG + L K+P I++ATPGRL+DH+
Sbjct: 121 VQSAVIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLEN 159
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 160 TKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL--------- 203
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
SAT+T+ KL + L +P+ ++Y+ E+L+
Sbjct: 204 ----------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQ 240
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + SK K YLV +L L ++F S+ +T R LL + G
Sbjct: 241 YYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 287
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 142/315 (45%), Gaps = 65/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q QE I L +RD+ + TGSGKT ++ALP++Q L N
Sbjct: 60 ACEKLGFKTPTPIQ----QEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPF 115
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
A+V+ PTR+LA Q+ + F AI ++G+ + VG + + L K+P
Sbjct: 116 F-AVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPH-------- 166
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+LV TPGRLMDH+ T+GF+L++L YL++DE DRLL + + +
Sbjct: 167 -------------VLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKI 213
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ P+ R ++ SAT+T
Sbjct: 214 LKII-------------------------------------PHERRT-LLFSATMTSKVE 235
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + LH P+ + +++ + L L K K YLV L+ L I+F +
Sbjct: 236 KLQRASLHQPVRVAVS-SKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFART 294
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 295 VNDTQRLAILLRTLG 309
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 64 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 120
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 121 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 161
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 162 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT- 218
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
++ SAT+T+ KL + L +P+
Sbjct: 219 -------------------------------------LLFSATMTKKVQKLQRAALKNPV 241
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 242 KCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 300
Query: 353 NHFG 356
+ G
Sbjct: 301 RNLG 304
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 63/297 (21%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+ +
Sbjct: 47 EAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQISEQ 105
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + + L K+P IL+ATP
Sbjct: 106 FEALGSSIGVKCAVIVGGMDMMSQALILAKKP---------------------HILIATP 144
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF+L L +LV+DE DR+L ++ + +L++
Sbjct: 145 GRLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVI--------------- 189
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGET 299
PR K +L SAT+T+ KL + L +P+ + T
Sbjct: 190 ------------------------PRERKTLLFSATMTKKVQKLQRASLRNPVKVEVS-T 224
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL + G
Sbjct: 225 KYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLG 281
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQTAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P IL+
Sbjct: 103 SEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH---------------------ILI 141
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++
Sbjct: 142 ATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV------------- 188
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 189 --IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS 223
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL + G
Sbjct: 224 -TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLG 281
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 48 IQKEAIPLTLQGRDVIGLAETGSGKTGAFALPILQALLQNPQRYF-ALILTPTRELAFQI 106
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L K+P +++
Sbjct: 107 SEQFQALGSKIGVKTAVIVGGMDMMSQALLLAKKPH---------------------VII 145
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ L +LV+DE DR+L ++ + +L++
Sbjct: 146 ATPGRLVDHLENTKGFNLKALKFLVMDEADRILNMDFEVEVDKILKV------------- 192
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+TQ KL + LH P+ +
Sbjct: 193 --IPRE-------RRT----------------LLFSATMTQKVQKLQRASLHDPVKVEVS 227
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ ++L+ Y L K K +YLV+++ + ++F + +T R LL G
Sbjct: 228 -SKYQTVDKLQQYYLFIPVKFKDVYLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLG 285
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 141/307 (45%), Gaps = 65/307 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P ++ V E I L +DL + TGSGKT ++ALP +Q L S +V A V+ P
Sbjct: 33 PTKIQV--EAIPHALEGKDLIALAQTGSGKTAAFALPTLQALLQASVTSVPVFYACVLSP 90
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
TR+LA+Q+ + F A+ +GL + VG + + L KRP
Sbjct: 91 TRELAIQIAEQFEALGSDIGLRCAVLVGGVDMGLQTIALAKRP----------------- 133
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
I+V TPGRL+DH++ T+GF+L L YL++DE DRLL E ++ L +L + D
Sbjct: 134 ----HIVVGTPGRLLDHLSNTKGFSLRTLKYLILDEADRLLNEEFEKSLDEILTVISRDR 189
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ T+L SAT+T+ KL + L
Sbjct: 190 K-------TYL-------------------------------FSATMTKKVRKLQRACLR 211
Query: 290 HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 349
+P+ + ++Y + E L L C +K K YLV L +VFT + ++TH L
Sbjct: 212 NPVKIEVA-SKYSVVETLRQQLLFCPAKYKECYLVHALTLKSGASTMVFTRTCDATHFLA 270
Query: 350 TLLNHFG 356
+L + G
Sbjct: 271 LVLRNLG 277
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT +++LPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 52 IQREAIPVALEGRDVIGLAETGSGKTGAFSLPILQSLLDTPTR-LFALVLTPTRELAFQI 110
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L K+P +++
Sbjct: 111 SEQFEALGGRIGVKCAVVVGGVDMMTQALALAKKPH---------------------VVI 149
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L + YLV+DE DR+L + + +L++ E R
Sbjct: 150 ATPGRLVDHLENTKGFSLRSVKYLVMDEADRILNMDFGEEVDKILKVL--SRERR----- 202
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T+ KL + LH+P+ +
Sbjct: 203 TYL-------------------------------YSATMTKKVQKLQRASLHNPIKVEVS 231
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ ++L+ + SK K YLV++L +VF S+ +T R +L + G
Sbjct: 232 -TKYQTVDKLQQSYIFIPSKYKDCYLVSILNEFAGNSFMVFCSTCANTQRTAVMLRNLG 289
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYVFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 150/322 (46%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++++M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 130 LVPDLLESIESMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ A + ALV+ PTR+L Q+KD F A+ ++GL VG + D+ +L+++P
Sbjct: 186 WH-AQQPYFALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPH- 243
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
++VATPGR+MDH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 244 --------------------VIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDF 283
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L +L++ +P I+R + SA
Sbjct: 284 GPALDKILKV---------------IP--------IKRT---------------TYLFSA 305
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + LH+P+ + ++Y+ + L ++ K L+ LL +
Sbjct: 306 TMTNKIEKLQRASLHNPVRVAVS-SKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKS 364
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
IVFT +V R L G
Sbjct: 365 IIVFTRTVAHAQRTALLARILG 386
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 65/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +QV E+I L +DL + TGSGKT ++A+PI+Q L +
Sbjct: 96 ACENLGYKNPTSIQV----ESIPVALEGKDLIGLAETGSGKTAAFAIPILQALWDNPT-G 150
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A ++ PTR+LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 151 LFACILAPTRELAFQISEQFEALGGGIGVRSAVIVGGMDMMTQSVALGKKPH-------- 202
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
ILVATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 203 -------------ILVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKI 249
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + RR + SAT+T
Sbjct: 250 LKV----------------------IPQTRRT----------------YLFSATMTSKVE 271
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L P+ ++ G ++Y L L K K YLV L+ + I+F +
Sbjct: 272 KLQRASLSSPVRISVG-SKYSTVSTLIQKFLFIPFKHKDTYLVYLMNEFAGQTTIIFCRT 330
Query: 342 VESTHRLCTLLNHFG 356
V+ T RL LL H G
Sbjct: 331 VQETSRLAILLRHLG 345
>gi|389638234|ref|XP_003716750.1| ATP-dependent RNA helicase dbp6 [Magnaporthe oryzae 70-15]
gi|351642569|gb|EHA50431.1| ATP-dependent RNA helicase dbp6 [Magnaporthe oryzae 70-15]
gi|440465157|gb|ELQ34497.1| ATP-dependent RNA helicase dbp6 [Magnaporthe oryzae Y34]
gi|440489693|gb|ELQ69322.1| ATP-dependent RNA helicase dbp6 [Magnaporthe oryzae P131]
Length = 896
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 170/390 (43%), Gaps = 103/390 (26%)
Query: 14 WMRSPVDVSLFEDCPLDHLP-----CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
W++SP+ VS L + P + L G F VQ A +
Sbjct: 281 WLQSPLYVSSGTQAEWASLGLRPELGISPEIASQLALKGYPGAFAVQTAAIPRLLPRPDR 340
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
+ DL I++ TGSGKTL+Y LP+++ +S AV LRAL+V+PTR+L QV +V A A
Sbjct: 341 QGDLVISAATGSGKTLAYVLPMIRDISLGAVTKLRALIVVPTRELVQQVHEVCNICAAAY 400
Query: 129 G-------LSVGLAVGQSSIADEISELIKRPKLEAGICYDPE------------------ 163
+ +G AVG + E +L+ + + YDPE
Sbjct: 401 ARQPNRKTVRIGTAVGNQAFKKEQEKLMDKDRR-----YDPEGYARLVQSRQWENVRKQD 455
Query: 164 -------------------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+ + L S VDIL+ TPGRL++HI T GF L+++ +LVVD
Sbjct: 456 IDDPSFDMFELAETPLPLVNHVDHLVSKVDILICTPGRLVEHIERTPGFNLDYVRWLVVD 515
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E D+LL ++YQ WL V++ L T + + F++K
Sbjct: 516 EADKLLEQSYQQWLDVVME----------------------KLSTNKPGCRDFMFQNKSG 553
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLHHPLFL-----------TTGETR--YKLPERLESYK 311
R K++LSAT+T++ + L +L+L P + +G T + SY+
Sbjct: 554 VR--KVILSATMTRNVSLLNKLNLRRPEMIVLESVTAVPTSASGPTTDIAGVSAEASSYE 611
Query: 312 LICESKL------------KPLYLVALLQS 329
L S+L KP+YLV LL S
Sbjct: 612 LALPSQLLEFAIKVRDPEQKPMYLVDLLSS 641
>gi|363749669|ref|XP_003645052.1| hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888685|gb|AET38235.1| Hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
Length = 620
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 159/317 (50%), Gaps = 64/317 (20%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
D+ +N+ TGSGKTL+Y++PIV LS R V LRA++++PT+ L QV + ++ L
Sbjct: 225 DILVNASTGSGKTLAYSIPIVHILSKRIVNRLRAIILVPTKLLIQQVYETILTLSQGTSL 284
Query: 131 SVGLAVGQSSIADEISEL-IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+ ++ S+ +E +L K P DIL+ TPGRL+DH++
Sbjct: 285 IINVSRLDKSLKEEHLKLQSKEP---------------------DILIVTPGRLVDHLHM 323
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
+ F+L++L +L++DE DRLL +++Q W ++
Sbjct: 324 S-TFSLQNLKFLILDEADRLLNQSFQNWCSELM--------------------------- 355
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-ETRYKLPERLE 308
+E DK ++KM+ SATLT + KL +L LH+P +T G E Y +P+ L+
Sbjct: 356 ---TKIEAEKLDKNPGNILKMIFSATLTTNTEKLHELMLHNPKLITMGTEKLYNMPKLLQ 412
Query: 309 SYKL---ICESKLKPLYLVALLQSLG--EEKCIVFTSSVESTHRLCTLLN-----HFGEL 358
+ + +S KPL L+ LL +L + + +VF S +++ RL +LL H G
Sbjct: 413 EFNIPIPTAKSHKKPLILLRLLSTLQAPDLRVLVFVKSNDASIRLSSLLQIMINRHLGTD 472
Query: 359 RIKIKEYSGLQRQSVRR 375
I++ + +++ +
Sbjct: 473 SIEVASINNNNSKALNK 489
>gi|68473005|ref|XP_719308.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|46441121|gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|238880344|gb|EEQ43982.1| ATP-dependent rRNA helicase RRP3 [Candida albicans WO-1]
Length = 399
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +D+ + TGSGKT ++A+PI+Q+L + A + ALV+ PTR+LA Q+
Sbjct: 9 IQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWH-AQQPYFALVLAPTRELAFQI 67
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
KD F A+ ++GL VG + D+ +L+++P ++V
Sbjct: 68 KDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPH---------------------VIV 106
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++
Sbjct: 107 ATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKV------------- 153
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P I+R + SAT+T KL + LH+P+ +
Sbjct: 154 --IP--------IKRT---------------TYLFSATMTNKIEKLQRASLHNPVRVAV- 187
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ + L ++ K L+ LL + IVFT +V R L G
Sbjct: 188 SSKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILG 246
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 65/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +Q+ E + L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 52 ACDQLGWKSPTKIQI----EAVPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 106
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 107 LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH-------- 158
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I++ATPGRL+DH+ T+GFTL L +LV+DE DR+L ++ + +
Sbjct: 159 -------------IVIATPGRLIDHLENTKGFTLRALKFLVMDEADRILNMDFETEVDKI 205
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SAT+T+
Sbjct: 206 LKVI--PRERR-----TFL-------------------------------FSATMTKKVQ 227
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L P+ T+Y ++L+ Y + SK K YLV++L L I+F S+
Sbjct: 228 KLQRAALKDPVKCAVS-TKYSTVDKLQQYYIFIPSKYKDCYLVSILNDLAGNSFIIFCST 286
Query: 342 VESTHRLCTLLNHFG 356
+ R+ LL + G
Sbjct: 287 CNNAQRVALLLRNLG 301
>gi|344232268|gb|EGV64147.1| hypothetical protein CANTEDRAFT_122357 [Candida tenuis ATCC 10573]
Length = 563
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 159/359 (44%), Gaps = 66/359 (18%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER- 70
L W+ P+ P + D +K L G F VQV V + + +
Sbjct: 113 LDWLSKPIYSKPEHTWPFETFDLSDT-MKSNLATGGFIDAFSVQVTVLEMMLKDTKENKL 171
Query: 71 ------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L QVK +
Sbjct: 172 KPDSNGDILVNASTGSGKTLAYSIPIIESLCTRVVPRVRAIILVPTKPLVSQVKQTLLQL 231
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
+ L V SI +E +L P DI+V+TPGRL+
Sbjct: 232 SKGTSLYVMNLRNDISIREEAEKLTGNPP--------------------DIIVSTPGRLV 271
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
+H+ L L YLV+DE DRLL +++Q W +++ +
Sbjct: 272 EHVTGN-SIDLNSLRYLVIDEADRLLGQSFQNWSRVLVERLEA----------------- 313
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR--- 300
++ + +K R+ K+V SATLT D KLA L + P L + E +
Sbjct: 314 ------KQSSMVESWK----LRVQKLVFSATLTTDAGKLAMLHFYKPRLVIVNDEEKLVN 363
Query: 301 --YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN 353
+ P L + L +S LKPL L L++S +VFT S E++ RL LL+
Sbjct: 364 EMFSTPRTLSEFTLQFSSNKSSLKPLILAKFLMKSNKLSNVLVFTKSNEASIRLSKLLS 422
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TG GKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGPGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFG 356
+ G
Sbjct: 284 RNLG 287
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++A+P++Q+L A R L LV+ PTR+
Sbjct: 102 PTKIQI--EAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLLACAQR-LHTLVLTPTRE 158
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 159 LAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPH------------------- 199
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L +++ + +L++ D
Sbjct: 200 --VVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRR-- 255
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 256 -----TFL-------------------------------FSATMTKKVQKLQRAALQDPV 279
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ ++Y ++L+ + + SK K YLV++L L +VF + +T R+ LL
Sbjct: 280 KCSVS-SKYATVDKLQQFYIFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLL 338
Query: 353 NHFG 356
+ G
Sbjct: 339 RNLG 342
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q+L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDVIGLAETGSGKTAAFALPILQSLLENPQRYF-ALILTPTRELAFQI 103
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ A+ +G+ + VG + + L K+P IL+
Sbjct: 104 SEQIEALGANIGVKCAVIVGGMDMMSQALILAKKPH---------------------ILI 142
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ L YLV+DE DR+L ++ + +L++ +
Sbjct: 143 ATPGRLLDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKILKVIPRERH------- 195
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 196 TFL-------------------------------FSATMTKKVKKLQRACLRDPVKVEVS 224
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L + ++F S+ +T R LL + G
Sbjct: 225 -TKYQTVEKLQQYYIFIPVKFKDVYLVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLG 282
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +++G S P+Q QE+I P L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 73 ACESLGYKSPTPIQ----QESIPPALAGRDLIGLAETGSGKTAAFALPILQALLDKP-QP 127
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ F + + + + VG + + L K+P
Sbjct: 128 LFGLVLAPTRELAYQISKSFEGLGILISVRCAVIVGGMDMVTQSIALGKKPH-------- 179
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 180 -------------IIVATPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFGPILDKI 226
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 227 LKV---------------LPRE-------RRT----------------YLFSATMSSKVE 248
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL + +Y+ L L K YL+ LL + IVFT +
Sbjct: 249 SLQRASLRDPLRVQISTNKYQTVSTLLQSYLFIPHPHKDTYLIYLLNDFAGQSAIVFTRT 308
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 309 VNETQRLAILLRTLG 323
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 65 IQRESIPVALQGKDIIGLAETGSGKTAAFALPILQALLENPQRHF-ALILTPTRELAFQI 123
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L K+P I++
Sbjct: 124 SEQFEALGSGIGVKSIVIVGGLDMTSQALMLAKKPH---------------------III 162
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH++ T+GF L L +LV+DE DR+L ++A + +L++ +
Sbjct: 163 ATPGRLVDHLSNTKGFNLRALKFLVMDEADRILNMDFEAEVDKILKVIPRERR------- 215
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ NKL + L P+ +
Sbjct: 216 TFL-------------------------------FSATMTKKVNKLQRACLQDPVRVEVS 244
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L Y + +K K +YLV +L +VF S+ +T R LL + G
Sbjct: 245 -TKYQTVEKLLQYYVFIPAKFKDVYLVHILNENAGNSFMVFCSTCNNTIRTALLLRNLG 302
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 70/336 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
++Q++ +S P+Q + TI L +D+ + TGSGKT +Y +P+++ L +
Sbjct: 139 SIQSLSFTSPTPIQSS----TIPIALLGKDIVAGAQTGSGKTAAYLIPLIERLIFKNATS 194
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
+A+++ PTR+LA+QV DV + V LS GLAVG ++ + +L RP
Sbjct: 195 TKAIILTPTRELAIQVYDVGKKLGQFVKNLSFGLAVGGLNLRQQEQQLKSRP-------- 246
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
DI++ATPGRL+DHI + F++E + LV+DE DR+L E +Q L
Sbjct: 247 -------------DIVIATPGRLIDHIRNSPSFSVEDVQVLVIDEADRMLEEGFQEELTE 293
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
+L L P + ++ SAT+
Sbjct: 294 ILSLI-------------------------------------PKQKRQTLLFSATMNTKV 316
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESY--KLICESKLKPLYLVALLQSLGEEKCIVF 338
L QL L+ P+ + + + RLE ++ LKP L LL+ L + + +VF
Sbjct: 317 QDLVQLSLNKPVRVMIDPPKT-VASRLEQQFVRIRKRENLKPALLFQLLRKL-DGRIVVF 374
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S E H+L +L G L +K+ E G Q R
Sbjct: 375 VSRKEMAHKLRVIL---GLLGLKVAELHGALTQEQR 407
>gi|410076008|ref|XP_003955586.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
gi|372462169|emb|CCF56451.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
Length = 496
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 71/343 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ MG + + PVQ TI P + RD+ + TGSGKTL++ LP ++ L +
Sbjct: 44 PTLK-AIDKMGFTKMTPVQA----RTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHS 98
Query: 97 RAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
+ +V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 99 LKFKPRNGTGVIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLMK--- 155
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
V+IL+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 156 ------------------GVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIG 197
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
++ + ++++ NE+R S M+ S
Sbjct: 198 FEDEMRQIIKIL--PNEDRQS-----------------------------------MLFS 220
Query: 274 ATLTQDPNKLAQLDLHH-PLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
AT T LA++ L PLF+ E + LE ++CES + L L + L+
Sbjct: 221 ATQTTKVEDLARISLRKGPLFINVVSEKDSSTADGLEQGYVVCESDKRFLLLFSFLKRNQ 280
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 281 KKKIIVFLSSCNSVKYHAELLNY---IDLPVLELHGKQKQQKR 320
>gi|58263404|ref|XP_569112.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108568|ref|XP_777235.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818214|sp|P0CQ85.1|HAS1_CRYNB RecName: Full=ATP-dependent RNA helicase HAS1
gi|338818215|sp|P0CQ84.1|HAS1_CRYNJ RecName: Full=ATP-dependent RNA helicase HAS1
gi|50259920|gb|EAL22588.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223762|gb|AAW41805.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 607
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 71/356 (19%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
+E P L L P A++ MG ++ VQ TI P L +D+ + TGSGKT
Sbjct: 126 YERVPFSTL-NLSPPTTAAIERMGFETMTEVQA----RTIPPLLAGKDVLGAARTGSGKT 180
Query: 84 LSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
+++ +P V+ LS + V +++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 181 MAFLIPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVLMGGAN 240
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L+K V+++VATPGRL+DH+ T+GF ++L
Sbjct: 241 RKAEADKLVK---------------------GVNLIVATPGRLLDHLQNTKGFVFKNLKA 279
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + +++L S+N
Sbjct: 280 LVIDEADRILEIGFEEEMKQIIKLLPSENRQ----------------------------- 310
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKL 318
M+ SAT T LA++ L PL++ ET+ + LE ++CES
Sbjct: 311 --------SMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQ 362
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 363 RFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 415
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 151/322 (46%), Gaps = 67/322 (20%)
Query: 38 RLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--- 94
+L A N+G + +Q+ E+I L +DL + TGSGKT ++ALPI+Q+L
Sbjct: 19 QLVTACDNLGWKNPTKIQI----ESIPHALEGKDLIGLAQTGSGKTGAFALPILQSLLEA 74
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
S ++V+ A V+ PTR+LA+Q+ + F A+ +G+ + VG + + L KRP
Sbjct: 75 SEKSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGGVDMVQQSIALGKRP-- 132
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+VATPGRL+DH++ T+GF+L L YLV+DE DRLL E +
Sbjct: 133 -------------------HIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF 173
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ L +L++ + TFL SA
Sbjct: 174 EKSLDEILKVIPRERR-------TFL-------------------------------FSA 195
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T+ KL + L +P+ + ++Y + L+ +K K YLV +L
Sbjct: 196 TMTKKVKKLQRACLRNPVKIEAA-SKYSTVDTLKQEYRFIPAKYKDCYLVYILTEKSGST 254
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
+VFT + ++T L +L + G
Sbjct: 255 SMVFTRTCDATTFLALVLRNLG 276
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 136/304 (44%), Gaps = 62/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ F A+ + + + VG + + L K+P
Sbjct: 128 LAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPH------------------- 168
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++
Sbjct: 169 --IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV-------- 218
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
LP RR + SAT++ L + L +PL
Sbjct: 219 -------LPKE-------RRT----------------YLFSATMSSKVESLQRASLSNPL 248
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++ +Y+ L LI K K +YL+ LL + IVFT +V T RL LL
Sbjct: 249 RVSVSSNKYQTVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIVFTRTVNETQRLANLL 308
Query: 353 NHFG 356
G
Sbjct: 309 RALG 312
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L++ PTR+LA Q+ F ++ + + + VG + + L K+P
Sbjct: 121 FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 173 -------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 220 LKV---------------LPRE-------RRT----------------FLFSATMSSKVE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +
Sbjct: 242 SLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 302 VHETQRISFLLRSLG 316
>gi|405118333|gb|AFR93107.1| ATP-dependent RNA helicase HAS1 [Cryptococcus neoformans var.
grubii H99]
Length = 544
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 164/358 (45%), Gaps = 71/358 (19%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
+++E P L L P A++ MG ++ VQ TI P L +D+ + TGSG
Sbjct: 61 TVYERVPFSTL-NLSPPTTAAIERMGFETMTEVQA----RTIPPLLAGKDVLGAARTGSG 115
Query: 82 KTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KT+++ +P V+ LS + V +++ PTR+LALQ+ V + + G+ +G
Sbjct: 116 KTMAFLVPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFGVLMGG 175
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
++ E +L+K V+++VATPGRL+DH+ T+GF ++L
Sbjct: 176 ANRKAEADKLVK---------------------GVNLIVATPGRLLDHLQNTKGFVFKNL 214
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ + +++L S ENR S
Sbjct: 215 KALVIDEADRILEIGFEEEMKQIIKLLPS--ENRQS------------------------ 248
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICES 316
M+ SAT T LA++ L PL++ ET+ + LE ++CES
Sbjct: 249 -----------MLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCES 297
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 298 DQRFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 352
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 61/287 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
+D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q+ + F A+ ++G
Sbjct: 56 KDVIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQISEQFEALGSSIG 114
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+ + VG + + L K+P IL+ATPGRL+DH+
Sbjct: 115 VKCAVIVGGMDMMSQALLLAKKPH---------------------ILIATPGRLVDHLEN 153
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF L L +LV+DE DR+L ++ + +L++ +P
Sbjct: 154 TKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV---------------IPRE------ 192
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
RR ++ SAT+T+ KL + L +P+ + T+Y+ E+L+
Sbjct: 193 -RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQ 234
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + K K +YLV +L L ++F ++ +T R LL + G
Sbjct: 235 YYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLG 281
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 61/296 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q+ +
Sbjct: 52 EAIPLTLEGKDIIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQISEQ 110
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + + L K+P IL+ATP
Sbjct: 111 FEALGSSIGVKCAVIVGGMDMMSQALLLAKKPH---------------------ILIATP 149
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++ +
Sbjct: 150 GRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV---------------I 194
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
P RR ++ SAT+T+ KL + L +P+ + T+
Sbjct: 195 PRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS-TK 230
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL + G
Sbjct: 231 YQTVEKLQQYYVFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLG 286
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ QE I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 103 SEQFDALGSSIGVKTVVLVGGMDMHAQGMILEKKPH---------------------III 141
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++
Sbjct: 142 ATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRV------------- 188
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 189 --IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS 223
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F + +T R LL + G
Sbjct: 224 -TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLG 281
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 65/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +Q+ E I L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 51 ACDQLGWKSPTKIQI----EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 105
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 106 LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH-------- 157
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+++ATPGRL+DH+ T+GF+L L +LV+DE DR+L ++ + +
Sbjct: 158 -------------VVIATPGRLIDHLENTKGFSLRALKFLVMDEADRILNMDFETEVDKI 204
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SAT+T+
Sbjct: 205 LKVI--PRERR-----TFL-------------------------------FSATMTKKVQ 226
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L P+ T+Y ++L+ Y + SK K YLV++L L I+F S+
Sbjct: 227 KLERAALKDPVKCAV-STKYSTVDKLQQYYIFIPSKYKDCYLVSILNELAGNSFIIFCST 285
Query: 342 VESTHRLCTLLNHFG 356
+ R+ LL + G
Sbjct: 286 CNTAQRVALLLRNLG 300
>gi|301119991|ref|XP_002907723.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 479
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 151/322 (46%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D + A++ +G S+ +Q Q+ I GL +D+ + TGSGKT ++ +PI+Q+L
Sbjct: 35 VDSAICEAIEAVGWSAPSKIQ----QQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQSL 90
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ R L ALV+ PTR+LA Q+ + F A+ ++GL VG + + L ++P
Sbjct: 91 LHNPQR-LYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPH- 148
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
+++ATPGRL+DH+ T+GF+L + +LV+DE DR+L +
Sbjct: 149 --------------------VVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDF 188
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + ++QL +D +T+L SA
Sbjct: 189 EEEINQIVQLMPADR-------NTYL-------------------------------FSA 210
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L P+ + ++ PE L+ + L +K K YL +L + +
Sbjct: 211 TMTSKVRKLQRASLKDPVKVEITH-KFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQS 269
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
++F S+ T ++ +L + G
Sbjct: 270 VLIFASTCNGTQKVTLMLRNLG 291
>gi|366994590|ref|XP_003677059.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
gi|342302927|emb|CCC70704.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
Length = 508
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 71/343 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A++ MG ++L PVQ TI P + RD+ + TGSGKTL++ +P ++ L +
Sbjct: 54 PTLK-AIEKMGFTTLTPVQA----RTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLHS 108
Query: 97 RAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
+ +V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 109 LKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLMK--- 165
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
V++L+ATPGRL+DH+ T+GF ++L L++DE DR+L
Sbjct: 166 ------------------GVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIG 207
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
++ + ++++ NE+R S M+ S
Sbjct: 208 FEDEMKQIIKIL--PNEDRQS-----------------------------------MLFS 230
Query: 274 ATLTQDPNKLAQLDLHH-PLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
AT T LA++ L PLF+ E + LE ++C+S + L L + L+
Sbjct: 231 ATQTTKVEDLARISLRKGPLFINVASEDNTSTADGLEQGYVVCDSDKRFLLLFSFLKRNQ 290
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 291 KKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 330
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L++ PTR+LA Q+ F ++ + + + VG + + L K+P
Sbjct: 121 FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 173 -------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 220 LKV---------------LPRE-------RRT----------------FLFSATMSSKVE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +
Sbjct: 242 SLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 302 VHETQRISFLLRSLG 316
>gi|403215528|emb|CCK70027.1| hypothetical protein KNAG_0D02780 [Kazachstania naganishii CBS
8797]
Length = 476
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 158/343 (46%), Gaps = 71/343 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P +K A++ MG + + VQ + TI P L +D+ + TGSGKTL++ +P ++TL
Sbjct: 19 PTMK-AIEKMGFTKMTTVQ----ERTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIETLHA 73
Query: 97 RAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
+ +V+ PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 74 LKFKPRNGTGVIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLAK--- 130
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
V+IL+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 131 ------------------GVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIG 172
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
++ + ++++ NE R S M+ S
Sbjct: 173 FEDEMKQIIRIL--PNEERQS-----------------------------------MLFS 195
Query: 274 ATLTQDPNKLAQLDLHH-PLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
AT T LA++ L PLF+ ET + + LE ++CES + L L + L+
Sbjct: 196 ATQTTKVEDLARISLRKGPLFINVVPETDHSTADGLEQGYVVCESDKRFLLLFSFLKRNQ 255
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 256 KKKVIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 295
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 67/316 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +NMG + P+Q + I L RD+ + TGSGKT ++ALP++Q L A +
Sbjct: 60 ACENMGYKAPTPIQ----SQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALME-APQT 114
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ F + +G+ + VG + + L K+P
Sbjct: 115 LFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPH-------- 166
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YL +DE DRLL + L +
Sbjct: 167 -------------IIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKI 213
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDP 280
+++ PR L SAT++
Sbjct: 214 IRI---------------------------------------LPRTRHTYLFSATMSTKV 234
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
L + L +P+ ++ ++Y+ L+S + K K LYLV LL + I+FT+
Sbjct: 235 ESLQRASLSNPVRVSV-SSKYQTVSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTT 293
Query: 341 SVESTHRLCTLLNHFG 356
+V T R+ +L G
Sbjct: 294 TVHETQRVAFMLRALG 309
>gi|260941344|ref|XP_002614838.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
gi|238851261|gb|EEQ40725.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
Length = 748
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 157/351 (44%), Gaps = 85/351 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK L ++G + P+Q A +I L +D+ + TGSGKT +Y +PI++ L
Sbjct: 246 PVLK-GLASLGYTKPSPIQSA----SIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLY 300
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPK 153
+ V R +++ PTR+LA+QV DV I V L+ GLAVG ++ + +L RP
Sbjct: 301 KSSKVASTRVVILTPTRELAIQVCDVGKKIGRYVNNLTFGLAVGGLNLRQQEQQLKTRP- 359
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI+VATPGRL+DHI + F+L+ L LV+DE DR+L E
Sbjct: 360 --------------------DIVVATPGRLIDHIRNSASFSLDALEILVMDEADRMLEEG 399
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L +L L P + M+ S
Sbjct: 400 FQVELTEILTLI-------------------------------------PKHKRQTMLFS 422
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L QL L+ P+ + P + + KL+ E ++KP L L
Sbjct: 423 ATMNTKIQDLIQLSLNKPVRIMID------PPKAAANKLVQEFVRIRKKDEMKPALLYYL 476
Query: 327 LQSLG---EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+S+ + + +VF S E+ HRL +L G L +K+ E G Q R
Sbjct: 477 LKSVDPSQQSRIVVFVSRKETAHRLRIIL---GLLGMKVSELHGSLTQEQR 524
>gi|449017342|dbj|BAM80744.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 592
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 83/344 (24%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTL-SNRAVRC 101
++ I+ LFP Q V L D+ + +PTGSGKTL YAL ++ L S+ ++ C
Sbjct: 73 RDYAITHLFPFQKEVLAYIRSTALTHSGDVLLGAPTGSGKTLIYALAVLLDLYSSASLFC 132
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
+RALVVLPTR+LA QV+ +F + + LS +AV +S L +R
Sbjct: 133 VRALVVLPTRELARQVEGIFRTLTASAKLSARVAV--------LSLLRERV--------- 175
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
P L Q+ + + TPGRL++ ++ L L +LV+DE DRL R++YQ WL +
Sbjct: 176 PRSDLLNRQA---VCITTPGRLVEALD-RHELLLADLRWLVIDEADRLFRQSYQNWLERL 231
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
LQ R R D P RL K++ SAT T+D
Sbjct: 232 LQ----------------------------RIDCARRVLDPPLRRLRKLLFSATQTRDAT 263
Query: 282 KLAQLDLHHPLFL-----TTG-----ETRYKLPERLESYKLIC-------ESKLKPLY-- 322
LA L LHHP++L T G + R L +++ + +C E KL+ L
Sbjct: 264 HLAALRLHHPVYLLCHASTEGARQPSKLRRGLMDQVPAGLTLCSLRFLSEEDKLRFLLRL 323
Query: 323 ------LVALLQSLGEE-------KCIVFTSSVESTHRLCTLLN 353
++A L+ ++ + ++F SVE+THRLC +
Sbjct: 324 IVCGPDILATLRDPSDQSSRPDHNRMLIFVKSVETTHRLCRFVQ 367
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 62/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ F A+ + + + VG + + L K+P
Sbjct: 128 LAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPH------------------- 168
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++
Sbjct: 169 --IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV-------- 218
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
LP RR + SAT++ L + L +PL
Sbjct: 219 -------LPKE-------RRT----------------YLFSATMSSKVESLQRASLSNPL 248
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++ +Y+ L LI K K +YL+ LL + I+FT +V T RL LL
Sbjct: 249 RVSVSSNKYQTVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILL 308
Query: 353 NHFG 356
G
Sbjct: 309 RALG 312
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ QE I L +D+ + TGSGKT ++ALPI+Q L + R AL++ PTR+LA Q+
Sbjct: 21 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLEQPQRYF-ALILTPTRELAFQI 79
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 80 SEQFDALGSSMGVKTVVLVGGMDMHAQGMILEKKPH---------------------III 118
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++
Sbjct: 119 ATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRV------------- 165
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 166 --IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVRVEVS 200
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F + +T R LL + G
Sbjct: 201 -TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLG 258
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 62/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ F A+ + + + VG + + L K+P
Sbjct: 128 LAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPH------------------- 168
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++
Sbjct: 169 --IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV-------- 218
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
LP RR + SAT++ L + L +PL
Sbjct: 219 -------LPKE-------RRT----------------YLFSATMSSKVESLQRASLSNPL 248
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++ +Y+ L LI K K +YL+ LL + I+FT +V T RL LL
Sbjct: 249 RVSVSSNKYQTVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILL 308
Query: 353 NHFG 356
G
Sbjct: 309 RALG 312
>gi|324510572|gb|ADY44421.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 560
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 169/394 (42%), Gaps = 82/394 (20%)
Query: 14 WMRS----PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG--- 66
W++S P D+S LD + L P L L+N I FPVQ +V I
Sbjct: 77 WIKSGTNFPADLSNENLAELDAVSGLHPSLMETLKN-NIKKWFPVQHSVLPHLIAESKCA 135
Query: 67 --LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
L RDL I++PTGSGKTL Y LPI+ +LS A + AL+V P ++L Q++ F
Sbjct: 136 SILPPRDLAISAPTGSGKTLCYILPILNSLSYTAAPSIHALIVAPVQNLVTQIEAEFKKF 195
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
A G+ L G + E +L ++ ATPGRLM
Sbjct: 196 -DAFGIQTALLCGNHDVNAERRQL----------------------KTARVVFATPGRLM 232
Query: 185 DH-INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
+H ++ + HL YL++DE DR+ + A WL + Q + L
Sbjct: 233 EHLVDPVSHMDVSHLRYLIIDEADRMSQTARLEWLDALEQ-------------AAHLTGG 279
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYK 302
+ S+ + L K+++SATL++D KL L +P LF + E +
Sbjct: 280 WTSVDDLLSV-----------RHLQKILVSATLSRDVEKLHTWKLRYPRLFKASAEYSEE 328
Query: 303 ------------------LPERLESYKLICESKLKPLYLVALLQSLGEEKCI-VFTSSVE 343
LP L + +ICE ++KPL L +Q + K I VF ++
Sbjct: 329 VKNAMSIADVDQIEGAALLPSSLSHHVVICELRMKPLALYVEVQDKPQWKRILVFANNKL 388
Query: 344 STHRLCTLLNHFGELRIKIKEYS----GLQRQSV 373
++ RL LL +++E S G +RQ V
Sbjct: 389 ASRRLAILLKVLSADVYRVEELSSNLFGRRRQKV 422
>gi|448528530|ref|XP_003869731.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis Co 90-125]
gi|380354084|emb|CCG23598.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis]
Length = 632
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 70/336 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
++Q++ +S P+Q + TI L +D+ + TGSGKT +Y +P+++ L +
Sbjct: 167 SIQSLSFTSPTPIQSS----TIPIALLGKDIVAGAQTGSGKTAAYLIPLIERLIFKNSTS 222
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
+A+++ PTR+LA+QV DV + V LS GLAVG ++ + +L RP
Sbjct: 223 TKAIILAPTRELAIQVYDVGRKLGQFVKNLSFGLAVGGLNLRQQEQQLKSRP-------- 274
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
DI++ATPGRL+DHI + F++E + LV+DE DR+L E +Q L
Sbjct: 275 -------------DIVIATPGRLIDHIRNSPSFSVEDVQVLVIDEADRMLEEGFQEELTE 321
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
+L L P + ++ SAT+
Sbjct: 322 ILSLI-------------------------------------PKQKRQTLLFSATMNTKV 344
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESY--KLICESKLKPLYLVALLQSLGEEKCIVF 338
L QL L+ P+ + + + RLE ++ LKP L LL+ L + + +VF
Sbjct: 345 QDLVQLSLNKPVRVMIDPPKT-VASRLEQQFVRIRKRESLKPALLFQLLRKL-DGRIVVF 402
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S E H+L +L G L +K+ E G Q R
Sbjct: 403 VSRKEMAHKLRVIL---GLLGLKVAELHGALTQEQR 435
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 57/299 (19%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +I P L RD+ + TGSGKT ++++P++ L + R + A+++ PTR+LA Q+
Sbjct: 80 IQASSIPPALEGRDVIGLAETGSGKTGAFSIPVLNYLLEKPQRSVFAVILAPTRELAFQI 139
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+V AA+ +G S VG +A + L + P ++V
Sbjct: 140 HEVVAALGSGMGASSVCVVGGVDMASQAIALARNPH---------------------VVV 178
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L + YLV+DE DR+L ++ + +L++
Sbjct: 179 ATPGRLLDHLQNTKGFHLRQIKYLVLDEADRMLSMDFEREINEILEV------------- 225
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P G +T M+ SAT+T KL + L P+ +
Sbjct: 226 --IPDHEGGRRT--------------------MLFSATMTSKVEKLQRASLVDPVRVEV- 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+++ P++L L +K K YL L+ + +VF ++ + RL +L + G
Sbjct: 263 STKFQTPKKLLQSYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLG 321
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 59/288 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALP++Q L + R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALTGRDVIGLAETGSGKTGAFALPVLQALLEKPQR-LFALILTPTRELAYQI 114
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F + ++G+ G+ VG + + L K+P I+V
Sbjct: 115 SETFEKLGKSIGIKCGVLVGGMDMMSQALVLGKKPH---------------------IIV 153
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L YL++DE DR+L ++ + +L
Sbjct: 154 ATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKIL--------------- 198
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+ LP G R+ M+ SAT+T+ KL + L +P+ +
Sbjct: 199 SSLPRGEG-----RK----------------NMLFSATMTKKVAKLQRASLQNPVRVEVS 237
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 345
++Y+ ++L Y L K K +YLV ++ L I+F+S+ T
Sbjct: 238 -SKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGT 284
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 70/329 (21%)
Query: 37 PRLKVALQNMGISSLF--PVQVAVWQ-------ETIGPGLFERDLCINSPTGSGKTLSYA 87
P V +++G++ + ++ W+ E+I L D+ + TGSGKT S+A
Sbjct: 23 PEETVTFKSLGVTDVLCEACEILGWKAPSKIQKESIPVALQGSDVIGLAETGSGKTGSFA 82
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
LP++QTL + R + LV+ PTR+LA Q+ + F A+ ++G+ + VG + +
Sbjct: 83 LPVLQTLLDNPQR-MYCLVLTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMMTQSMV 141
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
L K+P I++ATPGRL+DH+ T+GF L L YLV+DE D
Sbjct: 142 LAKKP---------------------HIIIATPGRLVDHLENTKGFNLRALKYLVMDEAD 180
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 267
R+L ++ + +L++ + + T+L
Sbjct: 181 RILNMDFEQEVNKILKVIPKERK-------TYL--------------------------- 206
Query: 268 VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL 327
SAT+T KL + L +P+ + T+Y+ ++L+ +K K +YLV +L
Sbjct: 207 ----YSATMTSKVAKLQRACLKNPVKVEVS-TKYQTVDKLQQSYCFIPAKFKDVYLVYIL 261
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
L IVF S+ +T R+ +L + G
Sbjct: 262 NELAGNSFIVFCSTCANTQRVALMLRNLG 290
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I + +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 50 IQREAIPLTIQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 108
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 109 SEQFEALGASIGVKCVVIVGGMDMMTQSLMLAKKPH---------------------III 147
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++
Sbjct: 148 ATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV------------- 194
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 195 --IPRE-------RRT----------------LLFSATMTKKVQKLQRASLQNPVKVEVS 229
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F S+ +T R LL G
Sbjct: 230 -TKYQTVEKLQQYYVFIPVKFKDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLRSLG 287
>gi|50295040|ref|XP_449931.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608117|sp|Q6FIL3.1|HAS1_CANGA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49529245|emb|CAG62911.1| unnamed protein product [Candida glabrata]
Length = 494
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 75/359 (20%)
Query: 25 EDCPLDH----LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
E +DH L P ++ A++ MG S + PVQ TI P + RD+ + TGS
Sbjct: 23 ESSDVDHSFKSLNLSQPTMR-AIEKMGFSKMTPVQA----RTIPPLMAGRDVLGAAKTGS 77
Query: 81 GKTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
GKTL++ LP ++ L + + +++ PTR+LALQ+ V + + G+ +G
Sbjct: 78 GKTLAFLLPTIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIG 137
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 197
++ E +L+K V++LVATPGRL+DH+ T+GF ++
Sbjct: 138 GANRRQEAEKLMK---------------------GVNLLVATPGRLLDHLQNTKGFIFKN 176
Query: 198 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
L LV+DE DR+L ++ + ++++ NE+R S
Sbjct: 177 LKALVIDEADRILEIGFEDEMRQIIKIL--PNEDRQS----------------------- 211
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICE 315
M+ SAT T L+++ L PLF+ E + LE ++CE
Sbjct: 212 ------------MLFSATQTTKVEDLSRISLRPGPLFINVVSEHDSSTADGLEQGYVVCE 259
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S + L L + L+ ++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 260 SDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 315
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 67/302 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ +GL V + VG +A + L +RP I
Sbjct: 127 QIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALARRPH---------------------I 165
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF L+ L +L++DE DR+L ++ L +L
Sbjct: 166 IVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKIL------------- 212
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFL 294
K PR + L SAT+T+ +KL + L P +
Sbjct: 213 --------------------------KVIPRERRTYLFSATMTKKVSKLERASLRDPARV 246
Query: 295 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ TRYK + L+ + + +K K YLV LL IVF ++ +T ++ +L
Sbjct: 247 SI-STRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQ 305
Query: 355 FG 356
G
Sbjct: 306 LG 307
>gi|396496328|ref|XP_003844718.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
gi|312221299|emb|CBY01239.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
Length = 613
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 80/368 (21%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERD 71
+P M +P S L R A++NMG ++ +Q Q+TI P L +D
Sbjct: 127 MPSMENPTKFSELN---------LSDRTMEAIKNMGFETMTEIQ----QKTIPPLLSGKD 173
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAV 128
+ + TGSGKTL++ +P ++ LS + +VV PTR+LALQ+ V +
Sbjct: 174 VLGAAKTGSGKTLAFLIPAIEMLSAMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKH 233
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
+ G+ +G ++ E +L+K V++L+ATPGRL+DH++
Sbjct: 234 SQTFGIVIGGANRRAEAEKLVK---------------------GVNLLIATPGRLLDHLH 272
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF ++L L++DE DR+L ++ + +V+++ SD +
Sbjct: 273 NTQGFVFKNLKSLIIDEADRILEVGFEDEMRSVIKILPSDRQT----------------- 315
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPER 306
M+ SAT T LA++ L PL++ + E
Sbjct: 316 ---------------------MLFSATQTTKVEDLARISLKPGPLYINVDYRKEHSTVEG 354
Query: 307 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 366
LE +IC+S + L + L+ ++K IVF SS S LLN+ + + + E
Sbjct: 355 LEQGYVICDSDTRFRLLFSFLKKHQKKKVIVFFSSCNSVKFYAELLNY---IDLPVLELH 411
Query: 367 GLQRQSVR 374
G +Q VR
Sbjct: 412 GKLKQQVR 419
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 65/301 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALEGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ +GL V + VG +A + L +RP I
Sbjct: 127 QIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALARRPH---------------------I 165
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF L+ L +L++DE DR+L ++ L +L++ +
Sbjct: 166 IVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKERR----- 220
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
T+L SAT+T+ +KL + L P ++
Sbjct: 221 --TYL-------------------------------FSATMTKKVSKLERASLRDPARVS 247
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
TRYK + L+ + + +K K YLV LL IVF ++ +T ++ +L
Sbjct: 248 IS-TRYKTVDNLKQHYIFIPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQL 306
Query: 356 G 356
G
Sbjct: 307 G 307
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 152/336 (45%), Gaps = 71/336 (21%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V F+D + + C A +G S +QV E I L +D+ + TGS
Sbjct: 38 VKTFKDLGVTDVLC------EACDQLGWKSPTKIQV----EAIPVALQGKDVIGLAETGS 87
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKT ++ALPI+Q+L R L LV+ PTR+LA Q+ + F A+ ++G+ + VG
Sbjct: 88 GKTGAFALPILQSLLASPQR-LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGID 146
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
+ + L K+P I++ATPGRL+DH+ T+GF+L L +
Sbjct: 147 MMSQSLVLAKKPH---------------------IVIATPGRLIDHMENTKGFSLRALKF 185
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 186 LVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL-------------------- 218
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 320
SAT+T+ KL + L P+ T+Y ++L+ Y + +K K
Sbjct: 219 -----------FSATMTKKVQKLQRAALKDPVKCAVS-TKYSTVDKLQQYYVFIPAKYKD 266
Query: 321 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
YLV++L L ++F S+ + R+ +L + G
Sbjct: 267 CYLVSILNELAGNSFMIFCSTCNNAQRVALMLRNLG 302
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I + RD+ + TGSGKT ++A+PI+Q L + A V+ PTR+LA Q+
Sbjct: 49 IQKESIPWAIEGRDIIGLAQTGSGKTAAFAIPIIQRLWQNP-QAFFACVLAPTRELAYQI 107
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F ++ +G+ + VG + + L KRP I+V
Sbjct: 108 AETFESLGSVIGVRCAVIVGGMDMMTQSIALAKRPH---------------------IIV 146
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL DH+ T+GF L+HL YLV+DE DRLL + + +L++ + +
Sbjct: 147 CTPGRLQDHLENTKGFNLKHLKYLVMDEADRLLDLDFGPKIDQILKVIPRER-------N 199
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T KL + LH P+ +
Sbjct: 200 TFL-------------------------------FSATMTTKVAKLQRASLHKPVKVEVA 228
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y + L Y L K K Y+V LL L I+FT + T ++ +L + G
Sbjct: 229 -TKYSTVKTLLQYYLFFPLKHKDCYMVYLLNELAGNSTIIFTRTCSDTQKIAIMLRNLG 286
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 137/306 (44%), Gaps = 63/306 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPT 110
F A+ +E I L ++D+ + TGSGKT ++A+P++Q L C +V+ PT
Sbjct: 62 FKAPSAIQKEAIPAALKQQDIIGLAQTGSGKTAAFAIPVIQALWENP--CPFFGVVLAPT 119
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
R+LA Q+ + F A+ A+G+ + VG + + + K+P
Sbjct: 120 RELAYQISEQFEALGGAMGVKSVVIVGGMDMVTQAVAISKKPH----------------- 162
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
ILV TPGRLMDH+ T+GF+L +L YLV+DE DRLL + + +L++ E
Sbjct: 163 ----ILVCTPGRLMDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPIIDKILKVI--PKE 216
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
R TFL SAT+T KL + LH+
Sbjct: 217 RR-----TFL-------------------------------FSATMTSKVEKLQRASLHN 240
Query: 291 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 350
P+ + + L+ Y L K K YLV ++ + + I+FT +V T R+
Sbjct: 241 PVRIAVSSKFSTVDTLLQKY-LFFPFKHKDTYLVYIVNEMAGQSMIIFTRTVNDTQRVAI 299
Query: 351 LLNHFG 356
LL G
Sbjct: 300 LLRSLG 305
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 137/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENP-QS 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L++ PTR+LA Q+ F ++ + + + VG + + L K+P
Sbjct: 121 FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 173 -------------IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 220 LKV---------------LPRE-------RRT----------------FLFSATMSSKVE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +
Sbjct: 242 SLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 302 VHETQRISFLLRSLG 316
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A++ + + P+Q I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 73 PELMEAIEKLKYTKPTPIQSGA----IPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE 128
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A R ALV+ PTR+LA Q+K+ F A+ +G+ VG + D+ +L+++P
Sbjct: 129 -AQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPH--- 184
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
ILVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 185 ------------------ILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGP 226
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 227 ALDKILKVIPTKR-------TTYL-------------------------------FSATM 248
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH P+ + +Y+ + L ++ K +L+ LL + I
Sbjct: 249 TNKIAKLQRASLHEPVKVAVS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSII 307
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + T R L G
Sbjct: 308 VFTRTCAHTQRSTLLARILG 327
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A++ + + P+Q I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 73 PELMEAIEKLKYTKPTPIQSGA----IPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE 128
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A R ALV+ PTR+LA Q+K+ F A+ +G+ VG + D+ +L+++P
Sbjct: 129 -AQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPH--- 184
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
ILVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 185 ------------------ILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGP 226
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 227 ALDKILKVIPTKR-------TTYL-------------------------------FSATM 248
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH P+ + +Y+ + L ++ K +L+ LL + I
Sbjct: 249 TNKIAKLQRASLHEPVKVAVS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSII 307
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + T R L G
Sbjct: 308 VFTRTCAHTQRSTLLARILG 327
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 140/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA+Q+ + F A+ + + + VG + + L K+P
Sbjct: 119 F-GLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPH-------- 169
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 170 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SATL+
Sbjct: 217 LKV---------------LPRE-------RRT----------------YLFSATLSSKVE 238
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L + K K +YLV +L + I+FT +
Sbjct: 239 SLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRT 298
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 299 VNETQRLSILLRALG 313
>gi|367016289|ref|XP_003682643.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
gi|359750306|emb|CCE93432.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
Length = 485
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A++ MG SS+ PVQ TI P L RD+ + TGSGKTL++ +P ++ L + +
Sbjct: 35 AVEKMGFSSMTPVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSLKFKP 90
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 91 RNGTGVIVITPTRELALQIFGVARELMEFHSQTYGIVIGGANRRQEADKLAK-------- 142
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 143 -------------GVNMLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEM 189
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ +D+ M+ SAT T
Sbjct: 190 RQIIKILPNDDRQ-------------------------------------SMLFSATQTT 212
Query: 279 DPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PLF+ E + LE ++C+S + L L + L+ ++K I
Sbjct: 213 KVEDLARISLRPGPLFINVVSEKDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKVI 272
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + E G Q+Q R
Sbjct: 273 VFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 307
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 149/325 (45%), Gaps = 66/325 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ +G + +QV E++ L RD+ + TGSGKT ++ALPI+
Sbjct: 22 LGLIDPLLE-ALEQVGYKTPTDIQV----ESLPHALEGRDIIGVASTGSGKTAAFALPIL 76
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + L A V+ PTR+LA Q+ F ++ A+G + VG + + L KR
Sbjct: 77 QKLWEDP-KGLFACVLAPTRELAYQISQQFESLGSAMGARCAVIVGGMDMPAQAIALAKR 135
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P I+VATPGRLM H+ T+GF+L + +LV+DE DRLL
Sbjct: 136 PH---------------------IVVATPGRLMQHLEETKGFSLRSIKFLVLDEADRLLD 174
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ A + +L++ + +T+L
Sbjct: 175 LDFGASIDKILKVIPKER-------TTYL------------------------------- 196
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
SAT+T KL + L +P+ + ++Y+ L Y L+ K K YL+ L+ SL
Sbjct: 197 FSATMTTKVAKLQRASLSNPVRIEV-SSKYQTVSTLLQYYLLMPLKDKDAYLIYLINSLA 255
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
+ I+FT +V RL +L G
Sbjct: 256 QNSIIMFTRTVHDAQRLSIILRTLG 280
>gi|321252297|ref|XP_003192357.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis ; Dbp3p [Cryptococcus gattii WM276]
gi|317458825|gb|ADV20570.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis, putative ; Dbp3p [Cryptococcus
gattii WM276]
Length = 639
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 71/356 (19%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
+E P L L P A++ MG ++ VQ TI P L +D+ + TGSGKT
Sbjct: 158 YERVPFSTL-NLSPPTTAAIERMGFETMTEVQA----RTIPPLLAGKDVLGAARTGSGKT 212
Query: 84 LSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
+++ +P V+ LS + V +++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 213 MAFLVPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFGVLMGGAN 272
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L+K V+++VATPGRL+DH+ T+GF ++L
Sbjct: 273 RKAEADKLVK---------------------GVNLIVATPGRLLDHLQNTKGFVFKNLKA 311
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + +++L S+N
Sbjct: 312 LVIDEADRILEIGFEEEMKQIIKLLPSENRQ----------------------------- 342
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKL 318
M+ SAT T LA++ L PL++ ET+ + LE ++CES
Sbjct: 343 --------SMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQ 394
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 395 RFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 447
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 140/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKNPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA+Q+ + F A+ + + + VG + + L K+P
Sbjct: 119 F-GLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPH-------- 169
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 170 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SATL+
Sbjct: 217 LKV---------------LPRE-------RRT----------------YLFSATLSSKVE 238
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L + K K +YLV +L + I+FT +
Sbjct: 239 SLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRT 298
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 299 VNETQRLSILLRALG 313
>gi|156844737|ref|XP_001645430.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
gi|160380651|sp|A7TJM9.1|DRS1_VANPO RecName: Full=ATP-dependent RNA helicase DRS1
gi|156116092|gb|EDO17572.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 752
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 155/355 (43%), Gaps = 74/355 (20%)
Query: 27 CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
+ L P LK L ++G + P+Q A TI GL +D+ + TGSGKT ++
Sbjct: 231 STFNSLTLSRPVLK-GLSDLGYTKPSPIQSA----TIPIGLSGKDIIAGAVTGSGKTAAF 285
Query: 87 ALPIVQTLSNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIAD 143
+PI++ L + V R +V+ PTR+LA+Q+ DV I V GL+ GLAVG ++
Sbjct: 286 MIPIIERLLYKPAKVASTRVIVLTPTRELAIQIADVGKKIGKYVSGLTFGLAVGGLNLRQ 345
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+ EL RP DI++ATPGR +DH+ + F ++ + LV+
Sbjct: 346 QEQELKTRP---------------------DIVIATPGRFIDHVRNSSSFNVDSVEVLVM 384
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE DR+L E +Q L +L T LPS +L
Sbjct: 385 DEADRMLEEGFQEELNEIL---------------TLLPSKRQTL---------------- 413
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKP-- 320
+ SAT+ L L L P+ + + + + ++ LKP
Sbjct: 414 -------LFSATMNSRIKSLISLSLRKPVRIMINPPKQAAARLTQEFVRIRKRDHLKPAL 466
Query: 321 -LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
YL+ L G+++ +VF + E H+L +L G L +K+ E G Q R
Sbjct: 467 LFYLIRKLDGTGQKRIVVFVARKEMAHKLRIIL---GLLGMKVGELHGSLTQEQR 518
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 132/305 (43%), Gaps = 60/305 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F + + + + VG + + L K+P
Sbjct: 131 ELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPH------------------ 172
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 173 ---IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKV------- 222
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR + SAT++ L + L +P
Sbjct: 223 --------LPRE-------RRT----------------YLFSATMSSKVESLQRASLQNP 251
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L + ++++ L+ + K K LYLV LL + CI+F +V T RL
Sbjct: 252 LRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFF 311
Query: 352 LNHFG 356
L G
Sbjct: 312 LRLLG 316
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 132/305 (43%), Gaps = 60/305 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F + + + + VG + + L K+P
Sbjct: 131 ELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPH------------------ 172
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 173 ---IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKV------- 222
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR + SAT++ L + L +P
Sbjct: 223 --------LPRE-------RRT----------------YLFSATMSSKVESLQRASLQNP 251
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L + ++++ L+ + K K LYLV LL + CI+F +V T RL
Sbjct: 252 LRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFF 311
Query: 352 LNHFG 356
L G
Sbjct: 312 LRLLG 316
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L +D+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 25 IQTEALPVALQGKDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRELAYQI 83
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+S + VG + + +L K+P +++
Sbjct: 84 AEQFEALGSTIGVSCVVIVGGIDMMTQALQLAKKP---------------------HVMI 122
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L YLV+DE DR+L ++A + +L++
Sbjct: 123 ATPGRLVDHLENTKGFNLRGLKYLVMDEADRILNMDFEAEIDKILKV------------- 169
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR + SAT+T+ KL + L P+ +
Sbjct: 170 --IPKQ-------RRT----------------YLYSATMTKKVAKLQRASLQDPVKVEV- 203
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ +L+ + +K K YLV++L +VF S+ +T R+ LL + G
Sbjct: 204 STKYQTVSKLQQSYIFIPAKYKDCYLVSILNEFAGNSFMVFCSTCNNTQRVALLLRNLG 262
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP-QP 117
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA+Q+ + F A+ + + + VG + + L K+P
Sbjct: 118 YFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPH-------- 169
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 170 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SATL+
Sbjct: 217 LKV---------------LPRE-------RRT----------------YLFSATLSSKVE 238
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L + K K +YLV +L + I+FT +
Sbjct: 239 SLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRT 298
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 299 VNETQRLSILLRALG 313
>gi|401626153|gb|EJS44112.1| has1p [Saccharomyces arboricola H-6]
Length = 505
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 71/351 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L +P LK A++ MG S++ VQ TI P L RD+ + TGSGKTL++ +
Sbjct: 44 FEELKLSEPTLK-AIEKMGFSTMTSVQ----SRTIPPLLAGRDVLGAAKTGSGKTLAFLI 98
Query: 89 PIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ L + + +V+ PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 99 PAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEA 158
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L+K V++L+ATPGRL+DH+ T+GF ++L L++DE
Sbjct: 159 EKLMK---------------------GVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDE 197
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ NE+R S
Sbjct: 198 ADRILEIGFEDEMRQIIKIL--PNEDRQS------------------------------- 224
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PLF+ ET + LE ++C+S + L L
Sbjct: 225 ----MLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDDRFLLL 280
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L+ ++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 281 FSFLKRNQKKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 328
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP-QP 117
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA+Q+ + F A+ + + + VG + + L K+P
Sbjct: 118 YFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPH-------- 169
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 170 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SATL+
Sbjct: 217 LKV---------------LPRE-------RRT----------------YLFSATLSSKVE 238
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L + K K +YLV +L + I+FT +
Sbjct: 239 SLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRT 298
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 299 VNETQRLSILLRALG 313
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P + ++Q M + P+Q E+I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 80 LIPEILESIQAMKFTKPTPIQA----ESIPHALAGKDIIGLAQTGSGKTAAFAIPILQAL 135
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ A +LV+ PTR+LA Q+K+ F A+ ++GL VG + D+ +L+++P
Sbjct: 136 WH-AKTPYFSLVLAPTRELAFQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPH- 193
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
++VATPGR+ DH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 194 --------------------VIVATPGRITDHLEHTKGFSLKNLKYLVMDEADRLLDMDF 233
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L +L++ +P VER + SA
Sbjct: 234 GPALDKILKV---------------IP-------------VER----------TSYLFSA 255
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L +P+ + +Y+ + L ++ K +LV LL +
Sbjct: 256 TMTNKIAKLQRASLKNPVRVAVS-NKYQTADNLVQSMMLVSDGYKNTFLVHLLNEFMGKS 314
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
IVFT +V ++ R L G
Sbjct: 315 IIVFTRTVANSERTAILTRLLG 336
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R L AL++ PTR+LA Q+
Sbjct: 40 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILQALLDNPQR-LFALILTPTRELAFQI 98
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ A+ +G+ + VG + + L K+P I++
Sbjct: 99 SEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPH---------------------III 137
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YLV+DE DR+L ++ + +L++ +
Sbjct: 138 ATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKEVDKLLKVIPKERR------- 190
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 191 TFL-------------------------------FSATMTKKVQKLQRASLQAPVKVEVA 219
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ L SK K YLV +L L +VF + + R+ +L + G
Sbjct: 220 -TKYQTVEKLQQSYLFIPSKFKDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLG 277
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 132/285 (46%), Gaps = 63/285 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 63 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQI 121
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 122 SEQFEALGASIGVKCAVIVGGMDMVAQALILSKKPH---------------------III 160
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ L YLV+DE DR+L ++ + +L++
Sbjct: 161 ATPGRLVDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKILRVI------------ 208
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR + L SAT+T+ KL + L P+ +
Sbjct: 209 ---------------------------PRERRTYLFSATMTKKVQKLQRASLQDPVKVEV 241
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
T+Y+ E+L+ Y + K K +YLV +L L IVF S+
Sbjct: 242 S-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFIVFVST 285
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 142/327 (43%), Gaps = 71/327 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQT 93
+D L ++N+G+ PVQ+ P + + CI TGSGKT ++ALPIVQT
Sbjct: 16 IDEWLIKQIKNLGVDKPTPVQINCI-----PAILDGRDCIGCDRTGSGKTFAFALPIVQT 70
Query: 94 LSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
LS + ALV+ PTR+LA Q+ D F I + L + + VG + D+ EL P
Sbjct: 71 LSKDPY-GIYALVLTPTRELAYQIADQFQIIGKPINLRMSVIVGGMGMMDQGIELSNHPH 129
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
I++ATPGRL DH+ + + F+ + + YLV+DE DRLL
Sbjct: 130 ---------------------IVIATPGRLADHLESCKTFSFKTIKYLVMDEADRLLEGN 168
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+ L + Q LP +L + S
Sbjct: 169 FDEQLQIIFQA---------------LPEKRQTL-----------------------LFS 190
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 333
AT+T NKL ++ L+ P F+ + E L+ ++ + K YLV ++Q+ EE
Sbjct: 191 ATITDTLNKLREVALNKP-FMWSAPVETATVEELDQRYILVPADFKDGYLVHVVQNFREE 249
Query: 334 K----CIVFTSSVESTHRLCTLLNHFG 356
K IVFT + S L L G
Sbjct: 250 KPKGSIIVFTDTCRSCQILSMTLLELG 276
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 63 ACTSLGYKAPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP-QP 117
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA+Q+ + F A+ + + + VG + + L K+P
Sbjct: 118 YFGLVLAPTRELAVQISESFEALGSLISVRCAVIVGGMDMISQSISLGKKPH-------- 169
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 170 -------------IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SATL+
Sbjct: 217 LKV---------------LPRE-------RRT----------------YLFSATLSSKVE 238
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL ++ +Y+ L + K K +YLV +L + I+FT +
Sbjct: 239 SLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRT 298
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 299 VNETQRLSILLRALG 313
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 135/302 (44%), Gaps = 53/302 (17%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++A+PI+Q L R ALV+ PTR+LA Q+
Sbjct: 45 IQREAIPAALAGKDIVGLAQTGSGKTAAFAIPILQFLLEDP-RPYFALVLSPTRELAFQI 103
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ V VG + + L KRP ++V
Sbjct: 104 SEQFLALGSEIGVRVATLVGGMDMVGQAVTLAKRPH---------------------VVV 142
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL-QLTRSDNENRFSDA 236
TPGR++DH+ AT+GFTL+H+ LV+DE DRLL ++ L +L + RSD + S
Sbjct: 143 GTPGRVVDHLTATKGFTLKHVRILVLDEADRLLNMDFEEELDQILAAVPRSDADP--SKG 200
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
TF + + SAT+T KL + L +
Sbjct: 201 ETFARKTY--------------------------LFSATMTSQVAKLQRASLRSKETVRI 234
Query: 297 G-ETRYKLPERLESYKLICESKLKPLYLVALLQSL-GEEKCIVFTSSVESTHRLCTLLNH 354
+Y E L + L K K YL L + L CIVFT + S RL +L +
Sbjct: 235 EVSAKYSTVETLVQHYLFIPEKYKDCYLTYLFEELVARHSCIVFTDTQSSAQRLALMLRN 294
Query: 355 FG 356
G
Sbjct: 295 LG 296
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 152/341 (44%), Gaps = 70/341 (20%)
Query: 18 PVDVSLFEDCPLDHLPCLD--PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
P++V+ E+ L P L ++Q+M + P+Q E I L D+
Sbjct: 51 PIEVNPDEELKFKSFSELKLVPELLESIQSMKFTKPTPIQ----SEAIPHALEGHDIIGL 106
Query: 76 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLA 135
+ TGSGKT ++A+PI+Q L A ALV+ PTR+LA Q+K+ F A+ +GL
Sbjct: 107 AQTGSGKTAAFAIPILQALWE-AQSPYFALVLAPTRELAFQIKETFDALGSTMGLRSVCI 165
Query: 136 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 195
VG + D+ +L+++P ++VATPGR+MDH+ T+GF L
Sbjct: 166 VGGMDMMDQARDLMRKPH---------------------VIVATPGRIMDHLETTKGFKL 204
Query: 196 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 255
+ L YLV+DE DRLL + L +L++ + +T+L
Sbjct: 205 KDLKYLVMDEADRLLDMDFGPALDRILKVIPTKR-------TTYL--------------- 242
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 315
SAT+T KL + LH+P+ + ++Y+ + L ++
Sbjct: 243 ----------------FSATMTNKIEKLQRASLHNPVRVAVS-SKYQTADNLVQSMMLVH 285
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHR---LCTLLN 353
K L+ LL + IVFT +V R LC +L
Sbjct: 286 DGYKNTILIHLLSEYEGKLIIVFTRTVAHAQRTALLCRILG 326
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q E I P L +D+ + TGSGKT ++A+PI+ L +
Sbjct: 114 PELIEACENLKYSKPTPIQA----EAIPPALEGKDIIGLAQTGSGKTAAFAIPILNQLWH 169
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+K+ F ++ A+G+ VG ++ D+ +L+++P
Sbjct: 170 DQ-QPYYACVLAPTRELAQQIKETFDSLGGAMGVRTTCIVGGMNMIDQARDLMRKPH--- 225
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF++ L +LV+DE DRLL +
Sbjct: 226 ------------------IIIATPGRLMDHLENTKGFSMRKLKFLVMDEADRLLDMEFGP 267
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 268 VLDRILKII-------------------------------------PTQGRTTYLFSATM 290
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ T+Y+ + L ++ LK +L+ LL + I
Sbjct: 291 TSKIDKLQRASLTNPVKCAVS-TKYQTVDTLIQTLMVVPGGLKNTFLIYLLNEFLGKTAI 349
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + R+ TL N
Sbjct: 350 VFTRTKANAERIATLCN 366
>gi|307179995|gb|EFN68085.1| Probable ATP-dependent RNA helicase DDX31 [Camponotus floridanus]
Length = 871
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 162/351 (46%), Gaps = 75/351 (21%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINS 76
PVD +F L + QNM I+ + VQ Q+ I P +F +D+ I S
Sbjct: 278 PVDEPIFTKITFADLNIHPFMISNLEQNMHITKMTTVQ----QKAI-PEIFSGKDVLIRS 332
Query: 77 PTGSGKTLSYALPIVQTLS------NRAVRCLRALVVLPTRDLALQVKDVFAA-IAPAVG 129
TGSGKTL+YALPIV+ L NR L AL+V+PTR+LALQ + F + P
Sbjct: 333 QTGSGKTLAYALPIVELLHKIRPKLNRN-SGLSALIVVPTRELALQTYECFIKLVKPFTW 391
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+ G +G KR +A L+ +IL+ TPGRL+DHI
Sbjct: 392 IVPGYIIGGE----------KRKAEKA-----------RLRKGCNILITTPGRLLDHIKH 430
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+ L + Y ++DE DR+L Y+ + + Q S EN
Sbjct: 431 TKALRLNEVRYFILDEADRMLEMGYEKNISDMNQEFDSKAEN------------------ 472
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--------TTGETRY 301
+E+ KD R ++LSATLTQ KLA L +++P+F+ T+G
Sbjct: 473 --AQNIEQDCKDVTQSRRKTILLSATLTQAVEKLAGLAMYNPIFVDAAKENLETSGGDTS 530
Query: 302 KLPERL-------ESYKLICESKLKPL----YLVALLQSLGEEKCIVFTSS 341
++ E L +SY ++ KL+ + Y+V+ Q+ G+ K ++F ++
Sbjct: 531 EINEDLIVPQSVIQSY-IVTPPKLRMVTLSAYIVSRCQTPGQHKILIFMAT 580
>gi|158514833|sp|A3LSN3.3|DRS1_PICST RecName: Full=ATP-dependent RNA helicase DRS1
Length = 741
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 152/351 (43%), Gaps = 85/351 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G + P+Q A +I L RD+ + TGSGKT +Y +PI++ L
Sbjct: 232 PVLK-GLSQLGYTKPSPIQSA----SIPIALLGRDIVAGAVTGSGKTAAYMIPIIERLLY 286
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+QV DV I V L+ GLAVG ++ + +L RP
Sbjct: 287 KPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKSRP- 345
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
D+++ATPGRL+DHI + F+++ L LV+DE DR+L E
Sbjct: 346 --------------------DVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEG 385
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L +L L P + ++ S
Sbjct: 386 FQVELTEILSLI-------------------------------------PKNKRQTLLFS 408
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L QL L P+ + P + + KL E LKP L L
Sbjct: 409 ATMNTKIQDLIQLSLQRPVRIMID------PPKTAATKLTQEFVRIRKRDHLKPALLFQL 462
Query: 327 LQSLG---EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ L + + +VF S ES H+L +L G L +K+ E G Q R
Sbjct: 463 LKKLDPAQQSRIVVFVSRKESAHKLRIVL---GLLGMKVSELHGSLTQEQR 510
>gi|150864695|ref|XP_001383630.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits [Scheffersomyces stipitis CBS 6054]
gi|149385951|gb|ABN65601.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits, partial [Scheffersomyces stipitis CBS 6054]
Length = 672
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 152/351 (43%), Gaps = 85/351 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G + P+Q A +I L RD+ + TGSGKT +Y +PI++ L
Sbjct: 169 PVLK-GLSQLGYTKPSPIQSA----SIPIALLGRDIVAGAVTGSGKTAAYMIPIIERLLY 223
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+QV DV I V L+ GLAVG ++ + +L RP
Sbjct: 224 KPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKSRP- 282
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
D+++ATPGRL+DHI + F+++ L LV+DE DR+L E
Sbjct: 283 --------------------DVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEG 322
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L +L L P + ++ S
Sbjct: 323 FQVELTEILSLI-------------------------------------PKNKRQTLLFS 345
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L QL L P+ + P + + KL E LKP L L
Sbjct: 346 ATMNTKIQDLIQLSLQRPVRIMID------PPKTAATKLTQEFVRIRKRDHLKPALLFQL 399
Query: 327 LQSLG---EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ L + + +VF S ES H+L +L G L +K+ E G Q R
Sbjct: 400 LKKLDPAQQSRIVVFVSRKESAHKLRIVL---GLLGMKVSELHGSLTQEQR 447
>gi|6323947|ref|NP_014017.1| ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae S288c]
gi|2500537|sp|Q03532.1|HAS1_YEAST RecName: Full=ATP-dependent RNA helicase HAS1; AltName:
Full=Helicase associated with SET1 protein 1
gi|530347|emb|CAA56799.1| RNA helicase [Saccharomyces cerevisiae]
gi|151945998|gb|EDN64230.1| helicase associated with set1 [Saccharomyces cerevisiae YJM789]
gi|190408516|gb|EDV11781.1| RNA-dependent helicase [Saccharomyces cerevisiae RM11-1a]
gi|207342060|gb|EDZ69940.1| YMR290Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270688|gb|EEU05851.1| Has1p [Saccharomyces cerevisiae JAY291]
gi|259148878|emb|CAY82123.1| Has1p [Saccharomyces cerevisiae EC1118]
gi|285814296|tpg|DAA10191.1| TPA: ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae
S288c]
gi|323346981|gb|EGA81258.1| Has1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353213|gb|EGA85513.1| Has1p [Saccharomyces cerevisiae VL3]
gi|349580582|dbj|GAA25742.1| K7_Has1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297463|gb|EIW08563.1| Has1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 505
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 169/378 (44%), Gaps = 76/378 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
E++ K P V FE+ L P LK A++ MG +++ VQ
Sbjct: 22 EKSTSKQNNAAPEGEQTTCVEKFEELKLSQ-----PTLK-AIEKMGFTTMTSVQA----R 71
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVK 118
TI P L RD+ + TGSGKTL++ +P ++ L + + +V+ PTR+LALQ+
Sbjct: 72 TIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIF 131
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V + + G+ +G ++ E +L+K V++L+A
Sbjct: 132 GVARELMEFHSQTFGIVIGGANRRQEAEKLMK---------------------GVNMLIA 170
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ T+GF ++L L++DE DR+L ++ + ++++ NE+R S
Sbjct: 171 TPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKIL--PNEDRQS---- 224
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-T 296
M+ SAT T LA++ L PLF+
Sbjct: 225 -------------------------------MLFSATQTTKVEDLARISLRPGPLFINVV 253
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
ET + LE ++C+S + L L + L+ ++K IVF SS S LLN+
Sbjct: 254 PETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNY-- 311
Query: 357 ELRIKIKEYSGLQRQSVR 374
+ + + E G Q+Q R
Sbjct: 312 -IDLPVLELHGKQKQQKR 328
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A N+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + +
Sbjct: 66 ACANLGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QA 120
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 121 FFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAIALGKKPH-------- 172
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
+++ATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +
Sbjct: 173 -------------VIIATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 219
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ F+P RR + SAT++
Sbjct: 220 LK---------------FVPRE-------RRT----------------FLFSATMSSKIE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P+ ++ +Y+ L Y L K ++L+ LL +K ++FT +
Sbjct: 242 SLQRASLRDPVRVSISSNKYQTVSTLLQYYLFIPHTQKDVHLIYLLNEHAGKKIMIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 302 VAETQRLAILLRSLG 316
>gi|348689923|gb|EGZ29737.1| hypothetical protein PHYSODRAFT_309945 [Phytophthora sojae]
Length = 482
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q+ I GL +D+ + TGSGKT ++ +PI+Q+L R L ALV+ PTR+LA Q+
Sbjct: 57 IQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQSLLRNPQR-LYALVLAPTRELAYQI 115
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++GL VG + + L ++P +++
Sbjct: 116 GEQFEALGASIGLKCACVVGGIDMMQQQVALARKPH---------------------VVI 154
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L + +LV+DE DR+L ++ + ++QL ++ +
Sbjct: 155 ATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAER-------N 207
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL + L P+ +
Sbjct: 208 TYL-------------------------------FSATMTSKVRKLQRASLKDPVKVEIT 236
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++ PE L+ + L +K K YL +L + + ++F S+ T ++ +L + G
Sbjct: 237 H-KFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLG 294
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 61/288 (21%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+ + F A+ ++
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIGEQFEALGASI 119
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
G+ + + VG + L KRP ++VATPGRL+DH+
Sbjct: 120 GILIAVIVGGVDTVTQSLALAKRP---------------------HVIVATPGRLVDHLE 158
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF L L YLV+DE DR+L ++ L +L++ +P
Sbjct: 159 NTKGFNLRALKYLVMDEADRILNMDFEVELEKILKV---------------IPKE----- 198
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
RR + SAT+T+ KL + L+ P+ + ++Y+ ++L+
Sbjct: 199 --RRT----------------YLYSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLK 239
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + K K YL+ +L + + IVF S+ S + +L G
Sbjct: 240 QYYIFIPYKYKEAYLIYILNEMAGQTAIVFCSTCASALKTALMLRKLG 287
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 61/288 (21%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+ + F A+ ++
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIGEQFEALGASI 119
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
G+ + + VG + L KRP ++VATPGRL+DH+
Sbjct: 120 GILIAVIVGGVDTVTQSLALAKRPH---------------------VIVATPGRLVDHLE 158
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF L L YLV+DE DR+L ++ + +L++ +P
Sbjct: 159 NTKGFNLRALKYLVMDEADRILNMDFEVEVEKILKV---------------IPKE----- 198
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
RR + SAT+T+ KL + L+ P+ + ++Y+ ++L+
Sbjct: 199 --RRT----------------YLYSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLK 239
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + K K YLV +L + + IVF S+ S R +L G
Sbjct: 240 QYYIFIPYKYKEAYLVYILNEMAGQTAIVFCSTCVSALRTALMLRKLG 287
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E+I L RDL + TGSGKT ++ALPI+Q L + LV+ PTR+LA+Q+
Sbjct: 75 IQAESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GLVLAPTRELAVQI 133
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ + + + VG + + L K+P I+V
Sbjct: 134 SEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIV 172
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 173 ATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV------------- 219
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SATL+ L + L +PL ++
Sbjct: 220 --LPRE-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSIS 254
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L + K K +YLV +L + I+FT +V T RL LL G
Sbjct: 255 SNKYQTVSTLLQSYIFIPHKYKDVYLVHILNEFPGQSTIIFTRTVNETQRLAILLRALG 313
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A+Q+M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L +
Sbjct: 74 PELLEAIQSMKFTKPTPIQA----EAIPHALEGKDVIGLAVTGSGKTAAFAIPILQSLWH 129
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ LV+ PTR+LA Q+KD F A+ +GL VG + D+ +L+++P
Sbjct: 130 DQL-PYYCLVLSPTRELAYQIKDTFDALGSGMGLRACCIVGGMDMMDQARDLMRKPH--- 185
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGR++DH+ T+GF+L++L YLV+DE DRLL +
Sbjct: 186 ------------------VIVATPGRIVDHLEHTKGFSLKNLKYLVMDEADRLLDLDFGP 227
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 228 ELDKILRVIPRER-------NTYL-------------------------------FSATM 249
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L++P+ + ++Y+ + L ++ K YLV LL + I
Sbjct: 250 TNKIEKLQRASLNNPVRIAVS-SKYQTADNLVQSMMLVSDGYKNTYLVHLLNEFVGKSII 308
Query: 337 VFTSSVESTHRLCTLLNHFG 356
+FT + + R L G
Sbjct: 309 IFTRTCAHSQRTALLARILG 328
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 28 IQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 86
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P I++
Sbjct: 87 SEQFEALGSSIGVKCAVIVGGMDMHAQGLLLEKKP---------------------HIII 125
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L + +L++DE DR+L ++ + +L++
Sbjct: 126 ATPGRLVDHLENTKGFNLRQIKFLIMDEADRILNMDFEVEVNKILRV------------- 172
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 173 --MPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS 207
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ E+L+ Y + K K +YLV +L L ++F + +T R LL + G
Sbjct: 208 -TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNNFMIFCGTCNNTVRTALLLRNLG 265
>gi|254565179|ref|XP_002489700.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|238029496|emb|CAY67419.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|328350119|emb|CCA36519.1| ATP-dependent RNA helicase DDX18 [Komagataella pastoris CBS 7435]
Length = 546
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 71/348 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +P LK A+ NMG + + VQ TI P L RD+ + TGSGKTL++ +P +
Sbjct: 89 LKLSEPTLK-AIGNMGFTKMTAVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 143
Query: 92 QTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
+ L + + A+V+ PTR+LALQ+ V + + + G+ +G ++ E +L
Sbjct: 144 EMLYSLKFKPRNGTGAIVITPTRELALQIFGVARELMESHSQTFGILIGGANRRAEAEKL 203
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
+K V+I++ATPGRL+DH+ T+GF ++L L++DE DR
Sbjct: 204 MK---------------------GVNIIIATPGRLLDHLQNTKGFIFKNLKALIIDEADR 242
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L ++ + ++++ NENR +
Sbjct: 243 ILEIGFEDEMKQIIKIL--PNENRQT---------------------------------- 266
Query: 269 KMVLSATLTQDPNKLAQLDLHH-PLFLTT-GETRYKLPERLESYKLICESKLKPLYLVAL 326
M+ SAT T LA++ L PL++ E + LE ++C+S + L L +
Sbjct: 267 -MLFSATQTTKVEDLARVSLRKGPLYINVDSENETSTVDGLEQGYVVCDSDKRFLLLFSF 325
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 326 LKRNQKKKIIVFLSSCNSVKYYSELLNY---IDLPVLDLHGKQKQQKR 370
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 140/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q ++ I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 84 ACERLGYKRPTPIQ----EQAIPLALQNRDLIGIAETGSGKTAAFALPILQALLDKP-QP 138
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 139 LFALVLAPTRELAAQIAQAFEALGSMISLRCALILGGLDMVQQAIALGKKPH-------- 190
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 191 -------------VIVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKI 237
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 238 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 259
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ ++Y+ L + + K YL+ L+ + I+FT +
Sbjct: 260 SLQRASLRDPLKVSISTSKYQTVSTLVQHYIFIPHIHKDTYLIYLVNEFAGKTIIIFTRT 319
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 320 VLETQRIAILLRTLG 334
>gi|323332194|gb|EGA73605.1| Has1p [Saccharomyces cerevisiae AWRI796]
Length = 505
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 169/378 (44%), Gaps = 76/378 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
E++ K P V FE+ L P LK A++ MG +++ VQ
Sbjct: 22 EKSTSKQNNAAPEGEQTTCVEKFEELKLSQ-----PTLK-AIEKMGFTTMTSVQA----R 71
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVK 118
TI P L RD+ + TGSGKTL++ +P ++ L + + +V+ PTR+LALQ+
Sbjct: 72 TIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIF 131
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V + + G+ +G ++ E +L+K V++L+A
Sbjct: 132 GVARELMEFHSQTFGIVIGGANRRQEAEKLMK---------------------GVNMLIA 170
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ T+GF ++L L++DE DR+L ++ + ++++ NE+R S
Sbjct: 171 TPGRLLDHLQNTQGFVFKNLKALIIDEADRILEIGFEDEMRQIIKIL--PNEDRQS---- 224
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-T 296
M+ SAT T LA++ L PLF+
Sbjct: 225 -------------------------------MLFSATQTTKVEDLARISLRPGPLFINVV 253
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
ET + LE ++C+S + L L + L+ ++K IVF SS S LLN+
Sbjct: 254 PETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNY-- 311
Query: 357 ELRIKIKEYSGLQRQSVR 374
+ + + E G Q+Q R
Sbjct: 312 -IDLPVLELHGKQKQQKR 328
>gi|223590197|sp|A5DKW3.2|DRS1_PICGU RecName: Full=ATP-dependent RNA helicase DRS1
gi|190347530|gb|EDK39816.2| hypothetical protein PGUG_03914 [Meyerozyma guilliermondii ATCC
6260]
Length = 705
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 152/342 (44%), Gaps = 81/342 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+ +L + V A+ +I + +D+ + TGSGKT +Y +PI++ L + AV R
Sbjct: 212 GVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYKPAAVSATR 271
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
+V+ PTR+LA+QV DV + V L+ GLAVG ++ + +L RP
Sbjct: 272 VIVLTPTRELAIQVCDVGKKLGQFVANLNFGLAVGGLNLRQQEQQLKSRP---------- 321
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
DI+VATPGRL+DHI + F++E+L LV+DE DR+L E +Q L +L
Sbjct: 322 -----------DIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVELTEIL 370
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 282
+L P + M+ SAT+
Sbjct: 371 ELI-------------------------------------PKHKRQTMLFSATMNTKIQD 393
Query: 283 LAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSLG---E 332
L QL L P+ + P + + KL+ E LKP L LL+ + +
Sbjct: 394 LIQLSLDKPVRIMVN------PPKQAASKLVQEFVRIRKREHLKPALLYHLLRLVDPQQQ 447
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ +VF S E HRL +L G L +K+ E G Q R
Sbjct: 448 NRIVVFVSRKEMAHRLRIVL---GLLGMKVSELHGSLTQEQR 486
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 67/302 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ +GL + VG +A + L +RP I
Sbjct: 127 QIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPH---------------------I 165
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF L+ L +L++DE DR+L ++ L +L
Sbjct: 166 IVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKIL------------- 212
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFL 294
K PR + L SAT+T+ +KL + L P +
Sbjct: 213 --------------------------KVIPRERRTYLFSATMTKKVSKLERASLRDPARV 246
Query: 295 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ +RYK + L+ + + +K K YLV LL IVF ++ +T ++ +L
Sbjct: 247 SV-SSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQ 305
Query: 355 FG 356
G
Sbjct: 306 LG 307
>gi|255711296|ref|XP_002551931.1| KLTH0B03278p [Lachancea thermotolerans]
gi|238933309|emb|CAR21493.1| KLTH0B03278p [Lachancea thermotolerans CBS 6340]
Length = 739
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 150/335 (44%), Gaps = 85/335 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPT 110
P+Q A TI L +D+ + TGSGKT +Y +PI++ L + + R +V+ PT
Sbjct: 248 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAYMIPIIERLLYKPAQIASTRVIVLTPT 303
Query: 111 RDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+LA+QV DV A +A V G+S GLAVG ++ + L RP
Sbjct: 304 RELAIQVSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRP----------------- 346
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
DI++ATPGRL+DHI + F ++ + LV+DE DR+L E +Q L ++ L
Sbjct: 347 ----DIVIATPGRLIDHIRNSASFNVDSVEILVIDEADRMLEEGFQDELNEIMSL----- 397
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+PS +L + SAT+ N+L L L
Sbjct: 398 ----------IPSKRQTL-----------------------LFSATMNSKINQLISLSLK 424
Query: 290 HPLFLTTGETRYKLPERLESYKLICE-------SKLKP---LYLVALLQSLGEEKCIVFT 339
P+ + P R + KL E +LKP +L+ L L +++ +VF
Sbjct: 425 KPVKIMID------PPRQAAAKLTQEFVRVRKRDELKPALLFHLIRKLDDLSQKRVVVFV 478
Query: 340 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ E H+L +L G L +K+ E G Q R
Sbjct: 479 ARKEVAHKLRIIL---GLLGMKVAELHGSLSQEQR 510
>gi|320581153|gb|EFW95374.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 747
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 146/339 (43%), Gaps = 72/339 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
AL +G S +Q A +I L +D+ + TGSGKT +Y +PI++ L + +
Sbjct: 254 ALSALGYSKPSAIQSA----SIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPSKM 309
Query: 101 -CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGI 158
R +V+ PTR+LA+QV DV I V GL+ GLAVG ++ + EL KRP
Sbjct: 310 PSTRVIVLAPTRELAIQVADVGKKIGQFVNGLTFGLAVGGLNLRQQEQELKKRP------ 363
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
DI++ATPGRL+DHI + F +E + LV DE DR+L E +Q L
Sbjct: 364 ---------------DIVIATPGRLIDHIRNSVSFNVESVEVLVFDEADRMLEEGFQKEL 408
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+L L P R M+ SAT+
Sbjct: 409 TEILSLL-------------------------------------PLNRQT-MLFSATMNS 430
Query: 279 DPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLG--EEKC 335
L QL L P+ + G + E ++ + ++ KP L +L + +
Sbjct: 431 RIKSLIQLSLKKPVRVMIGAPKAAASELVQEFVRIRKRESSKPALLFNILSEMDGLHSRV 490
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
IVF S E HRL L G L +K+ E G Q R
Sbjct: 491 IVFVSRKEMAHRLRISL---GLLGLKVSELHGSLTQEQR 526
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 114 bits (285), Expect = 8e-23, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 65/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +Q+ E I L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 9 ACDQLGWKSPTKIQI----EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 63
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ + F A+ ++G+ + VG + + L K+P
Sbjct: 64 LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH-------- 115
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I++ATPGRL+DH+ T+GF+L + +LV+DE DR+L ++ + +
Sbjct: 116 -------------IVIATPGRLIDHLENTKGFSLRAVKFLVMDEADRILNMDFETEVDKI 162
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + TFL SAT+T+
Sbjct: 163 LKVIPRERR-------TFL-------------------------------FSATMTKKVQ 184
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L P+ T+Y ++L+ Y + SK K YLV++L L I+F S+
Sbjct: 185 KLQRAALKDPVKCAV-STKYTTVDKLQQYYIFIPSKYKDCYLVSILNDLAGNSFIIFCST 243
Query: 342 VESTHRLCTLLNHFG 356
+ R+ LL + G
Sbjct: 244 CNNAQRVALLLRNLG 258
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 64/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P+L A + +G + A+ E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 54 PQLCEACETLG----YKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPILQALMD 109
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ + LV+ PTR+LA Q+ + F A+ + + + VG + + + KRP
Sbjct: 110 KP-QPFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGKRPH--- 165
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL +
Sbjct: 166 ------------------IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGP 207
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +L++ LP RR + SAT+
Sbjct: 208 IIDKILKV---------------LPRE-------RRT----------------FLFSATM 229
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
+ L + L +PL ++ +Y+ L Y + K K ++L+ LL + I
Sbjct: 230 SSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQYYMFIPHKHKDVHLIWLLNEHIGQTTI 289
Query: 337 VFTSSVESTHRLCTLLNHFG 356
+FT ++ T+RL L G
Sbjct: 290 IFTRTIHETNRLALLTRFLG 309
>gi|366986679|ref|XP_003673106.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
gi|342298969|emb|CCC66713.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 73/338 (21%)
Query: 27 CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
+ L P LK L +G + P+Q A TI L +D+ + TGSGKT ++
Sbjct: 226 ANFNSLSLSRPVLK-GLATLGYTKPSPIQSA----TIPVALSGKDIIAGAVTGSGKTAAF 280
Query: 87 ALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIAD 143
+P+++ L + + R +V+ PTR+LA+Q+ DV I + G++ GLAVG ++
Sbjct: 281 MIPVIERLLFKSAKIAATRVIVLTPTRELAIQISDVGKKIGKFINGITFGLAVGGLNLRQ 340
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+ EL RP DI++ATPGR +DHI + F ++ + LV+
Sbjct: 341 QEQELKARP---------------------DIVIATPGRFIDHIRNSASFNVDSVEILVI 379
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE DR+L E +Q L ++QL LP+ +L
Sbjct: 380 DEADRMLEEGFQEELNEIMQL---------------LPNKRQTL---------------- 408
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLICESKLKPL 321
+ SAT+ +L L L P+ + + + RL E ++ LKP
Sbjct: 409 -------LFSATMNSKIKQLVSLSLRKPVRIMIDPPK-QAASRLTQEFVRIRARDHLKPA 460
Query: 322 YLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
L L++ L G+++ +VF S E HRL +L G
Sbjct: 461 LLFNLIKKLDGYGQKRMVVFVSRKEMAHRLRIILGLLG 498
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 65/301 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 80 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 136
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ +GL + VG +A + L +RP I
Sbjct: 137 QIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRP---------------------HI 175
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF L+ L +L++DE DR+L ++ L +L++ +
Sbjct: 176 IVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKERR----- 230
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
T+L SAT+T+ +KL + L P ++
Sbjct: 231 --TYL-------------------------------FSATMTKKVSKLERASLRDPARVS 257
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
TRYK + L+ + + +K K YLV LL IVF ++ + ++ +L
Sbjct: 258 V-STRYKTVDNLKQHYIFIPNKYKETYLVYLLNEHAGNSAIVFCATCATAMQIAVMLRQL 316
Query: 356 G 356
G
Sbjct: 317 G 317
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 159 LFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPH-------- 210
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L + YLV+DE DRLL + L +
Sbjct: 211 -------------VIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKI 257
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 258 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 279
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ +Y L+S + K YLV L + I+FT +
Sbjct: 280 SLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRT 339
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 340 VLETQRIAILLRTLG 354
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 159 LFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPH-------- 210
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L + YLV+DE DRLL + L +
Sbjct: 211 -------------VIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKI 257
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 258 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 279
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ +Y L+S + K YLV L + I+FT +
Sbjct: 280 SLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRT 339
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 340 VLETQRIAILLRTLG 354
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 139/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G ++ P+Q ++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 67 ACDRLGYTNPTPIQA----QSIPHALQNRDVIGLAETGSGKTAAFALPIIQALLDKPSH- 121
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ F A+ V L V + VG + + L K+P
Sbjct: 122 LFGLVLAPTRELAAQIAASFEALGSLVNLRVAVIVGGLDMVAQAIALGKKPH-------- 173
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +
Sbjct: 174 -------------IVVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 220
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ F+P RR + SAT++
Sbjct: 221 LK---------------FIPRE-------RRT----------------FLFSATMSSKIE 242
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P+ ++ + ++ L + C K YLV L+ +K ++FT +
Sbjct: 243 SLQRASLRDPVRISISSSSHQTVSTLIQNYIFCPHNKKDTYLVYLVNEYSGKKIVLFTRT 302
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 303 VTETQRLAILLRTLG 317
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 65/311 (20%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
+G + P+Q E+I L +RDL + TGSGKT ++ALPI+Q+L ++ + L
Sbjct: 89 LGYKAPTPIQA----ESIPLALQDRDLIALAETGSGKTAAFALPILQSLLDKP-QPFFGL 143
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
V+ PTR+LA Q+ F A+ +G+ + VG + + L K+P
Sbjct: 144 VLAPTRELAYQISQSFEALGSKIGVRCAVIVGGMDMVPQAIALGKKPH------------ 191
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
I+VA+PGRL+DH+ T+GF+L L YLV+DE DRLL + A + +L++
Sbjct: 192 ---------IIVASPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFGAIIDKILKVI 242
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
E R T+L SAT++ L +
Sbjct: 243 --PRERR-----TYL-------------------------------FSATMSSKVESLQR 264
Query: 286 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 345
L PL ++ T+Y+ L LI K +YLV L+ + I+FT +V T
Sbjct: 265 ASLKDPLRVSV-STKYQTVSTLIQNCLIVPLVHKDVYLVYLMNEFAGQSAIIFTRTVNET 323
Query: 346 HRLCTLLNHFG 356
RL LL G
Sbjct: 324 QRLAILLRSLG 334
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 22 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 80
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + +L ++P I++
Sbjct: 81 SEQFEALGASIGVKCCVIVGGMDMVSQALQLARKP---------------------HIII 119
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ + YLV+DE DR+L ++ L +L++ +
Sbjct: 120 ATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELDKILKVLPRERR------- 172
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 173 TFL-------------------------------FSATMTKKVKKLERASLKDPVKVEVS 201
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y + +K K +YLV +L L ++F S+ +T R +L G
Sbjct: 202 -SKYQTVEKLLQYYVFIPAKFKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALG 259
>gi|367006540|ref|XP_003688001.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
gi|357526307|emb|CCE65567.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
+P +K A++ MG ++ PVQ TI P L RD+ + TGSGKTL++ LP ++ L
Sbjct: 43 EPTMK-AIEKMGFENMTPVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLH 97
Query: 96 NRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + +V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 98 SLKYKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLVK-- 155
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++L+ATPGRL+DH+ T+GF ++L L++DE DR+L
Sbjct: 156 -------------------GVNMLIATPGRLLDHLQNTKGFVYKNLKALIIDEADRILEI 196
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ E+R S M+
Sbjct: 197 GFEDEMKQIIRIL--PKEDRQS-----------------------------------MLF 219
Query: 273 SATLTQDPNKLAQLDLHH-PLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PLF+ + + LE ++CES + L L + L+
Sbjct: 220 SATQTTKVEDLARMSLRKGPLFINVVTDKDTSTADGLEQGYVVCESDKRFLLLFSFLKRN 279
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 280 QKKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 320
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 139/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q QE I L RD+ + TGSGKT ++ALPI+Q L ++ +
Sbjct: 79 ACERLGYKNPTPIQ----QEAIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKP-QP 133
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 134 LFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGLDMVQQAIALGKKPH-------- 185
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L +L +LV+DE DRLL + L +
Sbjct: 186 -------------VVVATPGRLLDHLEKTKGFSLRNLKFLVMDEADRLLDMDFGPILEKI 232
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 233 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 254
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ ++Y+ L + K YL+ L + I+FT +
Sbjct: 255 SLQRASLRDPLKVSISSSKYQTVSTLVQNYIFIPHMHKDTYLIYLCNEFAGQTIIIFTRT 314
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 315 VLETQRIAILLRTLG 329
>gi|254572509|ref|XP_002493364.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|238033162|emb|CAY71185.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|328352620|emb|CCA39018.1| hypothetical protein PP7435_Chr3-0044 [Komagataella pastoris CBS
7435]
Length = 721
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 162/392 (41%), Gaps = 77/392 (19%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-------ETIG 64
+ W+ P+ + P L LK LQ G F VQ++V Q +T
Sbjct: 206 IDWLAKPIYYTTRATLPFQKLNLPPSLLKNILQKFGYKEAFSVQISVIQALQHDIKQTRI 265
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAI 124
DL N+PTGSGKTL Y +PIVQ + R V ++ +++ PT+ L QV +
Sbjct: 266 SNSIPGDLLANAPTGSGKTLGYCVPIVQAILGRRVSSIKCIILAPTKPLVSQVYSTLNQL 325
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 184
L+V + + ++ +E L EL + DI+V+TPGRL+
Sbjct: 326 CTGTDLNV-MELRNDTVDNEKMRLTS----------------YELPNYPDIIVSTPGRLL 368
Query: 185 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 244
+H+NA R L L +LVVDE DR+L W +L+ +D + + L +
Sbjct: 369 EHLNANR-LKLHCLRFLVVDEADRILHSTSFDWCAPLLRKINNDRSTSYGKSGKSLSALN 427
Query: 245 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---- 300
S+ + K+V SATLT D KL+ L L+ P L +
Sbjct: 428 LSVVPCQ-----------------KLVFSATLTTDAEKLSHLQLYRPRLLVVNDHGVESG 470
Query: 301 -------YKLPERLESYKLICESK-----LKPLYLVALLQS------LGE--------EK 334
Y+LP L+ L + KPL L LL +G+
Sbjct: 471 KDGSSELYQLPPSLDELSLTLSNTDGVEFFKPLILFKLLTEYVYRARMGDMNVSVPFKAN 530
Query: 335 CIVFTSSVESTHRLCTLLNHFGE-----LRIK 361
+VF S E++ R+ LL+ E LR+K
Sbjct: 531 VLVFIRSNEASARMEKLLDLLAEAFRKKLRVK 562
>gi|254581554|ref|XP_002496762.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
gi|238939654|emb|CAR27829.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
Length = 494
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 157/343 (45%), Gaps = 71/343 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ MG +++ VQ TI P L RD+ + TGSGKTL++ +P ++ L +
Sbjct: 40 PTLK-AIDKMGFTTMTSVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHS 94
Query: 97 RAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
+ +V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 95 LKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLVK--- 151
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
V++L+ATPGRL+DH+ T+GF ++L L++DE DR+L
Sbjct: 152 ------------------GVNLLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIG 193
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
++ + ++++ NE+R S M+ S
Sbjct: 194 FEEEMRQIIKIL--PNEDRQS-----------------------------------MLFS 216
Query: 274 ATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
AT T LA++ L PLF+ E E LE ++C+S + L L + L+
Sbjct: 217 ATQTTKVEDLARISLRAGPLFINVVSEKDNSTVEGLEQGYVVCDSDKRFLLLFSFLKRNQ 276
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 277 KKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 316
>gi|146417127|ref|XP_001484533.1| hypothetical protein PGUG_03914 [Meyerozyma guilliermondii ATCC
6260]
Length = 705
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 152/342 (44%), Gaps = 81/342 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+ +L + V A+ +I + +D+ + TGSGKT +Y +PI++ L + AV R
Sbjct: 212 GVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYKPAAVSATR 271
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
+V+ PTR+LA+QV DV + V L+ GLAVG ++ + +L RP
Sbjct: 272 VIVLTPTRELAIQVCDVGKKLGQFVANLNFGLAVGGLNLRQQEQQLKSRP---------- 321
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
DI+VATPGRL+DHI + F++E+L LV+DE DR+L E +Q L +L
Sbjct: 322 -----------DIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVELTEIL 370
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 282
+L P + M+ SAT+
Sbjct: 371 ELI-------------------------------------PKHKRQTMLFSATMNTKIQD 393
Query: 283 LAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSLG---E 332
L QL L P+ + P + + KL+ E LKP L LL+ + +
Sbjct: 394 LIQLSLDKPVRIMVN------PPKQAASKLVQEFVRIRKREHLKPALLYHLLRLVDPQQQ 447
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ +VF S E HRL +L G L +K+ E G Q R
Sbjct: 448 NRIVVFVSRKEMAHRLRIVL---GLLGMKVLELHGSLTQEQR 486
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 148/327 (45%), Gaps = 71/327 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK AL ++G ++ P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 247 PVLK-ALGDLGYATPSPIQGA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLIY 301
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+QV DV + V GL+ G+AVG ++ + L RP
Sbjct: 302 KPAKVASTRVIVLAPTRELAIQVADVGKKLGKYVNGLTFGIAVGGLNLRQQEQILKTRP- 360
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 361 --------------------DIVIATPGRFIDHIRNSSSFNVDSVEVLVIDEADRMLEEG 400
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q + ++ L LPS + M+ S
Sbjct: 401 FQDEINEIMHL---------------LPS-----------------------KRQTMLFS 422
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE-RLESYKLICESKLKP---LYLVALLQS 329
AT+ +L L L P+ + T + + + + E ++ LKP YL+ L
Sbjct: 423 ATMNSKIKQLVSLSLKRPVRVMTDPPQQAVSKLQQEFVRIRKRDHLKPSTLFYLIKKLDG 482
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFG 356
+++ +VF S E HRL +L G
Sbjct: 483 AAQKRMVVFVSKKEMVHRLRIILGLLG 509
>gi|365984639|ref|XP_003669152.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
gi|343767920|emb|CCD23909.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 149/329 (45%), Gaps = 75/329 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L N+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 259 PVLK-GLANLGYNKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLF 313
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+Q+ DV I V GL+ GLAVG ++ + L +RP
Sbjct: 314 KPAKVSSTRVIVLTPTRELAIQIADVAKKIGKFVNGLTFGLAVGGLNLRQQEQILKQRP- 372
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DH+ + F ++ + LV+DE DR+L E
Sbjct: 373 --------------------DIVIATPGRFIDHVRNSASFNVDSVEILVMDEADRMLEEG 412
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++QL L T R+ M+ S
Sbjct: 413 FQEELNEIMQL----------------------LPTKRQT----------------MLFS 434
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
AT+ +L L L P+ + + KL + E ++ LKP L L++ L
Sbjct: 435 ATMNSKIKQLINLSLKKPVRIMINPPKQAASKLTQ--EFVRIRTRDHLKPALLFNLIKKL 492
Query: 331 GE---EKCIVFTSSVESTHRLCTLLNHFG 356
E ++ +VF + E+ H+L +L G
Sbjct: 493 DEYSQKRMVVFVARKETAHKLRIILGLLG 521
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 135/304 (44%), Gaps = 62/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RD+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 69 PTQIQA--ESIPLALQGRDVIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 125
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + A+ + + + VG + + L K+P
Sbjct: 126 LAYQISEQVEALGSLISVRCAVIVGGMDMVSQAIALGKKPH------------------- 166
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 167 --IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV-------- 216
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
LP RR + SAT++ L + L +PL
Sbjct: 217 -------LPKE-------RRT----------------YLFSATMSSKVESLQRASLSNPL 246
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++ +Y+ L L K K +Y V LL + IVFT +V T RL LL
Sbjct: 247 RVSISSNKYQTVATLLQNYLFIPHKYKDIYFVYLLNEFPGQSVIVFTRTVNETQRLAILL 306
Query: 353 NHFG 356
G
Sbjct: 307 RALG 310
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 149/343 (43%), Gaps = 67/343 (19%)
Query: 15 MRSPVDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC 73
M P + S P L +DP L+ AL M F + + + L RD+
Sbjct: 1 MAGPEEASTSAAAPTFKSLGLIDPLLE-ALDKMS----FKAPTEIQAQALPHALEGRDII 55
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
+ TGSGKT ++ALPI+Q L + + L A V+ PTR+LA Q+ F A+ A+G+
Sbjct: 56 GVASTGSGKTAAFALPILQKLWDDP-KGLFACVLAPTRELAYQISQQFEALGSAMGVRCA 114
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
+ VG + I + L KRP I+VATPGRL DH+ T+GF
Sbjct: 115 VIVGGTDIMAQKVALAKRPH---------------------IVVATPGRLDDHLEKTKGF 153
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
L + +LV+DE DRLL + + +L++ + +T+L
Sbjct: 154 NLRGIKFLVLDEADRLLDMDFGPVIDKILKVIPKER-------TTYL------------- 193
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 313
SAT+T KL + L +P+ + T+Y+ + L Y L+
Sbjct: 194 ------------------FSATMTTKVAKLQRASLSNPVRVEV-NTKYQTVDSLLQYYLL 234
Query: 314 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K K LV L +L + I+FT +V RL +L G
Sbjct: 235 MPLKEKDTLLVYLANTLAQNSIIIFTRTVNDAARLSIILRTLG 277
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 73/320 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A + MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 87 ACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPN 142
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
C V+ PTR+LA+Q+ + F A+ +G+ + VG + + ++ K P
Sbjct: 143 HFFAC----VMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---- 194
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+V TPGR++DH+ T+GF+L L YLV+DE DRLL E ++
Sbjct: 195 -----------------HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEE 237
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L + + TFL SAT+
Sbjct: 238 SLNEILGMIPRERR-------TFL-------------------------------FSATM 259
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T+ KL ++ L +P+ + T ++Y + L+ +K K YLV +L + +
Sbjct: 260 TKKVEKLQRVCLRNPVKIETS-SKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSM 318
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + +ST L +L + G
Sbjct: 319 VFTRTCDSTRLLALILRNLG 338
>gi|365984861|ref|XP_003669263.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
gi|343768031|emb|CCD24020.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
Length = 519
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A++ MG SL PVQ TI P + RD+ + TGSGKTL++ +P ++ L + +
Sbjct: 65 AIEKMGFESLTPVQA----RTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKFKP 120
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 121 RNGTGIIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLMK-------- 172
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V+IL+ATPGRL+DH+ T+GF ++L L++DE DR+L ++ +
Sbjct: 173 -------------GVNILIATPGRLLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEM 219
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ NE+R S M+ SAT T
Sbjct: 220 KQIIRIL--PNEDRQS-----------------------------------MLFSATQTT 242
Query: 279 DPNKLAQLDLHH-PLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PLF+ E + LE ++C+S + L L + L+ + K +
Sbjct: 243 KVEDLARISLRKGPLFINVESEKDTSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKRKSL 302
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F SS S LLN+ + + + E G Q+Q R
Sbjct: 303 SFYSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 337
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR+LA Q+
Sbjct: 74 IQREAIPLALNGKDIIGLAETGSGKTAAFALPILQALLDNPQRYF-AVVLTPTRELAYQI 132
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L ++P I++
Sbjct: 133 SEQFEALGTMIGVKCCVVVGGMDLVAQALQLARKPH---------------------III 171
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ L YLV+DE DR+L ++ + +L++ +
Sbjct: 172 ATPGRLVDHLENTKGFGLKALKYLVMDEADRILNMDFEVEVNKILRVIPRERR------- 224
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 225 TFL-------------------------------FSATMTKKVKKLERASLRDPVKVEVS 253
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ ++L Y + +K K +YLV +L L ++F S+ +T R +L G
Sbjct: 254 -SKYQTVDKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALG 311
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 154/345 (44%), Gaps = 74/345 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G + P+Q A TI GL +D+ + TGSGKT ++ +PI++ L
Sbjct: 230 PVLK-GLSDLGYTKPSPIQSA----TIPIGLLGKDIIAGAVTGSGKTAAFMIPIIERLLY 284
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+ PTR+LA+QV DV I V GL+ GLAVG ++ + EL RP
Sbjct: 285 KPANIASTRVIVLTPTRELAIQVSDVGKRIGKYVNGLTFGLAVGGLNLRQQEQELKTRP- 343
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
D+++ATPGR +DHI + F ++ + LV+DE DR+L +
Sbjct: 344 --------------------DVVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDG 383
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L LP+ +L + S
Sbjct: 384 FQEELNEIMSL---------------LPTKRQTL-----------------------LFS 405
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK-LKP---LYLVALLQS 329
AT+ +L L L P+ + + + + I + LKP YL+ L S
Sbjct: 406 ATMNSKIKQLISLSLRRPVRIMINPPKQAAARLTQEFVRIRKRDLLKPALLYYLIRKLDS 465
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+++ +VF S E HRL ++ G L +K+ E G Q R
Sbjct: 466 SSQKRIVVFVSRKEMAHRLRIIM---GLLGMKVAELHGSLTQEQR 507
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 61/300 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 116
+ Q++I + +D+ + TGSGKT ++A+P++QTL L LV+ PTR+LA Q
Sbjct: 50 IQQKSIPIAIEGKDVIGLAETGSGKTAAFAIPVLQTLLKTPGGGRLSCLVMTPTRELAFQ 109
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+++ F A+ ++GLS VG + + L K+P ++
Sbjct: 110 IREQFQALGSSIGLSCACIVGGIEMMSQQLALAKKP---------------------HVI 148
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ TRGF L+ L +L++DE DR+L ++A + +L+
Sbjct: 149 VATPGRLVDHLEKTRGFNLKALKFLIMDEADRILNLDFEAEVDKILRAI----------- 197
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
P R M+ SAT+T KL + L +P+ ++
Sbjct: 198 --------------------------PRERQT-MLFSATMTAKVKKLQRAALKNPVKISI 230
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ + ++ Y I E+ K YLV+LL L ++FTS+ T + L+ G
Sbjct: 231 NSKYKTVDKNIQKYMFIPEAH-KECYLVSLLNELQGSSFMIFTSTCAKTSLIARLVKRLG 289
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 83 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 141
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L ++P I++
Sbjct: 142 SEQFEALGASIGIKCCVIVGGMDMVSQALHLARKPH---------------------III 180
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ + YLV+DE DR+L ++ L +L++ +
Sbjct: 181 ATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKILKVIPRERR------- 233
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 234 TFL-------------------------------FSATMTKKVKKLERASLKDPVKVEVS 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y + +K K +YLV +L L ++F S+ +T R +L G
Sbjct: 263 -SKYQTVEKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALG 320
>gi|444318663|ref|XP_004179989.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
gi|387513030|emb|CCH60470.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
Length = 496
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVL 108
F AV TI P L RD+ + TGSGKTL++ +P ++ L + + +V+
Sbjct: 52 FTEMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKPRNGTGVIVIT 111
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 112 PTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLVK------------------ 153
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
V+IL+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + ++++
Sbjct: 154 ---GVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKIL--P 208
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
NE+R S M+ SAT T LA++ L
Sbjct: 209 NEDRQS-----------------------------------MLFSATQTTKVEDLARISL 233
Query: 289 HH-PLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PLF+ E + LE ++CES + L L + L+ ++K IVF SS S
Sbjct: 234 RKGPLFINVVPENDTSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKIIVFLSSCNSVK 293
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + E G Q+Q R
Sbjct: 294 YYAELLNY---IDLPVLELHGKQKQQKR 318
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ +P++Q L R L ALV+ PTR+LA Q+
Sbjct: 46 IQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQALLENPQR-LFALVLTPTRELAFQI 104
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
++ F A+ A+G+ + VG + + L K+P ++V
Sbjct: 105 EEQFKALGSAIGIKTCVVVGGVDMMGQQIILAKKPH---------------------VVV 143
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GFTL + +LV+DE DR+L +++ L T+L++ E R
Sbjct: 144 ATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTILKVI--PRERR----- 196
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T KL + L P+
Sbjct: 197 TFL-------------------------------FSATMTGKVKKLQRAALTKPVKCAV- 224
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y ++L Y L SK K YL A++ L I+F + +T R +L + G
Sbjct: 225 NNKYHTVDKLFQYYLFLPSKDKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLG 283
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 132/301 (43%), Gaps = 60/301 (19%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
A+ QE I L +RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA
Sbjct: 86 TAIQQEAIPLALQDRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAA 144
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ + L L +G + + L K+P +
Sbjct: 145 QIAQSFEALGSLINLRCALLLGGLDMVQQAIALGKKPH---------------------V 183
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF+L +L Y V+DE DRLL + L +L+
Sbjct: 184 VVATPGRLLDHLEKTKGFSLRNLRYCVMDEADRLLDMDFGPILEKILK------------ 231
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
FLP RR + SAT++ L + L PL +
Sbjct: 232 ---FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVN 265
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y+ L S L K Y + L + IVFT +V T R+ LL
Sbjct: 266 VSTSKYQTVSTLVSNYLFIPHIHKDTYFIYLCNEFAGKTMIVFTRTVLETQRIAILLRTL 325
Query: 356 G 356
G
Sbjct: 326 G 326
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 59/304 (19%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ +I P L RD+ + TGSGKT S+A+PI+ L + + + A+++ PTR+
Sbjct: 62 PTQIQAA--SIPPALEGRDVIGLAETGSGKTGSFAIPILNYLLEKPQKQVFAVILAPTRE 119
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ +V A+ +G + VG +A + L + P
Sbjct: 120 LAFQIHEVMVALGRGMGANSVCVVGGVDMASQAIALARNPH------------------- 160
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
++VATPGRL+DH+ T+GF L + YLV+DE DR+L ++ + +L++
Sbjct: 161 --VVVATPGRLLDHLQNTKGFHLRQIKYLVMDEADRMLSMDFEKEINEILEV-------- 210
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
I C E+G + M+ SAT+T KL + L P+
Sbjct: 211 -----------------IPDC--EKGRR--------TMLFSATMTSKVEKLQRASLVDPV 243
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ T+++ P++L L +K K YL L+ + +VF ++ + RL +L
Sbjct: 244 RVEV-STKFQTPKKLLQNYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALML 302
Query: 353 NHFG 356
+ G
Sbjct: 303 RNLG 306
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 61/288 (21%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+ + F A+ ++
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIGEQFEALGASI 119
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
G+ + + VG + L KRP ++VATPGRL+DH+
Sbjct: 120 GILIAVIVGGIDTVTQSLALAKRP---------------------HVIVATPGRLVDHLE 158
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF L L YLV+DE DR+L ++ L +L++ + T+L
Sbjct: 159 NTKGFNLRALKYLVMDEADRILNMDFEVELEKILKVIPKERR-------TYL-------- 203
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
SAT+T+ KL + L P+ + ++Y+ ++L+
Sbjct: 204 -----------------------YSATMTKKVAKLERASLVDPVRIEVS-SKYQTVDKLK 239
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y + K K YL+ +L + + IVF S+ S + +L G
Sbjct: 240 QYYIFIPYKYKEAYLIYILNEMAGQTAIVFCSTCASALKTALMLRKLG 287
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 59/273 (21%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
+RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q+ + F A+ ++
Sbjct: 47 KRDIIGLAETGSGKTGAFALPILQALLATPQR-LFALVLTPTRELAYQISEQFEALGSSI 105
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
G+ + VG + + L K+P I++ATPGRL+DH+
Sbjct: 106 GVKCAVIVGGMDMMSQSIALAKKPH---------------------IVIATPGRLVDHLE 144
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF+L + YLV+DE DR+L ++ L +L++ LP
Sbjct: 145 NTKGFSLRSIQYLVMDEADRILNMDFEVDLDKILKI---------------LP------- 182
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
P + SAT+T+ KL + L P+ + + +Y ++L+
Sbjct: 183 --------------PSSTRSTYLYSATMTKKVAKLQRASLRDPIKIEVSD-KYATVDKLQ 227
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L SK K +YLV++L + + IVF S+
Sbjct: 228 QTYLFIPSKFKDVYLVSILNDMSGKSIIVFAST 260
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 73/320 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A + MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 16 ACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPN 71
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
C V+ PTR+LA+Q+ + F A+ +G+ + VG + + ++ K P
Sbjct: 72 HFFAC----VMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---- 123
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+V TPGR++DH+ T+GF+L L YLV+DE DRLL E ++
Sbjct: 124 -----------------HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEE 166
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L + + TFL SAT+
Sbjct: 167 SLNEILGMIPRERR-------TFL-------------------------------FSATM 188
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T+ KL ++ L +P+ + T ++Y + L+ +K K YLV +L + +
Sbjct: 189 TKKVEKLQRVCLRNPVKIET-SSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSM 247
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + +ST L +L + G
Sbjct: 248 VFTRTCDSTRLLALILRNLG 267
>gi|385305508|gb|EIF49474.1| atp-dependent rna helicase dbp6 (dead-box protein 6) [Dekkera
bruxellensis AWRI1499]
Length = 528
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 149/332 (44%), Gaps = 63/332 (18%)
Query: 33 PCLDPRLKVALQN-MGISSLFPVQVAVWQETIGPGLFER-------DLCINSPTGSGKTL 84
P LD +L L+ GI F VQV V Q + R D +N+ TGSGKTL
Sbjct: 74 PKLDEKLVSNLKTEFGIEEAFSVQVNVIQSIMKAVTKNRLDPRPYGDYLVNAATGSGKTL 133
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS-VGLAVGQSSIAD 143
+Y +P+V+ L NR V +R ++ PT+ L QV + L+ + L G+S +
Sbjct: 134 AYLIPVVEALKNRXVPRVRCXILAPTKPLVNQVYLTLLKLTKGFDLNIIALRSGESLRIE 193
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+ P DI+VATPGRL+DHI + L L +LVV
Sbjct: 194 HDRFVNNHP---------------------DIIVATPGRLVDHI-SKFDLDLSQLRFLVV 231
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE DRLL +++Q W ++ ++ E+ D+++F + K RC
Sbjct: 232 DEADRLLNQSFQNWCDVLVGKIEAEQEDD-QDSNSF----YNKFKI--RC---------- 274
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKLICESK 317
VK++LSATLT + KL+ L L P + + Y+LP LE Y +
Sbjct: 275 ----VKVILSATLTTNSEKLSHLKLFKPNLVVINNSEELVHELYQLPPHLEEYYINIPEA 330
Query: 318 L---KPLYLVALLQSLGE--EKCIVFTSSVES 344
L KPL + L + + ++FT S E+
Sbjct: 331 LSFYKPLIFLRFLLDQPDLIDHGLIFTKSNET 362
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR+LA Q+
Sbjct: 82 IQREAIPLALQGKDIIGLAETGSGKTGAFALPILQALLDNPQRYF-AVVLTPTRELAYQI 140
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L ++P I++
Sbjct: 141 SEQFEALGATIGVKCCVIVGGMDLVTQAIQLARKPH---------------------III 179
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L+ + YLV+DE DR+L ++ + +L++ +
Sbjct: 180 ATPGRLVDHLENTKGFSLKAIRYLVMDEADRILNMDFEEEVNKILKVMPRERR------- 232
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 233 TFL-------------------------------FSATMTKKVKKLERASLRDPVKVEVS 261
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ E+L Y L ++ K +YLV +L L ++F S+ +T R +L G
Sbjct: 262 -SKYQTVEKLLQYYLFIPARYKNVYLVHVLNELAGNSFMIFCSTCNNTVRTALMLRALG 319
>gi|157115632|ref|XP_001658272.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108876828|gb|EAT41053.1| AAEL007274-PA [Aedes aegypti]
Length = 442
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 61/296 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 83 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 141
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L ++P I++
Sbjct: 142 SEQFEALGASIGIKCCVIVGGMDMVSQALHLARKPH---------------------III 180
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L+ + YLV+DE DR+L ++ L +L++ +
Sbjct: 181 ATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKILKVIPRERR------- 233
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 234 TFL-------------------------------FSATMTKKVKKLERASLKDPVKVEVS 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
++Y+ E+L Y + +K K +YLV +L L ++F S+ +T R ++N
Sbjct: 263 -SKYQTVEKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALIVN 317
>gi|237830427|ref|XP_002364511.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211962175|gb|EEA97370.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221487590|gb|EEE25822.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221507384|gb|EEE32988.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 569
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 157/339 (46%), Gaps = 74/339 (21%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGS 80
S F D + L DP +K AL M + L +Q P L E RD+ + TGS
Sbjct: 80 SFFSDVTFESLDICDP-VKKALAEMKMERLTEIQAKSI-----PRLLEGRDVLGAAKTGS 133
Query: 81 GKTLSYALPIVQTLSNRAVRCL-----RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLA 135
GKTL++ +P V+ L V+ L +V+ PTR+L+LQ+ DV A +A + ++GL
Sbjct: 134 GKTLAFLVPAVELLYQ--VKFLPRNGTGVIVISPTRELSLQIFDVAAELAKFLPQTLGLV 191
Query: 136 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 195
+G ++ E+ ++LQ V+ILVATPGRL+DH+ T+GF
Sbjct: 192 IGGANRKHEV---------------------EKLQKGVNILVATPGRLLDHLQNTKGFQY 230
Query: 196 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 255
+L LV+DE DR+L+ ++ + +LQ+ LP +T + C
Sbjct: 231 SNLLSLVIDEADRILQIGFEEEMNAILQM---------------LP------QTRQTC-- 267
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 315
+ SAT + LA+L L P+F+ +T + + Y ++C
Sbjct: 268 ---------------LFSATQSAKVADLARLSLKKPVFVEVKDTVATVRGIQQGY-VVCP 311
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
++ + L L L+ E+K +VF SS S L N+
Sbjct: 312 AEERFLLLFTFLKKNREKKIMVFFSSCMSVRFHDELFNY 350
>gi|392576363|gb|EIW69494.1| hypothetical protein TREMEDRAFT_71647 [Tremella mesenterica DSM
1558]
Length = 562
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 74/363 (20%)
Query: 20 DVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
DV+L ++ P L L P A++ MG +++ VQ TI P L +D+ +
Sbjct: 73 DVALSEEYQTTPFSSL-SLTPATTSAIERMGFTTMTEVQA----RTIPPLLAGKDVLGAA 127
Query: 77 PTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
TGSGKT+++ +P V+ LS + V +++ PTR+LALQ+ V + + G
Sbjct: 128 RTGSGKTMAFLVPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFG 187
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
+ +G ++ E +LQ V+++VATPGRL+DH+ T+GF
Sbjct: 188 VLMGGANRKTEA---------------------DKLQKGVNLIVATPGRLLDHLQNTKGF 226
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
++L LV+DE DR+L ++ + ++++ NENR S
Sbjct: 227 IFKNLKALVIDEADRILEIGFEEEMKQIIKIL--PNENRQS------------------- 265
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETRY-KLPERLESYK 311
M+ SAT T LA++ L PL++ ++ + LE
Sbjct: 266 ----------------MLFSATQTTKVTDLARISLRPGPLYINVDSSKSASTVDMLEQGY 309
Query: 312 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 371
++CES + + L L+ ++K IVF SS S + LLN+ + + + + G Q+Q
Sbjct: 310 VVCESDKRFMLLFTFLRRNLKKKIIVFFSSCNSVNYHAELLNY---IDVPVLDLHGKQKQ 366
Query: 372 SVR 374
R
Sbjct: 367 QKR 369
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 97 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRFF-ALVLTPTRELAFQI 155
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + +L K+P I++
Sbjct: 156 GEQFEALGSSIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 194
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 195 ATPGRLVDHLENMKGFNLKSIKYLVMDEADRILNMDFEVELDKILKV------------- 241
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 242 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 276
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ Y L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 277 -NKYQTVEQLQQYYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 334
>gi|430811847|emb|CCJ30703.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 486
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 142/329 (43%), Gaps = 83/329 (25%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERDLCINSPTGSGKTLSYAL 88
DH L K L++ + LFPVQ Q + P + DL I +PTGSGKTL+Y +
Sbjct: 136 DHSIHLSNEFKYQLRSRNYTELFPVQKVTIQLILDNPSSCKEDLFIGAPTGSGKTLAYVI 195
Query: 89 PIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
PI+QT C + ++ F ++ + L+ A GQS
Sbjct: 196 PIIQT-------CWKYKTLV-----------YFLSLIKYINLN-SFAGGQS--------- 227
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
VDIL+ TPGRL+DHI T F+L+HL YLV+DE DR
Sbjct: 228 -----------------------LVDILICTPGRLVDHIQNTPNFSLQHLKYLVIDEADR 264
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDA--STFLPSAFGS-LKTIRRCG--VERGFKDKP 263
LL + +Q W+ V+ + S+ +T LP A LK I VE+ K
Sbjct: 265 LLSQRFQNWIEIVMNEIEKPKSYKDSNYKLATDLPDAVNDPLKLIFHDDFVVEK----KS 320
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL-------------------- 303
Y K++ SATLT +P K+ L L +P + E++ L
Sbjct: 321 YI-TQKLIFSATLTCNPEKVISLRLRNPRLILIEESKSSLSKYFSENKVSIRNDDICKFF 379
Query: 304 -PERLESYKLICESKLKPLYLVALLQSLG 331
P L Y ++ ES KPL++ + + + G
Sbjct: 380 VPSALNEYAVLIESDAKPLFICSDIMARG 408
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 68/320 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A+Q M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 80 PELLEAIQQMKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE 135
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A LV+ P R+LA Q+K+ F A+ +G+ VG + D+ +L+++P
Sbjct: 136 -AQTPYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPH--- 191
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGR+MDH+ T+GF+L+ L Y V+DE D+LL +
Sbjct: 192 ------------------IIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGP 233
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L+ S +T+L SAT+
Sbjct: 234 VLDKILKQIPSKR-------TTYL-------------------------------FSATM 255
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + LH+P+ + ++Y+ + L ++ K YL+ LL + I
Sbjct: 256 TNKIEKLQRASLHNPVRVAVS-SKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSII 314
Query: 337 VFTSSVESTHR---LCTLLN 353
+F + T R LC +L
Sbjct: 315 IFARTRAHTQRTSILCRILG 334
>gi|302309551|ref|NP_986999.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|442570164|sp|Q74Z73.2|HAS1_ASHGO RecName: Full=ATP-dependent RNA helicase HAS1
gi|299788412|gb|AAS54823.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|374110250|gb|AEY99155.1| FAGR333Cp [Ashbya gossypii FDAG1]
Length = 504
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A+ MG + + VQ TI P + RD+ + TGSGKTL++ LP ++ L + +
Sbjct: 53 AIGKMGFTKMTQVQA----RTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKP 108
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 109 RNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLAK-------- 160
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 161 -------------GVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEM 207
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ NE+R S M+ SAT T
Sbjct: 208 KQIIKIL--PNEDRQS-----------------------------------MLFSATQTT 230
Query: 279 DPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PLF+ E + LE ++C+S + L L L+ +K I
Sbjct: 231 KVEDLARISLRPGPLFINVDSEKETSTADGLEQGYVVCDSDKRFLLLFTFLKKFQNKKII 290
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + E G Q+Q R
Sbjct: 291 VFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 325
>gi|406606941|emb|CCH41663.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 578
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 71/343 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P +K A+++MG + VQ TI P L RD+ + TGSGKTL++ +P ++ L +
Sbjct: 123 PTMK-AIKSMGFEKMTQVQA----RTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYS 177
Query: 97 RAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 153
+ +VV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 178 LKFKPRNGTGVIVVSPTRELALQIFGVARELMEHHSQTFGIVIGGANRRAEEEKLVK--- 234
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
V++L+ATPGRL+DH+ TRGF ++L LV+DE DR+L
Sbjct: 235 ------------------GVNLLIATPGRLLDHLQNTRGFVFKNLKALVIDEADRILEIG 276
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
++ + ++++ D M+ S
Sbjct: 277 FEEEMRQIIKILPKDERQ-------------------------------------SMLFS 299
Query: 274 ATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
AT T LA++ L PLF+ + +RLE ++CES + L L + L+
Sbjct: 300 ATQTTKVEDLARISLRPGPLFINVDSKEENSTVDRLEQGYVVCESDKRFLLLFSFLKRNV 359
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 360 KKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 399
>gi|401839179|gb|EJT42502.1| HAS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 505
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 71/351 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L P LK A++ +G +++ VQ TI P L RD+ + TGSGKTL++ +
Sbjct: 44 FEELKLSQPTLK-AIEKLGFTTMTSVQ----SRTIPPLLAGRDVLGAAKTGSGKTLAFLI 98
Query: 89 PIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ L + + +V+ PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 99 PAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEA 158
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L+K V++L+ATPGRL+DH+ T+GF ++L L++DE
Sbjct: 159 EKLMK---------------------GVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDE 197
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ NE+R S
Sbjct: 198 ADRILEIGFEDEMRQIIKIL--PNEDRQS------------------------------- 224
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PLF+ ET + LE ++C+S + L L
Sbjct: 225 ----MLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDDRFLLL 280
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L+ ++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 281 FSFLKRNQKKKIIVFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 328
>gi|323335994|gb|EGA77270.1| Has1p [Saccharomyces cerevisiae Vin13]
gi|365763984|gb|EHN05510.1| Has1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 505
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 76/378 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
E++ K P V FE+ L P LK A++ MG +++ VQ
Sbjct: 22 EKSTSKQNNAAPEGEQTTCVEKFEELKLSQ-----PTLK-AIEKMGFTTMTSVQA----R 71
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVK 118
TI P L D+ + TGSGKTL++ +P ++ L + + +V+ PTR+LALQ+
Sbjct: 72 TIPPLLAGXDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIF 131
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V + + G+ +G ++ E +L+K V++L+A
Sbjct: 132 GVARELMEFHSQTFGIVIGGANRRQEAEKLMK---------------------GVNMLIA 170
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ T+GF ++L L++DE DR+L ++ + ++++ NE+R S
Sbjct: 171 TPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKIL--PNEDRQS---- 224
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-T 296
M+ SAT T LA++ L PLF+
Sbjct: 225 -------------------------------MLFSATQTTKVEDLARISLRPGPLFINVV 253
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
ET + LE ++C+S + L L + L+ ++K IVF SS S LLN+
Sbjct: 254 PETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNY-- 311
Query: 357 ELRIKIKEYSGLQRQSVR 374
+ + + E G Q+Q R
Sbjct: 312 -IDLPVLELHGKQKQQKR 328
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 60/305 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ + LV+ PTR
Sbjct: 72 YKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFALPILQALMDKP-QPFFGLVLAPTR 130
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ + F A+ + + + VG + + + KRP
Sbjct: 131 ELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGKRPH------------------ 172
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L++
Sbjct: 173 ---IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKV------- 222
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR + SAT++ L + L +P
Sbjct: 223 --------LPRE-------RRT----------------FLFSATMSSKVEGLQRASLSNP 251
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L ++ +Y+ L Y L K K ++L+ LL + I+FT +V T RL L
Sbjct: 252 LRVSVSSNKYQTVSTLLQYYLFIPHKHKDVHLIWLLNEHVGQSVIIFTRTVHETMRLTIL 311
Query: 352 LNHFG 356
G
Sbjct: 312 ARALG 316
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L +RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR+LA Q+
Sbjct: 83 IQEKSIPIALQDRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTRELAHQI 141
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ ++ L + VG + + L K+P I+V
Sbjct: 142 GQAFEALGSSISLRCAVIVGGLDMVPQAVALGKKPH---------------------IIV 180
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 181 ATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLK-------------- 226
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SATL+ L + L P+ ++
Sbjct: 227 -FIPRE-------RRT----------------YLFSATLSSKVESLQRASLRDPVRVSVS 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L L+ K K YL+ L+ + IVFT +V T R+ LL G
Sbjct: 263 SNKYQTVSTLLQNLLVVPQKRKDTYLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLG 321
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 143/318 (44%), Gaps = 66/318 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +DL + TGSGKT ++ALPI+Q L A + A V+ PTR+LA+Q+
Sbjct: 35 IQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE-APQAFFACVLSPTRELAIQI 93
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L KRP ++V
Sbjct: 94 AEQFEALGSGIGIKCAVLVGGVDMVQQAINLAKRP---------------------HVVV 132
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL+DH+ T+GF+L L YLV+DE DRLL E ++ + +L NE
Sbjct: 133 GTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL------NE------- 179
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR + L SAT+T+ KL + L +P+ +
Sbjct: 180 --------------------------IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEA 213
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y + L+ +K K YLV +L + +VFT + ++T L +L + G
Sbjct: 214 A-TKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLG 272
Query: 357 ELRIKIKEYSGLQRQSVR 374
I I SG Q+ R
Sbjct: 273 LRAIPI---SGQMTQAKR 287
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 60/305 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ + ++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR
Sbjct: 78 YKTPTGIQAQSIPVALQGRDVIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTR 136
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 137 ELAAQIGQTFEALGALISLRCAVIVGGLDMVPQAVALGKKPH------------------ 178
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 179 ---VIVATPGRLVDHLEKTKGFSLRTLKYLVLDEADRLLDMDFGESIEKLLK-------- 227
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
F+P RR + SAT++ L + L P
Sbjct: 228 -------FIPRE-------RRT----------------YLFSATMSSSVESLQRASLRDP 257
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ ++ ++Y+ L+ + + K K YL+ ++ + CIVFT +V T R L
Sbjct: 258 VRVSVSASKYQTVSTLKQHYVFIPHKRKDTYLIHIINEFAGKSCIVFTRTVYETQRCAVL 317
Query: 352 LNHFG 356
L G
Sbjct: 318 LRTLG 322
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 140/325 (43%), Gaps = 68/325 (20%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQ 92
LD L AL GI+ P ++ Q+ + L R + S TG+GKTL+Y LPI+
Sbjct: 12 TLDTSLVEALAKKGITQ--PTEI---QKLMLTNLVNRQSILAISNTGTGKTLAYLLPIMH 66
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
TL + A+V+LPTR+L+ QV V A I +GL L +G + + + L RP
Sbjct: 67 TLLQDD-KYFYAMVILPTRELSQQVHAVLADIGAEIGLRTSLLIGATDLLSQGKSLAARP 125
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
I++ TPGR+ H+ T+G ++ YLV+DE DRLL
Sbjct: 126 H---------------------IVIGTPGRINHHLRNTKGISVSSFKYLVLDECDRLLDN 164
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
+ + +L++ S TFL
Sbjct: 165 DFDGDINNILEM--------ISPKYTFL-------------------------------F 185
Query: 273 SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
SATLT+ N + +++PL + +PE + + K K +YL +++ +LG
Sbjct: 186 SATLTKRVNAFKEKRMNNPLLYNVQKDE-GIPENILQQYIYLPQKYKEMYLYSIVHNLGS 244
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGE 357
KCIVF + + R+ +L GE
Sbjct: 245 RKCIVFVKTCITAERIERILRFLGE 269
>gi|169609619|ref|XP_001798228.1| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
gi|143462316|sp|Q0UK12.2|RRP3_PHANO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|160701880|gb|EAT84178.2| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
Length = 546
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 142/316 (44%), Gaps = 65/316 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + P+Q E+I L +D+ + TGSGKT ++ LPI+Q L ++ +
Sbjct: 129 ACENLGYKTATPIQT----ESIPLALAGKDIIGLAETGSGKTAAFVLPILQALLDKP-QA 183
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L++ PTR+LA Q+ A+ + + VG + + L KRP
Sbjct: 184 YFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPH-------- 235
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VA+PGRL+DH+ T+GF+L+HL YLV+DE DRLL + L +
Sbjct: 236 -------------IIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKI 282
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
++ D D T+L SAT++
Sbjct: 283 FKVLPRD------DRHTYL-------------------------------FSATMSSKVE 305
Query: 282 KLAQLDLHHPLFLTTGETRYKLPER-LESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
L + L +P+ ++ + +++ L+SY LI K K LYL+ LL I+FT
Sbjct: 306 SLQRAALKNPVRVSISSSSHQVVSTLLQSYMLIPH-KYKDLYLIHLLNDNIGHATILFTR 364
Query: 341 SVESTHRLCTLLNHFG 356
+V T RL LL G
Sbjct: 365 TVNETQRLAVLLRTLG 380
>gi|50302969|ref|XP_451422.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607669|sp|Q6CXB7.1|HAS1_KLULA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49640553|emb|CAH03010.1| KLLA0A09669p [Kluyveromyces lactis]
Length = 497
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A+ MG + + AV TI P L +D+ + TGSGKTL++ +P ++ L + +
Sbjct: 48 AIGKMGFTQM----TAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKP 103
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 104 RNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLMK-------- 155
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V+IL+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 156 -------------GVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEM 202
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ NE+R S M+ SAT T
Sbjct: 203 RQIIKIL--PNEDRQS-----------------------------------MLFSATQTT 225
Query: 279 DPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PLF+ E + LE ++CES + L L + L+ ++K I
Sbjct: 226 KVEDLARISLRPGPLFINVDSEKDTSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKVI 285
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + E G Q+Q R
Sbjct: 286 VFLSSCNSVKYYAELLNY---IDLPVLELHGKQKQQKR 320
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q +I P L +D+ + TGSGKT ++A+PI+ +L +
Sbjct: 83 PELLEACKNLNYSKPTPIQ----SRSIPPALKGKDIIGLAQTGSGKTAAFAIPILNSLWH 138
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 139 DQ-QPYYACILSPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKPH--- 194
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ TPGRLMDH+ TRGF+L +L YLV+DE DRLL +
Sbjct: 195 ------------------IIIGTPGRLMDHLENTRGFSLRNLKYLVMDEADRLLDMEFGP 236
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 237 VLDRILKIIPTQGR------TTYL-------------------------------FSATM 259
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ T+Y+ + L ++ +K YLV LL + I
Sbjct: 260 TSKIDKLQRASLTNPVKCAV-STKYQTVDTLVQTLMVVPGGVKDTYLVYLLNEFIGKSMI 318
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + R+ L N
Sbjct: 319 IFTRTKANAERISGLAN 335
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 142/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 84 PELIQACHNLNFSKPTPIQ----SKSIPPALEGHDIIGLAQTGSGKTAAFAIPILNKLWE 139
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ EL+++P
Sbjct: 140 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQSRELMRKPH--- 195
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 196 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 237
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + D +T+L SAT+
Sbjct: 238 VLDRILKIIPT------QDRTTYL-------------------------------FSATM 260
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ +Y+ E L ++ LK YL+ LL + I
Sbjct: 261 TSKIEKLQRASLTNPVKCAVS-NKYQTVETLVQTLMVVPGGLKNTYLIYLLNEFIGKSII 319
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + RL L N
Sbjct: 320 VFTRTKANAERLSALSN 336
>gi|116195380|ref|XP_001223502.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
gi|118595827|sp|Q2H1Q8.1|RRP3_CHAGB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|88180201|gb|EAQ87669.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
Length = 493
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 140/315 (44%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q QE+I L +RD+ + TGSGKT ++ALPI+Q L ++ +
Sbjct: 79 ACKELGWKKPTPIQ----QESIPLALQDRDIIGLAETGSGKTGAFALPILQALLDKP-QP 133
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 134 LFALVLAPTRELAAQIAQSFEALGSLISLRCALILGGLDMVQQAIALGKKPH-------- 185
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +
Sbjct: 186 -------------VVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILDKI 232
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 233 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 254
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ ++Y+ L + K YL+ L + I+FT +
Sbjct: 255 SLQRACLRDPLKVSISSSKYQTVSTLVQNYVFIPHTHKDTYLIYLCNEFAGQTIIIFTRT 314
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 315 VIETQRIAILLRTLG 329
>gi|363752775|ref|XP_003646604.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890239|gb|AET39787.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
Length = 500
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A++ MG +++ VQ +TI P + RD+ + TGSGKTL++ +P ++ L + +
Sbjct: 50 AIEKMGFTTMTQVQA----KTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKP 105
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 106 RNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLSK-------- 157
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++++ATPGRL+DH+ T+GF ++L L++DE DR+L ++ +
Sbjct: 158 -------------GVNLIIATPGRLLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEM 204
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ NE+R S M+ SAT T
Sbjct: 205 KQIIKIL--PNEDRQS-----------------------------------MLFSATQTT 227
Query: 279 DPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PLF+ E + LE ++CES + L L L+ +K I
Sbjct: 228 KVEDLARISLRPGPLFINVDSEKETSTVDGLEQGYVVCESDKRFLLLFTFLKKFQTKKII 287
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + E G Q+Q R
Sbjct: 288 VFLSSCNSVRYYAELLNY---IDLPVLELHGKQKQQKR 322
>gi|401411581|ref|XP_003885238.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
gi|325119657|emb|CBZ55210.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
Length = 569
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 74/345 (21%)
Query: 16 RSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCI 74
++P S F D + L +P +K AL M + L +Q P L E RD+
Sbjct: 74 KAPGKDSFFSDVAFESLDICEP-VKKALAEMKMERLTEIQAKAI-----PRLLEGRDVLG 127
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCL-----RALVVLPTRDLALQVKDVFAAIAPAVG 129
+ TGSGKTL++ +P V+ L V+ L +V+ PTR+L+LQ+ DV A ++ +
Sbjct: 128 AAKTGSGKTLAFLVPAVELLYQ--VKFLPRNGTGVIVISPTRELSLQIFDVAAELSKFLP 185
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
++GL +G ++ E+ ++LQ V+ILVATPGRL+DH+
Sbjct: 186 QTLGLVIGGANRKHEV---------------------EKLQKGVNILVATPGRLLDHLQN 224
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF +L LV+DE DR+L+ ++ + +LQ+ LP +T
Sbjct: 225 TKGFQYSNLLSLVIDEADRILQIGFEEEMNAILQM---------------LP------QT 263
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
+ C + SAT + LA+L L P+F+ +T + +
Sbjct: 264 RQTC-----------------LFSATQSAKVADLARLSLKKPVFVEVKDTVATVRGIQQG 306
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
Y ++C ++ + L L L+ E+K +VF SS S L N+
Sbjct: 307 Y-VVCPAEERFLLLFTFLKKNREKKIMVFFSSCMSVRFHDELFNY 350
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 68/333 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+QV E + L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 22 ACTKLGWKAPTPIQV----EALPLALQGRDLIGLAQTGSGKTAAFALPILQALFQQC-HP 76
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
A V+ PTR+LA+Q+ + F A+ +G+ VG S+ D+ L K P
Sbjct: 77 FFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGKNPH-------- 128
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L ++ YLV+DE D++L ++ + +
Sbjct: 129 -------------IVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEI 175
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + TFL SAT+T
Sbjct: 176 LKVVPRERK-------TFL-------------------------------FSATMTNKVA 197
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L +P + ++Y L+ + +K K Y V LL + +VFT +
Sbjct: 198 KLQRACLRNPTKVEV-SSKYTTALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRT 256
Query: 342 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ST RL +L G I I SG QS R
Sbjct: 257 CDSTRRLALILRSLGFGAIPI---SGQMSQSKR 286
>gi|302822183|ref|XP_002992751.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
gi|300139492|gb|EFJ06232.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
Length = 733
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 68/333 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+QV E + L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 188 ACTKLGWKAPTPIQV----EALPLALQGRDLIGLAQTGSGKTAAFALPILQALFQQ-CHP 242
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
A V+ PTR+LA+Q+ + F A+ +G+ VG S+ D+ L K P
Sbjct: 243 FFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGKNPH-------- 294
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L ++ YLV+DE D++L ++ + +
Sbjct: 295 -------------IVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEI 341
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + TFL SAT+T
Sbjct: 342 LKVVPRERK-------TFL-------------------------------FSATMTNKVA 363
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L +P + ++Y L+ + +K K Y V LL + +VFT +
Sbjct: 364 KLQRACLRNPTKVEV-SSKYTTALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRT 422
Query: 342 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ST RL +L G I I SG QS R
Sbjct: 423 CDSTRRLALILRSLGFGAIPI---SGQMSQSKR 452
>gi|328867087|gb|EGG15470.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 637
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 72/354 (20%)
Query: 26 DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLS 85
+ + LP ++ + K+A+ MG ++ P+Q ++I P L RD+ + TGSGKTL+
Sbjct: 146 NIEFEKLP-IEEKTKLAIATMGFKTMTPIQA----KSIVPLLQGRDMLGAARTGSGKTLA 200
Query: 86 YALPIVQTL--SNRAVRCLRALVVL-PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
+ +P ++ L SN R ++++ PTR+LALQ+ V A + + G+ +G +
Sbjct: 201 FLIPAIEVLVKSNFYPRNGTGVIIMSPTRELALQIYGVAAELMAHHSQTHGIIMGGADKK 260
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
E L+K V++LVATPGRL+DH+ TRGF +++L LV
Sbjct: 261 AEAERLVK---------------------GVNLLVATPGRLLDHLQNTRGFVVKNLKCLV 299
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DR+L ++ + +++L LP ER
Sbjct: 300 IDEADRMLEVGFEEEMHQIVKL---------------LPK-------------ERQ---- 327
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLKP 320
M+ SAT + + +A++ P+++ + R E LE ++C S+ +
Sbjct: 328 ------TMLFSATQSNKVDAIARVSFRSDPVYVGVDDDRQVSTVEGLEQGYVVCPSEKRF 381
Query: 321 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ +K IVF SS S LLN+ + I + + G Q+Q++R
Sbjct: 382 LLLYTFLKKNLNKKVIVFFSSCNSVKFHAELLNY---IDIPVLAFHGKQKQTLR 432
>gi|260948130|ref|XP_002618362.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
gi|238848234|gb|EEQ37698.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
Length = 560
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 79/348 (22%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ--- 92
+P LK A++ MG + VQ +TI P L RD+ + TGSGKTL++ LP ++
Sbjct: 105 EPTLK-AIRQMGFKKMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIELLY 159
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+L + +++ PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 160 SLKFKPRNGTGVVIISPTRELALQIFGVARELMEHHTQTFGIVIGGANRRQEADKLVK-- 217
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 218 -------------------GVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEI 258
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R S M+
Sbjct: 259 GFEEEMKQIIKIL--PNEDRQS-----------------------------------MLF 281
Query: 273 SATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ E+ + LE ++CES + L L + L+
Sbjct: 282 SATQTTKVEDLARMSLRPGPLYINVVPESAASTADGLEQGYVVCESDKRFLLLFSFLKRN 341
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
++K IVF SS C + +FGEL + + + G Q+Q+ R
Sbjct: 342 AKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQAKR 382
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 65/334 (19%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
L E+ D L + P++ A MG F + +E+I + RD+ + TGSGK
Sbjct: 78 LDENTTFDQL-GMHPQIIEACVRMG----FKKPTEIQRESIPHAIAGRDIIGLAQTGSGK 132
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
T ++A+PI+Q L ++ + L AL++ PTR+LA Q+ F A+ +G+ G+ VG +
Sbjct: 133 TAAFAIPILQQLL-QSPQPLFALILSPTRELAFQISQQFEALGAVIGVKCGVLVGGMDVM 191
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+ L ++P I+V TPGR+M H+ T+GF L+ L +LV
Sbjct: 192 QQAMVLARKPH---------------------IIVGTPGRVMYHLENTKGFHLKALKFLV 230
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL ++ + +L++ N N +
Sbjct: 231 MDEADRLLSMDFEEEINKILKVI-PKNRNTY----------------------------- 260
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 322
+ SAT+T KL + L +P+ + T+Y + L + K Y
Sbjct: 261 --------LFSATMTSKVAKLQKASLVNPIKVQVASTKYSTVDTLVQQYCFIPYQHKDCY 312
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
L +L L IVF ++ +++RL +L + G
Sbjct: 313 LTYILNELSGNSAIVFVATCAASNRLSVMLRNLG 346
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 143/319 (44%), Gaps = 65/319 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ + F A+ A+GL + VG ++ + KRP I
Sbjct: 110 QIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGKRPH---------------------I 148
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+V TPGRL+DH+ T+GF+L+ + YLV+DE D+LL ++ L +L+ D
Sbjct: 149 VVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDILREIPKDRR----- 203
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
TFL SAT+T+ NKL + L +P +
Sbjct: 204 --TFL-------------------------------FSATMTKKVNKLQRACLRNPAKVE 230
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y + L+ + K YL+ +L + ++F + EST L +L +
Sbjct: 231 AA-SKYSTVDSLKQEFYFVPADDKDCYLLHVLNERQDSMIMIFVRTCESTRLLALMLRNL 289
Query: 356 GELRIKIKEYSGLQRQSVR 374
G +K SG Q R
Sbjct: 290 G---LKAMSISGQMSQDKR 305
>gi|324513918|gb|ADY45697.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 435
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 61/278 (21%)
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKT ++ALPI+Q L + + L AL++ PTR+LA Q+ + F A+ ++GL V + VG
Sbjct: 37 GSGKTAAFALPILQALLDTPQK-LFALILTPTRELAFQIAEQFDALGASIGLLVAVIVGG 95
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
+ + L KRP ++VATPGRL+DH+ T+GF L L
Sbjct: 96 VDMVTQALALAKRPH---------------------VIVATPGRLVDHLENTKGFNLRAL 134
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
+LV+DE DR+L ++ L +L++ LP RR
Sbjct: 135 KFLVMDEADRILNMDFEVELDKILKV---------------LPKE-------RRT----- 167
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 318
+ SAT+T+ KL + L P + ++YK ++L+ + + K
Sbjct: 168 -----------YLYSATMTKKVAKLERASLRDPARVEVC-SKYKTVDKLKQHYIFIPQKY 215
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K YLV +L + + IVF ++ ST + +L G
Sbjct: 216 KEAYLVYILNEMAGQTAIVFCATCASTMKTALMLRQLG 253
>gi|399218638|emb|CCF75525.1| unnamed protein product [Babesia microti strain RI]
Length = 522
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 74/365 (20%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
S S F D L +P +K ++ + G + + P+Q E+I L +D+ ++
Sbjct: 38 SDAQKSYFSDLKFTSLDISEPLMK-SISDAGFTQMTPIQA----ESIPLLLAGKDVLGSA 92
Query: 77 PTGSGKTLSYALPIVQTL-------SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
TGSGKTL++ +P++ L S R +++ PTR+L+LQ+ +V + +
Sbjct: 93 KTGSGKTLAFLIPMIDILYKKWYWRSGRFWHIFTLVIISPTRELSLQIFNVGKQLCELLP 152
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
++GL +G ++ E+ L K ++ILVATPGRL+DH+
Sbjct: 153 QTIGLVIGGANRKMEVDRLNK---------------------GINILVATPGRLLDHMQN 191
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF ++L L +DE DR+L ++ + ++++ LP K
Sbjct: 192 TKGFVFKNLLLLTIDEADRILEIGFEEDMNNIIKM---------------LP------KK 230
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
+ C + SAT T LA+L L+ P+ + +T LE
Sbjct: 231 RQTC-----------------LFSATNTNKVQDLARLSLNKPVSVKITDTPTATVSGLEQ 273
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 369
+IC+++ + L L + L+ +KC+VF S+ S L+N+ + +K G +
Sbjct: 274 GYVICDAEKRFLLLFSFLKKNSNKKCMVFFSTCNSVKFHDELMNY---IDLKTTCIHGKK 330
Query: 370 RQSVR 374
+QS R
Sbjct: 331 KQSNR 335
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 137/320 (42%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV ++I L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 118 PQIVEACTNMGFKHPTPIQV----KSIPEALQSRDVIGLAQTGSGKTAAFTIPILQALWD 173
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+ A+ +G+ VG + + L KRP
Sbjct: 174 NP-KPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH--- 229
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRL DH+ T+GF+L L YLV+DE DRLL +
Sbjct: 230 ------------------VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGP 271
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +LQ S+ RR M+ SAT+
Sbjct: 272 IIDKLLQ----------------------SIPRERRT----------------MLFSATM 293
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ + +T+Y L+ + L K YLV L I
Sbjct: 294 TTKVAKLQRASLKNPVRVEV-DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSII 352
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V + RL LL G
Sbjct: 353 VFTRTVHDSQRLSILLRLLG 372
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA Q+
Sbjct: 88 IQEQSIPLALQGRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAAQI 146
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ + L L +G + + L K+P ++V
Sbjct: 147 TQAFEALGSLISLRCALILGGLDMVQQAIALGKKPH---------------------VVV 185
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L+
Sbjct: 186 ATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILK-------------- 231
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
FLP RR + SAT++ L + L PL ++
Sbjct: 232 -FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSIS 267
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ L L K YL+ L + I+FT +V T R+ LL G
Sbjct: 268 SSKYQTVATLVQNYLFIPHMHKDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLG 326
>gi|344300784|gb|EGW31105.1| ATP-dependent RNA helicase HAS1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 560
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 92/392 (23%)
Query: 3 EAKKKSM----PVLPWMRSPVDVS-----------LFEDCPLDHLPCLDPRLKVALQNMG 47
+AK+KS P +P +PV+ S F+D L +P +K A+ MG
Sbjct: 63 DAKRKSKAVEEPAIPEY-TPVESSDKSKEENEEDVFFKDAELS-----EPTMK-AITEMG 115
Query: 48 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA--- 104
+ + VQ +TI P L RD+ + TGSGKTL++ +P ++ L + ++
Sbjct: 116 FTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKIKPRNGTAV 171
Query: 105 LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 164
+++ PTR+LALQ+ V + + G+ +G AD +E +K
Sbjct: 172 IIITPTRELALQIFGVARQLMEHHSQTCGIVIGG---ADRRAEAVK-------------- 214
Query: 165 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 224
L V++LVATPGRL+DH+ T GF +L LV+DE DR+L ++ + ++++
Sbjct: 215 ----LGKGVNLLVATPGRLLDHLKNTPGFVFNNLKALVIDEADRILEIGFEDEMKQIIKI 270
Query: 225 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 284
NENR S M+ SAT T LA
Sbjct: 271 L--PNENRQS-----------------------------------MLFSATQTTKVEDLA 293
Query: 285 QLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 342
++ L PL++ ET + LE ++C+S + L L + L+ ++K IVF SS
Sbjct: 294 RISLRPGPLYINVVPETDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNIKKKIIVFLSSC 353
Query: 343 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S LLN+ + + + + G Q+Q R
Sbjct: 354 NSVKFYSELLNY---IDLPVLDLHGKQKQQKR 382
>gi|254571715|ref|XP_002492967.1| Nucleolar DEAD-box protein required for ribosome assembly and
function [Komagataella pastoris GS115]
gi|238032765|emb|CAY70788.1| Nucleolar DEAD-box protein required for ribosome assembly and
function [Komagataella pastoris GS115]
gi|328353020|emb|CCA39418.1| ATP-dependent RNA helicase DDX27 [Komagataella pastoris CBS 7435]
Length = 761
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 71/318 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK L +G + P+Q A +I GL +D+ + TGSGKT +Y +PI++ L
Sbjct: 257 PVLK-GLSTLGYTKPSPIQSA----SIPIGLLGKDIVAGAQTGSGKTAAYMIPIIERLLF 311
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ R +V+ PTR+LA+QV DV I+ V G+ GLAVG ++ + EL KRP
Sbjct: 312 KPSKISATRVVVLTPTRELAIQVNDVGKKISQFVNGIEFGLAVGGLNLRKQEQELRKRP- 370
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F++E + LV+DE DR+L +
Sbjct: 371 --------------------DIVIATPGRFIDHIRNSPSFSVESVEILVIDEADRMLEDG 410
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L +L T LP G +T M+ S
Sbjct: 411 FQEELKEIL---------------TLLP---GKKQT--------------------MLFS 432
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLG- 331
AT+ L QL LH P+ + + + ++ + +L ++KP L +L +
Sbjct: 433 ATMNNSIKDLIQLSLHKPVRIMIDPPKQAVSGLVQEFVRLRKNLEMKPALLFDILTKVNP 492
Query: 332 --EEKCIVFTSSVESTHR 347
+ + +VF + H+
Sbjct: 493 SQQHRIVVFIARKMDAHK 510
>gi|384491674|gb|EIE82870.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 765
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 159/351 (45%), Gaps = 72/351 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L C D R K A++++ + VQ TI P + RD+ + TGSGKTL++ +
Sbjct: 308 FESLDCCD-RTKNAIKDLAFEKMTEVQA----RTIPPLMAGRDVLGAAKTGSGKTLAFLI 362
Query: 89 PIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P V+ L + A++V PTR+LALQ+ V + ++ G+ +G ++ E
Sbjct: 363 PAVEMLYRLKFKPRNGTGAIIVSPTRELALQIFGVAKELLKYHQMTFGIVIGGANRKAEA 422
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L+K V+++VATPGRL+DH+ TRGF ++L L++DE
Sbjct: 423 DKLVK---------------------GVNLIVATPGRLLDHLQNTRGFVYKNLKALIIDE 461
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ LPS ER
Sbjct: 462 ADRILEIGFEEEMRQIIKI---------------LPS-------------ERQ------- 486
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PL++ E R + LE ++C+S + L L
Sbjct: 487 ---TMLFSATQTTKVQDLARISLKKGPLYINVHENRDTSTADGLEQGYVVCDSDRRFLLL 543
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ ++K IVF SS S LLN+ + + + G Q+Q R
Sbjct: 544 FTFLRKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLALHGKQKQQKR 591
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 135/320 (42%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 130 PQIVEACTNMGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 185
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+ A+ +G+ VG + + L KRP
Sbjct: 186 NP-KPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH--- 241
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRL DH+ T+GF+L L YLV+DE DRLL +
Sbjct: 242 ------------------VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGP 283
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +LQ S+ RR M+ SAT+
Sbjct: 284 IIDKLLQ----------------------SIPRERRT----------------MLFSATM 305
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ + +T+Y L+ + L K YLV L I
Sbjct: 306 TTKVAKLQRASLKNPVRVEV-DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSII 364
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V + RL LL G
Sbjct: 365 VFTRTVHDSQRLSILLRLLG 384
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 61/296 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L +D+ + TGSGKT ++ LPI+Q L ++ R L AL++ PTR+LA Q+ +
Sbjct: 24 EAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLDKPQR-LFALILTPTRELAFQISEQ 82
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
A+ ++G+ + +G + + L K+P I++ TP
Sbjct: 83 IEALGSSIGVQCAVIIGGIDMMTQSIMLAKKP---------------------HIIIGTP 121
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL DH+ T+GF+L L YLV+DE DR+L ++A + +L + L
Sbjct: 122 GRLADHLANTKGFSLRPLKYLVMDEADRILNMDFEAEVDKIL---------------SVL 166
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
P RR + SAT+T+ KL + + P+ + T+
Sbjct: 167 PKE-------RRT----------------YLFSATMTKKVKKLQRASVQDPVKIEVS-TK 202
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
Y E+L+ + +K K YLV++L L +VF ++ +T R+ +L + G
Sbjct: 203 YTTVEKLQQTYIFVPAKYKDCYLVSILNELAGNSFMVFCATCINTQRIGLMLRNLG 258
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 60/301 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L RD+ + TGSGKT ++ALPI+Q L + + LV+ PTR
Sbjct: 78 FKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPILQALLHDP-QPFFGLVLAPTR 136
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 137 ELAYQISQQFEALGSLIRVRCAVIVGGMDMVPQAIALAKKPH------------------ 178
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L YL++DE DRLL + L +LQ+
Sbjct: 179 ---IVVATPGRLLDHLENTKGFSLRSLKYLIMDEADRLLDLDFGPILDKILQV------- 228
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR + SAT+ + L + L +P
Sbjct: 229 --------LPRE-------RRTA----------------LFSATMNTKLDNLTRAALRNP 257
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ ++ + Y+ L + K K +YL+ LL + CI+FT +V T RL L
Sbjct: 258 VRVSISTSSYQTVANLLQQYIFIPHKHKDVYLIHLLTEFSGQTCILFTRTVTETQRLAFL 317
Query: 352 L 352
L
Sbjct: 318 L 318
>gi|407918962|gb|EKG12222.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 523
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 66/325 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L + + A+Q MG +++ VQ ++ I P L RD+ + TGSGKTL++ +P+V+ L
Sbjct: 116 LSDKTQKAIQEMGFTTMTEVQ----KKAIPPLLAGRDVLGAAKTGSGKTLAFLIPVVEML 171
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
+ + A+V+ PTR+LALQ+ V + + G+ +G A+ +E IK
Sbjct: 172 HSLRFKPRNGTGAIVISPTRELALQIFGVARELMEHHTQTFGIVMGG---ANRKAEQIK- 227
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
L+ V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L
Sbjct: 228 -----------------LEKGVNLLIATPGRLLDHLQNTPGFVFKNLRTLVLDEADRILE 270
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ L ++++ + ++ + + +
Sbjct: 271 VGFEDELKAIVKILGNPDQRQTA------------------------------------L 294
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PLF++ + + + LE ++CES L+ L L+
Sbjct: 295 FSATQTTKVEDLARISLKPGPLFISVDHYKEHSTADSLELGYVVCESDLRFRLLFTFLKK 354
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNH 354
++K IVFTSS S L +LLN+
Sbjct: 355 HQKKKIIVFTSSCASVEYLTSLLNY 379
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 136/300 (45%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L RD+ + TGSGKT ++A+P++Q+L + L +V+ PTR+LA Q+
Sbjct: 90 IQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENP-QPLYCVVLAPTRELAYQI 148
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ A+GL + VG ++ + L K+P ++V
Sbjct: 149 SETFEALGSAMGLRTAVVVGGMNMMTQAVALSKKPH---------------------VIV 187
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L +LV+DE DRLL D E
Sbjct: 188 ATPGRLVDHLENTKGFSLRTLKFLVMDEADRLL-----------------DME------- 223
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
F PS LK I PR L SAT+T KL + L P+ +
Sbjct: 224 -FGPSLDKILKVI--------------PRQRNTYLFSATMTSKVEKLQRASLVDPVRVAV 268
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y+ + L Y + C K K +LV L+ I+F + T R+ LL + G
Sbjct: 269 S-TKYQTADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLG 327
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 154/353 (43%), Gaps = 74/353 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L P LK L ++G + P+Q A TI L +D+ + TGSGKT ++ +
Sbjct: 221 FNSLSLSRPVLK-GLGDLGYTRPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMI 275
Query: 89 PIVQTLSNRAVR--CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEI 145
PI++ L + + R +V+ PTR+LA+QV DV + V GL+ GLAVG ++ +
Sbjct: 276 PIIERLLYKPAKIASTRVIVLTPTRELAIQVSDVAKKLGKYVSGLTFGLAVGGLNLRQQE 335
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
L RP DI+VATPGR +DHI + F ++ + LV+DE
Sbjct: 336 QSLKARP---------------------DIVVATPGRFIDHIRNSASFNVDSVEVLVIDE 374
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L E +Q L +L L LPS +L
Sbjct: 375 ADRMLEEGFQEELNEILSL---------------LPSKRQTL------------------ 401
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKP---L 321
+ SAT+ +L L L P+ + + + + + ++ LKP
Sbjct: 402 -----LFSATMNSKIKQLVSLTLKRPVRVMIDPPKQAASKLTQEFVRIRKRDHLKPSVLF 456
Query: 322 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+L+ L G+++ +VF + E HRL +L G L I + E G Q R
Sbjct: 457 HLIKKLDGTGQKRMVVFVARKEMAHRLRIIL---GLLGISVGELHGSLSQEQR 506
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 141/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ P+Q I P L RD+ + TGSGKT ++A+PI+ L
Sbjct: 81 PELIEACKNLNFDKPTPIQA----RAIPPALEGRDIIGLAQTGSGKTAAFAIPILNRLWE 136
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q K+ F ++ +G+ VG ++ D+ EL+++P
Sbjct: 137 DK-QPYYACVLAPTRELAQQTKETFDSLGALMGVRSTCIVGGMNMMDQARELMRKPH--- 192
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 193 ------------------IIIATPGRLMDHLENTKGFSLRKLRFLVMDEADRLLDMEFGP 234
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + D +T+L SAT+
Sbjct: 235 VLDKILKVIPT------QDRTTYL-------------------------------FSATM 257
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L P+ +Y+ + L ++ S LK YL+ LL + I
Sbjct: 258 TSKIDKLQRASLTEPVKCAVS-NKYQTVDTLVQTLMVVPSGLKNTYLIYLLNENIGKTVI 316
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 317 IFTRTKANAERLSALCN 333
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 131/299 (43%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 39 IQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQKLWEEP-KGLFACVMAPTRELAYQI 97
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F ++ A+G+ VG I D+ L KRP I+V
Sbjct: 98 SQQFESLGSAIGVRCATIVGGMPIMDQAVALAKRPH---------------------IVV 136
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL DH+ T+GF+L L +LV+DE DRLL + + +L++ + +
Sbjct: 137 ATPGRLNDHLENTKGFSLRGLKFLVMDEADRLLDMDFGPIIDKILKVIPKER-------T 189
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL + L +P+ +
Sbjct: 190 TYL-------------------------------FSATMTTKVAKLQRASLSNPVRVEVS 218
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
E +Y L Y L K ++L+ L SL + I+FT +V RL +L G
Sbjct: 219 E-KYSTVSTLLQYYLFIPLVQKDVHLIYLANSLAQNSIIIFTRTVHDAQRLSIILRTLG 276
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 73/328 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 224 PVLK-GLSSLGFTKPSPIQSA----TIPIALLGKDIVAGAVTGSGKTAAFMIPIIERLLY 278
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ V R +++ PTR+LA+Q+ DV I V GL+ GLAVG ++ + L RP
Sbjct: 279 KPAKVASTRVVILTPTRELAIQISDVAKKIGHFVNGLTFGLAVGGLNLRQQEQILKSRP- 337
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DH+ + F+++ + LV+DE DR+L E
Sbjct: 338 --------------------DIVIATPGRFIDHVRNSASFSVDRVEILVLDEADRMLEEG 377
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ T LP+ R ++ S
Sbjct: 378 FQDELSEIM---------------TLLPT-----------------------RRQNLLFS 399
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLICESKLKP--LY-LVALLQ 328
AT+ +L L L P+ + + + +RL E ++ LKP LY L+ L
Sbjct: 400 ATMNSKIKQLVSLSLKKPVRIMIDPPK-QAADRLVQEFVRIRKRDHLKPALLYNLIRKLD 458
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFG 356
S G+++ +VF S E HRL +L G
Sbjct: 459 STGQKRIVVFVSRKEVAHRLRIILGLLG 486
>gi|223590217|sp|A5DID7.2|HAS1_PICGU RecName: Full=ATP-dependent RNA helicase HAS1
gi|190346774|gb|EDK38940.2| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 164/360 (45%), Gaps = 84/360 (23%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
FED L +P ++ A+++MG + VQ ++TI P L RD+ + TGSGKT
Sbjct: 107 FEDLGLS-----EPTMR-AIKDMGFEKMTKVQ----EKTIPPLLAGRDVLGAAKTGSGKT 156
Query: 84 LSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
L++ +P ++ L + + +VV PTR+LALQ+ V + ++G+ +G ++
Sbjct: 157 LAFLIPAIEMLYSLKFKPRNGTGVIVVSPTRELALQIFGVARDLMAHHSQTLGIVIGGAN 216
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L+K V++L+ATPGRL+DH+ T+GF ++L
Sbjct: 217 RRQEADKLMK---------------------GVNLLIATPGRLLDHLQNTKGFIFKNLKA 255
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + ++++ SD
Sbjct: 256 LVIDEADRILEIGFEDEMKQIIKVLPSDERQ----------------------------- 286
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKL 318
M+ SAT T LA++ L PL++ ET + LE + C+S +
Sbjct: 287 --------SMLFSATQTTKVEDLARISLRAGPLYINVVPETEVSTADGLEQGYVTCDSDM 338
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 339 RFLLLFSFLRRNIKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 391
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 133/305 (43%), Gaps = 61/305 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + + E + L RD+ + TGSGKT ++ LPI+Q L + L A V+ PTR
Sbjct: 37 FKIPTEIQVEALPHALEGRDIIGVAATGSGKTAAFGLPILQKLWEEP-KGLFACVLAPTR 95
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ ++ A+G + VG + + L KRP
Sbjct: 96 ELAYQISQQLESLGSAMGARCAVIVGGMDMPAQAIALAKRPH------------------ 137
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRLMDH+ T+GF L ++ +LV+DE DRLL + + +L+L +
Sbjct: 138 ---IVVATPGRLMDHLEKTKGFNLRNIKFLVLDEADRLLDLDFGTIIDKILKLIPKER-- 192
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
+T+L SAT+T KL + L +P
Sbjct: 193 -----TTYL-------------------------------FSATMTTKVAKLQRASLSNP 216
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ + T+Y+ L Y L+ K K YLV L +L + I+FT +V RL +
Sbjct: 217 VRVEV-STKYQTVSTLLQYYLLMPLKDKDAYLVYLANTLAQNSIIIFTRTVHDASRLSII 275
Query: 352 LNHFG 356
L G
Sbjct: 276 LRTLG 280
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 131/296 (44%), Gaps = 75/296 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I P L RD+ +PTGSGKT+++ALPI+ L + ALV+ PTR+LA Q+
Sbjct: 33 IQAECIPPALSGRDIIGIAPTGSGKTIAFALPILHRLWDNPQSNF-ALVLSPTRELAYQI 91
Query: 118 KDVFAAIAPAVGL-SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
F A+ A+G+ SV + G+ + L K+P I+
Sbjct: 92 SAQFEALGAAMGVRSVVIVGGEEDRVQQAVRLAKKPH---------------------II 130
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL DH+N+T+GF+L L +LV+DE DRL +P +
Sbjct: 131 VATPGRLHDHLNSTKGFSLRQLKHLVLDEADRL-------AIP--------------RER 169
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
ST+L SAT+T + KL + L P+ +
Sbjct: 170 STYL-------------------------------FSATMTANVTKLQRASLTDPVRVDV 198
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+YK L Y ++C K + LV L+ S+ + IVF +V RL +L
Sbjct: 199 SSFKYKTVPSLLQYYVLCPLVNKEVMLVYLINSMAQNTIIVFVRTVADAKRLSIVL 254
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQALLENPQRYF-ALILTPTRELAFQI 103
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ A+ ++G+ + VG + + L K+P I++
Sbjct: 104 SEQIEALGSSIGVKCAVIVGGMDMMAQSLMLAKKPH---------------------III 142
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L +L LV+DE DR+L ++ + +L++ +
Sbjct: 143 ATPGRLVDHLENTKGFSLRNLKVLVMDEADRILNMDFEEEVDKILKVIPRERR------- 195
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T+ KL + L P+ +
Sbjct: 196 TFL-------------------------------FSATMTKKVQKLHRASLVDPVRVEVS 224
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+++ E+L+ Y + K K +YLV +L + +VF ++ T R+ LL + G
Sbjct: 225 -TKFQTVEQLQQYYIFIPVKYKDVYLVHILNEMAGNSFMVFMATCNGTVRVALLLRNLG 282
>gi|149235261|ref|XP_001523509.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060561|sp|A5E6W6.1|RRP3_LODEL RecName: Full=ATP-dependent rRNA helicase RRP3
gi|146452918|gb|EDK47174.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 68/340 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++Q++ + P+Q A I L +D+ + TGSGKT ++A+PI+QTL
Sbjct: 105 LVPELLESIQSLKYTQPTPIQAAA----IPHALQGKDIVGIAETGSGKTAAFAIPILQTL 160
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
A + ALV+ PTR+LA Q+K+ F A+ ++GL +G S+ ++ +L+++P
Sbjct: 161 YT-AAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPH- 218
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
+++ATPGRL+DH+ T+GF+L+ L YLV+DE DR++ Y
Sbjct: 219 --------------------VIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDY 258
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ +L K P + + + +A
Sbjct: 259 AKAIDQIL-------------------------------------KQIPSHQRITYLYTA 281
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T++++ K + L+ P+ + + K+P++L+ + K L+ ++ ++
Sbjct: 282 TMSREIEKFKR-SLNSPVQVEIVKLE-KVPDKLKQTMCLTSPNTKDTRLIQIVNLDSMKR 339
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
I+FT +V T R C +L + G K E G QS R
Sbjct: 340 VIIFTRTVVHTRRCCLMLLNLG---FKCVELHGQMPQSRR 376
>gi|146418687|ref|XP_001485309.1| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 164/360 (45%), Gaps = 84/360 (23%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
FED L +P ++ A+++MG + VQ ++TI P L RD+ + TGSGKT
Sbjct: 107 FEDLGLS-----EPTMR-AIKDMGFEKMTKVQ----EKTIPPLLAGRDVLGAAKTGSGKT 156
Query: 84 LSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
L++ +P ++ L + + +VV PTR+LALQ+ V + ++G+ +G ++
Sbjct: 157 LAFLIPAIEMLYSLKFKPRNGTGVIVVSPTRELALQIFGVARDLMAHHSQTLGIVIGGAN 216
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L+K V++L+ATPGRL+DH+ T+GF ++L
Sbjct: 217 RRQEADKLMK---------------------GVNLLIATPGRLLDHLQNTKGFIFKNLKA 255
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + ++++ SD
Sbjct: 256 LVIDEADRILEIGFEDEMKQIIKVLPSDERQ----------------------------- 286
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKL 318
M+ SAT T LA++ L PL++ ET + LE + C+S +
Sbjct: 287 --------SMLFSATQTTKVEDLARISLRAGPLYINVVPETEVSTADGLEQGYVTCDSDM 338
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 339 RFLLLFSFLRRNIKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 391
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 65/319 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ + F A+ A+GL + VG ++ + KRP I
Sbjct: 110 QIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGKRPH---------------------I 148
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+V TPGRL+DH+ T+GF+L+ + YLV+DE D+LL ++ L +L D
Sbjct: 149 VVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR----- 203
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
TFL SAT+T+ NKL + L +P +
Sbjct: 204 --TFL-------------------------------FSATMTKKVNKLQRACLRNPAKVE 230
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y + L+ + K YL+ +L E ++F + EST L +L +
Sbjct: 231 V-SSKYSTVDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNL 289
Query: 356 GELRIKIKEYSGLQRQSVR 374
G +K SG Q R
Sbjct: 290 G---LKAMSISGQMSQDKR 305
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q +I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 95 PELIEACKNLNFAKPTPIQA----RSIPPALQGHDIIGLAQTGSGKTAAFAIPILNRLWH 150
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 151 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARDLMRKPH--- 206
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ TRGF+L L +LV+DE DRLL +
Sbjct: 207 ------------------IIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGP 248
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 249 VLDRILKIIPTQGR------TTYL-------------------------------FSATM 271
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ L+ + I
Sbjct: 272 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLIVVPGGLKNTYLIYLMNEFIGKTII 330
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + R+ TL N
Sbjct: 331 VFTRTKANAERITTLAN 347
>gi|50427631|ref|XP_462428.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
gi|74600402|sp|Q6BH93.1|HAS1_DEBHA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49658098|emb|CAG90938.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
Length = 568
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 79/348 (22%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
+P LK A+++MG S + VQ +TI P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 113 EPTLK-AIKDMGFSKMTQVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLY 167
Query: 96 N---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + +VV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 168 SLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQEAEKLMK-- 225
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++L+ATPGRL+DH+ T+GF +++ LV+DE DR+L
Sbjct: 226 -------------------GVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEI 266
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R S M+
Sbjct: 267 GFEEEMKQIIKIL--PNEDRQS-----------------------------------MLF 289
Query: 273 SATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ E+ LE ++CES + L L + L+
Sbjct: 290 SATQTTKVEDLARISLRPGPLYINVASESEASTVAGLEQGYVVCESDKRFLLLFSFLKRN 349
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 350 VKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 390
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 65/319 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ + F A+ A+GL + VG ++ + KRP I
Sbjct: 110 QIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGKRPH---------------------I 148
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+V TPGRL+DH+ T+GF+L+ + YLV+DE D+LL ++ L +L D
Sbjct: 149 VVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR----- 203
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
TFL SAT+T+ NKL + L +P +
Sbjct: 204 --TFL-------------------------------FSATMTKKVNKLQRACLRNPAKVE 230
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y + L+ + K YL+ +L E ++F + EST L +L +
Sbjct: 231 V-SSKYSTVDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNL 289
Query: 356 GELRIKIKEYSGLQRQSVR 374
G +K SG Q R
Sbjct: 290 G---LKAMSISGQMSQDKR 305
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 135/320 (42%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 124 PQIIEACTNMGFQHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 179
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+ A+ +G+ VG + + L KRP
Sbjct: 180 NP-KPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH--- 235
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRL DH+ T+GF+L L YLV+DE DRLL +
Sbjct: 236 ------------------VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGP 277
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +LQ S+ RR M+ SAT+
Sbjct: 278 IIDKLLQ----------------------SIPRERRT----------------MLFSATM 299
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ + +T+Y L+ + L K YLV L I
Sbjct: 300 TTKVAKLQRASLKNPVRVEV-DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSII 358
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V + RL LL G
Sbjct: 359 VFTRTVHDSQRLSILLRLLG 378
>gi|171656|gb|AAA34666.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
Length = 722
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 149/341 (43%), Gaps = 83/341 (24%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +
Sbjct: 203 FNSLSLSRPVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMI 257
Query: 89 PIVQTLSNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEI 145
PI++ L + + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ +
Sbjct: 258 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 317
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
L RP DI++ATPGR +DHI + F ++ + LV+DE
Sbjct: 318 QMLKSRP---------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDE 356
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L E +Q L ++ L S+ +N
Sbjct: 357 ADRMLEEGFQDELNEIMGLLPSNRQN---------------------------------- 382
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKL 318
++ SAT+ L L L P+ + P + + KL E L
Sbjct: 383 ----LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHL 432
Query: 319 KPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
KP L L++ L G+++ +VF + E+ HRL ++ G
Sbjct: 433 KPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 473
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R ALV+ PTR+LA Q+
Sbjct: 81 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-ALVLTPTRELAFQI 139
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 140 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 178
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 179 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 225
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 226 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEV- 259
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 260 SNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 318
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 136/318 (42%), Gaps = 64/318 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQ 116
+ E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q
Sbjct: 9 IQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQ 68
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ F A+ A+ L + +G + L KRP ++
Sbjct: 69 IAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPH---------------------VV 107
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V TPGRL+DH+ T+GF+ L YLV+DE D LL+ +Q + +L + +
Sbjct: 108 VGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERR------ 161
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
TFL SAT+T+ KL + L +P+ +
Sbjct: 162 -TFL-------------------------------FSATMTEKVKKLRRACLKNPVKVEV 189
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y L + L + +K K YL+ +L + +VF + EST L +L +
Sbjct: 190 A-SKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN-- 246
Query: 357 ELRIKIKEYSGLQRQSVR 374
LR K SG Q R
Sbjct: 247 -LRFKAISISGQMSQDKR 263
>gi|50419843|ref|XP_458454.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
gi|74659385|sp|Q6BTL5.1|DRS1_DEBHA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49654120|emb|CAG86536.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
Length = 771
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 154/351 (43%), Gaps = 85/351 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G + P+Q A I L +D+ + TGSGKT +Y +PI++ L
Sbjct: 268 PVLK-GLSQLGYTKPSPIQSAC----IPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLY 322
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+ PTR+LA+QV DV I V L+ GLAVG ++ + +L RP
Sbjct: 323 KPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRP- 381
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGRL+DHI + F+++ L LV+DE DR+L E
Sbjct: 382 --------------------DIVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEG 421
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+QA L +L L P + ++ S
Sbjct: 422 FQAELTEILSLI-------------------------------------PRHKRQTLLYS 444
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L QL L P+ + P + + KL+ E LKP L L
Sbjct: 445 ATMNTKIQDLIQLSLQKPVRVMID------PPKSAAIKLVQEFVRIRKRDHLKPALLFQL 498
Query: 327 LQSLG---EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++S+ + + +VF + ES H+L +L G L +++ E G Q R
Sbjct: 499 IKSVDPSQQNRIVVFVARKESAHKLRIIL---GLLGMRVSELHGSLTQEQR 546
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 83 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 141
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 142 GEQFEALGSGIGIKCCVIVGGMDMVAQGLQLAKKPH---------------------III 180
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 181 ATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 227
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 228 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ ++L+ Y L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 263 -NKYQTVDQLQQYYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 320
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 85 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 143
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 144 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 182
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 183 ATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 229
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 230 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 264
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ ++L+ Y + K K +YLV +L L ++F S+ +T + +L G
Sbjct: 265 -NKYQTVDQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 322
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 135/320 (42%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 113 PQIVEACTNMGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 168
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+ A+ +G+ VG + + L KRP
Sbjct: 169 NP-KPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH--- 224
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRL DH+ T+GF+L L YLV+DE DRLL +
Sbjct: 225 ------------------VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGP 266
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +LQ S+ RR M+ SAT+
Sbjct: 267 IIDKLLQ----------------------SIPRERRT----------------MLFSATM 288
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ + +T+Y L+ + + K YLV L I
Sbjct: 289 TTKVAKLQRASLKNPVRVEV-DTKYTTVSTLKQHYMFMPFAHKDTYLVHLANEQAGHSII 347
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT +V + RL LL G
Sbjct: 348 VFTRTVHDSQRLSILLRLLG 367
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ LPI+Q+L R + ++V+ PTR+L +Q+
Sbjct: 55 IQREAIPIALRGGDIIGLAETGSGKTGAFILPILQSLLENQSR-MYSVVLAPTRELCVQI 113
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F+A+ + L V VG + ++ L K+P I+V
Sbjct: 114 SEQFSALGSLISLQVANIVGGMDMVNQALSLAKKPH---------------------IIV 152
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A+PGRL+DH+ T+GF + + YLV+DE DRLL ++ L +++ N N +
Sbjct: 153 ASPGRLVDHLENTKGFNISSVKYLVMDEADRLLSMDFEIALTKIIEAC-PKNRNTY---- 207
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+ SAT+T KL ++ L +P+ +
Sbjct: 208 ---------------------------------LFSATMTTKVAKLQRVSLKNPVKICV- 233
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y E L Y + K K YLV L+Q+L + I+FT++ S R L+ G
Sbjct: 234 NTKYDTAENLLQYYMFIPFKFKWSYLVILVQNLSQYTGIIFTNTCISCKRGALLMQQLG 292
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 60/301 (19%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
A+ + I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA
Sbjct: 82 TAIQAKAIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAA 140
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F A+ + L + VG + + L K+P I
Sbjct: 141 QIGQSFEALGALISLRCAVIVGGLDMVPQAIALGKKPH---------------------I 179
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 180 IVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK------------ 227
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
F+P RR + SATL+ L + L P+ ++
Sbjct: 228 ---FIPRE-------RRT----------------YLFSATLSSKVESLQRASLRDPVRVS 261
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y+ L + ++ K K YL+ L+ + I+FT +V T R+ LL
Sbjct: 262 VSSSKYQTVSTLLQHYILVPHKRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTL 321
Query: 356 G 356
G
Sbjct: 322 G 322
>gi|170095563|ref|XP_001879002.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646306|gb|EDR10552.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 654
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 75/315 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDLALQVKDVFAAIAP 126
+D+ + TGSGKTL++ +P+++ L R A L AL++ PTR+LA+Q+ DV +I
Sbjct: 39 KDVLGAAQTGSGKTLAFLVPVLEILYRRKWGAADGLGALIISPTRELAVQIFDVLRSIGG 98
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
S GL +G ++ DE L S ++ILVATPGRL+ H
Sbjct: 99 YHSFSAGLVIGGKNLKDERDRL----------------------SRMNILVATPGRLLQH 136
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
++ T GF ++L LV+DE DR+L +Q L +L + LP + +
Sbjct: 137 MDQTVGFDADNLQVLVLDEADRILDMGFQKTLAALL---------------SHLPKSRQT 181
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKL 303
L + SAT TQ + LA+L L P+++ + +
Sbjct: 182 L-----------------------LFSATQTQSVSDLARLSLKDPVYVGINVASSSTSTM 218
Query: 304 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST----HRLCTLLNHFGELR 359
P+ LE + +ICE K L + +++ + K IVF SS + C + H G
Sbjct: 219 PQNLEQHYVICELDKKLDVLWSFIKTHLQSKIIVFMSSCKQVRFVFETFCKM--HPG--- 273
Query: 360 IKIKEYSGLQRQSVR 374
+ + G Q+QS R
Sbjct: 274 VPLLHLHGKQKQSAR 288
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 66/325 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ M + +Q E + L RD+ + TGSGKT ++ALPI+
Sbjct: 28 LGLIDPLLE-ALEQMKYKAPTDIQA----EALPHALQGRDIIGVASTGSGKTAAFALPIL 82
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + L A V+ PTR+LA Q+ F +I A+G+ +G I + L K+
Sbjct: 83 QKLWEDP-KGLFACVIAPTRELAFQITQQFESIGSAMGVRCATIIGGVDIQSQKIALAKK 141
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P ++VATPGRL++H+ T+GF+L L +LV+DE DRLL
Sbjct: 142 PH---------------------VIVATPGRLLEHLEETKGFSLRSLKFLVLDEADRLLD 180
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ L +L+L + +T+L
Sbjct: 181 MDFGPILDKILKLIPKER-------TTYL------------------------------- 202
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
SAT+T KL + L +P+ + ++Y L Y L+ K ++L+ L +L
Sbjct: 203 FSATMTTKVAKLQRASLSNPVRVEV-NSKYSTVSTLLQYYLLMPLPQKDVHLIYLANTLA 261
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
+ I+FT +V RL +L G
Sbjct: 262 QNSMIIFTRTVHDAQRLSIMLRSLG 286
>gi|259147982|emb|CAY81231.1| Drs1p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 298 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 356
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 357 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 396
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 397 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 418
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 419 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 472
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 473 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 505
>gi|349579719|dbj|GAA24880.1| K7_Drs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 756
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 245 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 299
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 300 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 358
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 359 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 398
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 399 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 420
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 421 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 474
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 475 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 507
>gi|66356406|ref|XP_625381.1| Dbp6p, eIF4a-1 family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|46226394|gb|EAK87399.1| Dbp6p, eIF4a-1 family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
Length = 528
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 74/331 (22%)
Query: 19 VDVSLFEDCPLDH------LPCLDPRLKVALQNM-GISSLFPVQVAVWQETIG------P 65
+ +S ++ +D L + +K L+ + G + FP+Q V +
Sbjct: 4 IQISQLDNTEIDQKNDESLLKRFNKNIKKGLKEIEGFTGFFPIQQKVIPYILDGINCDVN 63
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIA 125
+ D+CI+ PTG GKTL Y +PI L NR L LV++PTR+LA QVK+VF
Sbjct: 64 NYYSSDVCISVPTGEGKTLCYVIPIANYLYNRTYPNLSVLVLVPTRELANQVKNVFTIFT 123
Query: 126 PA----VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
+ + GQ S ++E+ +L +Q D++++TPG
Sbjct: 124 KVNKGRFPIKITTLTGQQSFSNEMHQL---------------STIQP-----DVVISTPG 163
Query: 182 RLMDHINATRGFT--------LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 233
RL +H N ++ +++VDE DRLL + Y WL V
Sbjct: 164 RLCEHYNQLVISQDQQEIPELFRNIHFIIVDEVDRLLSQPYNDWLSIV------------ 211
Query: 234 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
++ S ++ S + E G K P ++++LSAT++ P KL QLDL P++
Sbjct: 212 NNISKYILS--------KEDNGELGLAKKT-P--IRILLSATISNSPYKLNQLDLVRPIY 260
Query: 294 L---TTGETRYKLPERL-ESYKLICESKLKP 320
TGE+ +P R+ + + + K KP
Sbjct: 261 FISSVTGESN--IPSRMSQKFVKVTNKKYKP 289
>gi|160380652|sp|A7A0P8.1|DRS1_YEAS7 RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|151941161|gb|EDN59539.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406035|gb|EDV09302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207343227|gb|EDZ70754.1| YLL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 754
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 298 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 356
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 357 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 396
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 397 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 418
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 419 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 472
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 473 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 505
>gi|6323021|ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae S288c]
gi|1706521|sp|P32892.2|DRS1_YEAST RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|1360171|emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
gi|1495215|emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
gi|285813414|tpg|DAA09310.1| TPA: Drs1p [Saccharomyces cerevisiae S288c]
Length = 752
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 241 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 295
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 296 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 354
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 355 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 394
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 395 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 416
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 417 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 470
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 471 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 503
>gi|323303947|gb|EGA57727.1| Drs1p [Saccharomyces cerevisiae FostersB]
Length = 755
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 244 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 298
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 299 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 357
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 358 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 397
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 398 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 419
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 420 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 473
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 474 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 506
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q+L ++ +
Sbjct: 70 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKP-QP 124
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 125 LFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALGKKPH-------- 176
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 177 -------------IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKI 223
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 224 LKV---------------LPRE-------RRT----------------YLFSATISSKVE 245
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ +Y+ L + K YL+ LL + I+FT +
Sbjct: 246 SLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRT 305
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 306 VNETQRIAILLRTLG 320
>gi|392297967|gb|EIW09066.1| Drs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 748
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 237 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 291
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 292 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 350
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 351 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 390
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 391 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 412
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 413 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 466
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 467 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 499
>gi|256272311|gb|EEU07295.1| Drs1p [Saccharomyces cerevisiae JAY291]
Length = 751
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 83/333 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 240 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 294
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 295 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 353
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 354 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 393
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 394 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 415
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 416 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 469
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFG 356
++ L G+++ +VF + E+ HRL ++ G
Sbjct: 470 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG 502
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 90 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 148
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 149 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 187
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 188 ATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 234
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 235 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 269
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ ++L+ Y + K K +YLV +L L ++F S+ +T + +L G
Sbjct: 270 -NKYQTVDQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 327
>gi|145230033|ref|XP_001389325.1| ATP-dependent RNA helicase has1 [Aspergillus niger CBS 513.88]
gi|143019625|sp|A2Q9T6.1|HAS1_ASPNC RecName: Full=ATP-dependent RNA helicase has1
gi|134055440|emb|CAK43955.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
+Q+MG ++ +Q Q TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 139 GIQDMGFETMTEIQ----QRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 194
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 195 RNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 246
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 247 -------------GVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEM 293
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 294 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 316
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 317 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 376
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 377 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 411
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 143/329 (43%), Gaps = 67/329 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L A + +G P+Q + I L RD+ + TGSGKT ++ALPI+
Sbjct: 62 LGIVDP-LCEACEALGYKQPTPIQT----QAIPLALQGRDVIGIAETGSGKTAAFALPIL 116
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q+L ++ + L LV+ PTR+LA Q+ F A+ + L + VG + + L K+
Sbjct: 117 QSLLDKP-QPLFGLVLAPTRELAAQIGQAFEALGSLISLRCAVVVGGLDMVSQSIALGKK 175
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P ++VATPGRL+DH+ T+GF+L L YLV+DE DRLL
Sbjct: 176 PH---------------------VVVATPGRLLDHLEKTKGFSLRSLKYLVMDEADRLLD 214
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ L +L+ FLP RR +
Sbjct: 215 LDFGPILDKILK---------------FLPRE-------RRT----------------YL 236
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
SAT++ L + L PL ++ R K L LI K +YL+ L+
Sbjct: 237 FSATMSSKVESLQRASLRDPLRVSVSSKREKTVATLLQNPLIIPHMHKDVYLIYLVNEFA 296
Query: 332 EEKCIVFTSSVESTHRLCTLLN--HFGEL 358
+ I+FT +V RL LL FG +
Sbjct: 297 GQTTIIFTRTVNEAQRLSILLRTLSFGAI 325
>gi|350638396|gb|EHA26752.1| hypothetical protein ASPNIDRAFT_51832 [Aspergillus niger ATCC 1015]
Length = 606
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
+Q+MG ++ +Q Q TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 139 GIQDMGFETMTEIQ----QRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 194
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 195 RNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 246
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 247 -------------GVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEM 293
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 294 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 316
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 317 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 376
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 377 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 411
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 61/300 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q +I L +DL + TGSGKT ++ALPI+Q L + L A ++ PTR+LA Q+
Sbjct: 128 IQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHSTLFACILAPTRELAFQI 187
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ AI ++G+ + VG + + L KRP I+V
Sbjct: 188 SEQTEAIGGSLGVKTCVIVGGMDMMPQAIALSKRPH---------------------IIV 226
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L + YLV+DE DRLL + + +L++
Sbjct: 227 ATPGRLLDHLENTKGFSLRSIKYLVMDEADRLLDLDFGPIIEKILKV------------- 273
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP P+ + SAT+T +L ++ L +P+ +
Sbjct: 274 --LP-----------------------PQRNTYLFSATMTDKVERLQRMSLTNPVRVAV- 307
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ + L Y ++ K K YLV L+ + + I+FT ++ T R+ LL G
Sbjct: 308 SSKYQTVKSLLQYFMLIPQKDKDTYLVYLVAEKFAGKTMIIFTRTIMDTQRISVLLRLLG 367
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ P+Q ++I P L +D+ + TGSGKT ++A+PI+ +L +
Sbjct: 76 PELIQACKNLNYEKPTPIQ----SKSIPPALNGKDIIGLAQTGSGKTAAFAIPILNSLWH 131
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 132 DQL-PYYACILSPTRELAQQIKETFDSLGSLMGVRTVCIVGGMNMMDQARDLMRKPH--- 187
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ TRGF+L L YLV+DE DRLL +
Sbjct: 188 ------------------IIIATPGRLMDHLENTRGFSLRKLRYLVMDEADRLLDMEFGP 229
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ ++ +T+L SAT+
Sbjct: 230 VLDRILKILPTEGR------TTYL-------------------------------FSATM 252
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 253 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFHGKTFI 311
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + R+ L N
Sbjct: 312 IFTRTKANAERIAGLAN 328
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 63/310 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ V + + L D+ + TGSGKT ++ALPI+Q L + L A V+ PTR+
Sbjct: 42 PTQIQV--DAVPVALKGHDIIGLAQTGSGKTATFALPILQALLENP-QPLFACVLSPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA+Q+ + F A+ +GL + VG + + L KRP
Sbjct: 99 LAIQIAEQFEALGSGIGLKCAVLVGGIDMMAQSVALAKRP-------------------- 138
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
++V TPGRL+DH+ T+GF+L + YLV+DE DRLL ++ + +L++ +
Sbjct: 139 -HVVVGTPGRLVDHLTNTKGFSLRTIKYLVLDEADRLLNMDFEQEIDEILKVIPKERR-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
T+L SAT+T KL + L +P+
Sbjct: 196 -----TYL-------------------------------FSATMTTKVAKLQRACLKNPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ +Y + L+ L +K K YLV +L L +VFT + E+T +L +L
Sbjct: 220 KVEV-SAKYSTVDSLKQEYLFIPAKYKDCYLVYILNELAGNTAMVFTRTCEATRKLSLVL 278
Query: 353 NHFGELRIKI 362
+ G + I I
Sbjct: 279 RNLGFVAIPI 288
>gi|308806291|ref|XP_003080457.1| DEAD (ISS) [Ostreococcus tauri]
gi|116058917|emb|CAL54624.1| DEAD (ISS) [Ostreococcus tauri]
Length = 419
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 55/355 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LD RL+ AL + ++ LFPVQ +V G FERDLC+++PTGSGKTL+Y LP++ L
Sbjct: 5 LDSRLEKALDELQLTQLFPVQRSVLSRAYA-GRFERDLCVSAPTGSGKTLAYMLPLIHIL 63
Query: 95 SNR-AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR-- 151
S R + L+VLP+ DLA QV V VG+ V + + ++ + S + R
Sbjct: 64 SKRTSTEKTLGLIVLPSSDLATQVCSVAGHFCAKVGVCVRVTGVRGTLPNCDSLRVSRRA 123
Query: 152 PK------LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
PK ++A + + + S ILV TPG L+ H A +E + +LV+DE
Sbjct: 124 PKRRFIRRMQATASHSKSQ--RSVPSTPQILVTTPGGLVAHRAA-----IETIEFLVIDE 176
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
D++L++++Q +L T+ S + R S F+ ++
Sbjct: 177 ADKILQQSHQNFLATL----NSGLQRRREVDSVFV-------------------GERHSN 213
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YK-----LPERLESYKLICESKLK 319
RL ++ SATL + DLH + R YK LP + + + E+ K
Sbjct: 214 RLQILLCSATLKKT-------DLHMIRIFAPDQVRIYKSQVADLPSCISEFVVFSEAGDK 266
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+++L++ K ++ +S L L+ G EYS + Q R
Sbjct: 267 FAALLSILKACSSSKMVILCASATRARHLYDQLHQIGSF--TCFEYSSMASQQHR 319
>gi|358365362|dbj|GAA81984.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 606
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
+Q+MG ++ +Q Q TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 139 GIQDMGFETMTEIQ----QRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 194
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 195 RNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 246
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 247 -------------GVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEM 293
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 294 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 316
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 317 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 376
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 377 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 411
>gi|331217930|ref|XP_003321643.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300633|gb|EFP77224.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 646
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 70/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A+Q+MG + + VQ TI P + RD+ + TGSGKTL++ +P V+ L
Sbjct: 115 LSPPTAKAIQDMGFTKMTEVQA----RTIPPLMTGRDVLGAARTGSGKTLAFLIPAVEML 170
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S + ++V PTR+LALQ+ V + + + +G ++ E +L+K
Sbjct: 171 SRLQFKPRNGTGTIIVSPTRELALQIFGVAQELMKHHSQTFAIVIGGANRKAEAEKLVK- 229
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++L++TPGRL+DH+ T+GF +L LVVDE DR+L
Sbjct: 230 --------------------GVNLLISTPGRLLDHLQNTKGFVFSNLKALVVDEADRILE 269
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + ++ L S ENR S M+
Sbjct: 270 IGFEDEMRQIISLLPS--ENRQS-----------------------------------ML 292
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + + + LE ++C+S + L L L+
Sbjct: 293 FSATQTTKVQDLARISLRPGPLYINVDADKQEATVQGLEQGYVVCDSDKRFLLLFTFLKK 352
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + I + + G Q+Q R
Sbjct: 353 SLKKKVIVFFSSCNSVKYHAELLNY---IDIPVLDLHGKQKQQKR 394
>gi|444318547|ref|XP_004179931.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
gi|387512972|emb|CCH60412.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 148/334 (44%), Gaps = 83/334 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G S P+Q A I L +D+ + TGSGKT ++ +PI++ L
Sbjct: 246 PVLK-GLAALGYSKPSPIQSAA----IPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 300
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+QV DV + V G++ GLAVG ++ + +L RP
Sbjct: 301 KPAKVTSTRVIVLTPTRELAIQVSDVGKKVGKFVNGVTFGLAVGGLNLRQQEQQLKSRP- 359
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI+VATPGR +DHI + F ++ + LV+DE DR+L +
Sbjct: 360 --------------------DIVVATPGRFIDHIRNSASFNVDSVEILVIDEADRMLEDG 399
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L LPS +L + S
Sbjct: 400 FQDELNEIMSL---------------LPSKRQTL-----------------------LFS 421
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ +L L L P+ + P + + KL+ E LKP L L
Sbjct: 422 ATMNSKIKQLISLSLKKPVRIMID------PPKQAAAKLVQEFVRIRKRDNLKPALLYTL 475
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFGE 357
++ L G+++ +VF + E+ H+L +L G+
Sbjct: 476 IRKLDGAGQKRIVVFVARKETAHKLRIILGLLGQ 509
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 140/339 (41%), Gaps = 68/339 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-S 95
P L A MG +Q E I L RDL TGSGKT ++ALPI+Q L
Sbjct: 50 PELVAACDAMGWKEPTRIQA----EAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLK 105
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
+ L A V+ PTR+LA Q+ F A+ A+GLS + VG + L KRP
Sbjct: 106 QDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPH-- 163
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
I+V TPGRL+DH+ T+GF+L L YLV+DE D+LL +Q
Sbjct: 164 -------------------IVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQ 204
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
L +L + + TFL SAT
Sbjct: 205 KALDDILNVIPKERR-------TFL-------------------------------FSAT 226
Query: 276 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+T +KL + L +P+ + ++Y + L + K +LV +L L
Sbjct: 227 MTNKVSKLQRACLRNPVKVEVA-SKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMI 285
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++F + EST L L + LR K SG Q R
Sbjct: 286 MIFVRTCESTRLLALTLRN---LRFKAISISGQMSQDKR 321
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +++G + P+Q E I L RDL + TGSGKT ++ LPI+Q L ++ +
Sbjct: 65 ACESLGYKAPTPIQA----EAIPLALQGRDLIGLAETGSGKTAAFVLPILQALMDKP-QQ 119
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L +L++ PTR+LA Q+ + A+ + + + VG + + L K+P
Sbjct: 120 LHSLILAPTRELAYQISEAVEALGSLIAVRCAVLVGGMDMITQAIALGKKPH-------- 171
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 172 -------------VIVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKI 218
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + + SAT++
Sbjct: 219 LKILPREGRKTY-------------------------------------LFSATMSSKVE 241
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +PL + + +Y+ L L K K LYL+ +L I+FT +
Sbjct: 242 SLQRASLSNPLRVAVSQDKYQTVSTLIQSYLFIPHKHKDLYLIHILNEHAGHTGIIFTRT 301
Query: 342 VESTHRLCTLLNHFG 356
V R+ LL G
Sbjct: 302 VNEAQRVSILLRTLG 316
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 71/309 (22%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+++ + E I P L +DL + TGSGKT ++ALPI+ L N C V+
Sbjct: 749 PLEIQI--EAIPPALEGKDLIGLAKTGSGKTGAFALPILHALLEAPRPNHFFAC----VM 802
Query: 108 LPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 167
PTR+LA+Q+ + F A+ +G+ + VG + + ++ K P
Sbjct: 803 SPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLPH-------------- 848
Query: 168 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 227
I+V TPGR++DH+ T+GF+L L YLV+DE DRLL E ++ L +L
Sbjct: 849 -------IIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL----- 896
Query: 228 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 287
G + RR + SAT+T KL ++
Sbjct: 897 -----------------GMIPRERRT----------------FLFSATMTNKVEKLQRVC 923
Query: 288 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
L +P+ + T ++Y + L+ +K K YLV +L + +VFT + +ST
Sbjct: 924 LRNPVKIETS-SKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRL 982
Query: 348 LCTLLNHFG 356
L +L + G
Sbjct: 983 LALILRNLG 991
>gi|344299490|gb|EGW29843.1| hypothetical protein SPAPADRAFT_157925 [Spathaspora passalidarum
NRRL Y-27907]
Length = 553
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 85/351 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G P+Q A +I L +D+ + TGSGKT +Y +PI++ L
Sbjct: 50 PVLK-GLAQLGYVKPSPIQSA----SIPIALLGKDIVAGAQTGSGKTAAYMIPIIERLLY 104
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPK 153
+ V R +V+ PTR+LA+QV DV ++ + L+ GLAVG ++ + +L RP
Sbjct: 105 KPSKVPSTRVIVLTPTRELAIQVCDVGKKLSQFINNLNFGLAVGGLNLRQQELQLKSRP- 163
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGRL+DHI + F++++L LV+DE DR+L E
Sbjct: 164 --------------------DIVIATPGRLIDHIRNSPSFSIDNLEVLVIDEADRMLDEG 203
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+QA L +L L P + ++ S
Sbjct: 204 FQAELTEILSLI-------------------------------------PKYKRQTLLFS 226
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L QL L P+ + P + + KLI E LKP L L
Sbjct: 227 ATMNTKIQDLIQLSLQKPVRIMID------PPKTAASKLIQEFIRIRKRDHLKPALLFQL 280
Query: 327 LQSLG---EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+++ + + +VF S E H+L ++ G L +K+ E G Q R
Sbjct: 281 LKTIDPKQQNRIVVFVSRKEMAHKLRIII---GLLGMKVSELHGSLTQEQR 328
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 142/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 75 PELIEACENLKFTKPTPIQ----SKAIPPALQGNDIIGLAQTGSGKTAAFAIPILNQLWH 130
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ +G ++ D+ +L+++P
Sbjct: 131 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIMGGMNMMDQARDLMRKPH--- 186
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + A
Sbjct: 187 ------------------IIIATPGRLMDHLENTKGFSLRKLRFLVIDEADRLLDMEFGA 228
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L K+ P + SAT+
Sbjct: 229 VLDRIL-------------------------------------KNIPTKGRTTYLFSATM 251
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ + +Y+ + L ++ LK YL+ LL + I
Sbjct: 252 TSKIDKLQRASLTNPVKCSVS-NKYQTVDTLIQTLMVVPGGLKNTYLIYLLNEFIGKSTI 310
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + R+ L N
Sbjct: 311 VFTRTKANAERISGLCN 327
>gi|156370098|ref|XP_001628309.1| predicted protein [Nematostella vectensis]
gi|156215282|gb|EDO36246.1| predicted protein [Nematostella vectensis]
Length = 585
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 150/325 (46%), Gaps = 81/325 (24%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 103
N+G+S L VQ A I L D+CI S TGSGKTL YA+P+VQTL + + R
Sbjct: 124 NNVGVSKLTSVQKAA----IPTLLAGEDVCIKSKTGSGKTLCYAIPVVQTLQDIVPKIER 179
Query: 104 A-----LVVLPTRDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 157
A +V++PTR+LALQ ++ + P + GL VG KR +A
Sbjct: 180 ADGPYAVVLVPTRELALQSFNLLLKLVKPFQWVVPGLVVGGE----------KRKSEKA- 228
Query: 158 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 217
L+ ++ILVATPGRL+DHI T+ T ++ ++V+DE DRLL ++
Sbjct: 229 ----------RLRKGINILVATPGRLLDHIEKTQCLTFRNVQWIVLDEADRLLDMGFEKD 278
Query: 218 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 277
+ +L+ + +K + R V +LSATLT
Sbjct: 279 VSAILKAIKDQQ-----------------IKAMHRQAV---------------LLSATLT 306
Query: 278 QDPNKLAQLDLHHPLFLTTGETRY--------------KLPERLESYKLICESKLKPLYL 323
Q +L + L +P F++ ++P +L+ Y +I SK++ + L
Sbjct: 307 QGVKQLVSIALSNPQFVSESGLNQQVEKDGSLDESVLAQIPSQLKQYFVIVPSKMRLVSL 366
Query: 324 VALLQSLGEE----KCIVFTSSVES 344
+ + S +E K IVF SS +S
Sbjct: 367 ASFILSKVQESPQNKMIVFLSSRDS 391
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E + L RD+ + TGSGKT ++ALPI+Q L R L A V+ PTR+LA Q+
Sbjct: 40 IQREALPHALEGRDIIGVASTGSGKTAAFALPILQKLWEEP-RGLFACVLAPTRELAYQI 98
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ A+G+ + VG + D+ L K+P I+V
Sbjct: 99 SQQFEALGSAMGVRCAVLVGGMDLIDQAVALAKKPH---------------------IIV 137
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL H+ T+GF+L L +LV+DE DRLL + + +L++ + +
Sbjct: 138 ATPGRLQQHLTETKGFSLRGLKFLVLDEADRLLDLDFGPVIDQILKIIPKER-------T 190
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL + L +P+ +
Sbjct: 191 TYL-------------------------------FSATMTTKVAKLQRASLSNPIRVEV- 218
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ L Y L K ++L+ L SL I+FT +V RL +L G
Sbjct: 219 SSKYQTVSTLLQYYLFIPLSQKDVHLIYLANSLASNSIIIFTRTVHDAQRLSIMLRILG 277
>gi|384495140|gb|EIE85631.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 502
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 74/355 (20%)
Query: 26 DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTL 84
+ + L C D +K A++ MG + + VQ +TI P L E +D+ + TGSGKTL
Sbjct: 52 NLEFESLDCNDD-IKKAIKEMGFTQMTEVQA----KTI-PALLEGKDVLGAAKTGSGKTL 105
Query: 85 SYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
++ +P ++ L + + +VV PTR+LA+Q+ V + V +S G+ +G ++
Sbjct: 106 AFLIPAIELLVRQKFKSRHGTGIVVVSPTRELAIQIYGVVEELCKYVQISHGIVIGGANR 165
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
E +L+K V++LVATPGRL+DH+ T+GF L L
Sbjct: 166 KAESDKLMK---------------------GVNLLVATPGRLLDHLQNTQGFIFNRLQAL 204
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DR+L ++ + +L++ LP+ S
Sbjct: 205 VIDEADRILEIGFEEEMKQILKI---------------LPTERQS--------------- 234
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLK 319
M+ SAT T + LA+L L P+++ E + + LE + + +
Sbjct: 235 --------MLFSATQTNKVSDLAKLSLKGDPVYINVDEQKDTSTADGLEQGFVTVDGDKR 286
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ ++K IVF SS + LLN+ + + + E G Q+Q R
Sbjct: 287 FLLLFTFLRKNQKKKVIVFFSSCNAVKYYSELLNY---IDVPVMELHGRQKQQKR 338
>gi|307210507|gb|EFN87010.1| Probable ATP-dependent RNA helicase DDX31 [Harpegnathos saltator]
Length = 874
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 155/350 (44%), Gaps = 84/350 (24%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINS 76
PVD +F + + L + QNM I+ + VQ Q+ I P +F +D+ + S
Sbjct: 286 PVDEPIFTEITFEDLNIHSHMISNLAQNMNITKMTTVQ----QKAI-PQIFSAKDILVRS 340
Query: 77 PTGSGKTLSYALPIVQTLS------NRAVRCLRALVVLPTRDLALQVKDVFAA-IAPAVG 129
TGSGKTL+YA+PIV+ L NR L AL+V+PTR+L LQ + F + P
Sbjct: 341 QTGSGKTLAYAIPIVELLHKIRPKLNRNSGLL-ALIVVPTRELTLQTYECFIKLVKPFTW 399
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+ G +G KR +A L+ ++L+ATPGRL+DH+
Sbjct: 400 IVPGYLIGGE----------KRKAEKA-----------RLRKGCNVLIATPGRLLDHMQN 438
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+ L + Y V+DE DR+L Y+ + TR +NR
Sbjct: 439 TKALKLHEVKYFVLDEADRMLDMGYEKDISG----TRDIEQNR----------------- 477
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL------ 303
+DK R ++LSATLTQ KLA L + P+F+ + ++
Sbjct: 478 ----------EDKDQSRRQTILLSATLTQAVEKLAGLAMRSPIFVDAAKANLEMSAGDVS 527
Query: 304 --------PERLESYKLICESKLKPLYLVALL----QSLGEEKCIVFTSS 341
P+ + ++ KL+ + L A + Q+ G+ K ++F ++
Sbjct: 528 EINEDLVVPQSVSQNYIVTPPKLRMVTLSAYIAGKCQTPGQHKILIFMAT 577
>gi|150863803|ref|XP_001382401.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
gi|158514819|sp|A3LNR6.2|HAS1_PICST RecName: Full=ATP-dependent RNA helicase HAS1
gi|149385059|gb|ABN64372.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
Length = 567
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 76/356 (21%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
FED L +P ++ A+ +MG ++ VQ +TI P L +D+ + TGSGKT
Sbjct: 105 FEDAGLS-----EPTMR-AISDMGFKTMTKVQA----KTIPPLLAGKDVLGAAKTGSGKT 154
Query: 84 LSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
L++ +P ++ +L + +VV PTR+LALQ+ V + + G+ +G ++
Sbjct: 155 LAFLIPAIELLYSLKFKPRNGTGVIVVSPTRELALQIFGVARELMAHHTQTFGIVIGGAN 214
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L K V++L+ATPGRL+DH+ T+GF ++L
Sbjct: 215 RRQEAEKLAK---------------------GVNLLIATPGRLLDHLQNTQGFVFKNLKA 253
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + ++++
Sbjct: 254 LVIDEADRILEIGFEEEMKQIIKIL----------------------------------- 278
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKL 318
P M+ SAT T LA++ L PL++ ET + LE ++C+S
Sbjct: 279 --PKEERQSMLFSATQTTKVEDLARISLRPGPLYINVVPETAASTADGLEQGYVVCDSDK 336
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 337 RFLLLFSFLKKYSKKKIIVFLSSCNSVKYFGELLNY---IDLPVLDLHGKQKQQKR 389
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A QN+ + P+Q I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 82 PELIQACQNLNFTKPTPIQA----RAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKLWE 137
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A V+ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 138 DQ-QPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH--- 193
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L++L +LV+DE DRLL +
Sbjct: 194 ------------------IIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGP 235
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 236 VLDRILKIIPTKGR------TTYL-------------------------------FSATM 258
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 259 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTVI 317
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 318 IFTRTKANAERLSGLCN 334
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 133/300 (44%), Gaps = 60/300 (20%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
++ ++I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA Q
Sbjct: 81 SIQAKSIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAAQ 139
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ F A+ + L + VG + + L K+P I+
Sbjct: 140 IGQSFEALGALISLRCAVIVGGLDMVPQAIALGKKPH---------------------II 178
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 179 VATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK------------- 225
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
F+P RR + SATL+ L + L P+ ++
Sbjct: 226 --FIPRE-------RRT----------------YLFSATLSSKVESLQRASLRDPVRVSV 260
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ L + + K K YL+ L+ + I+FT +V T R+ LL G
Sbjct: 261 SSSKYQTVSTLLQHYIFVPHKRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLG 320
>gi|409078086|gb|EKM78450.1| hypothetical protein AGABI1DRAFT_121530 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 832
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 97/389 (24%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
+EE +K +M +P P D+ LF D P+ G+ F V++ Q
Sbjct: 41 VEEVEKLAMEYVP----PADLKLFADLPISENT-----------KRGLKKGFFVEMTDIQ 85
Query: 61 -ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDLALQ 116
++I L +D+ + TGSGKTL++ +P+++ L R AV L AL++ PTR+LA+Q
Sbjct: 86 AKSIPVSLKGKDVLGAARTGSGKTLAFLIPVLEALYRRKWGAVDGLGALIISPTRELAVQ 145
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ +V +I S GL +G ++ DE L S ++IL
Sbjct: 146 IFEVLRSIGGYHTFSAGLVIGGKNLKDEKDRL----------------------SRMNIL 183
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+ H++ T GF ++L LV+DE DR+L +Q L +L
Sbjct: 184 VATPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALL-------------- 229
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-- 294
+ LP + +L + SAT TQ N LA+L L P+ +
Sbjct: 230 -SHLPKSRQTL-----------------------LFSATQTQSVNDLARLSLKEPVSIGI 265
Query: 295 -----TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST---- 345
TG+T +P LE + ++ + K L + +++ + K +VF S+ +
Sbjct: 266 SSPGEATGDTY--IPATLEQHYVVSDLDKKLDILWSFIKTHLQCKTLVFMSACKQVRFVY 323
Query: 346 HRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
C + H G I + G Q+QS R
Sbjct: 324 ETFCRM--HPG---IPLIHLHGKQKQSAR 347
>gi|448124024|ref|XP_004204815.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358249448|emb|CCE72514.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 79/355 (22%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D + +P LK A++++G S + VQ TI P L RD+ + TGSGKTL++ +
Sbjct: 116 FDEIGLSEPTLK-AIKDLGFSKMTEVQ----SRTIPPLLAGRDVLGAAKTGSGKTLAFLI 170
Query: 89 PIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ +L + +++ PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 171 PAIELLYSLKFKPRNGTGVIIISPTRELALQIFGVARELMAHHTQTFGIVIGGANRRQEA 230
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L+K V++L+ATPGRL+DH+ T+GF +L LV+DE
Sbjct: 231 EKLMK---------------------GVNLLIATPGRLLDHLQNTKGFVFRNLKALVIDE 269
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ NE+R S
Sbjct: 270 ADRILEIGFEEEMRQIIKIL--PNEDRQS------------------------------- 296
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PL++ E + LE ++C+S + L L
Sbjct: 297 ----MLFSATQTTKVEDLARMSLRPGPLYINVASEAAASTADGLEQGYVVCDSDKRFLLL 352
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
+ L+ ++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 353 FSFLKRNIKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 400
>gi|50551911|ref|XP_503430.1| YALI0E01782p [Yarrowia lipolytica]
gi|74634065|sp|Q6C7D2.1|HAS1_YARLI RecName: Full=ATP-dependent RNA helicase HAS1
gi|49649299|emb|CAG79009.1| YALI0E01782p [Yarrowia lipolytica CLIB122]
Length = 605
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 160/355 (45%), Gaps = 72/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E P +P + ++ +L++MG ++ PVQ ++TI P L RD+ + TGSGKTL
Sbjct: 129 ERKPFSTIPLSENTMQ-SLKDMGFETMTPVQ----EKTIPPLLAGRDVLGAAKTGSGKTL 183
Query: 85 SYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
++ +P ++ L + +VV PTR+LALQ+ V + ++G+ +G ++
Sbjct: 184 AFLIPAIEMLRKLKFKPRNGTGVIVVSPTRELALQIYGVARDLMANHSQTLGIVIGGNNR 243
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
E ++L V++LV TPGRL+DH+ ++GF ++L L
Sbjct: 244 RQE---------------------EEKLNKGVNLLVCTPGRLLDHLQNSQGFVFKNLKAL 282
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
++DE DR+L ++ + ++++ LP S
Sbjct: 283 IIDEADRILEIGFEQEMKEIIKI---------------LPKERQS--------------- 312
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETRY-KLPERLESYKLICESKLK 319
M+ SAT T LA++ L PL+L E E LE ++C+S +
Sbjct: 313 --------MLFSATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKR 364
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L + L+ +K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 365 FLLLFSFLKRNAGKKIIVFLSSCNSVKFYGELLNY---IDLPVLDLHGKQKQQKR 416
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 137/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 74 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALLDKP-QP 128
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L LV+ PTR+LA Q+ F A+ + + + VG + + L K+P
Sbjct: 129 LFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSIALGKKPH-------- 180
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 181 -------------IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKI 227
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ LP RR + SAT++
Sbjct: 228 LKV---------------LPRE-------RRT----------------YLFSATISSKVE 249
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ +Y+ L + K YL+ LL + I+FT +
Sbjct: 250 SLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRT 309
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 310 VNETQRIAILLRTLG 324
>gi|198424759|ref|XP_002127650.1| PREDICTED: similar to Ddx10 protein [Ciona intestinalis]
Length = 736
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 74/325 (22%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V FE+ P + K L+ G SL +Q A I P + +D+ + TGS
Sbjct: 47 VEKFEEFPFA------TKTKAGLRKAGFVSLTAIQRAA----IKPAMLGKDILGAAKTGS 96
Query: 81 GKTLSYALPIVQTLSNRAVRCLR---ALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
GKTL++ +PI++ L L ALV+ PTR+LA Q+ +V + S GL +G
Sbjct: 97 GKTLAFIIPILECLHKHNWNSLDGPGALVISPTRELAFQIFEVLKKVGGKHNFSAGLLIG 156
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 197
+++ +E + K +I++ TPGRL+ H++ T F + +
Sbjct: 157 GNNVKEEAHSVGK----------------------TNIIICTPGRLLQHMDTTSYFHMNN 194
Query: 198 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
L L++DE DR+L ++ L ++ EN LPS +L
Sbjct: 195 LKMLILDEADRILDMGFKTTLDAII-------EN--------LPSERQTL---------- 229
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-GETRYKLPERLESYKLICES 316
+ SAT T+ LA+L L P +++ E ++ P+ L + CE
Sbjct: 230 -------------LFSATQTKSVKDLARLSLRDPAYISVHSEAKHSTPQGLTQRFICCEL 276
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSS 341
K K L + +++ + KC+VF SS
Sbjct: 277 KDKLNVLFSFIRNHQKSKCLVFVSS 301
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 62/303 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR+LA Q+
Sbjct: 136 IQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTRELAAQI 194
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ ++ L + VG + + + L K+P I+V
Sbjct: 195 GQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPH---------------------IVV 233
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+
Sbjct: 234 ATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK-------------- 279
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
FLP RR + SAT++ L + L PL ++
Sbjct: 280 -FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVS 315
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HF 355
++ K L L K K +YL+ L + IVFT +V R+ LL F
Sbjct: 316 SSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSF 375
Query: 356 GEL 358
G +
Sbjct: 376 GAI 378
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 89 PELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRLWH 144
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 145 DQ-EPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 200
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 201 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 242
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 243 VLDRILKII-------------------------------------PTQERTTYLFSATM 265
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YLV LL + I
Sbjct: 266 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVVPGGLKNTYLVYLLNEFIGKTMI 324
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 325 IFTRTKANAERLSGLCN 341
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 76 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLA 135
S TG+GKTL+Y+LPI+ +L N R A+++LPTR+L+ QV V + I +GL L
Sbjct: 50 SNTGTGKTLAYSLPILHSLLNDD-RYFYAMIILPTRELSQQVHAVLSDIGAEIGLRTTLL 108
Query: 136 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 195
+G + + L RP I++ TPGR+ H+ T+G TL
Sbjct: 109 IGAVDLLVQGKSLAARPH---------------------IIIGTPGRIYHHLRNTKGITL 147
Query: 196 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 255
YLV+DE DRLL + + +L+L
Sbjct: 148 SSFKYLVLDECDRLLDNDFDGDINGILELIS----------------------------- 178
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 315
P+ + + SATLT+ N +++PL + +PE + +
Sbjct: 179 ---------PKYI-FLFSATLTKRVNAFKNKRMNNPLLYNVQKDE-GIPENISQQYVYLP 227
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
K K +YL ++++SLG KCIVF + + ++ +L E
Sbjct: 228 QKYKEVYLYSIIRSLGSRKCIVFVKTCITAEKIERMLRSLDE 269
>gi|255711788|ref|XP_002552177.1| KLTH0B08998p [Lachancea thermotolerans]
gi|238933555|emb|CAR21739.1| KLTH0B08998p [Lachancea thermotolerans CBS 6340]
Length = 492
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 70/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A+ MG +++ VQ TI P L RD+ + TGSGKTL++ LP ++ L
Sbjct: 35 LSPPTMKAIDKMGFTTMTQVQ----SRTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEML 90
Query: 95 SNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
+ + +V+ PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 91 HSLKFKPRNGTGVIVITPTRELALQIFGVAKTLMEFHSQTFGIVIGGANRRQEADKLAK- 149
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++L+ATPGRL+DH+ T+ F ++L LV+DE DR+L
Sbjct: 150 --------------------GVNLLIATPGRLLDHLQNTKDFVFKNLKALVIDEADRILE 189
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + ++++ LPS ER M+
Sbjct: 190 IGFEDEMRQIVKI---------------LPSE------------ERQ----------TML 212
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PLF+ E + + LE ++C+S + L L + L+
Sbjct: 213 FSATQTTKVEDLARISLRPGPLFINVDSEKQTSTADGLEQGYVVCDSDKRFLLLFSFLKR 272
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + E G Q+Q R
Sbjct: 273 NQKKKIIVFLSSCNSVRYYAELLNY---IDLPVLELHGKQKQQKR 314
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 62/303 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR+LA Q+
Sbjct: 160 IQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTRELAAQI 218
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ ++ L + VG + + + L K+P I+V
Sbjct: 219 GQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPH---------------------IVV 257
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+
Sbjct: 258 ATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK-------------- 303
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
FLP RR + SAT++ L + L PL ++
Sbjct: 304 -FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVS 339
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HF 355
++ K L L K K +YL+ L + IVFT +V R+ LL F
Sbjct: 340 SSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSF 399
Query: 356 GEL 358
G +
Sbjct: 400 GAI 402
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 150 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 188
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 189 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 235
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 236 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKIEVS 270
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 271 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 328
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 142/320 (44%), Gaps = 65/320 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A Q + P+Q E I G+ RDL + TGSGKT ++A+PI+Q L
Sbjct: 83 PELLEACQALKFDKPTPIQA----EAIPHGIEGRDLIGLAQTGSGKTAAFAIPILQALW- 137
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A A V+ PTR+LA Q+KD F A+ +GL VG + ++ +L+++P
Sbjct: 138 YAQTPYFATVLAPTRELAYQIKDTFDALGSGMGLRSVCIVGGMDMMEQARDLMRKPH--- 194
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRLMDH+ +GF+L L +LV+DE DRLL
Sbjct: 195 ------------------VIVATPGRLMDHLEHLKGFSLRALKFLVMDEADRLL------ 230
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
D E FG + +++ FK P R + SAT+
Sbjct: 231 -----------DME-------------FGPV-------LDKIFKVIPRER-TTYLFSATM 258
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ ++ + RY + L +I K YL+ LL + I
Sbjct: 259 TNKIDKLQRASLTNPVKVSVSD-RYSTVDTLIQSMMIVPDGQKNTYLIYLLNQFEGKSII 317
Query: 337 VFTSSVESTHRLCTLLNHFG 356
+FT + + R L G
Sbjct: 318 IFTRTCAHSQRTALLSRILG 337
>gi|448121647|ref|XP_004204262.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358349801|emb|CCE73080.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 79/355 (22%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D + +P LK A++++G S + VQ TI P L RD+ + TGSGKTL++ +
Sbjct: 116 FDEIGLSEPTLK-AIKDLGFSKMTEVQ----SRTIPPLLAGRDVLGAAKTGSGKTLAFLI 170
Query: 89 PIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ +L + +++ PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 171 PAIELLYSLKFKPRNGTGVIIISPTRELALQIFGVARELMAHHTQTFGIVIGGANRRQEA 230
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L+K V++L+ATPGRL+DH+ T+GF +L LV+DE
Sbjct: 231 EKLMK---------------------GVNLLIATPGRLLDHLQNTKGFVFRNLKALVIDE 269
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ NE+R S
Sbjct: 270 ADRILEIGFEEEMRQIIKIL--PNEDRQS------------------------------- 296
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PL++ E + LE ++C+S + L L
Sbjct: 297 ----MLFSATQTTKVEDLARMSLRPGPLYINVASEAVASTADGLEQGYVVCDSDKRFLLL 352
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
+ L+ ++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 353 FSFLKRNIKKKVIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 400
>gi|281208736|gb|EFA82911.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 698
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 71/351 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ LP ++ + K A+ M + + P+Q +TI P L RDL + TGSGKTL++ +
Sbjct: 196 FNSLP-IEEKTKKAIAEMKFTKMTPIQA----KTIMPLLEGRDLLGAARTGSGKTLAFLI 250
Query: 89 PIVQTL--SNRAVRCLRALVVL-PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ L +N R ++++ PTR+LALQ+ V + + GL +G ++
Sbjct: 251 PAIEILVKANFKPRNGTGVIIISPTRELALQIYGVARELMLNHTQTHGLVIGGNN----- 305
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
D ++ L+ V++LV TPGRL+DH+ TRGF +++L LV+DE
Sbjct: 306 ---------------DKRAEIERLEKGVNLLVCTPGRLLDHLQNTRGFIVKNLKCLVIDE 350
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + +++L LP ER
Sbjct: 351 ADRILEVGFEEDMHQIVKL---------------LPK-------------ERQ------- 375
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYL 323
M+ SAT T+ + +A++ + P+++ + R E LE ++C S+ + L L
Sbjct: 376 ---TMLFSATQTRKVDDIARVSFNKEPVYVGVDDDREVSTVEGLEQGYVVCPSEKRFLLL 432
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ +K IVF SS S LLN G I + E+ G Q+Q R
Sbjct: 433 YTFLKKNLNKKVIVFLSSCNSVKYHAELLNFIG---IPVLEFHGKQKQQKR 480
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 130/299 (43%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L RDL + TGSGKT ++ALPI+Q L N A V+ PTR+LA Q+
Sbjct: 38 IQAQSIPFALQGRDLVALAQTGSGKTAAFALPILQALWNEPSPFF-ACVLAPTRELAYQI 96
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + L KRP I+V
Sbjct: 97 SEQFQALGSTIGVRCAVIVGGMDMMTQSIALSKRPH---------------------IIV 135
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL DH+ T+GF+L+ + YLV+DE DRLL + + T+L++ + +
Sbjct: 136 ATPGRLQDHLENTKGFSLKAIKYLVMDEADRLLDMDFGPVIDTILKIIPRER-------N 188
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T KL + L +P+ +
Sbjct: 189 TFL-------------------------------FSATMTTKVAKLQRASLSNPVKVEV- 216
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y + L K K YLV L L + IVF +V RL +L G
Sbjct: 217 STKYSTVDTLVQEYCFFPFKHKETYLVYLCNELAGKSIIVFVRTVHDAQRLSLILRTLG 275
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 94 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 152
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 153 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 191
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 192 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 238
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 239 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEV- 272
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 273 SNKYQTVEQLQQSYLFIPVKYKDVYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALG 331
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 67/310 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVR 100
+LQ +G + PVQ + TI L +D+ ++ TGSGKT +Y +PI++ L +
Sbjct: 210 SLQQLGFTVPTPVQAS----TIPIALLGKDIVASAQTGSGKTAAYLIPIIERLLYVKNST 265
Query: 101 CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
+A+++ PTR+LA+QV DV + V L+ G+AVG S+ + +L RP
Sbjct: 266 STKAIILTPTRELAIQVHDVGRKLGQFVSNLNFGMAVGGLSLKQQEQQLKTRP------- 318
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
DI++ATPGRL+DHI + F++E + L++DE DR+L E +Q L
Sbjct: 319 --------------DIVIATPGRLIDHIRNSPSFSVEDVQVLIIDEADRMLEEGFQEELT 364
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+L L +P K K L ++ T QD
Sbjct: 365 EILSL---------------IP------------------KQKRQTLLFSATMNNTKIQD 391
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESY--KLICESKLKPLYLVALLQSLGEEKCIV 337
L QL L+ P+ ++ R + +LE ++ +LKP L LL+ L E + +V
Sbjct: 392 ---LVQLSLNKPIKVSIDPPRT-VASKLEQQFVRIRKREELKPAVLYLLLKKL-EGRTVV 446
Query: 338 FTSSVESTHR 347
FT + H+
Sbjct: 447 FTRTKVEAHK 456
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q +I P L D+ + TGSGKT ++A+PI+ +L +
Sbjct: 91 PELLQACKNLNYTKPTPIQ----SRSIPPALKGNDIIGLAQTGSGKTAAFAIPILNSLWH 146
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 147 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 202
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L YLV+DE DRLL +
Sbjct: 203 ------------------IIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGP 244
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ + +T+L SAT+
Sbjct: 245 VLDRILKILPTQGR------TTYL-------------------------------FSATM 267
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YLV LL + I
Sbjct: 268 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLIVVPGGLKDTYLVYLLNEFIGKTTI 326
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + R+ L N
Sbjct: 327 IFTRTKANAERISGLCN 343
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 150 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 188
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 189 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 235
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 236 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 270
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 271 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 328
>gi|326470514|gb|EGD94523.1| ATP-dependent RNA helicase HAS1 [Trichophyton tonsurans CBS 112818]
Length = 568
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 79/359 (22%)
Query: 7 KSMPVLP---WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
K +P LP M P ++ F D L +P +K A+ MG +++ +Q Q
Sbjct: 69 KDVPALPSADTMALPTQEAVSNKFSDLSLS-----EPTVK-AIAGMGFTTMTEIQ----Q 118
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALP---IVQTLSNRAVRCLRALVVLPTRDLALQV 117
I P L RDL + TGSGKTL++ +P I+++L + AL++ PTR+LALQ+
Sbjct: 119 RGIPPSLAGRDLLGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGTGALIITPTRELALQI 178
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
V + + G+ +G ++ +R + E +L V++L+
Sbjct: 179 FGVARELMEHHSQTYGVVIGGAN---------RRAEAE------------KLNKGVNVLI 217
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL+DH+ +T GF ++L LV+DE DR+L ++ L ++ + D+
Sbjct: 218 GTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQ------ 271
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT 296
M+ SAT T LA++ L PL++
Sbjct: 272 -------------------------------TMLFSATQTTKVEDLARISLKPGPLYINV 300
Query: 297 GETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + +E +ICE+ + L L + L+ ++K IVF SS S LLN+
Sbjct: 301 DHKKEHSTVDGVEQGFIICEAHKRFLLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 359
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 146 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 184
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 185 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 231
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 232 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 266
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 267 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 324
>gi|336365891|gb|EGN94240.1| hypothetical protein SERLA73DRAFT_163228 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378572|gb|EGO19730.1| hypothetical protein SERLADRAFT_364022 [Serpula lacrymans var.
lacrymans S7.9]
Length = 561
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 153/352 (43%), Gaps = 71/352 (20%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
P +L +P K AL++MG S++ PVQ ++I P L +D+ + TGSGKTL++
Sbjct: 23 PFSNLDLSEPTNK-ALEDMGFSTMTPVQA----KSIPPLLAGKDVLGAARTGSGKTLAFL 77
Query: 88 LPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
LP V+ L + ++V PTR+LALQ+ V + + G+ +G ++I E
Sbjct: 78 LPAVELLHRLKFKPRNGTGIIIVSPTRELALQIFGVAKDLMAHHSQTFGIVIGGANIRAE 137
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+L+K V++LVATPGRL+DH+ T GF +L LV+D
Sbjct: 138 REKLVK---------------------GVNLLVATPGRLLDHLQNTPGFVFRNLKALVID 176
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DR+L ++ + ++ + +DN
Sbjct: 177 EADRILEIGFEEEMKKIMTILPNDNRQ--------------------------------- 203
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLY 322
M+ SAT T LA++ L PL + E L ++C S + L
Sbjct: 204 ----SMLFSATQTTKVQDLARISLRPGPLHIDVDKEEETSTVSTLSQGYVVCPSDRRFLL 259
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L+ +K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 260 LFTFLRKNLSKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 308
>gi|344231947|gb|EGV63826.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 552
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 157/355 (44%), Gaps = 79/355 (22%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D + +P LK A+++MG ++ VQ +TI P L RD+ + TGSGKTL++ L
Sbjct: 90 FDKVGLSEPTLK-AIEDMGFKTMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLL 144
Query: 89 PIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
P ++ L + + +V+ PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 145 PAIEMLYSLKFKPRNGTGVVVISPTRELALQIFGVARELLAHHTQTFGIVIGGANRRQEA 204
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
++LQ V++L+ATPGRL+DH+ T GF +L L++DE
Sbjct: 205 ---------------------EKLQKGVNLLIATPGRLLDHLQNTEGFVFRNLRALIIDE 243
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR+L ++ + ++++ P
Sbjct: 244 ADRILEIGFEDEMKQIIKIL-------------------------------------PKE 266
Query: 266 RLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ L PL++ ET + LE + CES + L L
Sbjct: 267 ERQTMLFSATQTTKVEDLARISLRPGPLYINVVPETEISTADGLEQGYVTCESDKRFLLL 326
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----RIKIKEYSGLQRQSVR 374
+ L+ ++K IVF SS C + +FGEL + + + G Q+Q R
Sbjct: 327 FSFLKRNVKKKIIVFLSS-------CNCVKYFGELLNYIDLPVLDLHGKQKQQKR 374
>gi|401882105|gb|EJT46378.1| hypothetical protein A1Q1_05025 [Trichosporon asahii var. asahii
CBS 2479]
gi|406700847|gb|EKD04009.1| hypothetical protein A1Q2_01683 [Trichosporon asahii var. asahii
CBS 8904]
Length = 558
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 71/356 (19%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
+E P L P + ++ MG ++ VQ TI P L +D+ + TGSGKT
Sbjct: 65 YERVPFSSLQLSRPTID-SIARMGFETMTEVQA----RTIPPLLAGKDVLGAARTGSGKT 119
Query: 84 LSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
+++ +P V+ L + +++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 120 MAFLVPAVEMLHQLRFKPANGTGVIIISPTRELALQILGVVKDLMQGHSQTFGIVMGGAN 179
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
E +L+K V++LVATPGRL+DH+ T+GF ++L
Sbjct: 180 RKAEADKLVK---------------------GVNLLVATPGRLLDHLQNTKGFIFKNLKA 218
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + ++++ DN
Sbjct: 219 LVIDEADRILEVGFEDEMRQIIKILPDDNRQ----------------------------- 249
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKL 318
M+ SAT T LA++ L PL++ E + + LE ++C+S
Sbjct: 250 --------SMLFSATQTTKVTDLARISLRPGPLYINVDEKKDTSTAQFLEQGYVVCDSDR 301
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 302 RFLLLFTFLKRNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 354
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 153
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 154 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 192
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 193 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 239
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 240 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 274
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 275 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELSGNSFMIFCSTCNNTVKTALMLRALG 332
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 146 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 184
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 185 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 231
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 232 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 266
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 267 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 324
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 145/327 (44%), Gaps = 71/327 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L N+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 247 PVLK-GLANLGYVTPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 301
Query: 97 RAVR--CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LALQV DV IA V ++ GLAVG ++ + L RP
Sbjct: 302 KPAKIASTRVIVLLPTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRP- 360
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 361 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 400
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S +N ++ S
Sbjct: 401 FQDELNEIMGLLPSSRQN--------------------------------------LLFS 422
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL-- 330
AT+ L L L P+ + + + + + ++ LKP + L++ L
Sbjct: 423 ATMNSKIKSLVSLSLKRPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALIFNLIRKLDP 482
Query: 331 -GEEKCIVFTSSVESTHRLCTLLNHFG 356
+++ +VF + ES HRL ++ G
Sbjct: 483 MAQKRIVVFVARKESAHRLRIIMGLLG 509
>gi|255723333|ref|XP_002546600.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
gi|240130731|gb|EER30294.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
Length = 572
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 76/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LFED L +P +K A++ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 114 LFEDADLS-----EPTMK-AIKEMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGK 163
Query: 83 TLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++ L + ++ +++ PTR+LALQ+ V + + G+ +G +
Sbjct: 164 TLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQYHSQTCGIVIGGA 223
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
E ++L K V++LVATPGRL+DH+ T GF +L
Sbjct: 224 DRRQEATKLAK---------------------GVNLLVATPGRLLDHLKNTPGFVFSNLK 262
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ NE+R S
Sbjct: 263 ALVIDEADRILEIGFEDEMKQIIKIL--PNEDRQS------------------------- 295
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ + + LE ++C+S
Sbjct: 296 ----------MLFSATQTTKVEDLARMSLRPGPLYINVVPDKDVSTADGLEQGYVVCDSD 345
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 346 KRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 399
>gi|68473179|ref|XP_719395.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|74656492|sp|Q5ACK7.1|DRS1_CANAL RecName: Full=ATP-dependent RNA helicase DRS1
gi|46441210|gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|238880416|gb|EEQ44054.1| hypothetical protein CAWG_02313 [Candida albicans WO-1]
Length = 613
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 68/324 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+Q A +I L +D+ + TGSGKT +Y +PI++ L + + +++ PTR+
Sbjct: 155 PIQSA----SIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRE 210
Query: 113 LALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
LALQV + ++ V L++GLAVG ++ + +L RP
Sbjct: 211 LALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP------------------- 251
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
DI++ATPGRL+DHI + F+++ + LV+DE DR+L E +Q L +L L
Sbjct: 252 --DIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLI------ 303
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
P + ++ SAT+ L QL L P
Sbjct: 304 -------------------------------PKHKRQTLLFSATMNTRIQDLIQLSLQKP 332
Query: 292 LFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 350
+ + + + L+ + ++ +LKP L LL+ + + +VF + E+ HRL
Sbjct: 333 VRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS-SRVVVFVARKETAHRLRI 391
Query: 351 LLNHFGELRIKIKEYSGLQRQSVR 374
+L G L +K+ E G Q R
Sbjct: 392 VL---GLLGLKVSELHGALTQEQR 412
>gi|315047684|ref|XP_003173217.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
gi|311343603|gb|EFR02806.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
Length = 567
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 161/360 (44%), Gaps = 79/360 (21%)
Query: 6 KKSMPVLP---WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+K +P LP M P ++ F D L +P +K A+ MG +++ +Q
Sbjct: 66 EKDVPALPSADTMALPTQEAVSNKFSDLSLS-----EPTVK-AIAGMGFTTMTEIQ---- 115
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALP---IVQTLSNRAVRCLRALVVLPTRDLALQ 116
Q I P L RD+ + TGSGKTL++ +P I+++L + AL++ PTR+LALQ
Sbjct: 116 QRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGTGALIITPTRELALQ 175
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ V + + G+ +G ++ +R + E +L V++L
Sbjct: 176 IFGVARELMEHHSQTYGVVIGGAN---------RRAEAE------------KLNKGVNVL 214
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
+ TPGRL+DH+ +T GF ++L LV+DE DR+L ++ L ++ + D+
Sbjct: 215 IGTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQ----- 269
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT 295
M+ SAT T LA++ L PL++
Sbjct: 270 --------------------------------TMLFSATQTTKVEDLARISLKPGPLYIN 297
Query: 296 TGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + +E +ICE+ + L L + L+ ++K IVF SS S LLN+
Sbjct: 298 VDHKKEHSTVDGVEQGFIICEAHKRFLLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 357
>gi|121708606|ref|XP_001272186.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143019610|sp|A1CIQ5.1|HAS1_ASPCL RecName: Full=ATP-dependent RNA helicase has1
gi|119400334|gb|EAW10760.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 625
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 154/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+ MG ++ +Q + TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 157 AINEMGFETMTEIQ----RRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 212
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 213 RNGTGVLVVSPTRELALQIFGVARELCQHHSQTYGIVIGGANRRAEAEKLMK-------- 264
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 265 -------------GVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEM 311
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 312 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 334
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 335 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 394
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 395 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 429
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 139/310 (44%), Gaps = 70/310 (22%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLP 109
P+Q AV + L RD+C + TGSGKT ++ LP+++ + +R R A LV++P
Sbjct: 203 PIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPLLERMLHRGARAAAATHVLVLVP 258
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
TR+LA+QV + +A + L VG S + +EL RP
Sbjct: 259 TRELAVQVHQMTMRLAQFTSIRAALVVGGLSANTQAAELRTRP----------------- 301
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
+I+VATPGRL+DH+ T LE L LV+DE DRLL +L + ++
Sbjct: 302 ----EIVVATPGRLIDHVRNTHSVGLEDLAALVLDEADRLL---EMGFLEEIREI----- 349
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+R C P R M+ SATLT +LA+ +
Sbjct: 350 --------------------VRHC---------PTRRQT-MLFSATLTSGVQELAEFSMK 379
Query: 290 HPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
HP L+ G T L E + + S +K +L+AL+ +K IVF+ + + H
Sbjct: 380 HPARLSADQIGTTPGTLTEEVLRLRPGAAS-MKEAHLMALVNRTFTKKSIVFSRTKQQAH 438
Query: 347 RLCTLLNHFG 356
RL ++ G
Sbjct: 439 RLKIVMGLAG 448
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 138/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ ++ P+Q + I L RD+ + TGSGKT ++ LPI+Q L ++ +
Sbjct: 101 ACENLKFTTPTPIQT----QAIPLALEGRDVIGLAETGSGKTAAFVLPILQALLDKP-QA 155
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ A+ + + VG + + L KRP
Sbjct: 156 LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPH-------- 207
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L+HL Y+V+DE DRLL + L +
Sbjct: 208 -------------IVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKI 254
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ D + + + SAT++
Sbjct: 255 LRVLPRDGRHTY-------------------------------------LFSATMSSKVE 277
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P+ ++ + +++ L L K K LYL+ LL I+FT +
Sbjct: 278 SLQRAALQNPVRVSISSSSHQVVSTLLQRYLFIPHKHKDLYLIHLLTDNIGHPTIIFTRT 337
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 338 VNETERIAILLRALG 352
>gi|410931566|ref|XP_003979166.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like, partial
[Takifugu rubripes]
Length = 697
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 158/364 (43%), Gaps = 78/364 (21%)
Query: 22 SLFEDCP-------LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
S FED D + P LK A+ +G P+Q A + GL RDLC
Sbjct: 171 SFFEDASQYNDQLTFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVGLLGRDLCA 225
Query: 75 NSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ TG+GKT ++ LP+++ L R + R LV++PTR+L +QV V +A ++
Sbjct: 226 CAATGTGKTAAFVLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHAVTRQLAQFTSITT 285
Query: 133 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 192
LAVG G+ ++V L++ D+L+ATPGRL+DH++ T
Sbjct: 286 CLAVG-------------------GLDLKSQEVA--LRAGPDVLIATPGRLIDHLHNTPS 324
Query: 193 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 252
F L H+ L++DE DR+L E ++ + +++L
Sbjct: 325 FELSHIEILILDEADRMLDEYFEEQMKEIIRL---------------------------- 356
Query: 253 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 312
C R M+ SAT++++ LA + L P+ + P + +
Sbjct: 357 CSYNRQ----------TMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEFVR 406
Query: 313 ICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 370
I +K + + ALL ++ + FT + + HRL LL G +K+ E G
Sbjct: 407 IRPNKEGDREAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLMG---LKVGELHGELS 463
Query: 371 QSVR 374
Q+ R
Sbjct: 464 QNQR 467
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 139/339 (41%), Gaps = 68/339 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-S 95
P L A MG +Q E I L RDL TGSGKT ++ LPI+Q L
Sbjct: 50 PELVAACDAMGWKEPTRIQA----EAIPHALEGRDLIGLGQTGSGKTGAFGLPIIQALLK 105
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
+ L A V+ PTR+LA Q+ F A+ A+GLS + VG + L KRP
Sbjct: 106 QDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPH-- 163
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
I+V TPGRL+DH+ T+GF+L L YLV+DE D+LL +Q
Sbjct: 164 -------------------IVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQ 204
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
L +L + + TFL SAT
Sbjct: 205 KALDDILNVIPKERR-------TFL-------------------------------FSAT 226
Query: 276 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+T +KL + L +P+ + ++Y + L + K +LV +L L
Sbjct: 227 MTNKVSKLQRACLRNPVKVEVA-SKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMI 285
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++F + EST L L + LR K SG Q R
Sbjct: 286 MIFVRTCESTRLLALTLRN---LRFKAISISGQMSQDKR 321
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 66/328 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
L + P L+ AL+ M +Q E + + RD+ + TGSGKT+++AL
Sbjct: 17 FKELGVIGPLLE-ALEQMNFKKPTDIQA----EALPHAISGRDIIGVAETGSGKTVAFAL 71
Query: 89 PIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
PI+Q L + L A V+ PTR+LA Q+ F ++ A+G+ + VG ++ D+ L
Sbjct: 72 PILQRLWEEP-KGLFACVLAPTRELAYQISQQFESLGSAIGVRCAVIVGGMNMVDQAVAL 130
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
KRP I+VATPGRL DH+ T+GF+L + +LV+DE DR
Sbjct: 131 AKRPH---------------------IVVATPGRLNDHLENTKGFSLRGIKFLVLDEADR 169
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
LL + + +L++ + +T+L
Sbjct: 170 LLDMDFGPIIDKILKVIPKER-------TTYL---------------------------- 194
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 328
SAT+T KL + L +P+ + + +Y L Y L K K + L+ +
Sbjct: 195 ---FSATMTTKVAKLQRASLTNPVRVEVSK-KYTTVSTLLQYYLFIPYKQKEVNLIHMCN 250
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+L + I+FT +V RL +L G
Sbjct: 251 TLSQNSIIIFTRTVMDCQRLALILKTLG 278
>gi|317138177|ref|XP_001816731.2| ATP-dependent RNA helicase has1 [Aspergillus oryzae RIB40]
gi|91206843|sp|Q2UUN6.2|HAS1_ASPOR RecName: Full=ATP-dependent RNA helicase has1
gi|391869999|gb|EIT79187.1| ATP-dependent RNA helicase pitchoune [Aspergillus oryzae 3.042]
Length = 596
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
++ MG ++ VQ + TI P L RD+ + TGSGKTLS+ +P ++ LS +
Sbjct: 133 GIEGMGFETMTEVQ----RRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 188
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
A++V PTR+LALQ+ + + G+ +G ++ E +L+K
Sbjct: 189 RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLMK-------- 240
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++LVATPGRL+DH+ T+GF ++L L++DE DR+L ++ +
Sbjct: 241 -------------GVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEM 287
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+ ++ S+N M+ SAT T
Sbjct: 288 RQIAKILPSENRQ-------------------------------------TMLFSATQTT 310
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 311 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 370
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + + G Q+Q R
Sbjct: 371 VFLSSCNSVKYYGELLNY---IDLPVLDLHGKQKQQKR 405
>gi|300123001|emb|CBK24008.2| unnamed protein product [Blastocystis hominis]
Length = 457
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 68/311 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
+D+ + TGSGKTL++ +P+++ LS + + A+++ PTR+LA+Q+ V +A
Sbjct: 16 KDVLGAAKTGSGKTLAFVIPVIELLSRLKWKQRQGTGAIIITPTRELAMQIFGVVTDLAS 75
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
A GL+ G+ +G ++ E S+L+K + IL+ATPGRL+DH
Sbjct: 76 AHGLTHGIVMGGANRKSEASKLVK---------------------GISILIATPGRLLDH 114
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
+ T+GF E+L LV+DE DR+L+ ++ + +++L LP
Sbjct: 115 LQNTKGFNFENLQCLVIDEADRILQIGFEEDMKAIMRL---------------LPK---- 155
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGET-RYKLP 304
+ M+ SAT ++ LA+L L +P+++ +
Sbjct: 156 -------------------KRQTMLFSATQDKNVQGLAKLSLSDNPVYIGVHDACEEATV 196
Query: 305 ERLESYKLICESKLKPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 363
RLE ++C S + L L L +++ ++K +VF SS S LLN+ + I +
Sbjct: 197 SRLEQGYVVCGSDQRFLLLYTFLKKNIQKKKIMVFFSSCNSVQFHAELLNY---IDIPVM 253
Query: 364 EYSGLQRQSVR 374
G Q+Q R
Sbjct: 254 CIHGKQKQQRR 264
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 154 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 192
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 193 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 239
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 240 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 274
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 275 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 332
>gi|66812114|ref|XP_640236.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
gi|74897113|sp|Q54S03.1|DDX18_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx18; AltName:
Full=DEAD box protein 18
gi|60468220|gb|EAL66230.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
Length = 602
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 72/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E +LP ++ K +++ MG + P+Q ++I P L +DL + TGSGKTL
Sbjct: 117 ESIEFSNLP-IEENTKKSIEEMGFKKMTPIQA----KSILPLLEGKDLLGAARTGSGKTL 171
Query: 85 SYALPIVQTL--SNRAVRCLRALVVL-PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
++ +P ++ L SN R ++++ PTR+LALQ+ V + + G+ +G +S
Sbjct: 172 AFLIPAIEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKYHTQTHGIVIGGAS- 230
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
K+P+ E L+ V++LVATPGRL+DH+ T+GF ++L L
Sbjct: 231 --------KKPEEE------------RLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCL 270
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
++DE DR+L ++ + ++ K
Sbjct: 271 IIDEADRILEVGFEEEMHQII-------------------------------------KK 293
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLK 319
P R M+ SAT T+ + +A++ L++ P+++ + R E LE ++C S+ +
Sbjct: 294 VPKTRQT-MLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERR 352
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ +K IVF SS + LLN+ + I + E G Q+Q R
Sbjct: 353 FLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNY---IDIPVLELHGRQKQQKR 404
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L K+P I++
Sbjct: 154 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH---------------------III 192
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ +GF L+ + YLV+DE DR+L ++ L +L++
Sbjct: 193 ATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV------------- 239
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP RR + SAT+T+ KL + L P+ +
Sbjct: 240 --LPRE-------RRT----------------FLFSATMTKKVKKLQRASLKDPVKVEVS 274
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ E+L+ L K K +YLV +L L ++F S+ +T + +L G
Sbjct: 275 -NKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 332
>gi|83764585|dbj|BAE54729.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 531
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
++ MG ++ VQ + TI P L RD+ + TGSGKTLS+ +P ++ LS +
Sbjct: 68 GIEGMGFETMTEVQ----RRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 123
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
A++V PTR+LALQ+ + + G+ +G ++ E +L+K
Sbjct: 124 RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLMK-------- 175
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++LVATPGRL+DH+ T+GF ++L L++DE DR+L ++ +
Sbjct: 176 -------------GVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEM 222
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+ ++ S+N M+ SAT T
Sbjct: 223 RQIAKILPSENRQ-------------------------------------TMLFSATQTT 245
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 246 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 305
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + + G Q+Q R
Sbjct: 306 VFLSSCNSVKYYGELLNY---IDLPVLDLHGKQKQQKR 340
>gi|299746292|ref|XP_001837876.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
gi|298406988|gb|EAU83976.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
Length = 816
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 149/330 (45%), Gaps = 76/330 (23%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P D+S F D P+ + K L+ + +Q ++I L +D+ +
Sbjct: 49 PPDLSAFADLPISE------QTKRGLKKASFVKMTDIQA----KSIPLSLKGKDVLGAAR 98
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ +P+++ L R L AL++ PTR+LA+Q+ +V AI P S GL
Sbjct: 99 TGSGKTLAFLIPVLEVLYRRKWGPTDGLGALIISPTRELAVQIFEVLRAIGPFHSFSAGL 158
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G ++ DE L S ++ILVATPGRL+ H++ T GF
Sbjct: 159 VIGGKNLKDERDRL----------------------SRMNILVATPGRLLQHMDQTVGFD 196
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
++L LV+DE DR+L +Q L +L + LP + +L
Sbjct: 197 TDNLQMLVLDEADRILDMGFQRTLSALL---------------SHLPKSRQTL------- 234
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYK 311
+ SAT T+ + LA+L L P ++ G + +P+ LE +
Sbjct: 235 ----------------LFSATQTESVSDLARLSLKDPEYVGVKEAGSSGSYIPDSLEQHY 278
Query: 312 LICESKLKPLYLVALLQSLGEEKCIVFTSS 341
+I E K L + +++ + K +VF SS
Sbjct: 279 VITELDKKLDVLWSFIKTHLQSKVLVFLSS 308
>gi|392597205|gb|EIW86527.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 562
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L +MG+S++ +Q ++I P L RD+ + TGSGKTL++ +P V+ L +
Sbjct: 37 GLADMGLSTMTSIQA----KSIPPLLAGRDVLGAARTGSGKTLAFLIPCVELLHRMKFKP 92
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
++V PTR+LALQ+ +V + + G+ +G ++ E
Sbjct: 93 RNGTGIIIVSPTRELALQIFEVARDLMAYHSQTFGVVMGGANQRAES------------- 139
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
++LQ V++LVATPGRL+DH+ T+GF +L LV+DE DR+L ++ +
Sbjct: 140 --------EKLQKGVNLLVATPGRLLDHLQNTKGFVFRNLKALVIDEADRILEVGFEEEM 191
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++ + NENR S M+ SAT T
Sbjct: 192 KRIISIL--PNENRQS-----------------------------------MLFSATQTT 214
Query: 279 DPNKLAQLDLH-HPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
N LA++ L PL + GE L ++C S+ + L L L+ ++K I
Sbjct: 215 KVNDLARMSLRPGPLHIDVDGEETTSTVSTLSQGYVVCPSERRFLLLFTFLKKNLKKKVI 274
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + I + + G Q+Q R
Sbjct: 275 VFFSSCNSVKYHGELLNY---IDIPVLDLHGKQKQQKR 309
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 61/287 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + L K+P IL+
Sbjct: 103 SEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH---------------------ILI 141
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L +LV+DE DR+L ++ + +L++
Sbjct: 142 ATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV------------- 188
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 189 --IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVEVS 223
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
T+Y+ E+L+ Y + K K + AL + + + I+ ++ V S
Sbjct: 224 -TKYQTVEKLQQYYIFIPVKFKNKRIAALTKFKAKNRSILISTDVAS 269
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|326478694|gb|EGE02704.1| ATP-dependent RNA helicase has1 [Trichophyton equinum CBS 127.97]
Length = 568
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 79/359 (22%)
Query: 7 KSMPVLP---WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
K +P LP M P ++ F D L +P +K A+ MG +++ +Q Q
Sbjct: 69 KDVPALPSADTMALPTQEAVSNKFSDLSLS-----EPTVK-AIAGMGFTTMTEIQ----Q 118
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALP---IVQTLSNRAVRCLRALVVLPTRDLALQV 117
I P L RD+ + TGSGKTL++ +P I+++L + AL++ PTR+LALQ+
Sbjct: 119 RGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGTGALIITPTRELALQI 178
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
V + + G+ +G ++ +R + E +L V++L+
Sbjct: 179 FGVARELMEHHSQTYGVVIGGAN---------RRAEAE------------KLNKGVNVLI 217
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL+DH+ +T GF ++L LV+DE DR+L ++ L ++ + D+
Sbjct: 218 GTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQ------ 271
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT 296
M+ SAT T LA++ L PL++
Sbjct: 272 -------------------------------TMLFSATQTTKVEDLARISLKPGPLYINV 300
Query: 297 GETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + +E +ICE+ + L L + L+ ++K IVF SS S LLN+
Sbjct: 301 DHKKEHSTVDGVEQGFIICEAHKRFLLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 359
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR+LA Q+
Sbjct: 83 IQEKSIPVALQNRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTRELAHQI 141
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ ++ L + VG + + L K+P I+V
Sbjct: 142 GQSFEALGSSISLRCAVIVGGLDMVPQAVALGKKPH---------------------IIV 180
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 181 ATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLK-------------- 226
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SATL+ L + L P+ ++
Sbjct: 227 -FIPRE-------RRT----------------YLFSATLSSKVESLQRASLRDPVRVSVS 262
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L L+ K YL+ L+ + I+FT +V T R+ LL G
Sbjct: 263 SNKYQTVSTLLQNLLVIPQMRKDTYLIYLVNEFTGKSTIIFTRTVWETQRIAILLRTLG 321
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 140/319 (43%), Gaps = 64/319 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 130 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 186 WHDQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH- 243
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 244 --------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEF 283
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L +L++ P + SA
Sbjct: 284 GPVLDRILKII-------------------------------------PTQERTTYLFSA 306
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T +KL + L +P+ +Y+ + L ++ LK YL+ LL +
Sbjct: 307 TMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKT 365
Query: 335 CIVFTSSVESTHRLCTLLN 353
I+FT + + RL L N
Sbjct: 366 MIIFTRTKANAERLSGLCN 384
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IVIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 326 IFTRTKANAERLSGLCN 342
>gi|328848641|gb|EGF97845.1| hypothetical protein MELLADRAFT_46164 [Melampsora larici-populina
98AG31]
Length = 659
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 70/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A++ MG + VQ TI P + RD+ + TGSGKTL++ +P V+ L
Sbjct: 134 LSPGTAKAIEEMGFKHMTEVQA----RTIPPLMTGRDVLGAARTGSGKTLAFLVPAVEML 189
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S + A++V PTR+LALQ+ V + + + +G ++ E +LIK
Sbjct: 190 SRLQFKPRNGTGAIIVSPTRELALQIFGVAQELMKHHSQTFAITIGGANRKAEAEKLIK- 248
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++L++TPGRL+DH+ T+GF +L L++DE DR+L
Sbjct: 249 --------------------GVNLLISTPGRLLDHLQNTKGFVFSNLKALIIDEADRILE 288
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + ++ L S ENR S M+
Sbjct: 289 IGFEDEMRKIISLLPS--ENRQS-----------------------------------ML 311
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + + LE ++CES+ + L L L+
Sbjct: 312 FSATQTTKVQDLARISLRPGPLYINVDANKQDATVQGLEQGYVVCESEKRFLLLFTFLKK 371
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+K IVF SS S LLN+ + I + G Q+Q R
Sbjct: 372 SLNKKVIVFFSSCNSVKYHGELLNY---IDIPALDLHGKQKQQKR 413
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 132 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 187
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 188 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 243
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 244 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 285
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 286 VLDRILKII-------------------------------------PTQERTTYLFSATM 308
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 309 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 367
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 368 IFTRTKANAERLSGLCN 384
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 132 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 187
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 188 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 243
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 244 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 285
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 286 VLDRILKII-------------------------------------PTQERTTYLFSATM 308
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 309 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 367
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 368 IFTRTKANAERLSGLCN 384
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 132 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 187
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 188 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 243
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 244 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 285
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 286 VLDRILKII-------------------------------------PTQERTTYLFSATM 308
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 309 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 367
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 368 IFTRTKANAERLSGLCN 384
>gi|146323887|ref|XP_751498.2| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|91206842|sp|Q4WQM4.2|HAS1_ASPFU RecName: Full=ATP-dependent RNA helicase has1
gi|129557486|gb|EAL89460.2| ATP-dependent RNA helicase, putative [Aspergillus fumigatus Af293]
gi|159125568|gb|EDP50685.1| ATP-dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 622
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 155/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+ +MG ++ +Q + TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 154 AINDMGFETMTEIQ----RRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 209
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 210 RNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMK-------- 261
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 262 -------------GVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEM 308
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 309 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 331
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 332 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 391
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 392 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 426
>gi|145342120|ref|XP_001416141.1| DEAD-box helicase, probable [Ostreococcus lucimarinus CCE9901]
gi|144576366|gb|ABO94434.1| DEAD-box helicase, probable [Ostreococcus lucimarinus CCE9901]
Length = 446
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 157/356 (44%), Gaps = 62/356 (17%)
Query: 26 DCPLDHLPC--LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
+CP P LD RL L + SL PVQ + G FERDLC+ +PTGSGKT
Sbjct: 21 ECPRQITPVSPLDHRLYATLARGQLHSLLPVQKQTLSRALA-GSFERDLCVTAPTGSGKT 79
Query: 84 LSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
LSY LP++Q LS R + L+++P+ DL+ QV + + A+ + + + VG+S
Sbjct: 80 LSYLLPVLQILSKRVSKAETVCLILVPSGDLSAQVCVAASELCKALHVQISI-VGKSRNT 138
Query: 143 DEISELIKRPKLEAGICYDPEDVLQ-----------ELQSAVDILVATPGRLMDHINATR 191
++L+ + + + + + + Q L ILVA+PGR H R
Sbjct: 139 TNSTKLVNK-RYRRLLAQNRQRMYQCCITRQFARHNSLDVPSQILVASPGRFAAH----R 193
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
L+ L LV+DE DR+L+++YQ WL T+ D E + R
Sbjct: 194 TSILKKLKLLVIDEADRMLQQSYQNWLVTL------DYE------------MCARTRQCR 235
Query: 252 RCGVERGFKDKPYPRLVKMVLSATLTQDP---------NKLAQLDLHHPLFLTTGETRYK 302
R V ++ RL + SATL +++ D PL
Sbjct: 236 RLTV----GERNSERLQLIFCSATLQSSCLQRVGAFALDRINAYDSVCPL---------- 281
Query: 303 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
LP L Y ++ E K LV+LL+ EK IVF++SV + LN L
Sbjct: 282 LPITLSEYAIVAEHTDKFDALVSLLEFFKGEKVIVFSASVYRARHILQRLNKLENL 337
>gi|119499912|ref|XP_001266713.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143019652|sp|A1CW14.1|HAS1_NEOFI RecName: Full=ATP-dependent RNA helicase has1
gi|119414878|gb|EAW24816.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 622
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 155/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+ +MG ++ +Q + TI P L RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 154 AINDMGFDTMTEIQ----RRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 209
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 210 RNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMK-------- 261
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 262 -------------GVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEM 308
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 309 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 331
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 332 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 391
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 392 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 426
>gi|385303016|gb|EIF47118.1| nucleolar dead-box protein required for synthesis of 60s ribosomal
subunits [Dekkera bruxellensis AWRI1499]
Length = 410
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 69/312 (22%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
+D+ + TGSGKT +Y +PI++ L + V R +++ PTR+LA+QV DV I+
Sbjct: 3 KDVVAGAQTGSGKTAAYLIPIIERLLYKPAHVASTRVVIMAPTRELAIQVADVARRISQF 62
Query: 128 V-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
V G+++G+AVG S+ + EL KRP DI++ATPGR +DH
Sbjct: 63 VSGITIGMAVGGLSLRKQELELKKRP---------------------DIVIATPGRFIDH 101
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
+ + F+++++ +V+DE DR+L E + A + +LQL LP +
Sbjct: 102 VRNSPSFSVDNVEIMVLDEADRMLEEGFHAEITEILQL---------------LPQKRQT 146
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 306
M+ SAT+ + + L QL L P + +
Sbjct: 147 -----------------------MLFSATMNSNISDLIQLSLQKPARIMIDPPKAAASGL 183
Query: 307 LESY-KLICESKLKP--LY-LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 362
L+ + ++ LKP LY ++A L S + + IVF ++ HRL ++ G +K+
Sbjct: 184 LQEFVRIRKRDGLKPALLYDVLAKLXSNNQSRIIVFVATKTLAHRLRIVMGLLG---LKV 240
Query: 363 KEYSGLQRQSVR 374
E G Q R
Sbjct: 241 XELHGALSQEQR 252
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 133/303 (43%), Gaps = 62/303 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR+LA Q+
Sbjct: 136 IQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTRELAAQI 194
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ ++ L + VG + + L K+P I+V
Sbjct: 195 GQTFEALGASISLRCAVVVGGLDMVSQSIALGKKPH---------------------IVV 233
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+
Sbjct: 234 ATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK-------------- 279
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
FLP RR + SAT++ L + L PL ++
Sbjct: 280 -FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVS 315
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HF 355
++ K L L K K +YL+ L + IVFT +V R+ LL F
Sbjct: 316 SSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSF 375
Query: 356 GEL 358
G +
Sbjct: 376 GAI 378
>gi|118572555|sp|Q0UR48.1|HAS1_PHANO RecName: Full=ATP-dependent RNA helicase HAS1
Length = 610
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 155/345 (44%), Gaps = 72/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L R A++ MG S+ +Q ++ I P L +D+ + TGSGKTL++ +P ++ L
Sbjct: 138 LSERTMEAIKTMGFESMTEIQ----RKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEML 193
Query: 95 SNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S+ + +VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 194 SSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFGIVIGGANRRAEAEKLAK- 252
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++L+ATPGRL+DH++ T+GF ++L L++DE DR+L
Sbjct: 253 --------------------GVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILE 292
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + +++++ +D + M+
Sbjct: 293 VGFEDEMRSIIKILPTDRQT--------------------------------------ML 314
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + E LE +IC+S + L + L+
Sbjct: 315 FSATQTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQGYVICDSDTRFRLLFSFLKK 374
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFG----ELRIKIKEYSGLQR 370
++K IVF SS S LLN+ EL K+K+ + R
Sbjct: 375 HQKKKVIVFFSSCNSVKFYAELLNYIDLPVLELHGKLKQQARTNR 419
>gi|50305787|ref|XP_452854.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660562|sp|Q6CT85.1|RRP3_KLULA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49641987|emb|CAH01705.1| KLLA0C14608p [Kluyveromyces lactis]
Length = 487
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 76 PELIEACKNLNYNKPTPIQ----SKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLWH 131
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG S+ D+ +L+++P
Sbjct: 132 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPH--- 187
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF L L YLV+DE DRLL +
Sbjct: 188 ------------------IIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGP 229
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L + + +T+L SAT+
Sbjct: 230 VLDRILNIIPTQGR------TTYL-------------------------------FSATM 252
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 253 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKSTI 311
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + R+ L N
Sbjct: 312 VFTRTKANAERISNLCN 328
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 71/327 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L N+G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 226 PVLK-GLANLGYVMPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 280
Query: 97 RAVR--CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LALQV DV IA V ++ GLAVG ++ + L RP
Sbjct: 281 KPAKIASTRVIVLLPTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRP- 339
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 340 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 379
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L LPS+ +L + S
Sbjct: 380 FQDELNEIMGL---------------LPSSRQNL-----------------------LFS 401
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL-- 330
AT+ L L L P+ + + + + + ++ LKP + L++ L
Sbjct: 402 ATMNSKIKSLVSLSLKRPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALIFNLIRKLDP 461
Query: 331 -GEEKCIVFTSSVESTHRLCTLLNHFG 356
+++ +VF + ES HRL ++ G
Sbjct: 462 MAQKRIVVFVARKESAHRLRIIMGLLG 488
>gi|297736067|emb|CBI24105.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 67/303 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 23 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLD-TPQV 77
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A V+ PTR+LA+Q+ + F A+ +GL + VG + L KRP
Sbjct: 78 LFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKRPH-------- 129
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+V TPGRLMDH++ T+GF+L + YLV+DE DRLL + ++ + +
Sbjct: 130 -------------IVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEI 176
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDP 280
L + PR K L SAT+T+
Sbjct: 177 LSVI---------------------------------------PRERKTYLFSATMTKKV 197
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
KL + L +P+ + ++Y + L+ +K K YLV +L L +VFT
Sbjct: 198 RKLQRACLRNPVKIEVA-SKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTR 256
Query: 341 SVE 343
+ +
Sbjct: 257 TCD 259
>gi|302682610|ref|XP_003030986.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
gi|300104678|gb|EFI96083.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
Length = 775
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 145/331 (43%), Gaps = 77/331 (23%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P D+ LF D P+ K L+ ++ VQ +++ L +D+ +
Sbjct: 48 PDDLKLFSDLPISQA------TKRGLKKAAFINMTDVQA----KSLPVSLKGKDVLGAAR 97
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ +P+++ L R L AL++ PTR+LA+Q+ +V +I P S GL
Sbjct: 98 TGSGKTLAFLIPVLEILYRRKWGPADGLGALIISPTRELAVQIFEVLRSIGPFHSFSAGL 157
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G ++ DE L++ ++ILVATPGRL+ H++ T GF
Sbjct: 158 VIGGKNLKDERDRLVR----------------------MNILVATPGRLLQHMDQTYGFE 195
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
++L LV+DE DR+L + L +L G L R+
Sbjct: 196 CDNLQVLVLDEADRILDMGFAKTLSALL----------------------GHLPKSRQT- 232
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK----LPERLESY 310
++ SAT T + LA+L L P F+ T E P+ LE +
Sbjct: 233 ---------------LLFSATQTDSVSDLARLSLTDPAFIATKEAEESHTATTPKNLEQH 277
Query: 311 KLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
IC K L + +++ + K +VF SS
Sbjct: 278 YAICTLDQKLDLLWSFIKTHLQSKTLVFLSS 308
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 59/300 (19%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ A+ +G++V VG + L K+P ++
Sbjct: 135 ISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKP---------------------HVV 173
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V +PGR++DH+ T+GF+L+ + LV+DE DRLL + A L +L+ S E +
Sbjct: 174 VGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ---- 229
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
M+ SAT+T +KL + L P+ L
Sbjct: 230 --------------------------------TMLFSATMTTKVSKLQKASLKKPVKLEV 257
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ + L+ KLK +L A L L IVFT++ + + L H G
Sbjct: 258 -NSKYDVASHLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLG 316
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 59/300 (19%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ A+ +G++V VG + L K+P ++
Sbjct: 135 ISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKP---------------------HVV 173
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V +PGR++DH+ T+GF+L+ + LV+DE DRLL + A L +L+ S E +
Sbjct: 174 VGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ---- 229
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
M+ SAT+T +KL + L P+ L
Sbjct: 230 --------------------------------TMLFSATMTTKVSKLQKASLKKPVKLEV 257
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ + L+ KLK +L A L L IVFT++ + + L H G
Sbjct: 258 -NSKYDVASHLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLG 316
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 73/320 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A N+G + +Q+ E I L +D+ + TGSGKT ++ALPI+ L N
Sbjct: 23 ACDNLGWKTPLKIQI----EAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLQAPRPN 78
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
C V+ PTR+LA+Q+ + F A+ +G+ + VG + + ++ K P
Sbjct: 79 HFFAC----VLSPTRELAIQISEQFEALGSGIGVKSAVLVGGIDMVQQSIKIAKHPH--- 131
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I+V TPGR++DH+ T+GF+L L YLV+DE DRLL E ++
Sbjct: 132 ------------------IIVGTPGRVLDHLKNTKGFSLSKLKYLVLDEADRLLNEDFEE 173
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L + + TFL SAT+
Sbjct: 174 SLNEILGMIPRERR-------TFL-------------------------------FSATM 195
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T+ KL ++ L +P+ + T+Y + L+ +K K YLV +L + +
Sbjct: 196 TKKVEKLQRVCLRNPVKIEA-STKYSTVDTLKQQYRFLPAKRKDCYLVYILTEMAGSTSM 254
Query: 337 VFTSSVESTHRLCTLLNHFG 356
VFT + ++T L +L + G
Sbjct: 255 VFTRTCDATRLLALILRNLG 274
>gi|331219074|ref|XP_003322214.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301204|gb|EFP77795.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 785
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 31/203 (15%)
Query: 26 DCPLDHLP---CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
D P LP L + + L +M I+S P+Q ++ I GL +DL +S TGSGK
Sbjct: 242 DQPFSSLPGAASLSRPVLLGLSSMSITSPTPIQ----RQAIPLGLLGKDLVCSSVTGSGK 297
Query: 83 TLSYALPIVQTLSNRAVRC---LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL Y +PIV+ L R + R +++ PTR+LA+QV V +A L+ L VG
Sbjct: 298 TLGYMVPIVERLIWRDKKGGGRTRVMILTPTRELAVQVFQVGKLLARFTDLTFSLCVGGM 357
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
+ + +EL +RP +I++ TPGR++DHI TRGF+LE L
Sbjct: 358 DLRTQEAELRERP---------------------EIVIGTPGRVIDHIRNTRGFSLETLE 396
Query: 200 YLVVDETDRLLREAYQAWLPTVL 222
LV+DE DR+L E +Q L ++
Sbjct: 397 ILVIDEADRILEEGFQDELEEII 419
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 59/300 (19%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
+ Q+ I L RD+ + TGSGKT ++ALP++Q L + R L A+V+ PTR+LA Q
Sbjct: 59 GIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQR-LFAVVLAPTRELAFQ 117
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ +VF A+ ++GL VG + + L ++P ++
Sbjct: 118 IHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPH---------------------VV 156
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T+GF + +LV+DE DR+L ++ + +L + + R
Sbjct: 157 VATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRR---- 212
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
++ SAT+T KL + L P+ +
Sbjct: 213 --------------------------------TLLFSATMTSKVAKLQRASLTDPVKVEA 240
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ ++ P L L +K K YL L + +VF ++ + RL LL + G
Sbjct: 241 SD-KFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLG 299
>gi|401624697|gb|EJS42747.1| drs1p [Saccharomyces arboricola H-6]
Length = 747
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 71/327 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 236 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 290
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA + G++ GLAVG ++ + L RP
Sbjct: 291 KPAKIAATRVIVLLPTRELAIQVADVGKQIARFLPGITFGLAVGGLNLRQQEQLLKTRP- 349
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 350 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 389
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 390 FQDELSEIMGLLPSNRQN--------------------------------------LLFS 411
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL-- 330
AT+ L L L P+ + + + + ++ LKP L L++ L
Sbjct: 412 ATMNSKIKSLVSLSLKRPVRIMIDPPKQAAARLTQEFVRIRKRDHLKPSLLFNLIRKLDP 471
Query: 331 -GEEKCIVFTSSVESTHRLCTLLNHFG 356
G+++ +VF + E+ HRL ++ G
Sbjct: 472 MGQKRIVVFVARKETAHRLRIVMGLLG 498
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q++I L RD+ + TGSGKT ++ALP++Q L + V+ PTR+LA Q+
Sbjct: 30 IQQQSIPYSLQSRDIIGLAQTGSGKTAAFALPVIQLLYDNPAPYF-CCVLAPTRELAYQI 88
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +GL VG + + L K+P I+V
Sbjct: 89 SEQFEALGSNIGLRTATIVGGMDMMTQSIALSKKPH---------------------IIV 127
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL DH+ T+GF+L ++ +LV+DE DRLL + + +L++
Sbjct: 128 ATPGRLHDHLENTKGFSLRNIKFLVMDEADRLLDMDFGPIIDKLLKI------------- 174
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
LP ER M+ SAT+T KL + L +P+ +
Sbjct: 175 --LPK-------------ER----------TTMLFSATMTTKVAKLQRASLSNPVKVEVS 209
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ +Y+ L + L K+K YLV L + I+FT +V R+ +L + G
Sbjct: 210 D-KYQTVSTLLQHYLFFPFKMKDSYLVYLANEVAGHSMIIFTRTVVDAQRISIILRNLG 267
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 67/303 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 57 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QV 111
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A V+ PTR+LA+Q+ + F A+ +GL + VG + L KRP
Sbjct: 112 LFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKRP--------- 162
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+V TPGRLMDH++ T+GF+L + YLV+DE DRLL + ++ + +
Sbjct: 163 ------------HIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEI 210
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDP 280
L + PR K L SAT+T+
Sbjct: 211 LSVI---------------------------------------PRERKTYLFSATMTKKV 231
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 340
KL + L +P+ + ++Y + L+ +K K YLV +L L +VFT
Sbjct: 232 RKLQRACLRNPVKIEVA-SKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTR 290
Query: 341 SVE 343
+ +
Sbjct: 291 TCD 293
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 67/319 (21%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 98
L+ AL+NMG +Q Q T+ +D+ + TGSGKT ++A+P++Q L +
Sbjct: 70 LQEALKNMGYKCPTKIQAESLQYTLKG----KDIIGLAETGSGKTAAFAIPVIQQLLDNP 125
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+ A V+ PTR+L +Q+ + F AI +GL + VG + + L K P
Sbjct: 126 -QPFFACVMSPTRELCVQIAEQFEAIGAGIGLRTAVLVGGLDMVSQAIALSKNPH----- 179
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
+++ TPGR+ DH+ T+GF L+ L +L+ DE DRLL ++ +
Sbjct: 180 ----------------VVIGTPGRMADHLANTKGFHLKKLKFLIFDEADRLLSMDFEKQI 223
Query: 219 PTVL-QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 277
+L Q+ +S N T+L SAT+T
Sbjct: 224 NLILTQIPKSRN--------TYL-------------------------------FSATMT 244
Query: 278 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
KL + L+ P+ + ++YK + L + K K YLV LL +K I+
Sbjct: 245 SKVQKLQRASLNDPVKIEVS-SKYKTVDTLVQNYIFIPEKHKETYLVYLLTQFAGQKMII 303
Query: 338 FTSSVESTHRLCTLLNHFG 356
FT++ + +L +L +
Sbjct: 304 FTTTCNQSMKLALILRNLN 322
>gi|345567599|gb|EGX50528.1| hypothetical protein AOL_s00075g164 [Arthrobotrys oligospora ATCC
24927]
Length = 633
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 76/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LF+D L + A+ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 151 LFKDVKLSE------NTQKAITEMGFTKMTEVQA----KTIPPLLAGRDVLGAAKTGSGK 200
Query: 83 TLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P V+ LS+ + +VV PTR+LALQ+ V + + G+ +G +
Sbjct: 201 TLAFLIPAVEMLSSLRFKPRNGTGVVVVSPTRELALQIFHVARELTKHHSQTCGIVIGGA 260
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
+ E +L K +++L+ATPGRL+DH+ T+GF ++L
Sbjct: 261 NRRAEAEKLSK---------------------GINLLIATPGRLLDHLQNTQGFVFKNLK 299
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ LP K R+
Sbjct: 300 ALVIDEADRILEVGFEDEMRQIIKI---------------LP------KQDRQS------ 332
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ + + E LE +ICE+
Sbjct: 333 ----------MLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEAD 382
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 383 KRFLLLFSFLKRNLKKKVIVFFSSCNSVKYYAELLNY---IDLPVLDLHGNQKQQKR 436
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 150/348 (43%), Gaps = 72/348 (20%)
Query: 15 MRSPVDVSLFEDCP------LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
M SP D S P L +DP L+ AL+ +G S +Q E++ L
Sbjct: 1 MPSPEDASTSSATPEAQKHTFKSLGLIDPLLE-ALEQVGYKSPTEIQ----SESLPHALE 55
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+ F A+ A+
Sbjct: 56 GRDIIGVAETGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQISQQFEALGAAM 114
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
G + VG + + L KRP ++VATPGRL+ H+
Sbjct: 115 GARCAVIVGGMDLPTQAIALAKRPH---------------------VVVATPGRLLQHLE 153
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
T+GF+L L +LV+DE DRLL + + +L+L + +T+L
Sbjct: 154 ETKGFSLRTLKFLVLDEADRLLDMDFGPAIDKILKLIPKER-------TTYL-------- 198
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
SAT+T KL + L +P+ + +Y+ L
Sbjct: 199 -----------------------FSATMTSKVAKLQRASLVNPVRVEV-SGKYQTVSTLL 234
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ L+ K K + L+ L SL + I+FT +V L +L G
Sbjct: 235 QHYLLVPLKDKVVMLIYLANSLAQNSIIIFTRTVRDARLLSIILRTLG 282
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 92 PELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRLWH 147
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 148 DQ-EPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 203
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 204 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 245
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 246 VLDRILKII-------------------------------------PTQERTTYLFSATM 268
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 269 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQALMVVPGGLKNTYLIYLLNESIGKTMI 327
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 328 IFTRTKANAERLSGLCN 344
>gi|429327957|gb|AFZ79717.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 457
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 140/314 (44%), Gaps = 65/314 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S +Q+ E I P L +D+ + TGSGKT ++ +PI+Q+L ++ R
Sbjct: 54 ACRELGWKSPTNIQI----EAIPPALEGKDVIGLAETGSGKTAAFTIPILQSLLDKPQR- 108
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+L +Q+ + F A+ ++ L V + +G + + +L KRP
Sbjct: 109 LYALVLAPTRELCVQITEQFKALGSSIALDVCMILGGLDMVSQALQLSKRPH-------- 160
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+V +PGRL DH+ T+GF++E + +LV+DE DRLL + L +
Sbjct: 161 -------------IIVGSPGRLADHLENTKGFSIETMKFLVLDEADRLLSMDFDDALDKI 207
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L +L RR + SAT+T
Sbjct: 208 LN----------------------ALPKERRT----------------FLFSATMTSKVA 229
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL ++ L P+ + T+Y + L L+ K K YL ALL G ++F ++
Sbjct: 230 KLQKVSLIKPVKIHVN-TKYSTSQLLVQKYLLIPLKFKWTYLAALLMHFGGYTAMIFCNT 288
Query: 342 VESTHRLCTLLNHF 355
+ C L +
Sbjct: 289 CLGAQKCCLYLRNL 302
>gi|401839240|gb|EJT42545.1| RRP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 64/319 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 90 LVPELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRL 145
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 WHDQ-EPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH- 203
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 204 --------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEF 243
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L +L++ P + SA
Sbjct: 244 GPVLDRILKII-------------------------------------PTQERTTYLFSA 266
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T +KL + L +P+ +Y+ + L ++ LK YL+ LL +
Sbjct: 267 TMTSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQALMVVPGGLKNTYLIYLLNESIGKT 325
Query: 335 CIVFTSSVESTHRLCTLLN 353
I+FT + + RL L N
Sbjct: 326 MIIFTRTKANAERLSGLCN 344
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 59/300 (19%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 58 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQQLLQRTQR-FYALILAPTRELCLQ 116
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ A+ ++G++V VG + L K+P ++
Sbjct: 117 ISQQMLAMGGSLGVTVVTLVGGLDHNTQAIALAKKP---------------------HVV 155
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V +PGR++DH+ T+GF+L+ + LV+DE DRLL + A L +L+ S E +
Sbjct: 156 VGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ---- 211
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
M+ SAT+T +KL + L P+ L
Sbjct: 212 --------------------------------TMLFSATMTTKVSKLQKASLKKPVKLEV 239
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ + L+ KLK +L A L L IVFT++ + + L H G
Sbjct: 240 -NSKYDVASLLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARTIALFLRHLG 298
>gi|56202232|dbj|BAD73664.1| putative DEAD box protein [Oryza sativa Japonica Group]
gi|56202381|dbj|BAD73793.1| putative DEAD box protein [Oryza sativa Japonica Group]
Length = 423
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 138/315 (43%), Gaps = 55/315 (17%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQVKD 119
E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q+
Sbjct: 12 EVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIAK 71
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
F A+ A+ L + +SS A L K +D + +E S V T
Sbjct: 72 QFEALGSAISLQCSVVWWRSSRACLPEHLRK--------GFDSWQLWKERNSRV----GT 119
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGRL+DH+ T+GF+ L YLV+DE D LL+ +Q + +L + + TF
Sbjct: 120 PGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERR-------TF 172
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
L SAT+T+ KL + L +P+ + +
Sbjct: 173 L-------------------------------FSATMTEKVKKLRRACLKNPVKVEVA-S 200
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 359
+Y L + L + +K K YL+ +L + +VF + EST L +L + LR
Sbjct: 201 KYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LR 257
Query: 360 IKIKEYSGLQRQSVR 374
K SG Q R
Sbjct: 258 FKAISISGQMSQDKR 272
>gi|301610484|ref|XP_002934776.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 399
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 99 LAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKP-------------------- 138
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 139 -HVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 195
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L P+
Sbjct: 196 -----TFL-------------------------------FSATMTKKVQKLQRAALKDPV 219
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ + + SK K L +L + + + I+ + V S
Sbjct: 220 KCAVS-SKYQTVEKLQQFYVFIPSKFKNKRLGSLNKFKAKSRSILLATDVAS 270
>gi|452823641|gb|EME30650.1| ATP-dependent RNA helicase DEAD [Galdieria sulphuraria]
Length = 558
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 70/324 (21%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SN 96
L VA++ +G P+Q V I L RD+C ++ TGSGKT ++A+PI++ L S
Sbjct: 110 LLVAIRQLGWEVPTPIQDKV----IPLALVGRDICASAVTGSGKTGAFAVPILEKLWRSA 165
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
V +R +V+LPTR+LALQ K VF ++ + + + LA+G ++ E L + P
Sbjct: 166 SKVSLVRVIVILPTRELALQCKQVFTELSKNMDIDIELAIGGLAVRAEQDALQRCP---- 221
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
DI++ TPGR++DHI T+GF+++ + +V+DE DRLL +
Sbjct: 222 -----------------DIVIGTPGRIIDHIRNTKGFSVDDVEIVVLDEADRLLDLGFSE 264
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L + IR C P+ ++ SAT+
Sbjct: 265 ELEEI----------------------------IRSCS----------PKRQTLLFSATM 286
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLES-YKLICES---KLKPLYLVALLQSLGE 332
T +LA L L P + + Y++ + LE + LI + + YL+AL
Sbjct: 287 TTSVQQLALLSLKEPANIVV-DPLYEVSKTLEQEFVLISDGNNVNKRISYLLALCCRTYT 345
Query: 333 EKCIVFTSSVESTHRLCTLLNHFG 356
++ I+F S H++ + G
Sbjct: 346 QRVILFFSKRSVAHQIFIIFGMLG 369
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 158/350 (45%), Gaps = 92/350 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
AL +G S+ P+QVA TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 199 ALTALGFSTPTPIQVA----TIPVALLGKDVVGNAVTGSGKTAAFMIPVLERLMYRERGK 254
Query: 98 ---AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
AVRC+ V++PTR+L +Q DV ++ + + + L VG S+ + +EL RP
Sbjct: 255 NKAAVRCV---VLVPTRELGVQCVDVAKKLSAFMDVRISLIVGGLSLKSQEAELRTRP-- 309
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
DI++ATPGRL+DH+ + F LE L L++DE DR+L + +
Sbjct: 310 -------------------DIVIATPGRLIDHLRNSPSFGLETLDVLILDEADRMLSDGF 350
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L ++Q C P R M+ SA
Sbjct: 351 ADELKEIIQA----------------------------C---------PTSRQT-MLFSA 372
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE--------SKLKPLYLVAL 326
T+T D + L ++ L+ P+ L + P+R + LI E + LVAL
Sbjct: 373 TMTDDVDALVRMSLNRPVKL------FVDPKRSTARGLIQEFVRVRAGKEAERAALLVAL 426
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG--LQRQSVR 374
+ ++ IVF S + H++ + FG L +K +E G Q Q +R
Sbjct: 427 CKRTFKQGVIVFFRSKKLAHQMRVV---FGILGMKAEELHGDLTQEQRLR 473
>gi|327306545|ref|XP_003237964.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
gi|326460962|gb|EGD86415.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
Length = 565
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 163/359 (45%), Gaps = 79/359 (22%)
Query: 7 KSMPVLP---WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
K +P LP M P ++ F D L +P +K A+ MG +++ +Q Q
Sbjct: 66 KDVPALPSADTMALPTQEAVSNKFSDLSLS-----EPTVK-AISGMGFTTMTEIQ----Q 115
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALP---IVQTLSNRAVRCLRALVVLPTRDLALQV 117
I P L RD+ + TGSGKTL++ +P I+++L + AL++ PTR+LALQ+
Sbjct: 116 RGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGTGALIITPTRELALQI 175
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
V + + G+ +G ++ +R + E +L V++L+
Sbjct: 176 FGVARELMEHHSQTYGVVIGGAN---------RRAEAE------------KLNKGVNVLI 214
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL+DH+ +T GF ++L LV+DE DR+L ++ L ++ +
Sbjct: 215 GTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISI------------- 261
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT 296
LP K R+ M+ SAT T LA++ L PL++
Sbjct: 262 --LP------KEDRQT----------------MLFSATQTTKVEDLARISLKPGPLYINV 297
Query: 297 GETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + +E +ICE+ + L L + L+ ++K IVF SS S LLN+
Sbjct: 298 DHKKEHSTVDGVEQGFIICEAHKRFLLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 356
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 145/340 (42%), Gaps = 68/340 (20%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
SP D F D + C A+ N+G +Q V + + +D+ +
Sbjct: 47 SPEDNKTFSDYGVCDTLCQ------AIDNLGWKHPSSIQRDVLKIALQEDQ-NKDIIAIA 99
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
TGSGKT ++A+PI+Q L + R + AL+V PTR+LA Q+ + F A+ +VGL + V
Sbjct: 100 ETGSGKTGAFAIPIIQRLIDNPQR-MYALIVTPTRELAFQISEQFEALGSSVGLKTAVIV 158
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + L ++P ++V TPGRL+DH+ T+GF+L
Sbjct: 159 GGIDMVQQALALARKPH---------------------VVVGTPGRLVDHLENTKGFSLN 197
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+ YLV+DE DR L ++ + +L S F
Sbjct: 198 TMKYLVLDEADRCLSMDFEEAIDKIL-------------------SCF------------ 226
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
P R V + SAT+TQ KL + L P+ + ++Y+ L L +
Sbjct: 227 ------PKER-VTYLFSATMTQKVVKLQRASLQDPVKIQV-SSKYQTVSTLIQQYLFIPA 278
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K K YL ++ + I+F S+ S+ L L + G
Sbjct: 279 KYKECYLAFIMNEFRGKSTILFVSTCSSSQLLTLFLRNLG 318
>gi|432859445|ref|XP_004069111.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Oryzias
latipes]
Length = 771
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 156/360 (43%), Gaps = 72/360 (20%)
Query: 20 DVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S F+D D + P LK A+ +G P+Q A + L RDLC + T
Sbjct: 190 DASQFDDQLSFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVSLLGRDLCACAAT 244
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
G+GKT ++ LP+++ L R + R LV++PTR+L +QV V +A ++ LAV
Sbjct: 245 GTGKTAAFMLPVLERLIYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAV 304
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + EA + P D+L+ATPGRL+DH++ T F L
Sbjct: 305 GGLDLKSQ----------EAALRAGP-----------DVLIATPGRLIDHLHNTPNFELS 343
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
H+ L++DE DR+L E ++ + +++L C
Sbjct: 344 HIEILILDEADRMLDEYFEEQMKEIIRL----------------------------CSYN 375
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
R M+ SAT+T++ LA + L P+ + P + + I
Sbjct: 376 RQ----------TMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFIRIRPH 425
Query: 317 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + + ALL ++ ++FT + + HRL LL G +K+ E G Q+ R
Sbjct: 426 REGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMG---LKVGELHGELSQNQR 482
>gi|302496482|ref|XP_003010242.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
gi|291173784|gb|EFE29602.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
Length = 542
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 79/360 (21%)
Query: 6 KKSMPVLP---WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+K +P LP M P ++ F D L +P +K A+ MG +++ +Q
Sbjct: 68 QKDVPALPSADTMALPTQEAVSNKFSDLSLS-----EPTVK-AIAGMGFTTMTEIQ---- 117
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALP---IVQTLSNRAVRCLRALVVLPTRDLALQ 116
Q I P L RD+ + TGSGKTL++ +P I+++L + AL++ PTR+LALQ
Sbjct: 118 QRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGTGALIITPTRELALQ 177
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ V + + G+ +G ++ +R + E +L V++L
Sbjct: 178 IFGVARELMEHHSQTYGVVIGGAN---------RRAEAE------------KLNKGVNVL 216
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
+ TPGRL+DH+ +T GF ++L LV+DE DR+L ++ L ++ +
Sbjct: 217 IGTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISI------------ 264
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT 295
LP K R+ M+ SAT T LA++ L PL++
Sbjct: 265 ---LP------KEDRQT----------------MLFSATQTTKVEDLARISLKPGPLYIN 299
Query: 296 TGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + +E +ICE+ + L L + L+ ++K IVF SS S LLN+
Sbjct: 300 VDHKKEHSTVDGVEQGFIICEAHKRFLLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 359
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 75/329 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK L ++G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 249 PVLK-GLAHLGYTKPSPIQSA----TIPVALQGKDVIAGAVTGSGKTAAFMIPIIERLLF 303
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
V R +V+ PTR+LA+Q+ DV I V GL+ GLAVG ++ + L RP
Sbjct: 304 KPSKVAMTRVIVLTPTRELAIQISDVAKKIGQFVSGLTFGLAVGGLNLRQQEQALKARP- 362
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 363 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVLDEADRMLEEG 402
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ T LPS +L + S
Sbjct: 403 FQDELKEIM---------------TMLPSKRQNL-----------------------LFS 424
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
AT+ L L L P+ + + KL + E ++ LKP L L++ L
Sbjct: 425 ATMNSKIKSLVSLSLRRPVRIMIDPPKQAASKLTQ--EFVRIRKRDNLKPALLFNLIRKL 482
Query: 331 ---GEEKCIVFTSSVESTHRLCTLLNHFG 356
+++ +VF + E+ HRL +L G
Sbjct: 483 DSNAQKRIVVFVARKETAHRLRIILGLLG 511
>gi|348544540|ref|XP_003459739.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Oreochromis
niloticus]
Length = 736
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 157/360 (43%), Gaps = 72/360 (20%)
Query: 20 DVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S ++D D + P LK A+ +G P+Q A + GL +DLC + T
Sbjct: 158 DASQYDDQLTFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVGLLGKDLCACAAT 212
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
G+GKT ++ LP+++ L R + R LV++PTR+L +QV V +A ++ LAV
Sbjct: 213 GTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAV 272
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + EA + P DIL+ATPGRL+DH++ T F L
Sbjct: 273 GGLDLKSQ----------EAALRAGP-----------DILIATPGRLIDHLHNTPSFELT 311
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
H+ L++DE DR+L E ++ + +++L C
Sbjct: 312 HIEILILDEADRMLDEYFEEQMKEIIRL----------------------------CSYN 343
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
R M+ SAT+T++ LA + L P+ + P + + I
Sbjct: 344 RQ----------TMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFVRIRPH 393
Query: 317 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + + ALL ++ ++FT + + HRL LL G +K+ E G Q+ R
Sbjct: 394 REGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMG---LKVGELHGELSQNQR 450
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A N+ + P+Q + I P L +D+ + TGSGKT ++A+PI+ L +
Sbjct: 75 PELIEACDNLNFTKPTPIQ----SKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWH 130
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 131 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH--- 186
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF L L +LV+DE DRLL
Sbjct: 187 ------------------IIIATPGRLMDHLENTKGFALRKLQFLVMDEADRLL------ 222
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
D E FG + ++R K+ P + SAT+
Sbjct: 223 -----------DME-------------FGPV-------LDRILKNIPTKGRTTYLFSATM 251
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 252 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKTTI 310
Query: 337 VFTSSVESTHRLCTLLN 353
VFT + + R+ L N
Sbjct: 311 VFTRTKANAERISGLCN 327
>gi|302653108|ref|XP_003018385.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
gi|291182028|gb|EFE37740.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
Length = 948
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 68/329 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP-- 89
L +P +K A+ MG +++ +Q Q I P L RD+ + TGSGKTL++ +P
Sbjct: 160 LSLSEPTVK-AIAGMGFTTMTEIQ----QRGIPPSLAGRDILGAAKTGSGKTLAFLIPAV 214
Query: 90 -IVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
I+++L + AL++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 215 EILRSLKFKPRNGTGALIITPTRELALQIFGVARELMEHHSQTYGVVIGGAN-------- 266
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
+R + E +L V++L+ TPGRL+DH+ +T GF ++L LV+DE DR
Sbjct: 267 -RRAEAE------------KLNKGVNVLIGTPGRLLDHLRSTEGFVFKNLKTLVIDEADR 313
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L ++ L ++ + LP K R+
Sbjct: 314 ILEVGFEDELRQII---------------SILP------KEDRQT--------------- 337
Query: 269 KMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVAL 326
M+ SAT T LA++ L PL++ + + + +E +ICE+ + L L +
Sbjct: 338 -MLFSATQTTKVEDLARISLKPGPLYINVDHKKEHSTVDGVEQGFIICEAHKRFLLLFSF 396
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
L+ ++K IVF SS S LLN+
Sbjct: 397 LKKNAKKKIIVFFSSCNSVKYYSELLNYI 425
>gi|448091961|ref|XP_004197457.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|448096550|ref|XP_004198488.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359378879|emb|CCE85138.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359379910|emb|CCE84107.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
Length = 719
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 77/303 (25%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLA 114
A+ I L +D+ + TGSGKT +Y +PI++ L + + +R +V+ PTR+LA
Sbjct: 231 AIQSSAIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPSKISAIRVIVLTPTRELA 290
Query: 115 LQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 173
+QV DV I V L+ GLAVG ++ + +L RP
Sbjct: 291 IQVHDVGKKIGRFVNNLNFGLAVGGLNLRQQEQQLKSRP--------------------- 329
Query: 174 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 233
DI++ATPGRL+DHI + F+++ L +V+DE DR+L E +QA L +L L
Sbjct: 330 DIVIATPGRLIDHIRNSPSFSIDTLEIMVIDEADRMLDEGFQAELTEILSLV-------- 381
Query: 234 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 293
P + ++ SAT+ L QL L P+
Sbjct: 382 -----------------------------PKQKRQTLLFSATMNTKIQDLIQLSLDRPVR 412
Query: 294 LTTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVE 343
+ P + + KL+ E LKP L LL ++ +++ +VF S+
Sbjct: 413 IMID------PPKATTAKLVQEFVRIRKRDHLKPALLFELLNTIDSSNQDRIVVFVSTKG 466
Query: 344 STH 346
+ H
Sbjct: 467 TAH 469
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 68/340 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+DP++ A + +G F + ++ I L +D+ + TGSGKT ++++P++Q L
Sbjct: 20 VDPQIVEACKKLG----FKNPTEIQRKAIPEALAGKDIVGLAQTGSGKTAAFSIPMLQAL 75
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ L LV+ PTR+LA+Q+ D A+ +G+ + VG + L K+P
Sbjct: 76 LAKP-SGLFGLVLAPTRELAVQISDQIEALGAVIGVKCAVLVGGIDTMSQSMALAKKPH- 133
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+V TPGR++ H+ T+GF L+ L Y V+DE DRLL +
Sbjct: 134 --------------------IIVGTPGRVVYHLENTKGFNLKTLKYFVMDEADRLLGMDF 173
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + T+L++ D +TFL SA
Sbjct: 174 EEEINTILKVIPKDR-------NTFL-------------------------------FSA 195
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L+ P+ + T+Y + L+ + K K YL +L L
Sbjct: 196 TMTSKVAKLQRASLNDPVKIQVA-TKYSTVDTLQQEYIFIPYKHKECYLTYILNELAGNS 254
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
I+FTS+ ++ +L +L + L K +G QS R
Sbjct: 255 VIIFTSTCAASTKLAIMLRN---LSFKAIPINGQMDQSKR 291
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 65/311 (20%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
MG + P+Q A E L ERD+ + TGSGKT ++ALPI+Q+L + A + +L
Sbjct: 36 MGWRAPTPIQCAAVPE----ALRERDVIGLAQTGSGKTGAFALPILQSLLD-APQGFHSL 90
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
++ PTR+LA+Q+ + + VG VG + + +L KRP
Sbjct: 91 ILSPTRELAMQIAEQIETLGAGVGARTATLVGGVDMTTQAIKLGKRPH------------ 138
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
++V TPGR++DH+ T+GF+L L LV+DE DRLL ++ + +L++
Sbjct: 139 ---------VIVGTPGRVVDHLENTKGFSLRALKVLVLDEADRLLNLDFEEEIDKILRVI 189
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
SD + SAT+T KL +
Sbjct: 190 PSDRRTQL--------------------------------------FSATMTNKVAKLQR 211
Query: 286 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 345
L P+ + +Y E L+ + L +K K Y L L IVF + ++T
Sbjct: 212 ACLRDPVKVEV-SAKYSTVESLKQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDAT 270
Query: 346 HRLCTLLNHFG 356
+L + + G
Sbjct: 271 RKLALIARNLG 281
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ +L +
Sbjct: 93 PELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNSLWH 148
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 149 DQ-QPYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKPH--- 204
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
+++ATPGRLMDH+ T+GF+L L YLV+DE DRLL +
Sbjct: 205 ------------------VIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGP 246
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 247 VLDRILKIL-------------------------------------PTQGRTTYLFSATM 269
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 270 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLIVVPGGLKNTFLIYLLNEYIGKSTI 328
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + R+ L N
Sbjct: 329 IFTRTKANAERISGLCN 345
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 66/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G ++ P+Q + I L RDL + TGSGKT ++ LP++Q L ++ +
Sbjct: 42 ACEELGYTAPTPIQ----ERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQALMDKP-QQ 96
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
+L++ PTR+LA Q+ A+ + + L +G + + L K+P
Sbjct: 97 FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGKKPH-------- 148
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 149 -------------VIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKL 195
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+L LP K K Y + SAT++
Sbjct: 196 LRL---------------LP------------------KRKTY------LFSATMSSKVE 216
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P+ ++ + L+SY L K K YLV LL + I+FT +
Sbjct: 217 SLQRASLSDPVRVSVSTKNQTASKLLQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRT 275
Query: 342 VESTHRLCTLLNHFG 356
V T RL +L + G
Sbjct: 276 VHETQRLSIMLRNLG 290
>gi|389751758|gb|EIM92831.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 537
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 71/352 (20%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
P L +P K AL MG +++ PVQ ++I P L +D+ + TGSGKTL++
Sbjct: 22 PFSTLELSEPTQK-ALAEMGFTTMTPVQA----KSIPPLLAGKDVLGAARTGSGKTLAFL 76
Query: 88 LPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+P V+ L + ++V PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 77 IPAVELLHRLKFKPRNGTGIIIVSPTRELALQIFGVAKELMAHHSQTFGIVIGGANRRAE 136
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+L+K V+++VATPGRL+DH+ T+GF +L LV+D
Sbjct: 137 ADKLVK---------------------GVNLIVATPGRLLDHLQDTKGFVFRNLKALVID 175
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DR+L ++ + ++ + NENR S
Sbjct: 176 EADRILEVGFEEEMKRIISIL--PNENRQS------------------------------ 203
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLKPLY 322
M+ SAT T LA++ L PL++ G L ++C S + L
Sbjct: 204 -----MLFSATQTTKVQDLARISLRPGPLYIDVHGSEETSTVATLSQGYVVCPSDRRFLL 258
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L+ ++K +VF SS S LLN+ + + + + G Q+Q R
Sbjct: 259 LFTFLKKNLKKKIVVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 307
>gi|358055768|dbj|GAA98113.1| hypothetical protein E5Q_04796 [Mixia osmundae IAM 14324]
Length = 620
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+Q MG +++ VQ IGP + RD+ + TGSGKTL++ LP ++ L +
Sbjct: 111 AIQEMGFTTMTEVQA----RCIGPIMAGRDVLGAAQTGSGKTLAFLLPAIEMLHQLRFKP 166
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ V + + + +G ++ E +L+K
Sbjct: 167 RNGTGVIVISPTRELALQIFGVVKELCKHHNQTFAIVMGGANRKAEAEKLVK-------- 218
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V+++V TPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 219 -------------GVNLVVGTPGRLLDHLQNTKGFIFKNLKQLVIDEADRILEIGFEDEM 265
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ +DN M+ SAT T
Sbjct: 266 RQIVKILPNDNRQ-------------------------------------TMLFSATQTT 288
Query: 279 DPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
+ LA++ L PL++ R LE ++C+S + L L L+ ++K I
Sbjct: 289 KVSDLARVSLRQGPLYINVDSHRDTSTVAGLEQGYVVCDSDKRFLLLFTFLRKNIKKKII 348
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + I + + G Q+Q R
Sbjct: 349 VFFSSCNSVKYHGELLNY---VDIPVLDLHGKQKQQKR 383
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 142/329 (43%), Gaps = 71/329 (21%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L + P LK A++ M FP + I L +DL +S TGSGKT ++ +PI+
Sbjct: 195 LGLIKPLLK-AVEEMQYE--FPTNIQSL--AIPAALQGKDLLASSLTGSGKTAAFLIPIL 249
Query: 92 QTLSNR-AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 150
Q +AL+V PTR+LA Q+ +VF + L L +GQS++ + +EL
Sbjct: 250 QKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRG 309
Query: 151 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 210
P ++++ATPGRL+DH+ +R L++L L+ DE D+LL
Sbjct: 310 NP---------------------EVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLL 348
Query: 211 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 270
++A + + C ER +
Sbjct: 349 DLGFEAAAQNI----------------------------VENCNRERQ----------TL 370
Query: 271 VLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVALL 327
+ SATLT + NKL + L P+ + G+T KL +++ I + L+A+
Sbjct: 371 LFSATLTSEVNKLIDIALRKPIRIQANPDGQTNDKLIQKMLR---IQHEDFREAALLAIA 427
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+E+ I+F + THR+ + FG
Sbjct: 428 AKYYKERTIIFFKTKRQTHRMAIIFGLFG 456
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 137/311 (44%), Gaps = 68/311 (21%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L A L
Sbjct: 1 MKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE-AQTPYFGL 55
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
V+ P R+LA Q+K+ F A+ +G+ VG + D+ +L+++P
Sbjct: 56 VLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPH------------ 103
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
I++ATPGR+MDH+ T+GF+L+ L Y V+DE D+LL + L +L+
Sbjct: 104 ---------IIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQI 154
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
S +T+L SAT+T KL +
Sbjct: 155 PSKR-------TTYL-------------------------------FSATMTNKIEKLQR 176
Query: 286 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 345
LH+P+ + ++Y+ + L ++ K YL+ LL + I+F + T
Sbjct: 177 ASLHNPVRVAV-SSKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHT 235
Query: 346 HR---LCTLLN 353
R LC +L
Sbjct: 236 QRTSILCRILG 246
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 142/325 (43%), Gaps = 66/325 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ + +QV E + L RD+ + TGSGKT ++ALPI+
Sbjct: 542 LGLIDPLLE-ALEQLNFKHPTDIQV----EALPHALQGRDIIGVASTGSGKTAAFALPIL 596
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + L A V+ PTR+LA Q+ F + A+G+ VG + + L KR
Sbjct: 597 QKLWEEP-KGLFACVLAPTRELAYQISQQFEGLGSAMGVRCVTIVGGLDMMAQSVALAKR 655
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL
Sbjct: 656 PH---------------------IVVATPGRLIDHLENTKGFSLRGLKFLVLDEADRLLD 694
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ + +L++ + +T+L
Sbjct: 695 MDFGPIIDKILKIIPKER-------TTYL------------------------------- 716
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
SAT+T KL + L +P+ + E +Y L Y L K ++L+ L +L
Sbjct: 717 FSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYYLFIPLVQKDVHLIYLANTLA 775
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
+ I+FT +V RL +L G
Sbjct: 776 QNSIIIFTRTVHDAQRLSIILRTLG 800
>gi|406605499|emb|CCH43143.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 740
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 28/186 (15%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
L +G + P+Q A TI L +D+ + TGSGKT +Y +P+++ L + +
Sbjct: 245 GLSTLGYQTPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAYMIPVIERLLYKPAKL 300
Query: 101 -CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGI 158
R +V+ PTR+LA+QV DV I V GLS GLAVG ++ + EL +RP
Sbjct: 301 ASTRVIVLTPTRELAIQVNDVGKKIGKFVNGLSFGLAVGGLNLRQQEQELKQRP------ 354
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
DI++ATPGR++DH+ + F ++ + L+VDE DR+L E +Q L
Sbjct: 355 ---------------DIVIATPGRIIDHLRNSPSFNVDGVEILIVDEADRMLEEGFQKEL 399
Query: 219 PTVLQL 224
+L +
Sbjct: 400 TEILDI 405
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 135/318 (42%), Gaps = 64/318 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQ 116
+ E I L RD+ TGSGKT ++ALPI+Q L R A V+ PTR+LA+Q
Sbjct: 9 IQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPRFLACVLAPTRELAIQ 68
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ F A+ A+ L + +G + L KRP ++
Sbjct: 69 IAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPH---------------------VV 107
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V TPGRL+DH+ T+GF+ L YLV+DE D LL+ +Q + +L + +
Sbjct: 108 VGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERR------ 161
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
TFL SAT+T+ KL + L +P+ +
Sbjct: 162 -TFL-------------------------------FSATMTEKVKKLRRACLKNPVKVEV 189
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y L + L + +K K YL+ +L + +VF + EST L +L +
Sbjct: 190 A-SKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN-- 246
Query: 357 ELRIKIKEYSGLQRQSVR 374
LR K SG Q R
Sbjct: 247 -LRFKAISISGQMSQDKR 263
>gi|320582556|gb|EFW96773.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 568
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ--- 92
+P +K +Q+MG + + VQ TI P L +D+ + TGSGKTL++ +P ++
Sbjct: 121 EPTMK-GIQDMGFTKMTEVQA----RTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLY 175
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+L + A+V+ PTR+LALQ+ V + ++G+ +G ++ E +L K
Sbjct: 176 SLKFKPRNGAGAIVITPTRELALQIFGVARELMAHHSQTLGILIGGANRRQEAEKLAK-- 233
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++++ATPGRL+DH+ T+GF ++L L++DE DR+L
Sbjct: 234 -------------------GVNLIIATPGRLLDHLQNTKGFIFKNLKTLIIDEADRILEI 274
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE R S M+
Sbjct: 275 GFEDEMKQIVKIL--PNEKRQS-----------------------------------MLF 297
Query: 273 SATLTQDPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L+ PL++ + R + LE ++C+S + L L + L+
Sbjct: 298 SATQTTKVEDLARVSLNKAPLYINVHQDRETSTADGLEQGYVVCDSDKRFLLLFSFLKRN 357
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS LLN+ + + + + G Q+Q R
Sbjct: 358 LKKKVIVFLSSCNCVKYYSELLNY---IDLPVLDLHGKQKQQKR 398
>gi|354543386|emb|CCE40105.1| hypothetical protein CPAR2_101430 [Candida parapsilosis]
Length = 578
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
+P +K A++ MG + + VQ +TI P L RD+ + TGSGKTL++ +P ++ +
Sbjct: 121 EPTMK-AIREMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELMY 175
Query: 96 NRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ ++ +++ PTR+LALQ+ V + + G+ +G + E ++L K
Sbjct: 176 SLKIKPRNGTAVIIITPTRELALQIFGVARQLMEHHSQTCGIVIGGADRRQEATKLAK-- 233
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++LVATPGRL+DH+ T+GF +L L++DE DR+L
Sbjct: 234 -------------------GVNLLVATPGRLLDHLKNTQGFVFSNLKALIIDEADRILEI 274
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R + M+
Sbjct: 275 GFEEEMKQIIKIL--PNEDRQT-----------------------------------MLF 297
Query: 273 SATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ E + LE ++C+S + L L + L+
Sbjct: 298 SATQTTKVEDLARISLRPGPLYINVVSERDVSTADGLEQGYVVCDSDKRFLLLFSFLKRN 357
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 358 VKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 398
>gi|67522985|ref|XP_659553.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
gi|74657502|sp|Q5BBY1.1|HAS1_EMENI RecName: Full=ATP-dependent RNA helicase has1
gi|40745958|gb|EAA65114.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
gi|259487308|tpe|CBF85879.1| TPA: ATP-dependent RNA helicase has1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BBY1] [Aspergillus
nidulans FGSC A4]
Length = 609
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
++ MG ++ +Q Q TI P L RD+ + TGSGKTL++ +P ++ LS +
Sbjct: 142 GIKEMGFETMTEIQ----QRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP 197
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + A + G+ +G ++ E +L K
Sbjct: 198 RNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTK-------- 249
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 250 -------------GVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEM 296
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ NE+R + M+ SAT T
Sbjct: 297 RQIIKIL--PNEDRQT-----------------------------------MLFSATQTT 319
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +ICE+ + L L + L+ ++K I
Sbjct: 320 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKII 379
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 380 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 414
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 68/324 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+Q A +I L +D+ + TGSGKT +Y +PI++ L + + +++ PTR+
Sbjct: 139 PIQSA----SIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRE 194
Query: 113 LALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
LALQV + ++ V L++GLAVG ++ + +L RP
Sbjct: 195 LALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP------------------- 235
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
DI++ATPGRL+DHI + F+++ + LV+DE DR+L E +Q L +L L
Sbjct: 236 --DIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQEELTEILSLI------ 287
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
P + ++ SAT+ L QL L P
Sbjct: 288 -------------------------------PKHKRQTLLFSATMNTRIQDLIQLSLQKP 316
Query: 292 LFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 350
+ + + + L+ + ++ LKP L LL+ + + +VF + E+ H+L
Sbjct: 317 VRIMIDPPKQVASKLLQQFVRIRKRDHLKPALLYQLLKGVS-TRVVVFVARKETAHKLRI 375
Query: 351 LLNHFGELRIKIKEYSGLQRQSVR 374
+L G L +K+ E G Q R
Sbjct: 376 VL---GLLGLKVSELHGALSQEQR 396
>gi|149238155|ref|XP_001524954.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032522|sp|A5E2Z9.1|HAS1_LODEL RecName: Full=ATP-dependent RNA helicase HAS1
gi|146451551|gb|EDK45807.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 559
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
+P +K A++ MG + VQ +TI P L RD+ + TGSGKTL++ LP V+ L
Sbjct: 102 EPTMK-AIKEMGFQKMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVELLY 156
Query: 96 NRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ ++ +++ PTR+LALQ+ V + + G+ +G + E ++L K
Sbjct: 157 SLKIKPRNGTAVIIITPTRELALQIFGVARQLMEYHSQTCGIVIGGADRRQEATKLAK-- 214
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++LVATPGRL+DH+ T+GF +L LV+DE DR+L
Sbjct: 215 -------------------GVNLLVATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEI 255
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R + M+
Sbjct: 256 GFEEEMKQIIKIL--PNEDRQT-----------------------------------MLF 278
Query: 273 SATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ E + LE ++C+S + L L + L+
Sbjct: 279 SATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRN 338
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 339 IKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 379
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA+Q+
Sbjct: 9 IQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAVQI 67
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F +I A+G+ +G I + L K+P I+V
Sbjct: 68 AQQFESIGSAMGVRCATIIGGVDIMAQKVALAKKPH---------------------IVV 106
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL DH+ T+GF+L L +LV+DE DRLL + + +L++ + +
Sbjct: 107 ATPGRLNDHLEETKGFSLRSLQFLVLDEADRLLDMDFGPIIDKILKVIPKER-------T 159
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL + L +P+ +
Sbjct: 160 TYL-------------------------------FSATMTTKVAKLQRASLSNPVRIEV- 187
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y L Y L+ K ++L+ L +L + I+FT +V RL +L G
Sbjct: 188 NSKYSTVSTLLQYYLLIPLPQKDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLG 246
>gi|426194090|gb|EKV44022.1| hypothetical protein AGABI2DRAFT_153325 [Agaricus bisporus var.
bisporus H97]
Length = 828
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 97/389 (24%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
+EE +K +M +P P D+ LF P+ G+ F V++ Q
Sbjct: 37 VEEVEKLAMEYVP----PADLKLFAGLPISENT-----------KRGLKKGFFVEMTDIQ 81
Query: 61 -ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDLALQ 116
++I L +D+ + TGSGKTL++ +P+++ L R AV L AL++ PTR+LA+Q
Sbjct: 82 AKSIPVSLKGKDVLGAARTGSGKTLAFLIPVLEALYRRKWGAVDGLGALIISPTRELAVQ 141
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ +V +I S GL +G ++ DE L S ++IL
Sbjct: 142 IFEVLRSIGGYHTFSAGLVIGGKNLKDEKDRL----------------------SRMNIL 179
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+ H++ T GF ++L LV+DE DR+L +Q L +L
Sbjct: 180 VATPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALL-------------- 225
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-- 294
+ LP + +L + SAT TQ N LA+L L P+ +
Sbjct: 226 -SHLPKSRQTL-----------------------LFSATQTQSVNDLARLSLKEPVSIGI 261
Query: 295 -----TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST---- 345
TG+T +P LE + ++ + K L + +++ + K +VF S+ +
Sbjct: 262 SSPGEATGDTY--IPATLEQHYVVSDLDKKLDILWSFIKTHLQCKTLVFMSACKQVRFVY 319
Query: 346 HRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
C + H G I + G Q+QS R
Sbjct: 320 ETFCRM--HPG---IPLIHLHGKQKQSAR 343
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 61/298 (20%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
Q ++ P FE RD+ + TGSGKT ++ LPI+Q L + V+ AL++ PTR+LA Q+
Sbjct: 66 QASVLPEAFEGRDIIGLAETGSGKTGAFCLPILQGLLRKPVKGTAALILTPTRELAFQIL 125
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V + A+G + VG + L + P +++A
Sbjct: 126 QVVQGLGQAMGATAVCVVGGVDRTSQAIALGRNPH---------------------VVIA 164
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ T+GF L + YLV+DE DR+L ++ L +L DN
Sbjct: 165 TPGRLLDHLKDTKGFNLNKVRYLVLDEADRMLSMDFEEELHQIL-----DN--------- 210
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+P +L + SAT+T KL + L P+ +
Sbjct: 211 -MPEQRQTL-----------------------LFSATMTTQVAKLERASLKDPVKVQV-S 245
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+++ P++L L +K K YL L+ + +VF ++ + RL +L + G
Sbjct: 246 TKFQTPKQLLQSYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLG 303
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ ++ L + VG + + L K+P
Sbjct: 189 ELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSIALGKKPH------------------ 230
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+
Sbjct: 231 ---IVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK-------- 279
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
FLP RR + SAT++ L + L P
Sbjct: 280 -------FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDP 309
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L ++ ++ K L L K K +YL+ L + IVFT +V R+ L
Sbjct: 310 LKVSVSSSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 369
Query: 352 LN--HFGEL 358
L FG +
Sbjct: 370 LRTLSFGAI 378
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 148/344 (43%), Gaps = 68/344 (19%)
Query: 15 MRSPVDVSLFEDCP--LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
M SP + S P + +DP L+ A++ +G + +Q E + L RD+
Sbjct: 1 MPSPEEASTSAANPPSFKSIGLIDPLLE-AVEQLGYKTPTDIQA----EALPHALEGRDI 55
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ TGSGKT ++ALPI+Q L N + L A V+ PTR+LA Q+ F A+ +G+
Sbjct: 56 IGVASTGSGKTAAFALPIIQALWNDP-KGLFACVIAPTRELAYQISQQFEALGSGIGVRC 114
Query: 133 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 192
+ +G + + L K+P I+VATPGRL H+ T+G
Sbjct: 115 AVIIGGMDVVSQSIALAKKPH---------------------IIVATPGRLNYHLENTKG 153
Query: 193 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 252
F+L L + V+DE DRLL + + +L++ + +T+L
Sbjct: 154 FSLRGLKFFVLDEADRLLDMDFGPDIDKILKVIPKER-------TTYL------------ 194
Query: 253 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 312
SAT+T KL + L +P+ + ++Y L Y L
Sbjct: 195 -------------------FSATMTTKVAKLQRASLQNPVRVEV-SSKYSTVSTLLQYYL 234
Query: 313 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K ++LV L +L + ++FT +V +L +L G
Sbjct: 235 FMPLSHKEVHLVNLANTLAQNSMMIFTRTVHDAQKLSIILRTLG 278
>gi|45184660|ref|NP_982378.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|74695973|sp|Q75F95.1|DRS1_ASHGO RecName: Full=ATP-dependent RNA helicase DRS1
gi|44980006|gb|AAS50202.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|374105576|gb|AEY94487.1| FAAL164Cp [Ashbya gossypii FDAG1]
Length = 734
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 148/329 (44%), Gaps = 75/329 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L +G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 229 PVLK-GLAALGYTKPSPIQGA----TIPIALLGKDVIAGAVTGSGKTAAFMIPIIERLLY 283
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R LV+ PTR+LA+QV DV + V GL+ GLAVG ++ + L RP
Sbjct: 284 KPAKIASTRVLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRP- 342
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR++DHI + F+++ + LV+DE DR+L +
Sbjct: 343 --------------------DIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDG 382
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L +PS +L + S
Sbjct: 383 FQDELNEIMSL---------------IPSKRQTL-----------------------LFS 404
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
AT+ +L L L P+ + + KL + E +L LKP L LL+ L
Sbjct: 405 ATMNSRIKQLISLSLKKPVRIMIDPPKQAANKLTQ--EFVRLRKREHLKPALLYHLLRKL 462
Query: 331 ---GEEKCIVFTSSVESTHRLCTLLNHFG 356
G+++ +VF + E HRL +L G
Sbjct: 463 DSTGQKRIVVFVARKEVAHRLRVILGLLG 491
>gi|443917623|gb|ELU38297.1| ATP-dependent rRNA helicase RRP3 [Rhizoctonia solani AG-1 IA]
Length = 1028
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 146/341 (42%), Gaps = 69/341 (20%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
+PV D L + P L+ AL+ +G S +Q + I L +D+ +
Sbjct: 86 APVAPKSSASATFDSLGLISPLLE-ALKQVGYSKPTEIQAGI----IPHALEGKDVIGVA 140
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
TGSGKT ++ALPI+Q L + R L A V+ PTR+LA Q+ F A+ A+G+ V
Sbjct: 141 ETGSGKTAAFALPILQKLWDEP-RGLFACVLAPTRELAYQIAQQFEALGSAIGVRCATIV 199
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G D +S+ I K I+VATPGRL DH+ T+GF+L
Sbjct: 200 GG---MDMMSQSIALGKPH-------------------IIVATPGRLNDHLENTKGFSLR 237
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 255
L YLV+DE DRLL + + +L+ L R N TFL
Sbjct: 238 GLRYLVLDEADRLLDMDFGPVIDKILKVLPRERN--------TFL--------------- 274
Query: 256 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 315
SAT++ KL + L +P+ + +Y L Y L+
Sbjct: 275 ----------------FSATMSTKVAKLQRASLQNPVRVEV-NGKYSTVSTLLQYYLLTP 317
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K ++LV L L I+FT +V RL +L + G
Sbjct: 318 FANKDVHLVHLANELAANSIIIFTRTVHDAQRLSMVLRNLG 358
>gi|448532819|ref|XP_003870508.1| Has1 protein [Candida orthopsilosis Co 90-125]
gi|380354863|emb|CCG24379.1| Has1 protein [Candida orthopsilosis]
Length = 573
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 71/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
+P +K A++ MG + VQ +TI P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 116 EPTMK-AIREMGFKKMTKVQA----KTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLY 170
Query: 96 NRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ ++ +++ PTR+LALQ+ V + + G+ +G + E ++L K
Sbjct: 171 SLKIKPRNGTAVIIITPTRELALQIFGVARQLMEHHSQTCGIVIGGADRRQEATKLAK-- 228
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++LVATPGRL+DH+ T+GF +L L++DE DR+L
Sbjct: 229 -------------------GVNLLVATPGRLLDHLKNTQGFVFSNLKALIIDEADRILEI 269
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ NE+R + M+
Sbjct: 270 GFEEEMKQIIKIL--PNEDRQT-----------------------------------MLF 292
Query: 273 SATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ E + LE ++C+S + L L + L+
Sbjct: 293 SATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRN 352
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 353 VKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 393
>gi|254565677|ref|XP_002489949.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|238029745|emb|CAY67668.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|328350360|emb|CCA36760.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 478
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 65/315 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P + A + + + P+Q E+I L RD+ + TGSGKT ++A+P++Q+L
Sbjct: 81 PEILEACEKLKYTKPTPIQA----ESIPYALKGRDIIGLAQTGSGKTAAFAIPVLQSLYE 136
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+A V+ PTR+LA Q+K+ F ++ +GL VG + D+ +L+++P
Sbjct: 137 QATPFF-CCVLAPTRELAYQIKETFDSLGSGMGLRSVCIVGGMDMIDQAKDLMRKPH--- 192
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VATPGRLMDH+ T+GF+L+ L YL++DE DRLL +
Sbjct: 193 ------------------VIVATPGRLMDHLENTKGFSLKALKYLIMDEADRLLDLEFGP 234
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ VL+L + ST+L SAT+
Sbjct: 235 AIDKVLKLIPRER-------STYL-------------------------------FSATM 256
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L P+ ++ ++Y + L ++ K +L+ LL + I
Sbjct: 257 TNKIEKLQRASLVDPIKVSVS-SKYSTVDSLIQSLMVVPDGYKNTFLIYLLNKYQNKSII 315
Query: 337 VFTSSVESTHRLCTL 351
+FT + R L
Sbjct: 316 IFTRTCAHAQRTALL 330
>gi|242219333|ref|XP_002475447.1| predicted protein [Postia placenta Mad-698-R]
gi|220725348|gb|EED79339.1| predicted protein [Postia placenta Mad-698-R]
Length = 806
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 77/331 (23%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP-GLFERDLCIN 75
+P D+ F D P+ L G+ F V + Q P L +D+
Sbjct: 49 APADLKSFADLPVS-----------GLTKRGLKKAFFVDMTDIQAKSLPVSLKGKDVLGA 97
Query: 76 SPTGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ TGSGKTL++ +P+++ L R L AL++ PTR+LA+Q+ DV +I S
Sbjct: 98 ARTGSGKTLAFLVPVLEILYRRKWGPQDGLGALIISPTRELAVQIFDVLRSIGGYHSFSA 157
Query: 133 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 192
GL +G ++ DE L S ++ILVATPGRL+ H++ T G
Sbjct: 158 GLVIGGKNVKDERERL----------------------SRMNILVATPGRLLQHMDQTIG 195
Query: 193 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 252
F ++L LV+DE DR+L +Q L +L + LP A +L
Sbjct: 196 FECDNLQMLVLDEADRILDMGFQRTLSALL---------------SHLPKARQTL----- 235
Query: 253 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--GETRYKLPERLESY 310
+ SAT T + LA+L L P+++ + +P+ LE +
Sbjct: 236 ------------------LFSATQTDSVSDLARLSLKDPVYIGVHDSDNASAMPKSLEQH 277
Query: 311 KLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
++C K L + L+S + K +VF SS
Sbjct: 278 YVLCTLDQKLDLLWSFLKSHLQSKVLVFLSS 308
>gi|242014121|ref|XP_002427746.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212512187|gb|EEB15008.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 821
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 134/288 (46%), Gaps = 40/288 (13%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINS 76
P+ +F + + L +K ++MG++ QV QE P L + +D I S
Sbjct: 246 PIKEDVFSNLKFEDLNLHSYMVKYLKESMGLT-----QVTTVQEKSIPVLLDGKDALIRS 300
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRA-----LVVLPTRDLALQVKDVFAAIAPAVGLS 131
TGSGKTL++ALP++ L + R+ L+VLPTR+LALQ +VF + +
Sbjct: 301 QTGSGKTLAFALPMLHKLQEIRPKITRSDGILSLIVLPTRELALQTYEVFNKLVKSYNWL 360
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 191
V +G K+ +L GI IL+ TPGRL+DHI T+
Sbjct: 361 VPGYLGGGE-----KRKSKKARLRKGIT---------------ILIGTPGRLIDHIQHTK 400
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTI 250
LE + +LV+DE DRLL Y+ + T+L+ L R D D+S P LKT
Sbjct: 401 ALNLEKVSWLVIDEADRLLDMGYEKDVSTLLETLDRHD-----EDSSLLKPDY---LKTD 452
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+ K+ ++LSATL+ KLA L L P F+ +
Sbjct: 453 EEKEEKEKEKEPKRHHRQTILLSATLSPKVQKLAGLSLRDPTFVDASD 500
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 60/300 (20%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
++ ++I L RD+ + TGSGKT ++ALP++Q L + + L LV+ PTR+LA Q
Sbjct: 75 SIQAKSIPVALQGRDVIGLAETGSGKTAAFALPMLQALLEKP-QPLFGLVLAPTRELAAQ 133
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ F A+ + L + VG + + L K+P ++
Sbjct: 134 IGQTFEALGALISLRCAVIVGGLDMVPQAIALGKKPH---------------------VI 172
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 173 VATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPSIDKLLK------------- 219
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
F+P RR + SAT++ L + L P+ ++
Sbjct: 220 --FVPRE-------RRT----------------YLFSATMSSRVESLQRASLRDPVRVSV 254
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y+ L + + K YL+ ++ + CIVFT +V T R+ LL G
Sbjct: 255 SSSKYQTVSTLLQHYVFIPHIRKDTYLIHIINEFAGKSCIVFTRTVYETQRVAILLRTLG 314
>gi|358055869|dbj|GAA98214.1| hypothetical protein E5Q_04897 [Mixia osmundae IAM 14324]
Length = 835
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 63/303 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA--LVVLPTRDLAL 115
+ +TI L +D+ +S TGSGKT+++ L +++ L R + R LV+ PTR+LA+
Sbjct: 294 IQAQTIPVALMGKDIVASSNTGSGKTVAFWLGVLERLLYRDKKDARTRVLVICPTRELAV 353
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
QV V A+A +S L VG S+ + +EL +RP D+
Sbjct: 354 QVHSVGKALARYTDISFCLCVGGLSLKVQEAELRQRP---------------------DV 392
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+V+TPGRL+DH+ T FTL+ L L++DE DR+L E ++ L +
Sbjct: 393 VVSTPGRLIDHVRNTSTFTLDSLEILIIDEADRILEEGFRDELTEI-------------- 438
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
I+ C P R ++ SAT+T+D N+LA+L L P+ +
Sbjct: 439 --------------IKEC---------PRSRQ-SLLFSATITEDVNELARLSLDKPVRIK 474
Query: 296 TGETRYKLPERLESYKLICES--KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
ET + ++ + I + + L+A+ Q + I+F S ++ HR LL
Sbjct: 475 IDETGTTVESLMQEFLRIRKDTPASREAALLAICQRTFRGQTIIFFRSKQAAHRARILLG 534
Query: 354 HFG 356
G
Sbjct: 535 LCG 537
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 136/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q +++I L RD+ + TGSGKT ++ALP++Q L +
Sbjct: 75 ATEALGYKHPTPIQ----EKSIPLALEGRDVIGLAETGSGKTAAFALPVLQALLEKP-SG 129
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A+V+ PTR+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 130 LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAIALGKKPH-------- 181
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +
Sbjct: 182 -------------VVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKI 228
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ F+P ER + SAT++
Sbjct: 229 LK---------------FIPR-------------ERH----------TYLFSATMSSKVE 250
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P ++ Y++ L L LK +Y V L+ S + IVF +
Sbjct: 251 SLQRASLKDPARVSVQSNGYQVVSTLLQNYLFIPHALKDVYCVHLINSFIGQTTIVFLRT 310
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 311 VHDTQRLAILLRTLG 325
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 61/306 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPT 110
F + + +I L +D+ + TGSGKT ++ALP++ L + + + ALV+ PT
Sbjct: 101 FTKPTEIQRRSIPLALQGKDVIGLAETGSGKTAAFALPVLHDLLATKGKKEFFALVLAPT 160
Query: 111 RDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 170
R+LA Q++ F A+ +GL + VG + + L K+P
Sbjct: 161 RELAFQIRQTFNALGSPIGLKSAVLVGGIDMTTQAIALAKKPH----------------- 203
Query: 171 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 230
+L+ATPGRL+DH+ T+GF L+ L YL++DE DR+L Y+ L +L + +
Sbjct: 204 ----VLIATPGRLVDHLENTKGFHLKALRYLIMDEADRMLNMDYEKELDKILAVIPRERR 259
Query: 231 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 290
TFL SAT+T KL + L
Sbjct: 260 -------TFL-------------------------------FSATMTSKVGKLQRASLRD 281
Query: 291 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 350
P+ + ++YK + L + K K YL+ L+ L I+F S+ + +
Sbjct: 282 PVKVEV-NSKYKTVDTLIQRYMFVPQKFKDCYLIYLMNQLRGNSFIIFCSTCNNVMKATL 340
Query: 351 LLNHFG 356
+L G
Sbjct: 341 VLRDLG 346
>gi|50838814|ref|NP_001002869.1| probable ATP-dependent RNA helicase DDX27 [Danio rerio]
gi|49618925|gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
Length = 776
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 70/359 (19%)
Query: 20 DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTG 79
D S +++ H L L A+ MG P+Q A + GL +D+C + TG
Sbjct: 193 DASQYDENLTFHDMNLSRPLLKAISTMGFKQPTPIQKAC----VPVGLLGKDICACAATG 248
Query: 80 SGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
+GKT ++ LP+++ L R + R LV++PTR+L +QV V +A +S LAVG
Sbjct: 249 TGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVG 308
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 197
+ + EA + P D+L+ATPGRL+DH++ T F L
Sbjct: 309 GLDLKSQ----------EAALRAGP-----------DVLIATPGRLIDHLHNTPSFELSQ 347
Query: 198 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
+ L++DE DR+L E ++ + + IR C +R
Sbjct: 348 IEILILDEADRMLDEYFEEQMKEI----------------------------IRMCAYQR 379
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 317
M+ SAT++++ LA + L P+ + P + + I +K
Sbjct: 380 QT----------MLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNK 429
Query: 318 L--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + ALL ++ ++FT + + HR+ LL G +K+ E G Q+ R
Sbjct: 430 EGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMG---LKVGELHGNLSQTQR 485
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 65/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A Q+MG + P+Q+A I L RD+ + TGSGKT ++ +P++ L
Sbjct: 52 PELCKACQSMGWQAPTPIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLE 107
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
R + +V+ P+R+L Q+ + F A++ ++ L V + +G + + S L KRP
Sbjct: 108 DVQR-IYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPH--- 163
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
++VA+PGRL DH+ T+GF+L + LV+DE DRLL + +
Sbjct: 164 ------------------VIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDE 205
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L ++ ++ + TFL SAT+
Sbjct: 206 ELDKIIHAMPTERQ-------TFL-------------------------------FSATM 227
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T+ +KL ++ L P+ + + +Y E L+ L+ K K YL ALL I
Sbjct: 228 TKKLSKLQKMALKDPISVQVDD-KYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAI 286
Query: 337 VFTSSVESTHRLCTLLN 353
VF + + R L
Sbjct: 287 VFCKTCDGAQRCAAYLK 303
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 145/321 (45%), Gaps = 72/321 (22%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L+++ I++ PVQV + D+ + TG+GKTL++ LPI+ L+ +
Sbjct: 59 LRHLAINTPTPVQVNCIPHILAGS----DVLGCAKTGTGKTLAFGLPILHELALDPYG-I 113
Query: 103 RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
AL++ PTR+LA+Q+ D FAA+ ++GL +G+ VG + S+L +RP
Sbjct: 114 CALILTPTRELAMQIGDQFAALGTSIGLKIGIIVGGKDRVAQSSDLARRPH--------- 164
Query: 163 EDVLQELQSAVDILVATPGRLMDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
I+VATPGRL DH+ + G E L +LV+DE DRLL Y L
Sbjct: 165 ------------IIVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRLLDGQYSVELK 212
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
T+L TFLP +L + SAT+T
Sbjct: 213 TIL---------------TFLPKQRQTL-----------------------LFSATITSA 234
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----C 335
++L Q+ + P F ++ ++LE ++C +K YLV ++++ E+
Sbjct: 235 LSQLHQVSVKKPYFFED-KSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLI 293
Query: 336 IVFTSSVESTHRLCTLLNHFG 356
++F+ + L + + G
Sbjct: 294 LIFSHTCRECQALAIMFHGLG 314
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 132/300 (44%), Gaps = 63/300 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E+I L +RD+ + TGSGKT ++ALP++Q+L N + V+ PTR+LA Q+
Sbjct: 98 IQAESIPYALEDRDIIGLAQTGSGKTAAFALPVLQSLWNDP-KPFFCCVLAPTRELAYQI 156
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ +G+ + VG + + L KRP I+V
Sbjct: 157 SQQFDALGSTIGVKTAVIVGGIDMMSQAIALSKRPH---------------------IIV 195
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL DH+ T+GF+L +L YL++DE DRLL + + +L++
Sbjct: 196 ATPGRLHDHLENTKGFSLRNLKYLIMDEADRLLDMDFGPVIDKILKVI------------ 243
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTT 296
PR + L SAT+T KL + L P+ +
Sbjct: 244 ---------------------------PRERRTYLFSATMTTKVAKLQRASLVSPVKVQM 276
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
T+Y + L + K K YLV L+ L + I+FT +V +RL +L G
Sbjct: 277 S-TKYDTVDGLVQLYMFFPFKNKDAYLVYLVNELSGKSMIIFTRTVYDANRLSIILRLLG 335
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 153/361 (42%), Gaps = 72/361 (19%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCP-LDHLPC-----LDPRLKVALQNMGISSLFPVQ 55
+E+ S P P+ RSP D P H + P L A +MG +Q
Sbjct: 7 QESATMSQPGSPF-RSPSPAPSNPDAPEASHNKTFADLGISPELCRACASMGFKKPSDIQ 65
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
E I L +D+ + TGSGKT +++LPI+QTL + ALV+ PTR+LA
Sbjct: 66 A----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENP-QPFFALVLAPTRELAY 120
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ ++ +G+ + VG + + L KRP +
Sbjct: 121 QISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH---------------------V 159
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL + + VL++ +
Sbjct: 160 IVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVLKVIPKER------ 213
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
+T+L SAT+T KL + L+ P+ +
Sbjct: 214 -NTYL-------------------------------FSATMTTKVAKLQRASLNKPVRVE 241
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++Y L + L+ K K YL+ L L I+FT +V + RL +L
Sbjct: 242 V-SSKYSTVSTLLQHYLLLPLKNKDAYLLYLANELSSSSMIIFTRTVADSQRLSIILRRL 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 135/315 (42%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L + +
Sbjct: 85 ACDKMGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP-QS 139
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ ++ + + VG + + L K+P
Sbjct: 140 FFGLVLAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKPH-------- 191
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +
Sbjct: 192 -------------IIVATPGRLLDHLENTKGFSLRSLKFLVMDEADRLLDMDFGPILDKI 238
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SATL+
Sbjct: 239 LKVL--PRERR-----TFL-------------------------------FSATLSSKVE 260
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P ++ ++Y E L+ L+ K K +YLV LL + I+F +
Sbjct: 261 SLQRASLSNPARVSISSSKYATVETLQQTYLLRPYKHKDIYLVYLLHEFIGQSVIIFMRT 320
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 321 VHETQRVAFLLRGLG 335
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ + P+Q + I L RD+ + TGSGKT ++ LPI+Q+L + +
Sbjct: 101 ACENLKFKNPTPIQT----QAIPLALEGRDVIGLAETGSGKTAAFVLPILQSLLEKP-QP 155
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ A+ + + VG + + L KRP
Sbjct: 156 LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPH-------- 207
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L+HL Y+V+DE DRLL + L +
Sbjct: 208 -------------IVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKI 254
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + + + SAT++
Sbjct: 255 LKVLPREGRHTY-------------------------------------LFSATMSSKVE 277
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P+ ++ + +++ L K K LYLV LL I+FT +
Sbjct: 278 SLQRAALQNPVRVSISSSSHQVVSTLLQRYAFIPHKYKDLYLVHLLNDNIGHPTIIFTRT 337
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 338 VNETQRIAVLLRALG 352
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALEGRDIIGLAETGSGKTGAFALPILNALLETPQRFF-ALVLTPTRE 104
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 105 LAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKP-------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L+L D +
Sbjct: 145 -HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-- 201
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 202 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 225
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 226 KCAVS-SKYQTVEKLQQYYLFIPSKFKNKRLGSLNKFKAKARSILLATDVAS 276
>gi|296804908|ref|XP_002843302.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
gi|238845904|gb|EEQ35566.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
Length = 578
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 148/334 (44%), Gaps = 74/334 (22%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +P +K A+ MG +++ +Q Q I P L RD+ + TGSGKTL++ +P V
Sbjct: 97 LSLSEPTVK-AIAGMGFTTMTEIQ----QRGIPPSLAGRDILGAAKTGSGKTLAFLIPAV 151
Query: 92 QTLSNRAVR---------CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
+ L + + AL++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 152 EILRSLKFKPRNGMIFQLGTGALIITPTRELALQIFGVARELMEHHSQTYGVVIGGAN-- 209
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+R + E +L V++L+ TPGRL+DH+ +T GF ++L LV
Sbjct: 210 -------RRAEAE------------KLNKGVNVLIGTPGRLLDHLRSTEGFVFKNLKTLV 250
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DR+L ++ L ++ + D+
Sbjct: 251 IDEADRILEVGFEDELRQIISILPKDDRQ------------------------------- 279
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKP 320
M+ SAT T LA++ L PL++ + + + +E +ICE+ +
Sbjct: 280 ------TMLFSATQTTKVEDLARISLKPGPLYINVDHKKEHSTVDGVEQGFIICEAHKRF 333
Query: 321 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
L L + L+ ++K IVF SS S LLN+
Sbjct: 334 LLLFSFLKKNAKKKIIVFFSSCNSVKYYSELLNY 367
>gi|255947238|ref|XP_002564386.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591403|emb|CAP97631.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 154/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
+ +MG +++ +Q Q T+ P L RD+ + TGSGKTL++ LP ++ L +
Sbjct: 133 GINDMGFTTMTEIQ----QRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP 188
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 189 RNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLMK-------- 240
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++LVATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 241 -------------GVNLLVATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEI 287
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ LPS ER M+ SAT T
Sbjct: 288 RQIVKI---------------LPSE------------ER----------QTMLFSATQTT 310
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ ++ + LE ++CE+ + L L + L+ ++K I
Sbjct: 311 KVEDLARISLRPGPLYINVDHSKEHSTVAGLEQGYVVCEADKRFLLLFSFLKRNLKKKII 370
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 371 VFFSSCSCVKYHAELLNY---IDLPVLELHGKQKQQKR 405
>gi|242007312|ref|XP_002424485.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212507903|gb|EEB11747.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 669
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 71/338 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---A 98
A+ M S P+Q A I L RD+C + TG+GKT +Y LPI++ L + +
Sbjct: 169 AIAAMNFSHPTPIQCAA----IPVALLGRDICGCAATGTGKTAAYMLPILERLLYKPQGS 224
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+ R LV++PTR+L +QV V ++ + +GLAVG + + + L K+P
Sbjct: 225 LSITRVLVLVPTRELGVQVIQVAKQLSKFTTIEIGLAVGGLDVKVQEAFLRKQP------ 278
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
DI++ATPGRL+DH+ + GF+L+ + LV+DE DR+L E + +
Sbjct: 279 ---------------DIVIATPGRLIDHLKNSLGFSLDSIEILVLDEADRMLDEYFAEQM 323
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+ +R+C R M+ SAT+T
Sbjct: 324 KEI----------------------------VRQCSRTRQ----------TMLFSATMTT 345
Query: 279 DPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCI 336
LA + L +P+ + + + + I + + K L AL++ CI
Sbjct: 346 AVEDLASVSLSNPVKIFVDSNQSVTNNLRQEFIRIRKGREGDKEAVLAALVRRTFRANCI 405
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+F ++ H+L LL G L +K E G RQ R
Sbjct: 406 IFVATKSQAHKLRILL---GFLNMKAGELHGNLRQPER 440
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 136/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q +++I L RD+ + TGSGKT ++ALP++Q L +
Sbjct: 75 ATEALGYKHPTPIQ----EKSIPLALAGRDVIGLAETGSGKTAAFALPVLQALLEKP-SG 129
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A+V+ PTR+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 130 LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAIALGKKPH-------- 181
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +
Sbjct: 182 -------------VVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKI 228
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ F+P ER + SAT++
Sbjct: 229 LK---------------FIPR-------------ERH----------TYLFSATMSSKVE 250
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P ++ Y++ L L LK +Y V L+ S + IVF +
Sbjct: 251 SLQRASLKDPARVSVQSNGYQVVSTLLQNFLFIPHALKDVYCVHLINSFIGQTTIVFLRT 310
Query: 342 VESTHRLCTLLNHFG 356
V T RL LL G
Sbjct: 311 VHDTQRLAILLRTLG 325
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 91 IQEKSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 149
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ + L + VG + + L K+P I+V
Sbjct: 150 GQAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPH---------------------IIV 188
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YL++DE DRLL + + +L+
Sbjct: 189 ATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILK-------------- 234
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SATL+ L + L P+ ++
Sbjct: 235 -FIPRE-------RRT----------------YLFSATLSSKIESLQRASLRDPVRVSIS 270
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L + + K YLV L+ + IVFT +V T R+ LL G
Sbjct: 271 SNKYQTVSTLIQHYMFIPFPQKDTYLVYLVNEHTGKSTIVFTRTVWETQRVAILLRTLG 329
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 61/300 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLALQ 116
+ E I L +D+ + TGSGKT ++ALPI+ L + A V+ PTR+LA+Q
Sbjct: 35 IQTEAIPLALEGKDVIGLAQTGSGKTGAFALPILHALLEAPRPKDFFACVLSPTRELAIQ 94
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ + F A+ +G+ + VG + + ++ K+P I+
Sbjct: 95 IAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP---------------------HII 133
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V TPGR++DH+ T+GF+L L YLV+DE DRLL E ++ L +LQ+ +
Sbjct: 134 VGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRLLNEDFEESLNEILQMIPRERR------ 187
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
TFL SAT+T+ KL ++ L +P+ +
Sbjct: 188 -TFL-------------------------------FSATMTKKVQKLQRVCLRNPVKIEA 215
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ +K K YLV +L + +VFT + ++T L +L + G
Sbjct: 216 -SSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLG 274
>gi|348569356|ref|XP_003470464.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Cavia porcellus]
Length = 406
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 103 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 143
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 144 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 199
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 200 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 223
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 224 KCAVS-SKYQTVEKLQQYYLFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 274
>gi|301765214|ref|XP_002918023.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Ailuropoda melanoleuca]
Length = 406
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|313235774|emb|CBY11224.1| unnamed protein product [Oikopleura dioica]
Length = 658
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 67/292 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR--AVRCLRALVVLPTRDLA 114
+ Q+TI L D+ + TGSGKTL + +P+++ L SNR + + LV+ PTR+L+
Sbjct: 88 IQQQTIMLALQGNDILAAAKTGSGKTLGFLIPLLEILWSNRWTQIDGVGGLVLSPTRELS 147
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
+Q+ DV I S GL G S+ +E + S +
Sbjct: 148 MQIYDVLRKIGLKHDFSAGLVTGGKSVEEEAKVI----------------------SKTN 185
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I++ATPGRL H++ T GFTL++L V+DE DR+L +QA + ++
Sbjct: 186 IIIATPGRLCQHLDQTHGFTLDNLKAFVIDEADRMLDMGFQAQVDQII------------ 233
Query: 235 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 294
+FLPS IR+ M+ SATL +KL++L L P ++
Sbjct: 234 ---SFLPS-------IRQT----------------MLFSATLGTQTSKLSRLSLKDPKYV 267
Query: 295 TTGE-TRYKLPERLESYKLICESKLKPLYLVALLQSL---GEEKCIVFTSSV 342
++ P+ L I + K +L + ++++ G K +VF +++
Sbjct: 268 NVNSGSKSATPKNLNQTYCIVNQEDKLNFLFSFMKNVAIKGTTKTVVFFATL 319
>gi|403418786|emb|CCM05486.1| predicted protein [Fibroporia radiculosa]
Length = 568
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 77/331 (23%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVA-VWQETIGPGLFERDLCIN 75
+P D+ LF D P+ G+ F V++ + +++ L +D+
Sbjct: 49 APPDLKLFADLPISDA-----------TKRGLKKAFFVKMTDIQAKSLSISLKGKDVLGA 97
Query: 76 SPTGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ TGSGKTL++ +P+++ L R L AL++ PTR+LA+Q+ DV +I S
Sbjct: 98 ARTGSGKTLAFLIPVLEMLYRRKWGPQDGLGALIISPTRELAVQIFDVLRSIGGYHSFSA 157
Query: 133 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 192
GL +G ++ DE +E S ++ILVATPGRL+ H++ T G
Sbjct: 158 GLVIGGKNLNDE----------------------RERLSRMNILVATPGRLLQHMDQTIG 195
Query: 193 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 252
F ++L LV+DE DR+L +Q L +L + LP + +L
Sbjct: 196 FECDNLQMLVLDEADRILDMGFQRTLSALL---------------SHLPKSRQTL----- 235
Query: 253 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE--TRYKLPERLESY 310
+ SAT T + LA+L L P+++ E + P+ LE +
Sbjct: 236 ------------------LFSATQTNSVSDLARLSLKDPVYVGVQELDSAGATPKSLEQH 277
Query: 311 KLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
++CE K L + +++ + K +VF SS
Sbjct: 278 YVVCELDKKLDILWSFIKAHLQNKVLVFLSS 308
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 73/337 (21%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V+LF++ L P + A++ + S+ P+Q +++ L RD+ + TGS
Sbjct: 66 VTLFKEL------GLQPDILDAIEKLNFSTPTPIQA----QSLPHSLQGRDIIGIAQTGS 115
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKT ++A+PI+Q L A A V+ PTR+LA Q+++ F A+ +GL VG
Sbjct: 116 GKTAAFAIPILQALWE-AQTPYFACVLAPTRELAYQIRETFDALGVNMGLRCSTIVGGMD 174
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
+ ++ EL+++P ++VATPGRLMDH+ T+GF+L+ L Y
Sbjct: 175 MMEQAKELMRKPH---------------------VIVATPGRLMDHLENTKGFSLKALKY 213
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DRLL + L +L +
Sbjct: 214 LVMDEADRLLDMEFGPVLDRILNII----------------------------------- 238
Query: 261 DKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 319
PR K L SATLT KL + L P+ + + +Y + L ++ K
Sbjct: 239 ----PRERKTYLFSATLTSKVEKLQRASLIDPVKIAVND-KYSTVDTLIQTLMVVPDGYK 293
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
YL+ LL + IVF + ++ L G
Sbjct: 294 NTYLIYLLNEYVGKSVIVFARTCAHAQKVALLARILG 330
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 65/304 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 23 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QV 77
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A V+ PTR+LA+Q+ + F A+ +GL + VG + L KRP
Sbjct: 78 LFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKRP--------- 128
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+V T G LMDH++ T+GF+L + YLV+DE DRLL + ++ + +
Sbjct: 129 ------------HIVVGTLGXLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEI 176
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L + +P ER K Y + SAT+T+
Sbjct: 177 L---------------SVIPQ-------------ER----KTY------LFSATMTKKVR 198
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
KL + L +P+ + G ++Y + L+ +K K YLV +L L +VFT +
Sbjct: 199 KLQRACLRNPVKIEAG-SKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRT 257
Query: 342 VEST 345
++T
Sbjct: 258 CDAT 261
>gi|123504635|ref|XP_001328793.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121911741|gb|EAY16570.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 515
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 75/343 (21%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P DV FE+ L H + AL M F + V +TI L RD+C ++
Sbjct: 12 PNDVESFEELGLSH------SIIRALHKMN----FEIPTPVQNKTIPIALQGRDVCASAV 61
Query: 78 TGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLA 135
TGSGKT ++ +P V+ L S RA+++ PTR+LA Q V + I L+ L
Sbjct: 62 TGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLL 121
Query: 136 VGQSS-IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
G SS + +E L++ P D LV TPGR++DHI GFT
Sbjct: 122 TGGSSNVKEEEERLLEYP---------------------DFLVCTPGRIIDHIKNCEGFT 160
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
LE++ LV+DE+DRLL+E + + + V
Sbjct: 161 LENVLVLVLDESDRLLQEGFYSQIEEV--------------------------------- 187
Query: 255 VERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 313
K P + +L +AT+ ++LA++ L P+ + + +K+ + L +
Sbjct: 188 ------HKSLPETTQSILVTATMNSSVSRLAEMSLKKPVRIDLDDV-FKVAKGLTQEFIR 240
Query: 314 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
C + + LVA L +K ++F ++ + H L L G
Sbjct: 241 CTKETRDATLVACCSRLCTKKTLIFGNTKKIVHNLYLLFKALG 283
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 154/336 (45%), Gaps = 71/336 (21%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+S+L F V + +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 273 GLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTR 332
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 163
L++ PTR+LA+Q V IA + V L +G S+ + EL KRP
Sbjct: 333 VLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRP----------- 381
Query: 164 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
DI++ATPGR +DH+ ++GFT+E++ +V+DE DR+L + + L ++Q
Sbjct: 382 ----------DIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQ 431
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 283
C P R M+ SAT+T + L
Sbjct: 432 A----------------------------C---------PKSRQT-MLFSATMTDKVDDL 453
Query: 284 AQLDLHHP--LFLTTGETRYKLPERLESYKLICESK-LKPLYLVALLQSLGEEKCIVFTS 340
+L L+ P +F+ +T KL + E ++ + + L+P L+ L + L + I+F
Sbjct: 454 IRLSLNRPVRVFVDNKKTTAKLLTQ-EFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFR 512
Query: 341 SVESTHRLCTLLNHFGELRIKIKEYSG--LQRQSVR 374
S H++ + FG L + E G Q Q VR
Sbjct: 513 SKAFAHKMRVI---FGLLSLNATEIHGSLSQEQRVR 545
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q + I P L +D+ + TGSGKT ++ALPI+ L +
Sbjct: 90 PELLQACKNLNFTKPTPIQA----KAIPPALEGKDIIGLAQTGSGKTAAFALPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G VG ++ D+ +L+++P
Sbjct: 146 DQ-SPYYACILSPTRELAQQIKETFDSLGTIMGARTTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQGRTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L P+ +Y+ + L ++ LK +L+ LL + I
Sbjct: 267 TSKIDKLQRASLTDPVKCAV-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTTI 325
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + R+ L N
Sbjct: 326 IFTRTKANAERISGLCN 342
>gi|84997461|ref|XP_953452.1| DEAD-box family ATP-dependent helicase [Theileria annulata strain
Ankara]
gi|65304448|emb|CAI76827.1| DEAD-box family ATP-dependent helicase, putative [Theileria
annulata]
Length = 535
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 71/363 (19%)
Query: 15 MRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
M + DV F D +P LK +N I + + + I P L +D+
Sbjct: 59 MNNNGDV-YFSDSLFSDFEISEPILKALTENNFIKT-----TEIQAKCIPPLLQGKDVLG 112
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAV---RCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 131
+ TGSGKTL++ +P+ + L L++ PTR+L+LQ+ +V I + +
Sbjct: 113 KAKTGSGKTLAFLIPMAEVLYQVKFMPRNGTGGLIISPTRELSLQIFEVGKEICKYLPQT 172
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 191
+GL +G ++ E +L+K V+IL+ATPGRL+DH+ T+
Sbjct: 173 LGLVMGGANRKQEEFKLVK---------------------GVNILIATPGRLLDHMQNTK 211
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
GF ++L V+DE DR+L+ ++ + +++L
Sbjct: 212 GFVYKNLMVFVIDEADRILQIGFEQEMNQIIKLL-------------------------- 245
Query: 252 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 311
P R + SAT T + + LA+L L P+FL LE
Sbjct: 246 -----------PKNRQTSL-FSATHTSNVDDLARLSLKSPIFLQVSGMENATVSGLEQGY 293
Query: 312 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 371
++CE++ + + L L+ ++K +VF SS S LLN+ + I +K G ++Q
Sbjct: 294 VVCEAENRFMLLYTFLKKNLDKKIMVFFSSCNSVKFHDELLNY---VDIPVKCIHGKKKQ 350
Query: 372 SVR 374
+ R
Sbjct: 351 TNR 353
>gi|330926789|ref|XP_003301614.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
gi|311323488|gb|EFQ90287.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
Length = 1053
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 68/325 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L R + A+ MG ++ +Q Q+ I P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 581 LSERTRQAIDGMGFKTMTEIQ----QKAIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEML 636
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S + +VV PTR+LALQ+ V + + G+ +G ++ + E
Sbjct: 637 SQLRFKPRNGTGVIVVSPTRELALQIFGVARELMEHHSQTFGICIGGANRSAEA------ 690
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
++L+ V++L+ATPGRL+DH++ T+GF ++L LV+DE DR+L
Sbjct: 691 ---------------EKLRKGVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILE 735
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + +++++ L T R+ M+
Sbjct: 736 VGFEDEMRSIIKI----------------------LPTERQT----------------ML 757
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + + LE ++C+S + L + L+
Sbjct: 758 FSATQTTKVEDLARISLKAGPLYINVDHRAEHSTVQGLEQGYVLCDSDTRFRLLFSFLKK 817
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNH 354
++K IVF SS S LLN+
Sbjct: 818 HQKKKVIVFLSSCASVDFYSELLNY 842
>gi|149713748|ref|XP_001501504.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Equus caballus]
Length = 406
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|426371743|ref|XP_004052801.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Gorilla gorilla gorilla]
Length = 406
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 136/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ + P+Q + I L RD+ + TGSGKT ++ LPI+Q+L + +
Sbjct: 100 ACENLKFKNPTPIQT----QAIPLALEGRDVIGLAETGSGKTAAFVLPILQSLLEKP-QP 154
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ A+ + + VG + + L KRP
Sbjct: 155 LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPH-------- 206
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L+HL Y+V+DE DRLL + L +
Sbjct: 207 -------------IVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKI 253
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + + + SAT++
Sbjct: 254 LKVLPREGRHTY-------------------------------------LFSATMSSKVE 276
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P+ ++ + +++ L K K LYL+ LL I+FT +
Sbjct: 277 NLQRAALQNPVRVSISSSSHQVVSTLLQRYAFIPHKYKDLYLIHLLNDNIGHPTIIFTRT 336
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 337 VNETQRIAVLLRALG 351
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEQSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ + L + VG + + L K+P I+V
Sbjct: 145 GQAFEALGSLISLRCAVIVGGLDMVPQSIALGKKPH---------------------IIV 183
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YL++DE DRLL + + +L+
Sbjct: 184 ATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILK-------------- 229
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SAT++ L + L P+ ++
Sbjct: 230 -FVPRE-------RRT----------------YLFSATISSKIESLQRASLRDPVKVSIS 265
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L + L K ++L+ L+ + IVFT +V T R+ LL G
Sbjct: 266 SNKYQTVSTLLQHYLFIPHPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLG 324
>gi|323301250|gb|ADX35967.1| LD47310p [Drosophila melanogaster]
Length = 990
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 54/249 (21%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R R ALV++PT
Sbjct: 367 TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPT 426
Query: 111 RDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+L +Q ++ + P + G +G S E + L K
Sbjct: 427 RELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRK------------------- 467
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL+ TPGRL+DH+ T F L L +L++DE DRLL Y+ V QL + +
Sbjct: 468 --GINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYER---DVKQLVEAID 522
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R C +DK P+L +M+LSATLT +LA L L
Sbjct: 523 KQRAE------------------C------EDKELPQLQRMLLSATLTSQVQQLAGLTLK 558
Query: 290 HPLFLTTGE 298
+PL++ +
Sbjct: 559 NPLYIDNSD 567
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 128/305 (41%), Gaps = 61/305 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + + I L RD+ + TGSGKT ++++PI+Q L + R L A ++ PTR
Sbjct: 45 FSAPTDIQAQAIPHALQGRDVIGLAQTGSGKTAAFSIPILQGLWDDP-RPLFACILAPTR 103
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+L+ Q+ A+ +G+ VG + + L KRP
Sbjct: 104 ELSYQISQQIEALGATIGVRCATIVGGMDMMTQSIALSKRPH------------------ 145
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
++VATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 146 ---VIVATPGRLQDHLENTKGFSLRSLRYLVMDEADRLLDLDFGPIIDKLLQ-------- 194
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
++ RR M+ SAT+T KL + L +P
Sbjct: 195 --------------NIPKERRT----------------MLFSATMTTKVAKLQRASLRNP 224
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ + G T+Y L+ Y L K YLV L IVFT +V RL L
Sbjct: 225 VRIEIG-TKYSTVSTLQQYYLFMPFAHKDTYLVHLANEQVGHSIIVFTRTVHDAQRLAVL 283
Query: 352 LNHFG 356
L G
Sbjct: 284 LRLLG 288
>gi|402221225|gb|EJU01294.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 813
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 75/330 (22%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
P LF PL LP + AL+ ++ +Q Q T L RD+ +
Sbjct: 51 DPSTAELFAGLPL-SLPT-----QRALRAASYTTPTTIQARTLQHT----LRGRDVLGAA 100
Query: 77 PTGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
TGSGKTL++ LP+++ L L AL++ PTR+LA+Q+ +V ++ S G
Sbjct: 101 RTGSGKTLAFLLPVLELLWRSKWGPQDGLGALIISPTRELAMQIFEVLRSVGQYHSFSAG 160
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
L +G ++ DE QE + ++ILVATPGRL+ H++ T GF
Sbjct: 161 LVIGGKNVRDE----------------------QERLTRMNILVATPGRLLQHMDQTAGF 198
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
++L LV+DE DR+L + + ++ +L R+
Sbjct: 199 ATDNLQILVLDEADRILDMGFSHTINAII----------------------ANLPKTRQT 236
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL--PERLESYK 311
++ SAT TQ LA+L L P F++ E +L P+ LE +
Sbjct: 237 ----------------LLFSATQTQSVKDLARLSLKDPEFVSVREAGQELATPKNLEQHY 280
Query: 312 LICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L+CE K L + +++ + K +VF SS
Sbjct: 281 LVCELDKKLDVLYSFIKAHLKSKALVFLSS 310
>gi|213409972|ref|XP_002175756.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
gi|212003803|gb|EEB09463.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
Length = 572
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 157/357 (43%), Gaps = 76/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LF D PL + A++++G + VQ TI P L RD+ + TGSGK
Sbjct: 84 LFTDLPLSE------KTLNAIKDIGYEKMTEVQA----RTIPPLLAGRDVLGAAKTGSGK 133
Query: 83 TLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++TL + + ++V PTR+LALQ+ V + + G+ +G +
Sbjct: 134 TLAFLIPAIETLYSLKFKPRNGTGVIIVSPTRELALQIFGVAKELLKYHHQTFGIVIGGA 193
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
+ E +L+K V++LVATPGRL+DH+ T+GF +L
Sbjct: 194 NRRAEADKLVK---------------------GVNLLVATPGRLLDHLQNTKGFVFRNLR 232
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
L++DE DR+L ++ + + ++ S+N
Sbjct: 233 SLIIDEADRILEIGFEDEMRQIAKVLPSENRQ---------------------------- 264
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ + + LE ++ ES
Sbjct: 265 ---------TMLFSATQTTKVEDLARISLRPGPLYINVDAGKDTSTADGLEQGYVVVESD 315
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S + LLN+ + + + + G Q+Q R
Sbjct: 316 KRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNY---IDLPVLDLHGKQKQQRR 369
>gi|18859659|ref|NP_573214.1| CG8611, isoform A [Drosophila melanogaster]
gi|5052508|gb|AAD38584.1|AF145609_1 BcDNA.GH02833 [Drosophila melanogaster]
gi|22832445|gb|AAF48727.2| CG8611, isoform A [Drosophila melanogaster]
Length = 974
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 54/249 (21%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R R ALV++PT
Sbjct: 351 TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPT 410
Query: 111 RDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+L +Q ++ + P + G +G S E + L K
Sbjct: 411 RELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRK------------------- 451
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL+ TPGRL+DH+ T F L L +L++DE DRLL Y+ V QL + +
Sbjct: 452 --GINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYER---DVKQLVEAID 506
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R C +DK P+L +M+LSATLT +LA L L
Sbjct: 507 KQRAE------------------C------EDKELPQLQRMLLSATLTSQVQQLAGLTLK 542
Query: 290 HPLFLTTGE 298
+PL++ +
Sbjct: 543 NPLYIDNSD 551
>gi|426392064|ref|XP_004062380.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Gorilla
gorilla gorilla]
Length = 575
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 70/342 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LKVA+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 6 PLLKVAITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 61
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
R R LV++PTR+L +QV V +A ++ LAVG + +
Sbjct: 62 KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQ---------- 111
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
EA L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 112 EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 160
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + + IR C R M+ SA
Sbjct: 161 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 182
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 332
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 183 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFT 242
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ ++FT + + HR+ LL G +++ E G Q+ R
Sbjct: 243 DHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQR 281
>gi|28571338|ref|NP_788922.1| CG8611, isoform B [Drosophila melanogaster]
gi|74860578|sp|Q86B47.1|Y8611_DROME RecName: Full=Probable ATP-dependent RNA helicase CG8611
gi|28381641|gb|AAO41693.1| CG8611, isoform B [Drosophila melanogaster]
Length = 975
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 54/249 (21%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R R ALV++PT
Sbjct: 352 TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPT 411
Query: 111 RDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+L +Q ++ + P + G +G S E + L K
Sbjct: 412 RELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRK------------------- 452
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL+ TPGRL+DH+ T F L L +L++DE DRLL Y+ V QL + +
Sbjct: 453 --GINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYER---DVKQLVEAID 507
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R C +DK P+L +M+LSATLT +LA L L
Sbjct: 508 KQRAE------------------C------EDKELPQLQRMLLSATLTSQVQQLAGLTLK 543
Query: 290 HPLFLTTGE 298
+PL++ +
Sbjct: 544 NPLYIDNSD 552
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 138/317 (43%), Gaps = 64/317 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ P+Q I P L +D+ + TGSGKT ++A+PI+ L
Sbjct: 95 PELVEACKNLNYEKPTPIQ----SRAIPPALEGKDIIGLAQTGSGKTAAFAIPILNKLWE 150
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 151 DQ-QPYYACIMAPTRELAQQIKEQFDSLGALMGVRSVCIVGGMNMMDQARDLMRKPH--- 206
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ TRGF+L L +LV+DE DRLL +
Sbjct: 207 ------------------IIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDLEFGP 248
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 249 VLDRILKIL-------------------------------------PTQGRTTYLFSATM 271
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ L+ + I
Sbjct: 272 TSKIDKLQRASLTNPVKCAV-SNKYQTVDTLIQTLMVVPGGLKNTYLIYLINEFVGKSII 330
Query: 337 VFTSSVESTHRLCTLLN 353
+FT + + RL L N
Sbjct: 331 IFTRTKANAERLSLLSN 347
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 62/298 (20%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
QE P L + +D+ + TGSGKT +++LPI+Q L R AL++ PTR+LA+Q+
Sbjct: 26 QEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQALMERPQEHF-ALILSPTRELAIQIA 84
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ A+ +G+ + VG + + L KRP ILV
Sbjct: 85 EQVEALGSGIGVKCAVLVGGIDMMAQAIALAKRPH---------------------ILVG 123
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGR++DH++ T+GF L+ L +LV+DE D+LL ++ + +L++ D +
Sbjct: 124 TPGRVVDHLSNTKGFNLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRDRRTQ------ 177
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+ SAT+T KL + L P+ +
Sbjct: 178 --------------------------------LFSATMTNKVQKLQRACLVRPVKVEVA- 204
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y E L + +K K YL +L L ++FT + EST R+ +L + G
Sbjct: 205 AKYSTVETLRQQYVFIPAKYKDCYLAYVLNELSGSTFMIFTRTCESTRRIALMLRNLG 262
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 136/315 (43%), Gaps = 64/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L + +
Sbjct: 86 ACDKMGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP-QP 140
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
LV+ PTR+LA Q+ ++ + + VG + + L K+P
Sbjct: 141 FFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKPH-------- 192
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L +L +LV+DE DRLL + L +
Sbjct: 193 -------------IIVATPGRLLDHLENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKI 239
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ E R TFL SATL+
Sbjct: 240 LKVL--PRERR-----TFL-------------------------------FSATLSSKVE 261
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P ++ ++Y E L+ ++ K K +YLV LL + I+F +
Sbjct: 262 SLQRASLSNPARVSISSSKYATVETLQQTYILRPYKHKDIYLVYLLHEFIGQSVIIFMRT 321
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 322 VHETQRVAFLLRGLG 336
>gi|296210932|ref|XP_002752173.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Callithrix jacchus]
Length = 406
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|73997169|ref|XP_866840.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Canis lupus familiaris]
Length = 407
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|402885240|ref|XP_003906072.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Papio anubis]
Length = 406
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEKSIPVALEGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ + L + VG + + L K+P I+V
Sbjct: 145 GQAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPH---------------------IIV 183
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YL++DE DRLL + + +L+
Sbjct: 184 ATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILK-------------- 229
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SAT++ L + L P+ ++
Sbjct: 230 -FIPRE-------RRT----------------YLFSATISSKIESLQRASLRDPVRVSIS 265
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L + + K +YL+ L+ + I+FT +V T R+ LL G
Sbjct: 266 SNKYQTVSTLLQHYIFIPHVRKDVYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLG 324
>gi|226356665|ref|YP_002786405.1| DEAD-box ATP-dependent RNA helicase 3 [Deinococcus deserti VCD115]
gi|226318655|gb|ACO46651.1| putative DEAD-box ATP-dependent RNA helicase 3 [Deinococcus deserti
VCD115]
Length = 602
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 139/324 (42%), Gaps = 72/324 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P L L GI+ P+Q E++ L RD+ + TG+GKTL++ALPI+Q L
Sbjct: 9 PELAARLAERGITEASPIQA----ESLPLTLAGRDMIGRARTGTGKTLAFALPIIQKLEP 64
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
S R RA+VV PTR+LA QV + F+ VGL+ G
Sbjct: 65 SRERARPPRAIVVAPTRELAKQVAEEFS--KSGVGLTTVTVYG----------------- 105
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
G Y P++ L+ VD++V TPGRL+DH+ RG L + + V+DE D +L
Sbjct: 106 --GASYAPQE--NALRRGVDVVVGTPGRLIDHLE--RGNLDLSAVEFAVLDEADEMLSVG 159
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+ + T+LQ T P R M+ S
Sbjct: 160 FADAIETILQKT-------------------------------------PDSRQT-MLFS 181
Query: 274 ATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
ATL D N+L++ L P+ + GE + + + +E K+ + + L LL
Sbjct: 182 ATLNNDINRLSRNYLREPVIVDMVGEGKSQAAQTVEHLKVRV-GRSRTRVLADLLTIYNP 240
Query: 333 EKCIVFTSSVESTHRLCTLLNHFG 356
EK IVFT + L L H G
Sbjct: 241 EKAIVFTRTKREADELANELIHRG 264
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 140/322 (43%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ ALV+ PTR+LA Q+ ++ +G+ + VG + + L KRP
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQQITSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH- 158
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
++VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 159 --------------------VIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ VL++ + +T+L SA
Sbjct: 199 GPIIDKVLKVIPKER-------NTYL-------------------------------FSA 220
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L+ P+ + ++Y L + L+ K K YL+ L L
Sbjct: 221 TMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKNKDSYLLYLANELSSSS 279
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
I+FT +V + RL +L G
Sbjct: 280 MIIFTRTVADSQRLSIILRRLG 301
>gi|189193121|ref|XP_001932899.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978463|gb|EDU45089.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 606
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 68/325 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L R + A+ MG ++ +Q Q+ I P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 134 LSERTRQAIDGMGFKTMTEIQ----QKAIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEML 189
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S + +VV PTR+LALQ+ V + + G+ +G ++ + E +L K
Sbjct: 190 SQLRFKPRNGTGVIVVSPTRELALQIFGVARELMEHHSQTFGICIGGANRSAEADKLRK- 248
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++L+ATPGRL+DH++ T+GF ++L LV+DE DR+L
Sbjct: 249 --------------------GVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILE 288
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + +++++ L T R+ M+
Sbjct: 289 VGFEDEMRSIIKI----------------------LPTERQT----------------ML 310
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + + LE ++C+S + L + L+
Sbjct: 311 FSATQTTKVEDLARISLKAGPLYINVDHRAEHSTVQGLEQGYVLCDSDTRFRLLFSFLKK 370
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNH 354
++K IVF SS S LLN+
Sbjct: 371 HQKKKVIVFLSSCASVDFYSELLNY 395
>gi|109095726|ref|XP_001086008.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Macaca mulatta]
Length = 406
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 61/284 (21%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ +
Sbjct: 53 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQ 111
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + L K+P I++ATP
Sbjct: 112 FEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH---------------------IIIATP 150
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 151 GRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL 203
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
SAT+T+ KL + L +P+ ++
Sbjct: 204 -------------------------------FSATMTKKVQKLQRAALKNPVKCAVS-SK 231
Query: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 232 YQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 141/325 (43%), Gaps = 66/325 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP LK AL + F + + + L RD+ + TGSGKT ++ALPI+
Sbjct: 20 LGLIDPLLK-ALDQVN----FKQPTEIQSQALPSALLGRDIIGVAETGSGKTAAFALPIL 74
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + L A ++ PTR+LA Q+ F ++ A+G+ + VG + L KR
Sbjct: 75 QKLWEEP-KGLFACILAPTRELAYQISQQFESLGSAMGVRCLVLVGGVDRMPQAVALAKR 133
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P I+VATPGRL DH+ T+GF+L L +LV+DE DRLL
Sbjct: 134 PH---------------------IIVATPGRLNDHLQNTKGFSLRSLKFLVLDEADRLLD 172
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ + +L++ + +T+L
Sbjct: 173 MDFGPDIDQILKVIPKER-------TTYL------------------------------- 194
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
SAT+T KL + L +P+ + ++Y+ L Y L K ++LV L+ SL
Sbjct: 195 FSATMTTKVAKLQRASLSNPVRVEV-SSKYQTVSTLLQYYLFIPLAQKDVHLVYLVNSLA 253
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
I+FT +V RL +L G
Sbjct: 254 SNSIILFTRTVHDAQRLSIVLRTLG 278
>gi|195481067|ref|XP_002101501.1| GE15594 [Drosophila yakuba]
gi|194189025|gb|EDX02609.1| GE15594 [Drosophila yakuba]
Length = 970
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 54/249 (21%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R R ALV++PT
Sbjct: 343 TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPT 402
Query: 111 RDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+L +Q ++ + P + G +G S E + L K
Sbjct: 403 RELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRK------------------- 443
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL+ TPGRL+DH+ T F L L +L++DE DRLL Y+ V QL + +
Sbjct: 444 --GINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYER---DVKQLVEAID 498
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R C +DK P+L +M+LSATLT +LA L L
Sbjct: 499 KQRAE------------------C------EDKQLPQLQRMLLSATLTSQVQQLAGLTLK 534
Query: 290 HPLFLTTGE 298
PL++ +
Sbjct: 535 DPLYIDNSD 543
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 66/327 (20%)
Query: 26 DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLS 85
+ P + L L P L ++ +G + +Q + I L +RD+ + TGSGKT +
Sbjct: 30 ETPFNTL-GLIPELLQTVEALGYKNATSIQA----QAIPSALQDRDIIGVAKTGSGKTAA 84
Query: 86 YALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
+ALPI+Q + L A ++ PTR+LA Q++ F A+ +G+ VG I +
Sbjct: 85 FALPILQKWWEDP-KPLYACILAPTRELAYQIQKQFEALGANLGVRCCCIVGGLDIMAQK 143
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
L KRP I+VATPGRL DH+ T+GF+L L YLV+DE
Sbjct: 144 VALAKRPH---------------------IVVATPGRLQDHLENTKGFSLRSLKYLVLDE 182
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DRLL + + +L++ + RR
Sbjct: 183 ADRLLDMDFGPIIDKILKVIPKE----------------------RRT------------ 208
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 325
M+ SAT++ +L + L +P+ + ++Y L+ Y + K + ++
Sbjct: 209 ----MLFSATMSTKVKRLQRASLVNPVKVEV-SSKYSTVSTLQQYYVFGPHMRKEVNMIT 263
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLL 352
L++SL + IVFT++V T RL +L
Sbjct: 264 LVRSLSGKSIIVFTNTVNDTIRLTLML 290
>gi|426221192|ref|XP_004004794.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Ovis aries]
Length = 670
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 163/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED D L L + LK A++ MG +++ +Q ++I P L RDL + TGSG
Sbjct: 174 FEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 228
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 229 KTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 288
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 289 SNRSAEA---------------------QKLANGINIVVATPGRLLDHMQNTPGFMYKNL 327
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 328 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 356
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 357 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPS 409
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS +S LLN+ + + + G Q+Q+ R
Sbjct: 410 EKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY---IDLPVMAIHGRQKQNKR 464
>gi|41327776|ref|NP_957518.1| probable ATP-dependent RNA helicase DDX47 isoform 2 [Homo sapiens]
gi|119616689|gb|EAW96283.1| hCG27698, isoform CRA_c [Homo sapiens]
Length = 406
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|84999282|ref|XP_954362.1| ATP-dependent RNA helicase [Theileria annulata]
gi|65305360|emb|CAI73685.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 503
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 156/338 (46%), Gaps = 58/338 (17%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYAL 88
P L ++ I+ FPVQ I ++ D I +PTG GKTL YAL
Sbjct: 39 FQPHLMNVIREKKINQFFPVQEKSIPLLINNTYRDKYSVLSCDFIITAPTGQGKTLCYAL 98
Query: 89 PIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
P++ + N L +L+++P+R+L Q+ +VF+ + +++ D
Sbjct: 99 PLIYNILNLKENRLLSLIIVPSRELVKQIYEVFSWFTDS----------KTTGHD----- 143
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVD----ILVATPGRLMDH-INATRGF--TLEHLCYL 201
+K P L+A + Y ++ V+ I + TPG L+++ ++ R F T EHL ++
Sbjct: 144 LKGPSLKARVFYGDRSFVKCHDMLVNDPPHIAICTPGVLVEYSVDFQREFYDTFEHLKWI 203
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE D +L + + W+ V+ L S S + + GV +
Sbjct: 204 VIDEVDTMLNQTFYEWVDVVVDLV----------------SRLKSKEPNQSLGVPQ---- 243
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK---L 318
K+++SAT+ + + L+L+ P+ L E+ YKLPE L+ ++C ++ L
Sbjct: 244 -------KILVSATVPLKSHDIELLELNRPILLRLKESIYKLPENLKQSYVVCSNRPVSL 296
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ L L+A L +VF S V++ H++ L+ +
Sbjct: 297 EFLKLMAFLYKDVTGNVLVFFSKVQTCHKITRLMQIYN 334
>gi|432854582|ref|XP_004067972.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Oryzias
latipes]
Length = 469
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 144/321 (44%), Gaps = 74/321 (23%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVR 100
+ +GI PVQ E P + E C+ + TGSGKT ++ LP++Q LS +
Sbjct: 18 KQLGIDKPTPVQ-----ENCVPAILEGRDCLGCAKTGSGKTAAFVLPVLQKLSEDPYGIF 72
Query: 101 CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
CL V+ PTR+LA Q+ + F + +GL + VG + + EL K+P
Sbjct: 73 CL---VLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALELSKQPH------- 122
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
++VATPGRL DH+ ++ F++ + +L++DE DRLL
Sbjct: 123 --------------VVVATPGRLADHVRSSNTFSMRKIKFLILDEADRLL---------- 158
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
E +D + L G+L R+ ++ SATLT
Sbjct: 159 ---------EQGCTDFTKDLEEILGTLPAKRQT----------------LLFSATLTDTL 193
Query: 281 NKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE----KC 335
+L + ++ P F +T ETR E L+ ++ K+K YLV L+Q+ ++
Sbjct: 194 QELKSIAMNKPFFWESTSETR--TVEELDQRYILTPEKVKDAYLVHLIQTFTDKHDDWSI 251
Query: 336 IVFTSSVESTHRLCTLLNHFG 356
I+FT++ ++ L +L F
Sbjct: 252 IIFTNTCKNCQILTMMLREFN 272
>gi|426225488|ref|XP_004006898.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Ovis aries]
Length = 408
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --VVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y L SK K L +L + + + I+ + V S
Sbjct: 227 KCAV-SSKYQTVEKLQQYYLFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 277
>gi|440893673|gb|ELR46355.1| ATP-dependent RNA helicase DDX18 [Bos grunniens mutus]
Length = 671
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 171/380 (45%), Gaps = 78/380 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVW 59
+E + +P LP + FED D L L + LK A++ MG +++ +Q
Sbjct: 157 DEGEDSEVPSLPLGLT----GAFEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ---- 207
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQ 116
++I P L RDL + TGSGKTL++ +P V+ L L++ PTR+LA+Q
Sbjct: 208 HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQ 267
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V + + GL +G S+ + E Q+L + ++I+
Sbjct: 268 TFGVLKELMTHHVHTYGLIMGGSNRSAEA---------------------QKLANGINIV 306
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L +++L
Sbjct: 307 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL------------ 354
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLT 295
LP+ R M+ SAT T+ LA++ L PL++
Sbjct: 355 ---LPT-----------------------RRQTMLFSATQTRKVEDLARISLKKEPLYVG 388
Query: 296 TGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + LE ++C S+ + L L L+ ++K +VF SS +S LLN+
Sbjct: 389 VDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY 448
Query: 355 FGELRIKIKEYSGLQRQSVR 374
+ + + G Q+Q+ R
Sbjct: 449 ---IDLPVLAIHGRQKQNKR 465
>gi|291392612|ref|XP_002712706.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Oryctolagus cuniculus]
Length = 406
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAV-SSKYQTVEKLQQYYIFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|303312885|ref|XP_003066454.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106116|gb|EER24309.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320031627|gb|EFW13587.1| ATP-dependent RNA helicase HAS1 [Coccidioides posadasii str.
Silveira]
Length = 604
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+Q MG ++ +Q + I P + RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 138 AIQEMGFETMTEIQ----RRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 193
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 194 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 245
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 246 -------------GVNLLIATPGRLLDHLQNTEGFVFKNLKALVIDEADRILEVGFEDEM 292
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ S++ M+ SAT T
Sbjct: 293 RQIVKILPSEDRQ-------------------------------------TMLFSATQTT 315
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +IC+S + L L + L+ ++K I
Sbjct: 316 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKII 375
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 376 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 410
>gi|119890683|ref|XP_001249975.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|297473570|ref|XP_002686695.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296488716|tpg|DAA30829.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10-like [Bos taurus]
Length = 671
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 171/380 (45%), Gaps = 78/380 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVW 59
+E + +P LP + FED D L L + LK A++ MG +++ +Q
Sbjct: 157 DEGEDSEVPSLPLGLT----GAFEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ---- 207
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQ 116
++I P L RDL + TGSGKTL++ +P V+ L L++ PTR+LA+Q
Sbjct: 208 HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQ 267
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V + + GL +G S+ + E Q+L + ++I+
Sbjct: 268 TFGVLKELMTHHVHTYGLIMGGSNRSAEA---------------------QKLANGINIV 306
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L +++L
Sbjct: 307 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL------------ 354
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLT 295
LP+ R M+ SAT T+ LA++ L PL++
Sbjct: 355 ---LPT-----------------------RRQTMLFSATQTRKVEDLARISLKKEPLYVG 388
Query: 296 TGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + LE ++C S+ + L L L+ ++K +VF SS +S LLN+
Sbjct: 389 VDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY 448
Query: 355 FGELRIKIKEYSGLQRQSVR 374
+ + + G Q+Q+ R
Sbjct: 449 ---IDLPVLAIHGRQKQNKR 465
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 128/299 (42%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ QE+I L RDL + TGSGKT S+ALPI++ L A+V+ PTR+LA Q+
Sbjct: 39 IQQESIPWALQGRDLIALAKTGSGKTGSFALPIIEALLKNPAPYF-AVVISPTRELASQI 97
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
++ F A+ +GL +G ++ L K P ++V
Sbjct: 98 EEHFQALGKGIGLKTVSVIGGIDEVTQMRMLAKTPH---------------------VIV 136
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGRL+ + +GF+L ++ YLV+DE DRLL E ++ L +L++ + +
Sbjct: 137 GTPGRLLYMLQNMKGFSLRNIKYLVLDEADRLLHEDFEKQLDQILEVLPRERQ------- 189
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
TFL SAT+T KL + L P+ +
Sbjct: 190 TFL-------------------------------FSATMTSKVQKLQRASLRDPIKVEVA 218
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ + K YL LL L IVF + + R+C +L G
Sbjct: 219 -SKYSTVDTLKQQYMFVPHMHKDTYLAYLLNELAGNTTIVFCCTCSNAQRICIILRSLG 276
>gi|76675332|ref|XP_597469.2| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Bos taurus]
gi|297471793|ref|XP_002685472.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296490513|tpg|DAA32626.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Bos taurus]
Length = 671
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 171/380 (45%), Gaps = 78/380 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVW 59
+E + +P LP + FED D L L + LK A++ MG +++ +Q
Sbjct: 157 DEGEDSEVPSLPLGLT----GAFEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ---- 207
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQ 116
++I P L RDL + TGSGKTL++ +P V+ L L++ PTR+LA+Q
Sbjct: 208 HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQ 267
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V + + GL +G S+ + E Q+L + ++I+
Sbjct: 268 TFGVLKELMTHHVHTYGLIMGGSNRSAEA---------------------QKLANGINIV 306
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L +++L
Sbjct: 307 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL------------ 354
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLT 295
LP+ R M+ SAT T+ LA++ L PL++
Sbjct: 355 ---LPT-----------------------RRQTMLFSATQTRKVEDLARISLKKEPLYVG 388
Query: 296 TGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + LE ++C S+ + L L L+ ++K +VF SS +S LLN+
Sbjct: 389 VDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY 448
Query: 355 FGELRIKIKEYSGLQRQSVR 374
+ + + G Q+Q+ R
Sbjct: 449 ---IDLPVLAIHGRQKQNKR 465
>gi|391344930|ref|XP_003746747.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Metaseiulus occidentalis]
Length = 721
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 74/298 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-----LRALVVLPTRD 112
+ + ++G L +D+ I SPTGSGKTL+YALPI+ L N + R +++ PTR+
Sbjct: 201 IQKMSVGHILKRKDVLIKSPTGSGKTLAYALPILHLLMNETPKIKREDGTRVVIITPTRE 260
Query: 113 LALQVKDVFAAIAPAVGLSV-GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
LALQ ++ A V G+ +G E + +L GI
Sbjct: 261 LALQTYQCLELLSKACQYIVPGVLMGGEKKKSE------KARLRKGIV------------ 302
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
++V TPGRL+DH++ T F+ +LV+DE DR+L ++ + +++ R +
Sbjct: 303 ---VMVGTPGRLIDHLDHTSSFSFGTADWLVIDEADRMLEMGFEQSISRIIESWRKERAG 359
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
+ S+A ++LSATLT KLA L L+ P
Sbjct: 360 KASNA---------------------------------ILLSATLTPGVEKLAGLSLNEP 386
Query: 292 LFLTTGE------TRYKLPERLESYKLICESKLKPLYLVALLQ-----SLGEEKCIVF 338
+ + + + LPE LE ++C +K LYLVAL ++ ++K +VF
Sbjct: 387 VVVDATQDCQGALDDFVLPESLEQTFMVCPTK---LYLVALSSLIVRGAIQKDKIVVF 441
>gi|50311527|ref|XP_455788.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660268|sp|Q6CJV1.1|DRS1_KLULA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49644924|emb|CAG98496.1| KLLA0F15752p [Kluyveromyces lactis]
Length = 748
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 71/327 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G +S P+Q A I L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLGSLGYTSPSPIQSAA----IPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 R--AVRCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+ PTR+LA+QV DV I V GL+ GLAVG ++ + L RP
Sbjct: 298 KPAHIASTRVVVLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQALKTRP- 356
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DH+ + F+++ + LV+DE DR+L E
Sbjct: 357 --------------------DIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEG 396
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L +PS +L + S
Sbjct: 397 FQEELQEIMSL---------------IPSKRQTL-----------------------LFS 418
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSL-- 330
AT+ +L L L P+ + + + + + ++ LKP L L++ L
Sbjct: 419 ATMNSKIKQLISLSLKKPVRIMIDPPKQAADKLTQEFIRIRKRDHLKPALLYQLIRKLDN 478
Query: 331 -GEEKCIVFTSSVESTHRLCTLLNHFG 356
+++ +VF + E+ H+L +L G
Sbjct: 479 TSQKRIVVFVARKETAHKLRIVLGLLG 505
>gi|67624705|ref|XP_668635.1| DEAD box protein [Cryptosporidium hominis TU502]
gi|54659844|gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
Length = 441
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 61/290 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++TI L RD+ + TGSGKT S+ +PI+Q L + V + A+++ PTR+L +Q+
Sbjct: 54 IQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQRLLDDQVP-MYAVILAPTRELCVQI 112
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F+A + L + VG + + L K+P I+V
Sbjct: 113 SEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH---------------------IIV 151
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A+PGRL+DH+ T+GF + + +LV+DE DRLL ++ L +++ S +NR +
Sbjct: 152 ASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVE---SSPKNR----T 204
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL ++ L +P+ +
Sbjct: 205 TYL-------------------------------FSATMTTKVAKLQKISLSNPIKICV- 232
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
T+Y L Y + K K Y + LLQ+LG+ I+F ++ + R
Sbjct: 233 NTKYDTAANLMQYYMFIPFKYKWSYFIGLLQNLGQYTGIIFCNTCINCRR 282
>gi|145300478|ref|YP_001143319.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362912|ref|ZP_12963530.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853250|gb|ABO91571.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356685918|gb|EHI50537.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 417
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 30/202 (14%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L +G ++ P+Q I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLSELGYAAPTPIQA----RAIPVILTGRDLMAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
L ++ R +RALV++PTR+LA+QV D GL+ L G SIA ++
Sbjct: 66 LMQHPASDTARPIRALVLVPTRELAVQVFDSVVRYGQGTGLTSALVYGGVSIAAQV---- 121
Query: 150 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 209
+ LQ+ VD+L+ATPGRL+DH+ +LEHL +LV DE DR+
Sbjct: 122 -----------------EALQAGVDLLIATPGRLLDHLRQG-ALSLEHLSHLVFDEADRM 163
Query: 210 LREAYQAWLPTVLQLTRSDNEN 231
L + + +L+ +D +
Sbjct: 164 LDMGFMDEIKALLKQIPADRQT 185
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ ++ P+Q + I L RD+ + TGSGKT ++ LPI+Q L + +
Sbjct: 103 ACENLKFTNPTPIQA----QAIPLALQGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QS 157
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ A+ + + VG + + L K+P
Sbjct: 158 LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKKPH-------- 209
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L+HL Y+V+DE DRLL + L +
Sbjct: 210 -------------IIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKI 256
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + + + SAT++
Sbjct: 257 LKVLPREGRHTY-------------------------------------LFSATMSSKVE 279
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P+ ++ + +++ L + K K LYL+ LL I+F+ +
Sbjct: 280 SLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRT 339
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 340 VNETQRIAILLRTLG 354
>gi|157376496|ref|YP_001475096.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157318870|gb|ABV37968.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 419
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 154/353 (43%), Gaps = 81/353 (22%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L +L L +G SS P+Q I L +D+ + TG+GKT ++ALPI+Q
Sbjct: 7 ALSQKLITLLSELGYSSPTPIQA----HAIPVILAGQDIMAGAQTGTGKTAAFALPILQK 62
Query: 94 LS-----------NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
LS +++ +RALV+ PTR+LALQV FA GL+ + G
Sbjct: 63 LSECDVELSDTKQTVSLKPVRALVLTPTRELALQVNQSFAKYGKDSGLNTAIVYG----- 117
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYL 201
G+ D + L++ VDILVATPGRL+DH+ RG TL+ L +L
Sbjct: 118 --------------GVSIDAQ--ADALKAGVDILVATPGRLLDHLR--RGSLTLKQLNFL 159
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V DE DR+L ++ + +L+ S + A TF PS F
Sbjct: 160 VFDEADRMLDMGFKDEINAILKQVPSKRQTLLFSA-TFDPSVF----------------- 201
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 321
LS L QDP KL ++D + L + Y + +S +LIC
Sbjct: 202 ---------ALSKRLQQDP-KLIEVDKRNTLAAKVEQVVYAVDADRKS-ELICH------ 244
Query: 322 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L++S ++ ++F+ + + + G IK + + G Q+VR
Sbjct: 245 ----LVKSKLWQQVLIFSRKKQGADNIAAKMVKAG---IKAQAFHGDLSQAVR 290
>gi|449550754|gb|EMD41718.1| hypothetical protein CERSUDRAFT_79353 [Ceriporiopsis subvermispora
B]
Length = 561
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
ALQ MG +++ P+Q +++I L RD+ + TGSGKTL++ +P ++ L +
Sbjct: 35 ALQEMGFTTMTPIQ----EKSIPALLTGRDVLGAARTGSGKTLAFLIPAIELLHRMKFKP 90
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
++V PTR+LALQ+ V + + G+ +G ++ +R + E
Sbjct: 91 RNGTGIIIVSPTRELALQIFGVAKELMAHHSQTFGIVMGGAN---------RRAEAE--- 138
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
+LQ V+++VATPGRL+DH+ T+GF +L LV+DE DR+L ++ +
Sbjct: 139 ---------KLQKGVNLIVATPGRLLDHLQDTKGFVFRNLKALVIDEADRILEVGFEEEM 189
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++ + + ENR S M+ SAT T
Sbjct: 190 KRIINILPT--ENRQS-----------------------------------MLFSATQTT 212
Query: 279 DPNKLAQLDLH-HPLFLTTGET-RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ +T L ++C S + L L L+ ++K +
Sbjct: 213 KVTDLARISLRPGPLYIDVDKTENTSTVATLSQGYVVCPSDRRFLLLFTFLKKHMKKKIV 272
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + + + + G Q+Q R
Sbjct: 273 VFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 307
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 184 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 239
Query: 102 L--RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R L++ PTR+LA+Q+ + +A + GL VG G+
Sbjct: 240 FATRVLILTPTRELAVQIHSMIQKLAQFTDIKCGLIVG-------------------GLS 280
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
++V+ L+S DI+VATPGR++DH+ + L+ L L++DE DRLL+ + +
Sbjct: 281 VREQEVV--LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIT 338
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+++L C P R M+ SAT+T++
Sbjct: 339 ELVRL----------------------------C---------PKRRQT-MLFSATMTEE 360
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIV 337
+L +L L+ PL L+ + + P E I ++ + L++L + K I+
Sbjct: 361 VKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVII 420
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F+ + ++ HRL L FG +K E G Q+ R
Sbjct: 421 FSGTKQAAHRLKIL---FGLAGLKAAELHGNLTQAQR 454
>gi|388855550|emb|CCF50773.1| probable HAS1-helicase associated with Set1p [Ustilago hordei]
Length = 571
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 71/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E P L +P K A++ MG ++ VQ I P + +D+ + TGSGKTL
Sbjct: 48 ERQPFSTLDLSEPTRK-AIETMGFKTMTEVQA----RCIPPLMAGKDVLGAAQTGSGKTL 102
Query: 85 SYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
S+ +P ++ L + A+++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 103 SFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANR 162
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
E +L Q V+++VATPGRL+DH+ T+GF +L L
Sbjct: 163 RAEADKL---------------------QKGVNLIVATPGRLLDHLQNTKGFVFSNLKAL 201
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
+DE DR+L ++ + ++++ +DN
Sbjct: 202 CIDEADRILEIGFEDEMRQIVKILPNDNRQ------------------------------ 231
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLK 319
M+ SAT T LA++ L PL++ + RLE ++CES +
Sbjct: 232 -------SMLFSATQTTKVQDLARISLRPGPLYINVHADLAASTVSRLEQGYVVCESDRR 284
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ +K IVF SS S LLN + + + + G Q+Q R
Sbjct: 285 FLLLFTFLKKNAGKKIIVFMSSCNSVKYHSDLLNF---IDVPVLDLHGKQKQQKR 336
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 181 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 236
Query: 102 L--RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R L++ PTR+LA+Q+ + +A + GL VG G+
Sbjct: 237 FATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVG-------------------GLS 277
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
++V+ L+S DI+VATPGR++DH+ + L+ L L++DE DRLL+ + +
Sbjct: 278 VREQEVV--LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIT 335
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+++L C P R M+ SAT+T++
Sbjct: 336 ELVRL----------------------------C---------PKRRQT-MLFSATMTEE 357
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIV 337
+L +L L+ PL L+ + + P E I ++ + L++L + K I+
Sbjct: 358 VKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVII 417
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F+ + ++ HRL L FG +K E G Q+ R
Sbjct: 418 FSGTKQAAHRLKIL---FGLAGLKAAELHGNLTQAQR 451
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 62/297 (20%)
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKD 119
QE P L D+ + TGSGKT ++A+PI+Q L + + ALV+ PTR+LALQ+ +
Sbjct: 41 QEQAVPHLLA-DVIGLAQTGSGKTGAFAMPILQELLDTP-QANFALVLSPTRELALQIAE 98
Query: 120 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 179
F A+ +G+ + VG + + L KRP I+V T
Sbjct: 99 QFEALGAGIGVRCAVLVGGIDMMAQAIALGKRPH---------------------IIVGT 137
Query: 180 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
PGR++DH++ T+GFTL+ L +LV+DE DRLL ++ + +L++
Sbjct: 138 PGRVVDHLSNTKGFTLKALRHLVLDEADRLLNMDFEQEIDQILKVI-------------- 183
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
P R ++ SAT+T KL + L +P+ + +
Sbjct: 184 -----------------------PRERRTQL-FSATMTTKVAKLQRACLQNPVKVEV-DA 218
Query: 300 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ + L L +K K YL L L +VFT + ++T +L +L + G
Sbjct: 219 KYRTVDTLRQQYLFIPAKHKDCYLAYFLTELAGATFMVFTRTCDNTRKLALMLRNLG 275
>gi|425768575|gb|EKV07093.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum PHI26]
gi|425776136|gb|EKV14370.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum Pd1]
Length = 602
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
+ +MG +++ +Q Q T+ P L RD+ + TGSGKTL++ LP ++ L +
Sbjct: 133 GINDMGFTTMTEIQ----QRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP 188
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
LVV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 189 RNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLMK-------- 240
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ +
Sbjct: 241 -------------GVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEM 287
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ P M+ SAT T
Sbjct: 288 RQIVKIL-------------------------------------PKEERQTMLFSATQTT 310
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ ++ + LE ++CE+ + L L + L+ ++K I
Sbjct: 311 KVEDLARISLRPGPLYINVDHSKEHSTVAGLEQGYVVCEADKRFLLLFSFLKRNLKKKII 370
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + E G Q+Q R
Sbjct: 371 VFFSSCNCVKYHAELLNY---IDLPVLELHGKQKQQKR 405
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 61/305 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + E+I L +D+ + TGSGKT ++ALP++Q+L + + A V+ PTR
Sbjct: 79 FKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQSLWD-SPSAFFACVLAPTR 137
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ +G+ + VG + + L KRP
Sbjct: 138 ELAYQISQQFDALGSTIGVKTVVIVGGMDMMSQAIALSKRPH------------------ 179
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
++VATPGRL DH+ T+GF+L +L +L++DE DRLL + + +L++
Sbjct: 180 ---VIVATPGRLHDHLEHTKGFSLRNLQFLIMDEADRLLDMDFGPVIDKILKV------- 229
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
+P ER K Y + SAT+T KL + L++P
Sbjct: 230 --------IPK-------------ER----KTY------LFSATMTTKVAKLQRASLNNP 258
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
+ + +Y L L K K YLV L L + IVFT +V RL +
Sbjct: 259 VKVEV-SAKYDTVSALVQTYLFLPFKHKDTYLVYLANELSGKSLIVFTRTVHDASRLSLI 317
Query: 352 LNHFG 356
L G
Sbjct: 318 LRTLG 322
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 137/316 (43%), Gaps = 74/316 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVK 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q+
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ F A+ + L + VG + L KRP ++VA
Sbjct: 107 EQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------VIVA 145
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+ + E T
Sbjct: 146 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERE-------T 198
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
FL SAT+T+ KL + L +P+ +
Sbjct: 199 FL-------------------------------FSATMTKKVRKLQRACLRNPVKIEAA- 226
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
++Y + L+ +K K YLV +L + E ++FT + + T L +L G
Sbjct: 227 SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFR 286
Query: 359 RIKIKEYSGLQRQSVR 374
I I SG QS R
Sbjct: 287 AIPI---SGQMTQSKR 299
>gi|50286247|ref|XP_445552.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661437|sp|Q6FW42.1|DRS1_CANGA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49524857|emb|CAG58463.1| unnamed protein product [Candida glabrata]
Length = 725
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 141/328 (42%), Gaps = 82/328 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L N+G P+Q A TI L +D+ + TGSGKT ++ +PI++ L + V
Sbjct: 220 GLSNLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKV 275
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGI 158
R +V+ PTR+LA+QV DV I V L+ GLAVG ++ + L RP
Sbjct: 276 ASTRVIVLTPTRELAIQVADVGKKIGQFVSNLTFGLAVGGLNLRQQEQMLKTRP------ 329
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
DI++ATPGR +DHI + F ++ + LV+DE DR+L + +Q L
Sbjct: 330 ---------------DIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDEL 374
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++ L LPS +L + SAT+
Sbjct: 375 NEIMSL---------------LPSKRQTL-----------------------LFSATMNS 396
Query: 279 DPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL- 330
+L L L P+ + P + + KL E LKP L L++ L
Sbjct: 397 RIKQLISLSLKRPVRIMID------PPKQAATKLTQEFVRIRKRDHLKPSLLFNLIRKLD 450
Query: 331 --GEEKCIVFTSSVESTHRLCTLLNHFG 356
G+++ +VF + + H+L +L G
Sbjct: 451 PNGQKRIVVFVARKDMAHKLRIILGLLG 478
>gi|393218838|gb|EJD04326.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 540
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 154/355 (43%), Gaps = 71/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E P L +P K A+ MG +++ PVQ + I P L +D+ + TGSGKTL
Sbjct: 17 ERQPFSSLELSEPTTK-AIAEMGFTTMTPVQA----KAIPPLLAGKDVLGAARTGSGKTL 71
Query: 85 SYALPIVQTLSNRAV--RCLRALVVL-PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
++ +P V+ L R +++L PTR+LALQ+ V + + G+ +G ++
Sbjct: 72 AFLVPAVELLHRLKFKPRNGTGIIILSPTRELALQIFGVAKELMAYHSQTFGIVIGGANR 131
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
E +L+K V+++VATPGRL+DH+ T+GF +L L
Sbjct: 132 KAEAEKLVK---------------------GVNLVVATPGRLLDHLENTKGFVFRNLKAL 170
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DR+L ++ + ++ + NENR S
Sbjct: 171 VIDEADRILEIGFEEEMKKIISIL--PNENRQS--------------------------- 201
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLK 319
M+ SAT T LA++ L PL + E L ++C S +
Sbjct: 202 --------MLFSATQTTKVQDLARISLRPGPLHIDVDKEEETSTVSTLSQGYVVCPSDRR 253
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 254 FLLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 305
>gi|392863973|gb|EAS35240.2| ATP-dependent RNA helicase HAS1 [Coccidioides immitis RS]
Length = 672
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+Q MG ++ +Q + I P + RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 206 AIQEMGFETMTEIQ----RRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 261
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 262 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 313
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 314 -------------GVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEM 360
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ S++ M+ SAT T
Sbjct: 361 RQIVKILPSEDRQ-------------------------------------TMLFSATQTT 383
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +IC+S + L L + L+ ++K I
Sbjct: 384 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKII 443
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 444 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 478
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 181 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 236
Query: 102 L--RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R L++ PTR+LA+Q+ + +A + GL VG G+
Sbjct: 237 FATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVG-------------------GLS 277
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
++V+ L+S DI+VATPGR++DH+ + L+ L L++DE DRLL+ + +
Sbjct: 278 VREQEVV--LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIT 335
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+++L C R M+ SAT+T++
Sbjct: 336 ELVRL----------------------------CPKRRQ----------TMLFSATMTEE 357
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIV 337
+L +L L+ PL L+ + + P E I ++ + L++L + K I+
Sbjct: 358 VKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVII 417
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F+ + ++ HRL L FG +K E G Q+ R
Sbjct: 418 FSGTKQAAHRLKIL---FGLAGLKAAELHGNLTQAQR 451
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 65/322 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ ALV+ PTR+LA Q+ ++ +G+ + VG + + L KRP
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH- 158
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 159 --------------------IIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ +L++ + +T+L SA
Sbjct: 199 GPIIDKILKVIPKER-------NTYL-------------------------------FSA 220
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L+ P+ + ++Y L + L+ K K YL+ L L
Sbjct: 221 TMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKNKDAYLLYLANELSSSS 279
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
++FT +V + RL +L G
Sbjct: 280 MMIFTRTVADSQRLSIILRRLG 301
>gi|119192364|ref|XP_001246788.1| probable ATP-dependent RNA helicase [Coccidioides immitis RS]
gi|118572554|sp|Q1EA54.1|HAS1_COCIM RecName: Full=ATP-dependent RNA helicase HAS1
Length = 604
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+Q MG ++ +Q + I P + RD+ + TGSGKTLS+ +P V+ LS +
Sbjct: 138 AIQEMGFETMTEIQ----RRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP 193
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 194 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK-------- 245
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ +
Sbjct: 246 -------------GVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEM 292
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ S++ M+ SAT T
Sbjct: 293 RQIVKILPSEDRQ-------------------------------------TMLFSATQTT 315
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + E LE +IC+S + L L + L+ ++K I
Sbjct: 316 KVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKII 375
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 376 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 410
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 61/288 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RD+ +PTGSGKTL++ +PI+ L + + A V+ PTR+LA Q+ F A+ A+G
Sbjct: 42 RDIIGIAPTGSGKTLAFVIPILHRLWDNP-QGYFACVLSPTRELAYQISAQFEALGAAMG 100
Query: 130 L-SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
+ SV + G + L ++P I+VATPGRL DH+
Sbjct: 101 VQSVVIVGGDDDRVQQAVRLAQKPH---------------------IIVATPGRLHDHLK 139
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 248
+T+GF+L L +LV+DE DRLL +Q + ++Q +P
Sbjct: 140 STKGFSLRSLKHLVLDEADRLLDLDFQREITEIMQ---------------SIPK------ 178
Query: 249 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
RC + SAT+T + +KL + L P+ + RY L
Sbjct: 179 --ERC---------------TYLFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLV 221
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ L+C K + LV L+ SL + IVF +V RL +L G
Sbjct: 222 QHYLLCPLVEKEVTLVYLINSLVQNLIIVFVRTVADAKRLSIILRSLG 269
>gi|194891931|ref|XP_001977562.1| GG18185 [Drosophila erecta]
gi|190649211|gb|EDV46489.1| GG18185 [Drosophila erecta]
Length = 978
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 149/346 (43%), Gaps = 95/346 (27%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V Q+TI L +D+ + S TGSGKTL+YALP+V+ L R R ALV++PT
Sbjct: 355 TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKEQPRIQRKDGVLALVIVPT 414
Query: 111 RDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+L +Q ++ + P + G +G S E + L K
Sbjct: 415 RELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRK------------------- 455
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL+ TPGRL+DH+ T F L L +L++DE DRLL Y+ V QL + +
Sbjct: 456 --GINILIGTPGRLVDHLLHTTSFKLAKLQFLILDEADRLLELGYER---DVKQLVEAID 510
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R C +DK P+L +M+LSATLT +LA L L
Sbjct: 511 KQRAE------------------C------EDKDLPQLQRMLLSATLTSQVQQLAGLTLK 546
Query: 290 HPLFLTT----------GETRYK--------------------------LPERLESYKLI 313
PL++ G+ Y+ +PE L+ ++
Sbjct: 547 DPLYIDNSDEAASAALKGKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVV 606
Query: 314 CESKLKPLYLVALL-----QSLGEEKCIVFTSSVESTHRLCTLLNH 354
KL+ + L ALL S + K IVF S+ E + +LN
Sbjct: 607 VPPKLRLVALSALLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNE 652
>gi|330844673|ref|XP_003294242.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
gi|325075337|gb|EGC29238.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
Length = 599
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 72/349 (20%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
+LP D K +++ M + P+Q ++I P L +DL + TGSGKTL++ +P
Sbjct: 123 NLPIHD-NTKKSIEEMTFKKMTPIQA----KSILPLLEGKDLLGAARTGSGKTLAFLIPA 177
Query: 91 VQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 147
++ L + +++ PTR+LALQ+ V + + G+ +G
Sbjct: 178 IEILVKSGFKPRNGTGVIIISPTRELALQIYGVAKELLKYHTQTHGIIIG---------- 227
Query: 148 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 207
G PE+ + L+ V++LVATPGRL+DH+ T+GF ++L LV+DE D
Sbjct: 228 ---------GAAKKPEE--ERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLVIDEAD 276
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 267
R+L ++ + +++L + +
Sbjct: 277 RILEVGFEEEMHKIVKLLPKNRQT------------------------------------ 300
Query: 268 VKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVA 325
M+ SAT T+ +A++ L++ P+++ + R E LE ++C S+ + L L
Sbjct: 301 --MLFSATQTRKVEDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERRFLLLYT 358
Query: 326 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ +K IVF SS + LLN+ + I + E G Q+Q R
Sbjct: 359 FLKRNLNKKVIVFLSSCNAVKYTAELLNY---IDIPVLELHGRQKQQKR 404
>gi|322785859|gb|EFZ12478.1| hypothetical protein SINV_10006 [Solenopsis invicta]
Length = 936
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 42/242 (17%)
Query: 10 PVLPWMR----SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP 65
P +P M PV S+F + L + QNMGI+ + VQ Q+ I P
Sbjct: 259 PDVPTMGQRFVKPVHESVFTEVTFADLNIHPYMISNLEQNMGITKMTTVQ----QKAI-P 313
Query: 66 GLFE-RDLCINSPTGSGKTLSYALPIVQTLS------NRAVRCLRALVVLPTRDLALQVK 118
+F +D+ I S TGSGKTL+YALPIV+ L NR L ALV++PTR+LALQ
Sbjct: 314 QIFSAKDVLIRSQTGSGKTLAYALPIVELLHKIRPQLNRN-SGLSALVIVPTRELALQTY 372
Query: 119 DVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F + P + G +G KR +A L+ +ILV
Sbjct: 373 ECFIKLVKPFTWIVPGYIIGGE----------KRKAEKA-----------RLRKGCNILV 411
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ---AWLPTVLQLTRSDNENRFS 234
+TPGRL+DHI T+ L + Y V+DE DR+L Y+ + + + L+++ S+NE
Sbjct: 412 STPGRLLDHIKHTKALRLNDVKYFVLDEADRMLDMGYEMDISGIVSALKVSCSNNEESGY 471
Query: 235 DA 236
DA
Sbjct: 472 DA 473
>gi|340372235|ref|XP_003384650.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Amphimedon queenslandica]
Length = 598
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 68/321 (21%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLP 109
F +V TI L +D+C + TG+GKT ++ LPI++ L R +R R L++LP
Sbjct: 165 FTSPTSVQARTIPLALMGKDICACAATGTGKTAAFMLPILERLLYRPTRMRSTRVLILLP 224
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
TR+LA+QV V A+A + + LA G + + L K P
Sbjct: 225 TRELAIQVHSVGKALAQNTKIDLCLAAGGLEGRSQEASLRKSP----------------- 267
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
DI++ATPGRL+DH++ T F+L+ + LV+DE DR+L E + + +
Sbjct: 268 ----DIVIATPGRLVDHLHNTPSFSLQAIEILVLDEADRMLDEHFLDQMNEI-------- 315
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
IR C V R ++ SAT+T + +LA+L LH
Sbjct: 316 --------------------IRLCPVSRQ----------TLLFSATMTDEVEELARLSLH 345
Query: 290 HPLFL---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
+P+ + + +T L + + E+ + + L+S ++ C+VF + + H
Sbjct: 346 NPVRVFVDSNTDTADNLHQEFVRIRSNKEADREAIVSALCLRSF-KDHCLVFVPTKKQAH 404
Query: 347 RLCTLLNHFGELRIKIKEYSG 367
R +L G L IK E G
Sbjct: 405 RQRLIL---GLLGIKTSELHG 422
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 119 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 174
Query: 102 L--RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R L++ PTR+LA+Q+ + +A + GL VG G+
Sbjct: 175 FATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVG-------------------GLS 215
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
++V+ L+S DI+VATPGR++DH+ + L+ L L++DE DRLL+ + +
Sbjct: 216 VREQEVV--LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIT 273
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+++L C R M+ SAT+T++
Sbjct: 274 ELVRL----------------------------CPKRRQ----------TMLFSATMTEE 295
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIV 337
+L +L L+ PL L+ + + P E I ++ + L++L + K I+
Sbjct: 296 VKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVII 355
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F+ + ++ HRL L FG +K E G Q+ R
Sbjct: 356 FSGTKQAAHRLKIL---FGLAGLKAAELHGNLTQAQR 389
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 135/304 (44%), Gaps = 65/304 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+Q+ ++I L +D+ + TGSGKT ++ALP++Q L + R LV+ PTR+
Sbjct: 62 PIQI----QSIPHALNGKDVIGLAQTGSGKTGAFALPVLQDLLHEP-RAFHTLVLSPTRE 116
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F + +G+ + VG + + ++ KRP
Sbjct: 117 LASQIAEQFECLGKDIGVKCAVLVGGMDMTSQSLQIGKRPH------------------- 157
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+LV TPGR++DH+ T+GF+L L L++DE DRLL ++ + T+L++
Sbjct: 158 --VLVGTPGRVVDHLENTKGFSLRQLKVLILDEADRLLNLDFEEEIDTILKVI------- 208
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
P R ++ SAT+T NKL + L P+
Sbjct: 209 ------------------------------PRERRTQL-FSATMTSKVNKLQRACLRDPV 237
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ ++Y + L+ L +K K Y LL L ++FT + E T +L +
Sbjct: 238 KVEVA-SKYSTVKSLKQNYLFVPAKHKECYACYLLNELSASTIMMFTRTCEQTRKLALVA 296
Query: 353 NHFG 356
+ G
Sbjct: 297 RNLG 300
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEKSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
F A+ + L + VG + + L K+P I+V
Sbjct: 145 GQAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPH---------------------IVV 183
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L L YL++DE DRLL + + +L+
Sbjct: 184 ATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILK-------------- 229
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
F+P RR + SAT++ L + L P+ ++
Sbjct: 230 -FVPRE-------RRT----------------YLFSATISSKIESLQRASLRDPVKVSIS 265
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y+ L L K ++L+ L+ + IVFT +V T R+ LL G
Sbjct: 266 SNKYQTVSTLLQNYLFIPHPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLG 324
>gi|410963866|ref|XP_003988480.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Felis catus]
Length = 406
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 63/292 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
+++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --VIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
++Y+ E+L+ Y + SK K L +L + + + I+ + V S
Sbjct: 225 KCAVS-SKYQTVEKLQQYYVFIPSKFKSKRLGSLNKFKAKARSILLATDVAS 275
>gi|194767109|ref|XP_001965661.1| GF22616 [Drosophila ananassae]
gi|190619652|gb|EDV35176.1| GF22616 [Drosophila ananassae]
Length = 921
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 54/247 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRD 112
V Q+ I P L +D+ + S TGSGKTL+YALP+V+ L + R R ALV++PTR+
Sbjct: 295 VQQKAIPPILERKDVLVRSQTGSGKTLAYALPLVEILQKQQPRIQRKDGVLALVIVPTRE 354
Query: 113 LALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
L +Q ++ + P + G +G S E + L K
Sbjct: 355 LVMQTYELLQKLVKPYTWIVPGSLLGGESRKSEKARLRK--------------------- 393
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
++ILV TPGRL+DH+ T F L L +LV+DE DRLL Y+ V QL + ++
Sbjct: 394 GINILVGTPGRLVDHLLHTASFRLTRLQFLVLDEADRLLELGYER---DVKQLVEAIDKQ 450
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
R S+A + K P+L +++LSATLT +LA L L P
Sbjct: 451 R-SEA-----------------------EQKDLPQLQRLLLSATLTSQVQQLAGLTLKDP 486
Query: 292 LFLTTGE 298
L++ +
Sbjct: 487 LYIDNSD 493
>gi|409051397|gb|EKM60873.1| hypothetical protein PHACADRAFT_110678 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 71/352 (20%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
P L +P +K AL MG + + A+ +++I P L +D+ + TGSGKTL++
Sbjct: 23 PFSELELSEPTIK-ALSGMGFTHM----TAIQEKSIPPLLAGKDVLGAARTGSGKTLAFL 77
Query: 88 LPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+P V+ L + ++V PTR+LALQ+ V + + G+ +G ++ E
Sbjct: 78 IPAVELLHRMKFKPRNGTGIVIVSPTRELALQIFGVAKELMAHHSQTFGIVMGGANRRAE 137
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
+L Q V+++VATPGRL+DH+ T+GF +L LV+D
Sbjct: 138 ADKL---------------------QKGVNLVVATPGRLLDHLENTKGFVFRNLKCLVID 176
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DR+L ++ + ++ + NENR S
Sbjct: 177 EADRILEVGFEEEMKKIIAIL--PNENRQS------------------------------ 204
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLY 322
M+ SAT T LA++ L PL++ +T L ++C S + L
Sbjct: 205 -----MLFSATQTTKVTDLARISLRPGPLYIDVDKTESTSTVSTLSQGYVVCPSDRRFLL 259
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L+ ++K +VF SS S LLN+ + + + G Q+Q R
Sbjct: 260 LFTFLKKHMKKKIVVFFSSCNSVKYHAELLNY---IDVPTLDLHGKQKQQKR 308
>gi|195132139|ref|XP_002010501.1| GI14650 [Drosophila mojavensis]
gi|193908951|gb|EDW07818.1| GI14650 [Drosophila mojavensis]
Length = 893
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 136/288 (47%), Gaps = 60/288 (20%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNM-GISSLFPVQVAVWQETIGPGLFERDLCINS 76
PV ++F ++ L L P L ++ IS L VQ Q+TI L +D+ + S
Sbjct: 244 PVRETIFSGTKVESL-GLHPHAVKNLSDLLSISQLTTVQ----QKTIPHVLAGKDVLVRS 298
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAA-IAPAVGL 130
TGSGKTL+YALP+V+ L ++ R R ALV++PTR+LALQ ++F + P +
Sbjct: 299 QTGSGKTLAYALPLVERLQSQLPRIKRTDGVVALVIVPTRELALQTYELFQKLVKPFTWI 358
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
G +G S E + L K +++L+ TPGRL+DH+ T
Sbjct: 359 VPGALLGGESRKSEKARLRK---------------------GINVLLGTPGRLVDHLLHT 397
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
F L L +LV+DE DRLL Y+ V QL + +++R +
Sbjct: 398 ASFKLSKLQFLVLDEADRLLELGYER---DVKQLVEAIDKHRAEEPQ------------- 441
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+P L +M+LSATLT +LA L L PL++ +
Sbjct: 442 -----------EPPVALQRMLLSATLTSQVQQLAGLTLKDPLYIDNSD 478
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 63/315 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ ++ P+Q + I L RD+ + TGSGKT ++ LPI+Q L + +
Sbjct: 103 ACENLKFTNPTPIQA----QAIPLALEGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QS 157
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L L++ PTR+LA Q+ A+ + + VG + + L K+P
Sbjct: 158 LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKKPH-------- 209
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+VATPGRL+DH+ T+GF+L+HL Y+V+DE DRLL + L +
Sbjct: 210 -------------IIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKI 256
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L++ + + + + SAT++
Sbjct: 257 LKVLPREGRHTY-------------------------------------LYSATMSSKVE 279
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L +P+ ++ + +++ L + K K LYL+ LL I+F+ +
Sbjct: 280 SLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRT 339
Query: 342 VESTHRLCTLLNHFG 356
V T R+ LL G
Sbjct: 340 VNETQRIAILLRTLG 354
>gi|328871046|gb|EGG19418.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 880
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 173/398 (43%), Gaps = 86/398 (21%)
Query: 2 EEAKKKSMPVLPWMRSPVDVS--LFEDCPLDHLPCLDPRLKVAL-QNMGISSLFPVQVAV 58
+E+ K ++P + +S +D + L R+ L NM I+ +Q +
Sbjct: 170 DESYKPTLPSVEPKKSHIDSKEVFTAGSNFGDITSLSSRMTDNLINNMKITQPTLIQSS- 228
Query: 59 WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDL 113
+I L RD+ + + TGSGKTL+Y +PI+Q LS+ R R A+V+ PTR+L
Sbjct: 229 ---SISHVLQGRDVMMKAQTGSGKTLAYLIPIIQILSSYEKRITREEGAYAIVIAPTREL 285
Query: 114 ALQVKDVFAAI-APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
A+Q+ V + P + G +G G D E + L+
Sbjct: 286 AIQIYQVLEKLLKPFHWIIPGAIMG-------------------GESRDKEK--KRLRKG 324
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
V I+VATPGR++DH+ T+ F + +LV+DE DRLL ++ + +++L N NR
Sbjct: 325 VSIVVATPGRMLDHLRKTQSFKIARTRFLVLDEADRLLDLGFEKDITAIIELL---NINR 381
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
P+ + T+ P+ +++SATLT+ N+LA L L+ P+
Sbjct: 382 ---TKILKPATINTDTTVATTTTTTSIPTSPFVHRQNILVSATLTEGINRLANLSLYKPV 438
Query: 293 FL---------------------------------TTGETRYK-----LPERLESYKLIC 314
++ TT +T K P++L+ Y +
Sbjct: 439 YVAVDKSQDIMVDDQADGDEMDEKQTLTVKEDGDKTTLDTLLKNSTLVAPKQLDQYYVEV 498
Query: 315 ESKLKPLYLVALLQ--------SLGEEKCIVFTSSVES 344
E+K + + LV+ ++ S G K IVF SS S
Sbjct: 499 EAKERLVALVSFMKWKTTQSQISTGNSKMIVFFSSCSS 536
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 136/317 (42%), Gaps = 76/317 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVK 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q+
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ F A+ + L + VG + L KRP ++VA
Sbjct: 107 EQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------VIVA 145
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+
Sbjct: 146 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE--------------- 190
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTG 297
PR K L SAT+T+ KL + L +P+ +
Sbjct: 191 ------------------------EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA 226
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
++Y + L+ +K K YLV +L + E ++FT + + T L +L G
Sbjct: 227 -SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGF 285
Query: 358 LRIKIKEYSGLQRQSVR 374
I I SG QS R
Sbjct: 286 RAIPI---SGQMTQSKR 299
>gi|386857046|ref|YP_006261223.1| DEAD/DEAH box helicase [Deinococcus gobiensis I-0]
gi|380000575|gb|AFD25765.1| DEAD/DEAH box helicase-like protein [Deinococcus gobiensis I-0]
Length = 599
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 137/324 (42%), Gaps = 72/324 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P L L GI+ P+Q E++ L RDL + TG+GKTL++ALPI+Q L
Sbjct: 9 PELAARLAERGITEASPIQA----ESLPHTLQGRDLIGRARTGTGKTLAFALPIIQNLEP 64
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
S R RA+VV PTR+LA QV D F+ L+ G
Sbjct: 65 SRERSRLPRAIVVAPTRELAKQVADEFS--KSGANLTTVTVYG----------------- 105
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
G Y P++ L+ VD++V TPGRL+DH+ RG L + Y V+DE D +L
Sbjct: 106 --GASYAPQE--NALRRGVDVVVGTPGRLIDHLE--RGNLDLSAVQYAVLDEADEMLSVG 159
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+ + T+L+ T P R M+ S
Sbjct: 160 FADAIETILEKT-------------------------------------PEGRQT-MLFS 181
Query: 274 ATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
ATL D N+L++ L PL + GE + + + +E K+ + + L LL
Sbjct: 182 ATLNGDINRLSRKYLRDPLTVDMVGEGKSQAAQTVEHLKVRV-GRSRTRVLADLLTVYNP 240
Query: 333 EKCIVFTSSVESTHRLCTLLNHFG 356
EK IVFT + L L H G
Sbjct: 241 EKAIVFTRTKREADELANELIHRG 264
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 129/305 (42%), Gaps = 60/305 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ ++ +I L RD+ + TGSGKT ++ALPI+Q L + + LV+ PTR
Sbjct: 75 YKTPTSIQARSIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPFFGLVLAPTR 133
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ + L + VG + + L K+P
Sbjct: 134 ELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAIALGKKPH------------------ 175
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L+
Sbjct: 176 ---IIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK-------- 224
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
F+P RR + SAT++ L + L P
Sbjct: 225 -------FIPRE-------RRT----------------YLFSATMSSKVESLQRASLRDP 254
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
++ +Y+ L + + K K YL+ L+ + I+FT +V R+ L
Sbjct: 255 ARVSVSSNKYQTVSTLLQHYVFIPHKRKDTYLIYLVNEFAGKSIIIFTRTVFEAQRVAIL 314
Query: 352 LNHFG 356
L G
Sbjct: 315 LRTLG 319
>gi|440639047|gb|ELR08966.1| hypothetical protein GMDG_00584 [Geomyces destructans 20631-21]
Length = 527
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 73/347 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP---IV 91
L P+ A+ MG ++L P+Q Q++I P L RD+ + TGSGKTL++ LP ++
Sbjct: 64 LSPKTAAAIAEMGFTTLTPIQ----QKSIPPILAGRDVLGAAKTGSGKTLAFLLPAIEMM 119
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + +VV PTR+LALQ+ V I + G+ +G ++ + E ++L
Sbjct: 120 QDLRFKPRNGTGVIVVSPTRELALQMFGVAREIMGTHSQTCGIVMGGANRSAEATKL--- 176
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
+ +++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 177 ------------------ATGINLLIATPGRLLDHLQNTKGFVYKNLRMLVIDEADRILD 218
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + ++++ LP + R+ +
Sbjct: 219 AGFEDEMRAIVKI---------------LPES-------RQTA----------------L 240
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKL--KPLYLVALL 327
SAT T LA++ L PL++ ET++ E LE ++C S+L + L+ V
Sbjct: 241 FSATQTTKVEDLARVSLRPGPLYVNVEEETKHSTVEGLEQGYIVCPSELRFRLLFTVLKK 300
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS LLN+ + + + G Q+Q R
Sbjct: 301 HLAKKKKIIVFVSSCNCVKYYEELLNY---IDLPVLALHGQQKQQKR 344
>gi|113969505|ref|YP_733298.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113884189|gb|ABI38241.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 409
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 70/328 (21%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L +L L +G P+Q+ E I L ++D+ + TG+GKT ++ALP++Q
Sbjct: 7 SLHSQLVNTLAELGYQQPTPIQI----EAIPAILAKQDVMAGAQTGTGKTAAFALPVLQQ 62
Query: 94 L-----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
L S A + +RALV++PTR+LA+QV+ F A + +G+A G SI
Sbjct: 63 LLLDNQSQDAPKDIRALVLVPTRELAVQVQQSFGKYAKGTDIRIGIAYGGVSI------- 115
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
E E ++ +D+L+ATPGRL+DH+ L+HL LV DE DR
Sbjct: 116 --------------EAQQAEFKAGIDVLIATPGRLLDHLRQG-ALNLKHLSVLVFDEADR 160
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L + + VL+ + + A T S FG K + R P+L+
Sbjct: 161 MLDMGFMDEIKAVLKQVPAQRQTLLFSA-TLDDSIFGFSKNLLR-----------EPKLI 208
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 328
++ R ++E +S K ++ L++
Sbjct: 209 EVA---------------------------KRNTTAAQVEQRVYAIDSDRKTEFVSHLVR 241
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFG 356
S ++ ++F+ + + +L T LN G
Sbjct: 242 SKNWQQVLIFSRTKQGVDKLTTQLNQLG 269
>gi|395506322|ref|XP_003757483.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Sarcophilus
harrisii]
Length = 715
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 97/326 (29%)
Query: 56 VAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLP 109
+V +++I P L E RD + S TGSGKTL+Y +P+VQ+L +R R ALV++P
Sbjct: 152 TSVQKQSI-PSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKLRVQRSDGPYALVLVP 210
Query: 110 TRDLALQVKD-VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
TR+LALQ D V + P + G+ +G E + L K
Sbjct: 211 TRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK------------------ 252
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
++IL++TPGRL+DHI +T+ + +L++DE DR+L ++ + +L S+
Sbjct: 253 ---GINILISTPGRLVDHIKSTKNIHFSRIQWLIIDEADRILDLGFEKDITVILNAINSE 309
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
E R + ++LSATLT+ +LA + L
Sbjct: 310 CEKRQN-----------------------------------VLLSATLTEGVARLADISL 334
Query: 289 HHPLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYL 323
H+P+ ++ + + +PE+L+ + + SKLK + L
Sbjct: 335 HNPVSISVSDETCDQHIKGCKAARGDGHLQTSAEPDSFAVPEKLQQHVTLVPSKLKLVTL 394
Query: 324 VALLQSLGE------EKCIVFTSSVE 343
A + LG+ +K IVF SS E
Sbjct: 395 AAFI--LGKCEFETNQKLIVFFSSCE 418
>gi|254975780|ref|ZP_05272252.1| ATP-dependent RNA helicase [Clostridium difficile QCD-66c26]
gi|255650694|ref|ZP_05397596.1| ATP-dependent RNA helicase [Clostridium difficile QCD-37x79]
gi|260687441|ref|YP_003218575.1| ATP-dependent RNA helicase [Clostridium difficile R20291]
gi|260213458|emb|CBE05139.1| ATP-dependent RNA helicase [Clostridium difficile R20291]
Length = 497
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 31/190 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT+S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTVSFAIPLCENI 65
Query: 95 SNRAVRC--LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ V C ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 N---VDCNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR- 121
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V I+VATPGR++DHIN LE++ YLV+DE D++ +
Sbjct: 122 --------------------VHIVVATPGRILDHINKG-SIKLENVKYLVIDEADKMFNK 160
Query: 213 AYQAWLPTVL 222
+ + +L
Sbjct: 161 GFVEQMEKIL 170
>gi|449545829|gb|EMD36799.1| hypothetical protein CERSUDRAFT_114703 [Ceriporiopsis subvermispora
B]
Length = 766
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 65/277 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAP 126
+D+ + TGSGKTL++ +P+++ L R L AL++ PTR+LA+Q+ DV +I
Sbjct: 48 KDVLGAARTGSGKTLAFLIPVLEILYRRKWGPQDGLGALIISPTRELAVQIFDVLRSIGG 107
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
S GL +G ++ DE L S ++ILVATPGRL+ H
Sbjct: 108 YHSFSAGLVIGGKNVKDERDRL----------------------SKMNILVATPGRLLQH 145
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
++ T GF ++L LV+DE DR+L ++ L +L + LP + +
Sbjct: 146 MDQTIGFECDNLQVLVLDEADRILDMGFKRTLSALL---------------SHLPKSRQT 190
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LP 304
L + SAT T+ LA+L L P+++ E + P
Sbjct: 191 L-----------------------LFSATQTESVADLARLSLKDPVYVGVKEAHNEGATP 227
Query: 305 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
+ LE + ++CE K L + ++S + K +VF SS
Sbjct: 228 KGLEQHYVVCELDKKLDILWSFIKSHLQNKTLVFMSS 264
>gi|323508819|dbj|BAJ77303.1| cgd4_3180 [Cryptosporidium parvum]
gi|323510507|dbj|BAJ78147.1| cgd4_3180 [Cryptosporidium parvum]
Length = 441
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 61/284 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++TI L RD+ + TGSGKT S+ +PI+Q L + V + A+++ PTR+L +Q+
Sbjct: 54 IQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQRLLDDQVP-MYAVILAPTRELCVQI 112
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F+A + L + VG + + L K+P I+V
Sbjct: 113 SEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH---------------------IIV 151
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A+PGRL+DH+ T+GF + + +LV+DE DRLL ++ L +++ S NR +
Sbjct: 152 ASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVE---SSPRNR----T 204
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL ++ L +P+ +
Sbjct: 205 TYL-------------------------------FSATMTTKVAKLQKISLSNPIKICV- 232
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
T+Y L Y + K K Y + +LQ+LG+ I+F ++
Sbjct: 233 NTKYDTAANLMQYYMFIPFKYKWSYFIGMLQNLGQYTGIIFCNT 276
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 63/301 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
+ I L ++D+ + TGSGKT ++A+PI+Q L ++ R AL++ PTR+LALQVK +
Sbjct: 33 KAIPAALRKKDIVGLAETGSGKTAAFAIPILQDLLSKP-RHNFALILTPTRELALQVKCL 91
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F + GL V VG + D++ +L KR K ++V TP
Sbjct: 92 FMELGDKFGLKVVCLVGGQHVEDQVRDL-KRLKFH-------------------VIVGTP 131
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GR++ H+ T+ L H+ Y V+DE D++L + ++ L ++
Sbjct: 132 GRVVYHLENTKELRLNHVRYFVLDEADQMLEDTFEQQLAFIIT----------------- 174
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
K +P + SAT+TQ+ +K+ ++ P+ L ++
Sbjct: 175 ---------------------KLHPNKQTFLYSATMTQNVDKIRKVCTKSPVILEVS-SK 212
Query: 301 YKLPERLESYKLICESKLKPLYLVALL---QSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
Y ++L+ + K K YL+ LL +S + + I+FTS+ + R+ +L +
Sbjct: 213 YSKVDKLDHAFVFIPDKEKDFYLIYLLLSSKSADKSRSIIFTSTWRESFRIVAMLKSLAD 272
Query: 358 L 358
+
Sbjct: 273 V 273
>gi|66357446|ref|XP_625901.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226956|gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
Length = 446
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 61/284 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++TI L RD+ + TGSGKT S+ +PI+Q L + V + A+++ PTR+L +Q+
Sbjct: 59 IQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQRLLDDQVP-MYAVILAPTRELCVQI 117
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F+A + L + VG + + L K+P I+V
Sbjct: 118 SEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH---------------------IIV 156
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A+PGRL+DH+ T+GF + + +LV+DE DRLL ++ L +++ S NR +
Sbjct: 157 ASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVE---SSPRNR----T 209
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L SAT+T KL ++ L +P+ +
Sbjct: 210 TYL-------------------------------FSATMTTKVAKLQKISLSNPIKICV- 237
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
T+Y L Y + K K Y + +LQ+LG+ I+F ++
Sbjct: 238 NTKYDTAANLMQYYMFIPFKYKWSYFIGMLQNLGQYTGIIFCNT 281
>gi|449019575|dbj|BAM82977.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 715
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 72/351 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D LP +P L+ ++ MG + + +Q I L RD+ ++ TGSGKTL++ +
Sbjct: 212 FDSLPLSEPTLR-GIEEMGFARMTEIQA----RAIPLALSGRDILASARTGSGKTLAFLI 266
Query: 89 PIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 145
PIV+ L A+++ PTR+LA+Q+ V +A + + +G ++ E
Sbjct: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+LI + +ILVATPGRL+DH+ +TRGF EHL +LV+DE
Sbjct: 327 EKLI---------------------NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDE 365
Query: 206 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 265
DR L ++ + +L++ LP +
Sbjct: 366 ADRCLEIGFEEEMHEILRI---------------LPKTRQT------------------- 391
Query: 266 RLVKMVLSATLTQDPNKLAQLDLHH-PLFL-TTGETRYKLPERLESYKLICESKLKPLYL 323
M+ SAT T LA++ PL L E E L+ I S+ + L
Sbjct: 392 ----MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L+ +K IVF SS LLN+ + + + + G Q+QS R
Sbjct: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNY---IDVPVLDLHGKQKQSKR 495
>gi|347835985|emb|CCD50557.1| similar to ATP-dependent RNA helicase has1 [Botryotinia fuckeliana]
Length = 510
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 152/344 (44%), Gaps = 70/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
D +K +++M ++ +Q + I P L RD+ + TGSGKTLS+ +P V+ L
Sbjct: 42 DKTMKALVEDMKFETMTEIQ----RRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLH 97
Query: 96 N---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + +VV PTR+LALQ+ V I + G+ +G ++ E +L K
Sbjct: 98 SLRFKPRNGTGVIVVSPTRELALQIFGVAREIMAHHSQTYGIVMGGANRRAEAEKLAK-- 155
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 156 -------------------GVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEA 196
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ D+ M+
Sbjct: 197 GFEDEMKQIVKVLPKDDRQ-------------------------------------TMLF 219
Query: 273 SATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ + + E LE ++C+S + L L + L+
Sbjct: 220 SATQTTKVEDLARISLRPGPLYINVDNKKEHSTVEGLEQGYVVCDSDKRFLLLFSFLKRN 279
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS LLN+ + + + + G Q+Q R
Sbjct: 280 LKKKIIVFFSSCACVKYHAELLNY---IDLPVLDLHGKQKQQKR 320
>gi|68468064|ref|XP_721871.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
gi|74656630|sp|Q5AK59.1|HAS1_CANAL RecName: Full=ATP-dependent RNA helicase HAS1
gi|46443813|gb|EAL03092.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
Length = 565
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 77/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LFE+ +P +K A++ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 109 LFENADFS-----EPTMK-AIKEMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGK 158
Query: 83 TLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++ L + ++ +++ PTR+LALQ+ V + + G+ +G +
Sbjct: 159 TLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGA 218
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
E ++L K V++LVATPGRL+DH+ T+ F +L
Sbjct: 219 DRRQEATKLAK---------------------GVNLLVATPGRLLDHLKNTQ-FVFSNLK 256
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ NENR S
Sbjct: 257 ALVIDEADRILEIGFEDEMKQIIKVL--PNENRQS------------------------- 289
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ E + LE ++C+S
Sbjct: 290 ----------MLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSD 339
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 340 KRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 393
>gi|390604200|gb|EIN13591.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 576
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 72/339 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL+ MG + + P+Q +++I P L +D+ + TGSGKTL++ +P ++ L +
Sbjct: 39 ALKEMGFTHMTPIQ----EKSIPPLLTGKDVLGAARTGSGKTLAFLIPAIELLHRMKFKP 94
Query: 102 LRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
++V PTR+LALQ+ V + + G+ +G ++ E+ +L
Sbjct: 95 RNGTGVIIVSPTRELALQIFGVAKELMAHHPQTFGIVMGGANRKAEVDKL---------- 144
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
Q V++LVATPGRL DH+ T+GF +L LV+DE DR+L ++ +
Sbjct: 145 -----------QKGVNLLVATPGRLWDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEM 193
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++ + NENR S M+ SAT T
Sbjct: 194 KKIINMI--PNENRQS-----------------------------------MLFSATQTT 216
Query: 279 DPNKLAQLDLH-HPLFLTTG--ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 335
LA++ L PL + E + + Y ++C S + L L L+ ++K
Sbjct: 217 KVQDLARISLRPGPLLIDVDHQEATSTVSTLSQGY-VVCPSDRRFLLLFTFLKKNLKKKV 275
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 276 IVFFSSCNSVKYHAELLNY---IDVPVLDLHGKQKQQKR 311
>gi|442751645|gb|JAA67982.1| Putative atp-dependent rna helicase pitchoune [Ixodes ricinus]
Length = 589
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 152/339 (44%), Gaps = 73/339 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAV- 99
A++ MG + + +Q +TI P L E RD+ + TGSGKTL++ +P V+ LS
Sbjct: 112 AVKAMGFTQMTEIQA----KTI-PHLLEGRDMVAAAKTGSGKTLAFLIPAVELLSKLKFM 166
Query: 100 --RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 157
ALV+ PTR+LA+Q V + ++GL +G +S E ++L K
Sbjct: 167 PRNGTGALVIAPTRELAMQTFGVLQELLTHQNQTLGLIMGGTSRQSEANKLAK------- 219
Query: 158 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 217
V+ LVATPGRL+DH+ T F ++L L++DE DR+L ++
Sbjct: 220 --------------GVNFLVATPGRLLDHLQNTSEFVYKNLQCLIIDEADRILDIGFEEE 265
Query: 218 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 277
+ +L+L LP R M+ SATLT
Sbjct: 266 MKQILRL---------------LPK-----------------------RRQTMLFSATLT 287
Query: 278 QDPNKLAQLDLH-HPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKC 335
+ L ++ L PL++ E + + E LE ++C S + L L L+ ++K
Sbjct: 288 KKTEDLVKVALKSEPLYIGLDENKEQATVEGLEQGYVVCPSDKRFLLLFTFLKKNRKKKV 347
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 348 MVFFSSCLSVKYHHELLNY---IDLPVMSIHGKQKQAKR 383
>gi|195049350|ref|XP_001992703.1| GH24071 [Drosophila grimshawi]
gi|193893544|gb|EDV92410.1| GH24071 [Drosophila grimshawi]
Length = 925
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 46/287 (16%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
PV ++F ++ L +K + IS L VQ Q+ I L RD+ + S
Sbjct: 246 PVKETIFSGSKVESLGLHAHAVKNLKDLLSISQLTSVQ----QKAIPQVLAGRDVLVRSQ 301
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAA-IAPAVGLS 131
TGSGKTL+YALP+V+ L ++ R R AL+++PTR+LALQ ++F + P +
Sbjct: 302 TGSGKTLAYALPMVERLQSQLPRIKRTDGVLALIIVPTRELALQTYELFQKLVKPYTWIV 361
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 191
G +G S E + L K +++L+ TPGRL+DH+ T
Sbjct: 362 PGALLGGESRKSEKARLRK---------------------GINVLLGTPGRLVDHLLHTA 400
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
F L L +LV+DE DRLL Y+ V QL + ++ R D +
Sbjct: 401 SFRLSKLHFLVLDEADRLLELGYER---DVKQLVEAIDKQRTEDIEQ------------Q 445
Query: 252 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+ +E + + +++LSATLT +LA L L P+++ +
Sbjct: 446 KNEIEANVQINAPVAMQRLLLSATLTAQVQQLAGLTLKDPIYIDNSD 492
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 73/322 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
A+ ++G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 188 AISSLGFTKPTPIQAS----TIPVALLGKDIVGNAVTGSGKTAAFMIPMLERLLYREKGK 243
Query: 98 ---AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
A RCL ++LPTR+LA+Q +V + + L VG S+ + + L +RP
Sbjct: 244 RAAATRCL---ILLPTRELAVQCYEVGKRLGAHTDIQFCLLVGGLSLKAQEAALRQRP-- 298
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
D+++ATPGRL+DH+ + GF L+ L LV+DE DR+L E +
Sbjct: 299 -------------------DVVLATPGRLIDHVRNSVGFNLDSLDILVLDEADRMLSEGF 339
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L + I+ C P R M+ SA
Sbjct: 340 ADELTEI----------------------------IKAC---------PKSRQT-MLFSA 361
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T ++L ++ L+ P+ L R ++ + I + +P LVAL + + K
Sbjct: 362 TMTDSVDELIKMSLNKPVRLFVDPKRSTARGLIQEFVRIRKESDRPAMLVALCKQTYKHK 421
Query: 335 CIVFTSSVESTHRLCTLLNHFG 356
I+F S + H++ + + G
Sbjct: 422 VIIFVRSKKLAHQMRIVFSLLG 443
>gi|94984710|ref|YP_604074.1| DEAD/DEAH box helicase [Deinococcus geothermalis DSM 11300]
gi|94554991|gb|ABF44905.1| ATP-dependent RNA helicase DbpA [Deinococcus geothermalis DSM
11300]
Length = 591
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 140/329 (42%), Gaps = 77/329 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P L L GI+ P+Q E++ L +DL + TG+GKTL++ALPI+Q L
Sbjct: 9 PELAARLAERGITEASPIQA----ESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTA 64
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
S R RA+V+ PTR+LA QV + F+ P + S++
Sbjct: 65 PDGRGSRERGRLPRAIVIAPTRELAKQVAEEFSKSGPQL----------STVT------- 107
Query: 150 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDR 208
+ G Y P++ L+ VD++V TPGRL+DH+ RG L + Y V+DE D
Sbjct: 108 ----VYGGAAYGPQE--NALRRGVDVVVGTPGRLIDHLE--RGNLDLSAIQYAVLDEADE 159
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L + + T+LQ T P R
Sbjct: 160 MLSVGFADAIETILQQT-------------------------------------PAARQT 182
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALL 327
M+ SATL + ++LA+ L P+ + GE + + + +E K+ + + L LL
Sbjct: 183 -MLFSATLNDEIHRLARKYLREPVVVDLVGEGKSQAAQSVEHLKVKV-GRTRTRVLADLL 240
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
EK IVFT + L L H G
Sbjct: 241 TVYNPEKAIVFTRTKREADELANELIHRG 269
>gi|255101321|ref|ZP_05330298.1| ATP-dependent RNA helicase [Clostridium difficile QCD-63q42]
Length = 497
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENI 65
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
N ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 -NVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR--- 121
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
V I+VATPGR++DHIN RG LE++ YLV+DE D++ +
Sbjct: 122 ------------------VHIVVATPGRILDHIN--RGSIKLENVKYLVIDEADKMFNKG 161
Query: 214 YQAWLPTVL 222
+ + +L
Sbjct: 162 FVEQMEKIL 170
>gi|255307197|ref|ZP_05351368.1| ATP-dependent RNA helicase [Clostridium difficile ATCC 43255]
Length = 497
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENI 65
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
N ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 -NVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR--- 121
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
V I+VATPGR++DHIN RG LE++ YLV+DE D++ +
Sbjct: 122 ------------------VHIVVATPGRILDHIN--RGSIKLENVKYLVIDEADKMFNKG 161
Query: 214 YQAWLPTVL 222
+ + +L
Sbjct: 162 FVEQMEKIL 170
>gi|395324246|gb|EJF56690.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 83/333 (24%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P D+ F D P+ L K L+ + +Q ++I L +D+ +
Sbjct: 50 PSDLKAFADLPISDL------TKRGLKRAHFVDMTDIQ----SKSIPTSLKGKDVLGAAR 99
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ +P+++ L R L AL++ PTR+LA Q+ +V +I S GL
Sbjct: 100 TGSGKTLAFLIPVLEILYRRKWGPQDGLGALIITPTRELAAQIFEVLRSIGGYHSFSAGL 159
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G ++ DE L S ++ILVATPGRL+ H++ T GF
Sbjct: 160 IIGGKNLKDERERL----------------------SRMNILVATPGRLLQHMDQTIGFE 197
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
++L LV+DE DR+L +Q L +L + LP + +L
Sbjct: 198 CDNLQLLVLDEADRILDMGFQRTLAALL---------------SHLPKSRQTL------- 235
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL------FLTTGETRYKLPERLE 308
+ SAT TQ LA+L L P+ LT G T P+ LE
Sbjct: 236 ----------------LFSATQTQSVADLARLSLKDPVPVGIEETLTEGAT----PKALE 275
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
+ ++CE K L + ++S + K +VF SS
Sbjct: 276 QHYVVCELDKKLDVLWSFIKSHLQTKTLVFLSS 308
>gi|68467745|ref|XP_722031.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
gi|46443978|gb|EAL03256.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
Length = 569
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 77/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LFE+ +P +K A++ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 113 LFENADFS-----EPTMK-AIKEMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGK 162
Query: 83 TLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++ L + ++ +++ PTR+LALQ+ V + + G+ +G +
Sbjct: 163 TLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGA 222
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
E ++L K V++LVATPGRL+DH+ T+ F +L
Sbjct: 223 DRRQEATKLAK---------------------GVNLLVATPGRLLDHLKNTQ-FVFSNLK 260
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ NENR S
Sbjct: 261 ALVIDEADRILEIGFEDEMKQIIKVL--PNENRQS------------------------- 293
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ E + LE ++C+S
Sbjct: 294 ----------MLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSD 343
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 344 KRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 397
>gi|195393350|ref|XP_002055317.1| GJ19298 [Drosophila virilis]
gi|194149827|gb|EDW65518.1| GJ19298 [Drosophila virilis]
Length = 957
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 58/287 (20%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
PV ++F ++ L +K L + IS L VQ Q+TI L +D+ + S
Sbjct: 296 PVKETIFAGTKVESLGLHAHAVKNLLDLLSISQLTTVQ----QKTIPEVLAGKDVLVRSQ 351
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAA-IAPAVGLS 131
TGSGKTL+YALP+V+ L + R R AL+++PTR+LA+Q ++F + P +
Sbjct: 352 TGSGKTLAYALPVVERLQAQLPRIKRTDGVLALIIVPTRELAVQTYELFQKLVKPYTWIV 411
Query: 132 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 191
G +G S E + L K +++L+ TPGRL+DH+ T
Sbjct: 412 PGALLGGESRKSEKARLRK---------------------GINVLLGTPGRLVDHLLHTA 450
Query: 192 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 251
F L L +LV+DE DRLL Y+ V QL + +++R +
Sbjct: 451 SFKLSKLQFLVLDEADRLLELGYER---DVKQLVEAIDKHRAEEPQ-------------- 493
Query: 252 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+P + +++LSATLT +LA L L PL++ +
Sbjct: 494 ----------QPPVAMQRLLLSATLTAQVQQLAGLTLKEPLYIDNSD 530
>gi|126699799|ref|YP_001088696.1| ATP-dependent RNA helicase [Clostridium difficile 630]
gi|115251236|emb|CAJ69067.1| ATP-dependent RNA helicase [Clostridium difficile 630]
Length = 497
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENI 65
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
N ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 -NVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR--- 121
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
V I+VATPGR++DHIN RG LE++ YLV+DE D++ +
Sbjct: 122 ------------------VHIVVATPGRILDHIN--RGSIKLENVKYLVIDEADKMFNKG 161
Query: 214 YQAWLPTVL 222
+ + +L
Sbjct: 162 FVEQMEKIL 170
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 74/316 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVK 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q+
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ F A+ + L + VG + L KRP ++VA
Sbjct: 107 EQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------VIVA 145
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+
Sbjct: 146 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE--------------- 190
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
+ P R + SAT+T+ KL + L +P+ +
Sbjct: 191 ----------------------EIPLERKT-FLFSATMTKKVRKLQRACLRNPVKIEAA- 226
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 358
++Y + L+ +K K YLV +L + E ++FT + + T L +L G
Sbjct: 227 SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFR 286
Query: 359 RIKIKEYSGLQRQSVR 374
I I SG QS R
Sbjct: 287 AIPI---SGQMTQSKR 299
>gi|238882849|gb|EEQ46487.1| hypothetical protein CAWG_04842 [Candida albicans WO-1]
Length = 569
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 77/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LFE+ +P +K A++ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 113 LFENADFS-----EPTMK-AIKEMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGK 162
Query: 83 TLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++ L + ++ +++ PTR+LALQ+ V + + G+ +G +
Sbjct: 163 TLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGA 222
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
E ++L K V++LVATPGRL+DH+ T+ F +L
Sbjct: 223 DRRQEATKLAK---------------------GVNLLVATPGRLLDHLKNTQ-FVFSNLK 260
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ NENR S
Sbjct: 261 ALVIDEADRILEIGFEDEMKQIIKVL--PNENRQS------------------------- 293
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ E + LE ++C+S
Sbjct: 294 ----------MLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSD 343
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 344 KRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 397
>gi|167391287|ref|XP_001739707.1| ATP-dependent RNA helicase DBP7 [Entamoeba dispar SAW760]
gi|165896508|gb|EDR23910.1| ATP-dependent RNA helicase DBP7, putative [Entamoeba dispar SAW760]
Length = 558
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 158/378 (41%), Gaps = 106/378 (28%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
+S+ PL+ L ++ + + + VQ A E L E+D + + TGS
Sbjct: 1 MSVLSKHPLNSLKINSRLIQTCEDKLQVKTYSHVQYAAIPEI----LQEKDCLVKAQTGS 56
Query: 81 GKTLSYALPIVQTLSNRAVRCLRA-----LVVLPTRDLALQVKDVFAAIAPAV-GLSVGL 134
GKTL+Y LP + + N+ + R L++ PTR+L QV DV + ++ GL +
Sbjct: 57 GKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTILTTSIIGLVPSI 116
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
VG S E + + K V+ILV TPGRL+DHIN+T
Sbjct: 117 VVGGDSKKSEKARIRK---------------------GVNILVGTPGRLLDHINSTNNLK 155
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
L+ + +L++DE DR+L ++ V+++ N+NR S
Sbjct: 156 LDKVEFLIMDEADRVLDAGFE---KDVIEIINHVNKNRTS-------------------- 192
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------------------TT 296
+++SATLT+ KL+ L L +P+F+
Sbjct: 193 ---------------ILVSATLTESVKKLSNLALKNPVFIDGDKRENAKERKKLKLIKEN 237
Query: 297 GETRYK---------------LPERLESYKLICESKLKPLYLVALLQSLGEE----KCIV 337
G ++ K LP L+ Y ++ K + YL+A L++ +E K IV
Sbjct: 238 GNSQEKTEKLINEEKIEDKLILPSTLKQYAMLITDKYRLAYLIACLRTFLKESIQRKIIV 297
Query: 338 FTSSVESTHRLCTLLNHF 355
F S ++S + +L +
Sbjct: 298 FFSCIQSVNYHYSLFSQL 315
>gi|351694587|gb|EHA97505.1| ATP-dependent RNA helicase DDX18 [Heterocephalus glaber]
Length = 668
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG +++ +Q ++I P L RDL + TGSG
Sbjct: 172 FEDTSFASLTNLVNENTLK-AIKEMGFTNMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 226
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P+++ L AL++ PTR+LA+Q V + + GL +G
Sbjct: 227 KTLAFLIPVIELIVKLKFMPRNGTGALILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 286
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 287 SNRSAEA---------------------QKLANGINIIVATPGRLLDHMQNTPGFMYKNL 325
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP IRR
Sbjct: 326 QCLVIDEADRILDVGFEEELKQIIKL---------------LP--------IRRQ----- 357
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 358 ----------TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPS 407
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 408 EKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 462
>gi|326934515|ref|XP_003213334.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Meleagris gallopavo]
Length = 482
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 76/331 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L + MG+S PVQ + I P L RD + TGSGKT ++ LP++Q L
Sbjct: 9 LAPWLVEQARQMGLSRPTPVQASC----IPPILQGRDCLGCAKTGSGKTAAFVLPVLQVL 64
Query: 95 SNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
S + CL V+ PTR+LA Q+ + F + +GL + VG + + EL ++P
Sbjct: 65 SEDPYGIFCL---VLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKP 121
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
+++ATPGRL DH+ ++ F+L+ L +LV+DE DRLL +
Sbjct: 122 ---------------------HVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQ 160
Query: 213 A---YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 269
+ A L +L+ +P+ R
Sbjct: 161 GCADFTADLEVILEA---------------VPA-----------------------RRQT 182
Query: 270 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 329
++ SATLT N+L L ++ P F + E + Y L+ E+ +K YLV L+Q+
Sbjct: 183 LLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEA-VKDAYLVHLIQT 241
Query: 330 LGEE----KCIVFTSSVESTHRLCTLLNHFG 356
+E I+FT + + L +L F
Sbjct: 242 FQDEHEDWSIIIFTKTCKECQILNMMLRKFS 272
>gi|348586043|ref|XP_003478780.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Cavia porcellus]
Length = 659
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 71/338 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRA 98
A++ MG +++ +Q ++I P L RDL + TGSGKTL++ +P+++ L
Sbjct: 182 AIKEMGFTNMTEIQ----HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMP 237
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
AL++ PTR+LA+Q V + + GL +G S+ + E
Sbjct: 238 RNGTGALILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEA------------- 284
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
Q+L + ++I+VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L
Sbjct: 285 --------QKLANGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 336
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+++L LP IRR M+ SAT T+
Sbjct: 337 KQIIKL---------------LP--------IRRQ---------------TMLFSATQTR 358
Query: 279 DPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + + + LE ++C S+ + L L L+ ++K +
Sbjct: 359 KVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLM 418
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS +S LLN+ + + + G Q+Q+ R
Sbjct: 419 VFFSSCKSVKYHYELLNY---IDLPVLAIHGKQKQNKR 453
>gi|443898399|dbj|GAC75734.1| ATP-dependent RNA helicase pitchoune [Pseudozyma antarctica T-34]
Length = 568
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 149/355 (41%), Gaps = 71/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E P L +P K A+ MG ++ VQ I P + +D+ + TGSGKTL
Sbjct: 48 ERQPFSTLDLSEPTRK-AIDTMGFKTMTEVQA----RCIPPLMAGKDVLGAAQTGSGKTL 102
Query: 85 SYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
S+ +P ++ L + A+++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 103 SFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANR 162
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
E +L Q V+++VATPGRL+DH+ T+GF +L L
Sbjct: 163 RAEADKL---------------------QKGVNLIVATPGRLLDHLQNTKGFVFSNLKAL 201
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
+DE DR+L ++ + ++ + +DN
Sbjct: 202 CIDEADRILEIGFEDEMRQIVNILPNDNRQ------------------------------ 231
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLK 319
M+ SAT T LA++ L PL++ + RLE ++CES +
Sbjct: 232 -------SMLFSATQTTKVQDLARISLRPGPLYINVHADLAASTVSRLEQGYVVCESDRR 284
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ +K IVF SS S LLN + + + + G Q+Q R
Sbjct: 285 FLLLFTFLKKNAGKKIIVFMSSCNSVKYHSDLLNF---IDVPVLDLHGKQKQQKR 336
>gi|19115400|ref|NP_594488.1| ATP-dependent RNA helicase Has1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1351666|sp|Q09916.1|HAS1_SCHPO RecName: Full=ATP-dependent RNA helicase has1
gi|1067204|emb|CAA91949.1| ATP-dependent RNA helicase Has1 (predicted) [Schizosaccharomyces
pombe]
Length = 578
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 159/363 (43%), Gaps = 76/363 (20%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
S D+ F D L ++ A++ MG ++ +Q + +I P L RD+ +
Sbjct: 84 STSDIEKFSDLQLSE------NIQKAIKEMGFETMTEIQ----KRSIPPLLAGRDVLGAA 133
Query: 77 PTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
TGSGKTL++ +P ++ L + +++ PTR+LALQ+ V + + G
Sbjct: 134 KTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFG 193
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
+ +G ++ E +L+K V++LVATPGRL+DH+ T+GF
Sbjct: 194 IVIGGANRRAEADKLVK---------------------GVNLLVATPGRLLDHLQNTKGF 232
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
+L LV+DE DR+L ++ + ++++ S+N
Sbjct: 233 VFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQ---------------------- 270
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYK 311
++ SAT T LA++ L PL++ + E LE
Sbjct: 271 ---------------TLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGY 315
Query: 312 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 371
++ +S + L L + L+ ++K IVF SS S + LLN+ + + + + G Q+Q
Sbjct: 316 VVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNY---IDLPVLDLHGKQKQ 372
Query: 372 SVR 374
R
Sbjct: 373 QRR 375
>gi|423205411|ref|ZP_17191967.1| hypothetical protein HMPREF1168_01602 [Aeromonas veronii AMC34]
gi|404624206|gb|EKB21046.1| hypothetical protein HMPREF1168_01602 [Aeromonas veronii AMC34]
Length = 416
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 30/202 (14%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L +G ++ P+Q I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLTELGYAAPTPIQA----RAIPVILAGRDLMAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
L + R +RALV++PTR+LA+QV + A GL+ L G SIA +++
Sbjct: 66 LLAQPQMESPRPIRALVLVPTRELAVQVAESVARYGQGTGLTSTLVYGGVSIAAQVA--- 122
Query: 150 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 209
LQ+ VD+L+ATPGRL+DH+ +LEHL +LV DE DR+
Sbjct: 123 ------------------ALQAGVDLLIATPGRLLDHLRQG-ALSLEHLSHLVFDEADRM 163
Query: 210 LREAYQAWLPTVLQLTRSDNEN 231
L + + +L+ +D +
Sbjct: 164 LDMGFMDEIKALLKQIPADRQT 185
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 63/304 (20%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L +D+ + TGSGKT ++ +PI+Q L + R L +L++ PTR+
Sbjct: 64 PTKIQI--EAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQR-LFSLILAPTRE 120
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
L+LQ+K+ ++ +GL V L +G + + +L K+P
Sbjct: 121 LSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQLSKKP-------------------- 160
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+V +PGR+ DH+ T+GF+LE + YLV+DE D+LL +D ++
Sbjct: 161 -HIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLS---------------TDFDDS 204
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
+ T LP KDK V + SAT+T KL ++ L P+
Sbjct: 205 LNKIITSLP------------------KDK-----VTYLYSATMTSKITKLQKVTLMKPI 241
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ T+Y E L L+ K K YL +L +VF ++ ++ ++ L
Sbjct: 242 QINVN-TKYHTSEHLIQKYLLIPLKFKYTYLACILWKYSTSTIMVFCNTCLTSQKVTLFL 300
Query: 353 NHFG 356
+
Sbjct: 301 QNLS 304
>gi|423088558|ref|ZP_17076937.1| putative ATP-dependent RNA helicase DbpA [Clostridium difficile
70-100-2010]
gi|357559444|gb|EHJ40892.1| putative ATP-dependent RNA helicase DbpA [Clostridium difficile
70-100-2010]
Length = 497
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENI 65
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
N ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 -NVDYNNVQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR--- 121
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
V I+VATPGR++DHIN RG LE++ YLV+DE D++ +
Sbjct: 122 ------------------VHIVVATPGRILDHIN--RGSIKLENVKYLVIDEADKMFNKG 161
Query: 214 YQAWLPTVL 222
+ + +L
Sbjct: 162 FVEQMEKIL 170
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 69/320 (21%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A MG + P+Q +++I L RD+ + TGSGKT S+ALP++Q L
Sbjct: 155 PSLVEACSRMGFKAPTPIQ----RQSIPVALTGRDIIGLAETGSGKTASFALPVLQKLLE 210
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ + L AL++ PTR+LA Q+ + F A+ +G+ + VG + + L K+P
Sbjct: 211 KP-QPLFALILTPTRELAYQISEQFEALGSTIGVKCCVIVGGMDMTTQAIALSKKP---- 265
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
IL+ATPGR++DH+ T+G+ L +L++DE DR+L ++
Sbjct: 266 -----------------HILIATPGRIVDHLENTKGY----LKFLIMDEADRILNMDFEE 304
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
+ +L+ + +T+L SAT+
Sbjct: 305 EVDKILKAIPKER-------NTYL-------------------------------YSATM 326
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T KL + L +P+ + T+Y+ L L ++ K YL L L I
Sbjct: 327 TSKVAKLQRASLRNPVKIEVA-TKYQTVGTLVQQYLFIPARFKDCYLTYALNQLAGNSTI 385
Query: 337 VFTSSVESTHRLCTLLNHFG 356
+FT + + R+ +L + G
Sbjct: 386 IFTMTCANAQRVALMLRNLG 405
>gi|451856883|gb|EMD70174.1| MAPK protein MPS1 [Cochliobolus sativus ND90Pr]
Length = 1051
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 68/325 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L R A++ MG + +Q Q+TI P L RD+ + TGSGKTL++ +P ++ L
Sbjct: 579 LSERTMSAIKEMGFEKMTEIQ----QKTIPPLLSGRDVLGAAKTGSGKTLAFLIPAIEML 634
Query: 95 SN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
S + +VV PTR+LALQ+ V + + G+ +G ++ + E
Sbjct: 635 SQLRFKPRNGTGVIVVSPTRELALQIFGVARELMSNHSQTFGILIGGANRSAEA------ 688
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
++L+ +++++ATPGRL+DH++ T+GF ++L L++DE DR+L
Sbjct: 689 ---------------EKLRKGLNLIIATPGRLLDHLHNTQGFVFKNLRSLIIDEADRILE 733
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + +++++ L T R+ M+
Sbjct: 734 VGFEDEMRSIIKI----------------------LPTERQT----------------ML 755
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ + + LE ++C+S + L + L+
Sbjct: 756 FSATQTTKVEDLARISLKPGPLYINVDYRAEHSTVQGLEQGYVLCDSDTRFRLLFSFLKK 815
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNH 354
++K IVF SS S LLN+
Sbjct: 816 HQKKKVIVFLSSCASVDFYSELLNY 840
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 77/350 (22%)
Query: 40 KVALQNM--------GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
+V+ Q+M G+SSL F + +TI L +D+ + TGSGKT ++ +PI
Sbjct: 230 QVSFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVALLGKDIVGAAVTGSGKTAAFVVPI 289
Query: 91 VQTLSNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
++ L R + R L++ PTR+LA+Q +V IA +++ L VG S+ + EL
Sbjct: 290 LERLVYRPKKIPTSRVLIICPTRELAMQCHNVAKRIAAFTDITLCLCVGGLSLKVQEQEL 349
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
KRP DI++ATPGR +DH+ ++GF+++++ +V+DE DR
Sbjct: 350 RKRP---------------------DIIIATPGRFIDHVRNSQGFSVDNIEIMVIDEADR 388
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L + + L +++L C P R
Sbjct: 389 MLEDGFADELNEIVKL----------------------------C---------PKSRQT 411
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI--CESKLKPLYLVAL 326
M+ SAT+T+ + L +L L+ P+ + + ++ + + +L+P LV +
Sbjct: 412 -MLFSATMTEKVDDLVRLSLNRPVRIFVDAKKATAKRLVQEFIRVRPQREQLRPAMLVHI 470
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG--LQRQSVR 374
++ + I+F + H++ + FG + + E G Q Q VR
Sbjct: 471 CKTFFHRRVIIFFRNKAFAHKMRII---FGLVGLNATEIHGSLSQEQRVR 517
>gi|336116856|ref|YP_004571623.1| ATP-dependent RNA helicase [Microlunatus phosphovorus NM-1]
gi|334684635|dbj|BAK34220.1| putative ATP-dependent RNA helicase [Microlunatus phosphovorus
NM-1]
Length = 737
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 99/188 (52%), Gaps = 31/188 (16%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--N 96
L ALQ GI+ FP+Q A TI L RD+ TGSGKTL + LP++ LS N
Sbjct: 318 LVAALQAGGITEPFPIQAA----TIPDALAGRDVLGRGKTGSGKTLGFGLPMITNLSGSN 373
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
C RALV++PTR+LALQV DV A +A GL++ L G
Sbjct: 374 APSGCARALVLVPTRELALQVADVLAPLARIEGLNLTLVAG------------------- 414
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
G+ Y P+ L+ + VDI+VATPGRL+D ++ L + +V+DE D + A
Sbjct: 415 GMAYGPQ--LKAFERGVDIVVATPGRLIDLMDQG-AADLTRVEVVVLDEADHM---ADLG 468
Query: 217 WLPTVLQL 224
++P V Q+
Sbjct: 469 FMPAVTQI 476
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 61/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L +D+ + TGSGKT ++ALPI+Q L ++ + ALV+ PTR+LA+Q+
Sbjct: 41 IQAQSIPQALQGKDVIGLAQTGSGKTGAFALPILQELLDKP-QAFFALVLSPTRELAIQI 99
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ +G+ + VG + + +L KRP ++V
Sbjct: 100 AEQFEALGAGIGVKTAVLVGGIDMMAQSIQLGKRPH---------------------VVV 138
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
TPGR++DH+ T+GFTL+ L L +DE DRLL ++ + +L++ D
Sbjct: 139 GTPGRVVDHLTNTKGFTLKQLQVLCLDEADRLLNLDFEQEIDQILKVVPRD--------- 189
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
RR + SAT+T KL + L +P+ +
Sbjct: 190 -------------RRT----------------QLFSATMTSKVAKLQRACLRNPVKVEV- 219
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y + L+ L +K K Y+ L L +VFT + + T +L + + G
Sbjct: 220 SAKYSTVDSLKQNYLFIPAKHKDCYVNYLFNELSSSTMMVFTRTCDQTRKLALVARNLG 278
>gi|156044094|ref|XP_001588603.1| hypothetical protein SS1G_10150 [Sclerotinia sclerotiorum 1980]
gi|154694539|gb|EDN94277.1| hypothetical protein SS1G_10150 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 70/344 (20%)
Query: 36 DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
D +K ++M ++ +Q + I P L RD+ + TGSGKTLS+ +P V+ L
Sbjct: 105 DKTMKALTEDMKFDTMTEIQ----RRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLH 160
Query: 96 N---RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ + +VV PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 161 SLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVMGGANRRAEAEKLVK-- 218
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L
Sbjct: 219 -------------------GVNLLIATPGRLLDHLQNTQGFIFKNLKALVIDEADRILEA 259
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ + ++++ D+ M+
Sbjct: 260 GFEDEMKQIVKVLPKDDRQ-------------------------------------TMLF 282
Query: 273 SATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSL 330
SAT T LA++ L PL++ + + E LE ++C+S + L L + L+
Sbjct: 283 SATQTTKVEDLARISLRPGPLYINVDNKKEHSTVEGLEQGYVVCDSDKRFLLLFSFLKRN 342
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS LLN+ + + + + G Q+Q R
Sbjct: 343 LKKKIIVFFSSCACVKYHAELLNY---IDLPVLDLHGKQKQQKR 383
>gi|12860207|dbj|BAB31877.1| unnamed protein product [Mus musculus]
Length = 660
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG + +Q ++I P L RDL + TGSG
Sbjct: 164 FEDTSFASLSNLVNENTLK-AIEEMGFKRMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 218
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P+++ L L++ PTR+LA+Q DV + + GL +G
Sbjct: 219 KTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFDVLKELMTHHVHTYGLIMGG 278
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E+ Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 279 SNRSAEV---------------------QKLLNGINIIVATPGRLLDHMQNTPGFMYKNL 317
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 318 QCLVIDEADRILDVGFEEELKQIIKL---------------LPA---------------- 346
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETR-YKLPERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 347 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPS 399
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 400 EKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 454
>gi|71020299|ref|XP_760380.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
gi|74700904|sp|Q4P6N0.1|HAS1_USTMA RecName: Full=ATP-dependent RNA helicase HAS1
gi|46100049|gb|EAK85282.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
Length = 517
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 153/355 (43%), Gaps = 71/355 (20%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E P L +P K A+ MG ++ VQ I P + +D+ + TGSGKTL
Sbjct: 48 ERQPFSILDLSEPTRK-AIDAMGFKTMTEVQA----RCIPPLMAGKDVLGAAQTGSGKTL 102
Query: 85 SYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
S+ +P ++ L + A+++ PTR+LALQ+ V + + G+ +G ++
Sbjct: 103 SFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGAN- 161
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+R + + +LQ V+++VATPGRL+DH+ T+GF +L L
Sbjct: 162 --------RRAEAD------------KLQKGVNLIVATPGRLLDHLQNTKGFVFSNLKAL 201
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
+DE DR+L ++ + ++++ +DN
Sbjct: 202 CIDEADRILEIGFEDEMRQIVKILPNDNRQ------------------------------ 231
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTT-GETRYKLPERLESYKLICESKLK 319
M+ SAT T LA++ L PL++ + RLE ++CES +
Sbjct: 232 -------SMLFSATQTTKVQDLARISLRPGPLYINVHADLAASTVSRLEQGYVVCESDRR 284
Query: 320 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L L+ +K IVF SS S LLN + + + + G Q+Q R
Sbjct: 285 FLLLFTFLKKNAGKKIIVFMSSCNSVKYHSDLLNF---IDVPVLDLHGKQKQQKR 336
>gi|241956021|ref|XP_002420731.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223644073|emb|CAX41816.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 556
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 77/357 (21%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
LFE+ L +P ++ A++ MG + + VQ +TI P L RD+ + TGSGK
Sbjct: 100 LFENADLS-----EPTMR-AIKEMGFTKMTKVQA----KTIPPLLAGRDVLGAAKTGSGK 149
Query: 83 TLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQS 139
TL++ +P ++ L + ++ +++ PTR+LALQ+ V + + G+ +G +
Sbjct: 150 TLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGA 209
Query: 140 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 199
E ++L K V++LVATPGRL+DH+ T+ F +L
Sbjct: 210 DRRQEATKLSK---------------------GVNLLVATPGRLLDHLKNTQ-FVFSNLK 247
Query: 200 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 259
LV+DE DR+L ++ + ++++ NENR S
Sbjct: 248 ALVIDEADRILEIGFEDEMKQIIKVL--PNENRQS------------------------- 280
Query: 260 KDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLT-TGETRYKLPERLESYKLICESK 317
M+ SAT T LA++ L PL++ E + LE ++C+S
Sbjct: 281 ----------MLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSD 330
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ L L + L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 331 KRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNY---IDLPVLDLHGKQKQQKR 384
>gi|67472869|ref|XP_652222.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56469043|gb|EAL46836.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709951|gb|EMD49114.1| ATP-dependent RNA helicase DBP7, putative [Entamoeba histolytica
KU27]
Length = 558
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 156/378 (41%), Gaps = 106/378 (28%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
+S+ PL+ L ++ + + + VQ A E L E+D + + TGS
Sbjct: 1 MSVLSKHPLNSLKINSRLIQTCEDKLQVKTYSHVQYAAIPEI----LQEKDCLVKAQTGS 56
Query: 81 GKTLSYALPIVQTLSNRAVRCLRA-----LVVLPTRDLALQVKDVFAAIAPAV-GLSVGL 134
GKTL+Y LP + + N+ + R L++ PTR+L QV DV + ++ GL +
Sbjct: 57 GKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTILTTSIIGLVPSI 116
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
VG S E + + K V+ILV TPGRL+DHIN+T
Sbjct: 117 VVGGDSKKSEKARIRK---------------------GVNILVGTPGRLLDHINSTNNLK 155
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
L+ + +L++DE DR+L ++ V+++ N+NR S
Sbjct: 156 LDKVEFLIMDEADRVLDAGFE---KDVIEIINHVNKNRTS-------------------- 192
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------- 297
+++SATLT+ KL+ L L +P+F+
Sbjct: 193 ---------------ILVSATLTESVKKLSNLALKNPVFIDGDKRENAKERKKLKLIKEE 237
Query: 298 ----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE----KCIV 337
E + LP L+ Y ++ K + YL+A L++ +E K IV
Sbjct: 238 ENNQEKTEKIINEDKIEDKLILPSTLKQYAMLITDKYRLAYLIACLRTFLKESIQRKIIV 297
Query: 338 FTSSVESTHRLCTLLNHF 355
F S ++S + +L +
Sbjct: 298 FFSCIQSVNYHYSLFSQL 315
>gi|255093167|ref|ZP_05322645.1| ATP-dependent RNA helicase [Clostridium difficile CIP 107932]
gi|255314909|ref|ZP_05356492.1| ATP-dependent RNA helicase [Clostridium difficile QCD-76w55]
gi|255517583|ref|ZP_05385259.1| ATP-dependent RNA helicase [Clostridium difficile QCD-97b34]
gi|260683781|ref|YP_003215066.1| ATP-dependent RNA helicase [Clostridium difficile CD196]
gi|384361412|ref|YP_006199264.1| ATP-dependent RNA helicase [Clostridium difficile BI1]
gi|260209944|emb|CBA63924.1| ATP-dependent RNA helicase [Clostridium difficile CD196]
Length = 497
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 31/190 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+ ++ +L+++G + + V +E I L ++L + S TGSGKT S+A+P+ + +
Sbjct: 10 LNEKILKSLKSLG----YNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENI 65
Query: 95 SNRAVRC--LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
+ V C ++AL+V+PTR+LALQVKD + I + G+ SI D+I+EL +R
Sbjct: 66 N---VDCNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR- 121
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
V I+VATPGR++DHIN LE++ YLV+DE D++ +
Sbjct: 122 --------------------VHIVVATPGRILDHINKG-SIKLENVKYLVIDEADKMFNK 160
Query: 213 AYQAWLPTVL 222
+ + +L
Sbjct: 161 GFVEQMEKIL 170
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 84/345 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL +G + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 193 ALTTLGFTKPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFTIPMLERLLYREKGK 248
Query: 98 AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 157
R LV++PTR+LA+Q +V +A + V L VG S+ + + L RP
Sbjct: 249 KAAATRCLVLVPTRELAVQCYEVGKKLAAHTDIEVALIVGGLSLKSQEATLRARP----- 303
Query: 158 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 217
DI++ATPGRL+DHI+ + FTL++L LV+DE DR+L + +
Sbjct: 304 ----------------DIVIATPGRLIDHIHNSPSFTLDNLDVLVLDEADRMLSDGFADE 347
Query: 218 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 277
L + I+ C P R M+ SAT+T
Sbjct: 348 LTEI----------------------------IKAC---------PKSRQT-MLFSATMT 369
Query: 278 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE--------SKLKPLYLVALLQS 329
++L ++ L P+ L + P+R + LI E K + LVAL
Sbjct: 370 DSVDELVRMSLDKPVRL------FVDPKRSTAKGLIQEFVRVRAGREKERSPLLVALCTR 423
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + I+F S + H+L + FG + +K E G Q R
Sbjct: 424 TFKTRVIIFVRSKKLAHQLRIV---FGLVGLKCGELHGDLSQEQR 465
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 157/359 (43%), Gaps = 74/359 (20%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
+ F+ D L P L A + +G P+Q AV I + RD+C + TGSG
Sbjct: 143 TTFDAKAFDELHLSRP-LTRACEALGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSG 197
Query: 82 KTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KT ++ LP ++ + +R R LV++PTR+LA+QV + ++A + L VG
Sbjct: 198 KTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGG 257
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S + + L RP +I+VATPGR++DH+ T F LE L
Sbjct: 258 LSANVQAAALRTRP---------------------EIVVATPGRVIDHVRNTHSFGLEDL 296
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
L++DE DRLL + + + +R+C
Sbjct: 297 ATLILDEADRLLEMGFLEEIKEI----------------------------VRQC----- 323
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLI-CE 315
P R ++ SATLT LA L + +P L + +T P+RL E KL +
Sbjct: 324 ----PKKRQT-LLFSATLTAGVEALASLSMKNPARL-SADTLGTTPKRLVEEVLKLKPNQ 377
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S K +L+A++ ++ I+F+ + + HRL ++ G IK E G Q+ R
Sbjct: 378 SAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIM---GLSDIKAGELHGDMTQTQR 433
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 157/359 (43%), Gaps = 74/359 (20%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
+ F+ D L P L A + +G P+Q AV I + RD+C + TGSG
Sbjct: 143 TTFDAKAFDELHLSRP-LTRACEALGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSG 197
Query: 82 KTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KT ++ LP ++ + +R R LV++PTR+LA+QV + ++A + L VG
Sbjct: 198 KTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGG 257
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S + + L RP +I+VATPGR++DH+ T F LE L
Sbjct: 258 LSANVQAAALRTRP---------------------EIVVATPGRVIDHVRNTHSFGLEDL 296
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
L++DE DRLL + + + +R+C
Sbjct: 297 ATLILDEADRLLEMGFLEEIKEI----------------------------VRQC----- 323
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLI-CE 315
P R ++ SATLT LA L + +P L + +T P+RL E KL +
Sbjct: 324 ----PKKRQT-LLFSATLTAGVEALASLSMKNPARL-SADTLGTTPKRLVEEVLKLKPNQ 377
Query: 316 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S K +L+A++ ++ I+F+ + + HRL ++ G IK E G Q+ R
Sbjct: 378 SAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIM---GLSDIKAGELHGDMTQTQR 433
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 144/325 (44%), Gaps = 48/325 (14%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ ALQ + +S +Q A L RD+ + TGSGKT ++ALPI+
Sbjct: 26 LGLIDPLLE-ALQQLSFTSPTDIQTAALPH----ALEGRDIIGVASTGSGKTAAFALPIL 80
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + R L A V+ PTR+LA Q+ + F A+ A+G+ VG + L K+
Sbjct: 81 QKLWDDP-RGLFACVIAPTRELAYQITEHFEALGSAMGVRCATVVGGIDEMSQAVALAKK 139
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
P ++VATPGRL H+ T+GF+L L +LV+DE DRLL
Sbjct: 140 PH---------------------VVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRLLD 178
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
+ L +L++ + +T+L F + T + ++R P V++
Sbjct: 179 MDFGPILDKILKVIPQER-------TTYL---FSATMTTKVAKLQRASLSNP----VRVE 224
Query: 272 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 331
+S K A L L L RY L Y L K + L+ L SL
Sbjct: 225 VS-------EKYAPLLLIRLLMRLRVSRRYSTVSTLLQYYLFIPLVQKDVNLMYLANSLA 277
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
I+FT +V RL ++ G
Sbjct: 278 SNSIIIFTRTVHDCQRLAIMMRTLG 302
>gi|126297926|ref|XP_001370951.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Monodelphis
domestica]
Length = 730
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 97/326 (29%)
Query: 56 VAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLP 109
+V +++I P L E RD + S TGSGKTL+Y +P+VQ+L R R ALV++P
Sbjct: 167 TSVQKQSI-PSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSRIQRSDGPYALVLVP 225
Query: 110 TRDLALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
TR+LALQ D + P + G+ +G E + L K
Sbjct: 226 TRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRK------------------ 267
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
++IL++TPGRL+DHI +T+ + +L++DE DR+L ++ + +L ++
Sbjct: 268 ---GINILISTPGRLVDHIKSTKNIHFRRIQWLIIDEADRILDLGFEKDITVILNAINAE 324
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
E R + ++LSATLT+ +LA + L
Sbjct: 325 CEKRQN-----------------------------------VLLSATLTEGVTRLADISL 349
Query: 289 HHPLFLT---------------TGET----------RYKLPERLESYKLICESKLKPLYL 323
H+P+ ++ GE+ + +PE+L+ + + SKLK + L
Sbjct: 350 HNPVSISVSDETCDQRTKGYKIAGESGPLRTSAEPDGFAVPEKLQQHVTLVPSKLKLVTL 409
Query: 324 VALLQSLG------EEKCIVFTSSVE 343
A + LG + K IVF SS E
Sbjct: 410 AAFI--LGRCEFEKDHKLIVFFSSCE 433
>gi|407038935|gb|EKE39381.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 558
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 156/378 (41%), Gaps = 106/378 (28%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
+S+ PL+ L ++ + + + VQ A E L E+D + + TGS
Sbjct: 1 MSVLSKHPLNSLKINSRLIQTCEDKLQVKTYSHVQYAAIPEI----LQEKDCLVKAQTGS 56
Query: 81 GKTLSYALPIVQTLSNRAVRCLRA-----LVVLPTRDLALQVKDVFAAIAPAV-GLSVGL 134
GKTL+Y LP + + N+ + R L++ PTR+L QV DV + ++ GL +
Sbjct: 57 GKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTILTTSIIGLVPSI 116
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
VG S E + + K V+ILV TPGRL+DHIN+T
Sbjct: 117 VVGGDSKKSEKARIRK---------------------GVNILVGTPGRLLDHINSTNNLK 155
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
L+ + +L++DE DR+L ++ V+++ N+NR S
Sbjct: 156 LDKVEFLIMDEADRVLDAGFE---KDVIEIINHVNKNRTS-------------------- 192
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------- 297
+++SATLT+ KL+ L L +P+F+
Sbjct: 193 ---------------ILVSATLTESVKKLSNLALKNPVFIDGDKRENAKERKKLKLIKEE 237
Query: 298 ----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE----KCIV 337
E + LP L+ Y ++ K + YL+A L++ +E K IV
Sbjct: 238 ENNQEKTEKIINEEKIEDKLILPSTLKQYAILITDKYRLAYLIACLRTFLKESIQRKIIV 297
Query: 338 FTSSVESTHRLCTLLNHF 355
F S ++S + +L +
Sbjct: 298 FFSCIQSVNYHYSLFSQL 315
>gi|426228752|ref|XP_004008460.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Ovis aries]
Length = 483
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 72/319 (22%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSN--RAVR 100
+ MG+ PVQ+ P + E C+ + TGSGKT ++ LPI+Q LS +
Sbjct: 18 RQMGLKQPTPVQLGCI-----PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIF 72
Query: 101 CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
CL V+ PTR+LA Q+ + F + +GL + VG + + EL ++P
Sbjct: 73 CL---VLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALELSRKP-------- 121
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
+++ATPGRL DH+ ++ F+++ + +LV+DE DRLL
Sbjct: 122 -------------HVVIATPGRLADHLRSSNTFSMKKIRFLVMDEADRLL---------- 158
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
E +D + L ++ R+ ++ SATLT
Sbjct: 159 ---------EQGCTDFTVDLEVILAAVPARRQT----------------LLFSATLTDTL 193
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE----KCI 336
+L L + P F + + E+L+ L+ K+K YLV L+Q+ +E I
Sbjct: 194 RELQGLATNQPFFW-EAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSII 252
Query: 337 VFTSSVESTHRLCTLLNHF 355
+FT++ ++ LC +L F
Sbjct: 253 IFTNTCKTCQILCMMLRKF 271
>gi|71896415|ref|NP_001026109.1| probable ATP-dependent RNA helicase DDX49 [Gallus gallus]
gi|53130312|emb|CAG31485.1| hypothetical protein RCJMB04_6o15 [Gallus gallus]
Length = 402
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 144/328 (43%), Gaps = 70/328 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L + MG+S PVQ + I P L RD + TGSGKT ++ LP++Q L
Sbjct: 9 LAPWLVEQARQMGLSRPTPVQAS----CIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVL 64
Query: 95 SN--RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 152
S + CL V+ PTR+LA Q+ + F + +GL + VG + + EL ++P
Sbjct: 65 SEDPYGIFCL---VLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKP 121
Query: 153 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 212
+++ATPGRL DH+ ++ F+L+ L +LV+DE DRLL +
Sbjct: 122 H---------------------VVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQ 160
Query: 213 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 272
++ +D L + +T ++
Sbjct: 161 GCADFI---------------ADLEVILEAVPARRQT--------------------LLF 185
Query: 273 SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
SATLT N+L L ++ P F + E + Y L+ E+ +K YLV L+Q+ +
Sbjct: 186 SATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEA-VKDAYLVHLIQTFQD 244
Query: 333 E----KCIVFTSSVESTHRLCTLLNHFG 356
E I+FT + + L +L F
Sbjct: 245 EHEDWSIIIFTKTCKECQILNMMLRKFS 272
>gi|395839602|ref|XP_003792676.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Otolemur garnettii]
Length = 675
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG +++ +Q ++I P L RDL + TGSG
Sbjct: 179 FEDTSFASLNDLVNENTLK-AIKEMGFTNMTEIQ----HKSIKPLLEGRDLLAAAKTGSG 233
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 234 KTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLVMGG 293
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 294 SNRSAEA---------------------QKLSNGINIIVATPGRLLDHMQNTPGFMYKNL 332
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 333 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 361
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 362 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPS 414
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS +S LLN+ + + + G Q+Q+ R
Sbjct: 415 EKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY---IDLTVLAIHGKQKQNKR 469
>gi|291391442|ref|XP_002712440.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Oryctolagus
cuniculus]
Length = 665
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED D L L + LK A++ MG +++ +Q +++ P L RDL + TGSG
Sbjct: 169 FEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ----HKSVRPLLEGRDLLAAAKTGSG 223
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 224 KTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 283
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 284 SNRSAEA---------------------QKLANGINIIVATPGRLLDHMQNTPGFMYKNL 322
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 323 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 351
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 352 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPS 404
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 405 EKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 459
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 135/317 (42%), Gaps = 76/317 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVK 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q+
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ F A+ + L + G + L KRP ++VA
Sbjct: 107 EQFEALGADISLRCAVLFGGIDRMQQTIALGKRPH---------------------VIVA 145
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+
Sbjct: 146 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE--------------- 190
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTG 297
PR K L SAT+T+ KL + L +P+ +
Sbjct: 191 ------------------------EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA 226
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 357
++Y + L+ +K K YLV +L + E ++FT + + T L +L G
Sbjct: 227 -SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGF 285
Query: 358 LRIKIKEYSGLQRQSVR 374
I I SG QS R
Sbjct: 286 RAIPI---SGQMTQSKR 299
>gi|216397600|gb|ACJ72832.1| DEAD box polypeptide 18 (predicted) [Oryctolagus cuniculus]
Length = 622
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED D L L + LK A++ MG +++ +Q +++ P L RDL + TGSG
Sbjct: 126 FEDTSFDSLTNLVNENTLK-AIKEMGFTNMTEIQ----HKSVRPLLEGRDLLAAAKTGSG 180
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 181 KTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 240
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 241 SNRSAEA---------------------QKLANGINIIVATPGRLLDHMQNTPGFMYKNL 279
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 280 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 308
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 309 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPS 361
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 362 EKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 416
>gi|225682474|gb|EEH20758.1| ATP-dependent RNA helicase has1 [Paracoccidioides brasiliensis
Pb03]
Length = 607
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+++M ++ +Q + I P L RD+ + TGSGKTL++ +P V+ LS +
Sbjct: 142 AIEDMKFETMTEIQ----RRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP 197
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 198 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLAK-------- 249
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF +L LV+DE DR+L ++ +
Sbjct: 250 -------------GVNLLIATPGRLLDHLQNTQGFIFRNLKALVIDEADRILEVGFEDEM 296
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ S++ M+ SAT T
Sbjct: 297 RQIVKILPSEDRQ-------------------------------------TMLFSATQTT 319
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + Y E LE +IC+S + L L + L+ ++K I
Sbjct: 320 KVEDLARISLRPGPLYINVDHRKEYSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKII 379
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 380 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 414
>gi|403350666|gb|EJY74800.1| DEAD/DEAH box helicase family protein [Oxytricha trifallax]
Length = 795
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 30/202 (14%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP 89
++ P + P+ L+ GIS LFPVQ + + +DL + TGSGKTL +ALP
Sbjct: 103 ENFPQITPKTVELLKKRGISGLFPVQYSSFNHIWN----RKDLIVRDLTGSGKTLGFALP 158
Query: 90 IVQTLSNR---AVRCLRALVVLPTRDLALQVKDVFAAIAPAVG-LSVGLAVGQSSIADEI 145
V+ L R ++A+V+ PTR+LALQV F A+ G +V G SI D+
Sbjct: 159 TVEYLRKNKLFGTRKIQAMVLAPTRELALQVSKEFNALKHFEGEYNVLTVYGGVSIDDQT 218
Query: 146 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 205
+L K VDI V T GR+MDH+ R F L L++DE
Sbjct: 219 YQLRK---------------------GVDIFVGTTGRVMDHM-ERRNFDFTDLKTLILDE 256
Query: 206 TDRLLREAYQAWLPTVLQLTRS 227
TD++L++ ++ + ++Q ++
Sbjct: 257 TDQMLKQGFKEDVERIMQTIKA 278
>gi|226289876|gb|EEH45360.1| ATP-dependent RNA helicase HAS1 [Paracoccidioides brasiliensis
Pb18]
Length = 607
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 150/338 (44%), Gaps = 70/338 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A+++M ++ +Q + I P L RD+ + TGSGKTL++ +P V+ LS +
Sbjct: 142 AIEDMKFETMTEIQ----RRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP 197
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+VV PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 198 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLAK-------- 249
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++L+ATPGRL+DH+ T+GF +L LV+DE DR+L ++ +
Sbjct: 250 -------------GVNLLIATPGRLLDHLQNTQGFIFRNLKALVIDEADRILEVGFEDEM 296
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
++++ S++ M+ SAT T
Sbjct: 297 RQIVKILPSEDRQ-------------------------------------TMLFSATQTT 319
Query: 279 DPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA++ L PL++ + Y E LE +IC+S + L L + L+ ++K I
Sbjct: 320 KVEDLARISLRPGPLYINVDHRKEYSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKII 379
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS LLN+ + + + + G Q+Q R
Sbjct: 380 VFFSSCNCVKYHAELLNY---IDLPVLDLHGKQKQQKR 414
>gi|209878840|ref|XP_002140861.1| ATP-dependent RNA helicase DBP6 [Cryptosporidium muris RN66]
gi|209556467|gb|EEA06512.1| ATP-dependent RNA helicase DBP6, putative [Cryptosporidium muris
RN66]
Length = 531
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 72/316 (22%)
Query: 30 DHLPCLDPRLKVALQNM-GISSLFPVQVAVWQETIG------PGLFERDLCINSPTGSGK 82
D L L +K ++++ G FP+Q V + L+ D+CI+ PTG GK
Sbjct: 33 DILKILHKNIKKGIKSINGFKKFFPIQYKVIPYILKGINKDRNSLYSSDICISVPTGEGK 92
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG----LSVGLAVGQ 138
TL Y +PI+ L +++ + L +L+++PTR+LA Q+K+ F + + + GQ
Sbjct: 93 TLCYVIPIINYLQSKSFQHLSSLILVPTRELANQIKNTFIIFSNKYKGPYPIRLMTLTGQ 152
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAV-DILVATPGRLMDHI---------- 187
SS + E LQ+L + DI++ TPGRL +H
Sbjct: 153 SSFSIE---------------------LQQLNHIIPDIIICTPGRLYEHYYHLCSLENLN 191
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 247
N +++ ++++DE DRLL ++Y WL + + + ++ + G L
Sbjct: 192 NNQIPKIFQYIRFIIIDEIDRLLSQSYNDWLDIINCINK----------QIYINTNNGEL 241
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLP 304
G+++ P L+ +LSAT+ KL +L L P++ T GE+ K+P
Sbjct: 242 G----MGIKK-------PLLI--LLSATMANIHYKLNELQLVRPIYFINSTHGES--KIP 286
Query: 305 ER-LESYKLICESKLK 319
+ ++ Y I E++ K
Sbjct: 287 SKIIQKYIKIGENEDK 302
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 68/325 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + +G+ S P+Q I P L RD + TGSGKTL++ALPI+Q L
Sbjct: 11 LNPWIIRQCATIGVRSPTPIQT----NCIPPILAGRDCIGAAKTGSGKTLAFALPILQKL 66
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
AL++ PTR+LA Q+ D FA I + L + VG + + +L ++P
Sbjct: 67 CEDPYGIF-ALILTPTRELAFQIADQFAVIGKVMNLRHCVIVGGMDMVVQGKDLARKPH- 124
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+VATPGRL DH+ + F L +LV+DE DRLL +
Sbjct: 125 --------------------IVVATPGRLADHLESCNTFNFNKLRFLVLDEADRLLGGHF 164
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ T+ Q + +N F SA
Sbjct: 165 DEQIKTIFQALPKERQNLF--------------------------------------FSA 186
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL---G 331
T+T KL + +F E+LE ++C +K YLV +++
Sbjct: 187 TITDTLEKLKDV-TGKDVFFYEAPAEVATVEQLEQNYVLCPKDVKDAYLVETIRTYRATN 245
Query: 332 EEKCIVFTSSVESTHRLCTLLNHFG 356
+ ++FT++ ++ L LN G
Sbjct: 246 DGNILIFTNTCKNCQVLSMTLNEVG 270
>gi|50547049|ref|XP_500994.1| YALI0B16896p [Yarrowia lipolytica]
gi|74660102|sp|Q6CEB8.1|DRS1_YARLI RecName: Full=ATP-dependent RNA helicase DRS1
gi|49646860|emb|CAG83247.1| YALI0B16896p [Yarrowia lipolytica CLIB122]
Length = 753
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 68/334 (20%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
GIS+L + + TI L +DL + TGSGKT +Y +P+++ L + V +
Sbjct: 266 GISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATK 325
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
+V+ PTR+L++QV DV +A V G+ GLAVG ++ + EL RP
Sbjct: 326 VVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTRP---------- 375
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
++++ATPGR +DH+ + F ++ + LV+DE DR+L E +Q L +L
Sbjct: 376 -----------EVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEIL 424
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 282
T LP +L + SAT+ +
Sbjct: 425 ---------------TLLPKKRQTL-----------------------LFSATMNSSISS 446
Query: 283 LAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLG-EEKCIVFTS 340
L QL L P+ + + ++ + ++ LKP L ++L+ + E++ I+F +
Sbjct: 447 LIQLSLSRPVRVMINPPKQAASGLVQEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVA 506
Query: 341 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
E+ HRL +L G ++I E G Q R
Sbjct: 507 RKETAHRLRIMLGLLG---VRIGELHGALSQEQR 537
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 73/339 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
A+Q +G S P+Q +TI L +D+ ++ TGSGKT ++ LPI++ L +
Sbjct: 196 AVQKLGFSQPTPIQA----KTIPLALNGKDILASASTGSGKTAAFLLPILERLLFRDSEY 251
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R +R LV+LPTR+LALQ + V +A ++ L VG S + EL KRP
Sbjct: 252 RAIRVLVLLPTRELALQCQSVLENLAQFSNITSCLIVGGLSNKAQEVELRKRP------- 304
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
D+++ATPGRL+DH+ G LE L L++DE DRLL ++
Sbjct: 305 --------------DVVIATPGRLIDHLLNAHGIGLEDLEILILDEADRLLDMGFK---- 346
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
D N+ D+ C P R M+ SATL +
Sbjct: 347 --------DEINKIVDS----------------C---------PTSRQT-MLFSATLNDE 372
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL---KPLYLVAL-LQSLGEEKC 335
LA+L L P+ + + +++ L+ + +S+ +P L++L +
Sbjct: 373 VKTLAKLSLQQPIRVQV-DALFQVASTLDQEFVKIKSQHLSDRPAILMSLCTRVFNTGGT 431
Query: 336 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
I+F S + HRLC + FG +K E G Q R
Sbjct: 432 IIFCRSKKEVHRLCII---FGLSDLKAAELHGNLSQEQR 467
>gi|409047652|gb|EKM57131.1| hypothetical protein PHACADRAFT_119388 [Phanerochaete carnosa
HHB-10118-sp]
Length = 780
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 75/328 (22%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P+++ +F D P+ L K L+ + +QV +++ L +D+ +
Sbjct: 48 PINLKVFADLPISDL------TKRGLKKASFVDMTDIQV----KSLPASLRGKDVLGAAR 97
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ P+++ L R L AL++ PTR+LA+Q+ +V +I S GL
Sbjct: 98 TGSGKTLAFLTPVLEVLYRRKWGPQDGLGALIISPTRELAVQIFEVLRSIGGYHTFSAGL 157
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G ++ DE L + ++ILVATPGRL+ H++ T GF
Sbjct: 158 IIGGKNLKDERDRLTR----------------------MNILVATPGRLLQHMDQTVGFE 195
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
++L LV+DE DR+L + L +L + LP + +L
Sbjct: 196 CDNLQMLVLDEADRILDMGFHKTLTALL---------------SHLPKSRQTL------- 233
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LPERLESYKL 312
+ SAT T+ LA+L L P++++T E +P+ LE + +
Sbjct: 234 ----------------LFSATQTKSVTDLARLSLKDPVYISTQEEEASGVMPKSLEQHHV 277
Query: 313 ICESKLKPLYLVALLQSLGEEKCIVFTS 340
+ + K L + +++ + K +VF S
Sbjct: 278 VVDLDKKLDVLWSFIKTHLQTKTLVFMS 305
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 74/321 (23%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVR 100
+ +GI PVQ E P + + C+ + TGSGKT ++ LP++Q LS +
Sbjct: 18 KQLGIHKPTPVQ-----ENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQKLSEDPYGIF 72
Query: 101 CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
CL V+ PTR+LA Q+ + F + +GL + VG + + SEL +P
Sbjct: 73 CL---VLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQASELSNQPH------- 122
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
++VATPGRL DHI ++ F++ + +L++DE DRLL + +
Sbjct: 123 --------------VVVATPGRLADHIRSSSTFSMSKIQFLIMDEADRLLEQGCTDFT-- 166
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
D T +P+ +T ++ SATLT
Sbjct: 167 -------------KDLETIMPALPAKRQT--------------------LLFSATLTDTL 193
Query: 281 NKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE----KC 335
+L + ++ P F + ETR + L+ ++ K+K YLV L+Q+ ++
Sbjct: 194 QELKNIAMNKPFFWESKSETR--TVDELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSI 251
Query: 336 IVFTSSVESTHRLCTLLNHFG 356
I+FT++ ++ L +L F
Sbjct: 252 IIFTNTCKNCQILTMMLQQFN 272
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 64/315 (20%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
G++SL F + +TI L +D+C + TGSGKT ++ +PI++ L R R
Sbjct: 230 GVTSLGFVKPTPIQSQTIPIALMGKDICGGAATGSGKTAAFVIPILERLLYRPRQTPSTR 289
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 163
L++ PTR+LA QV A ++ L VG S+ + EL +P
Sbjct: 290 VLILCPTRELAAQVHSAAVKFAAYTDITFCLCVGGLSLKTQEQELKLKP----------- 338
Query: 164 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
D++VATPGRL+DH+ T GF L+ LV+DE DR+L + + L +
Sbjct: 339 ----------DVVVATPGRLIDHVRNTSGFHLDACEILVMDEADRMLEDGFADELGEI-- 386
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 283
++ C P R M+ SAT+T + ++L
Sbjct: 387 --------------------------VKSC---------PKSRQT-MLFSATMTDNVDQL 410
Query: 284 AQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSS 341
++ LH+P+ L + ++ + I +++ + L+AL + + K I+F S
Sbjct: 411 IRMSLHNPVRLFVDRSNQAASRLIQEFVRIRQAREADRSAVLLALCKKSFKNKVIIFFRS 470
Query: 342 VESTHRLCTLLNHFG 356
+ H++ L G
Sbjct: 471 KAAAHQMKILFGLMG 485
>gi|198468121|ref|XP_002133938.1| GA27288 [Drosophila pseudoobscura pseudoobscura]
gi|198146263|gb|EDY72565.1| GA27288 [Drosophila pseudoobscura pseudoobscura]
Length = 917
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 52/247 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRD 112
V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R AL+++PTR+
Sbjct: 287 VQQKTIPHVLSGKDVLVRSQTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVALIIVPTRE 346
Query: 113 LALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
L +Q ++F + P + G +G S E + L K
Sbjct: 347 LVVQTYELFQKLVKPYTWIVPGSLLGGESRKSEKARLRK--------------------- 385
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
+++LV TPGRL+DH+ T F L L +LV+DE DRLL Y+ V QL + +++
Sbjct: 386 GINVLVGTPGRLVDHLLHTASFKLFRLQFLVLDEADRLLELGYER---DVKQLVEAIDKH 442
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
R +E +D+ P+L +++LSATLT +LA L L P
Sbjct: 443 R----------------------LEAQGQDEKLPQLQRLLLSATLTAQVQELAGLALSDP 480
Query: 292 LFLTTGE 298
L++ +
Sbjct: 481 LYIDNSD 487
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 62/301 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLPTRDLAL 115
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR+L +
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKSTWACVLAPTRELCV 114
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F + ++ L+ VG + + L K+P I
Sbjct: 115 QIGQQFEGLGASINLTTATIVGGLDMVTQAMALSKKPH---------------------I 153
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VA+PGRL+DH+ T+GF L+ + +LV+DE DRLL ++ L ++Q D +
Sbjct: 154 IVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ----- 208
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
TFL SAT+T ++L + L P+
Sbjct: 209 --TFL-------------------------------FSATMTNKVSQLQRASLTRPVKCE 235
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++ + + L + K K YL ALL ++F + + R+ T L H
Sbjct: 236 VAR-KFDVAKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHL 294
Query: 356 G 356
G
Sbjct: 295 G 295
>gi|323450950|gb|EGB06829.1| hypothetical protein AURANDRAFT_10453, partial [Aureococcus
anophagefferens]
Length = 511
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 31/208 (14%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
S+F + D LP D + AL+ MG+ L +Q + I P L RDL N+ TGS
Sbjct: 11 TSMFSETRFDSLPLTDG-TQAALKAMGLERLSKIQ----DKAIPPLLEGRDLLGNAKTGS 65
Query: 81 GKTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVKDVFAAIAPAV--GLSVGLA 135
GKTL++ +P+V+ L+ + L LV+ PTR+L+LQ+ V + G + GL
Sbjct: 66 GKTLAFLIPLVELLTKARFQQRSGLGGLVISPTRELSLQIYGVLRELLSVAKHGHTHGLV 125
Query: 136 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 195
+G ++ E L K G+C ILVATPGRL+DH+ T GF
Sbjct: 126 IGGANRRGEAERLGK------GVC---------------ILVATPGRLLDHLQNTSGFVF 164
Query: 196 EHLCYLVVDETDRLLREAYQAWLPTVLQ 223
++L V DE DR+L + ++ L +++
Sbjct: 165 KNLLMFVCDEADRILEQGFEDDLRGIVR 192
>gi|444513156|gb|ELV10279.1| ATP-dependent RNA helicase DDX18 [Tupaia chinensis]
Length = 551
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 78/380 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVW 59
+E + +P LP + FED L L + LK A++ MG +++ +Q
Sbjct: 150 DEKDENEVPSLPLGLT----GAFEDTSFASLSNLVNENTLK-AIKEMGFTNMTEIQ---- 200
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQ 116
++I P L RDL + TGSGKTL++ +P V+ L L++ PTR+LA+Q
Sbjct: 201 HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQ 260
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
V + + GL +G S+ + E Q+L + ++I+
Sbjct: 261 TFGVLKELMTHHVHTYGLIMGGSNRSAEA---------------------QKLANGINII 299
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L +++L
Sbjct: 300 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL------------ 347
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLT 295
LP IRR M+ SAT T+ LA++ L PL++
Sbjct: 348 ---LP--------IRRQ---------------TMLFSATQTRKVEDLARISLKKEPLYVG 381
Query: 296 TGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 354
+ + + LE ++C S+ + L L L+ ++K +VF SS +S LLN+
Sbjct: 382 VDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY 441
Query: 355 FGELRIKIKEYSGLQRQSVR 374
+ + + G Q+Q+ R
Sbjct: 442 ---IDLPVLAIHGRQKQNKR 458
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 63/288 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RDL TGSGKT ++ALPI+Q L R A V+ PTR+LA+Q+ + F A+ A+G
Sbjct: 56 RDLIGLGQTGSGKTGAFALPIIQALLEHR-RPFFACVMSPTRELAIQIAEQFEALGSAIG 114
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L + VG ++ + KRP I+V TPGRL+DH+
Sbjct: 115 LVCSVLVGGVDRMQQVLSIAKRPH---------------------IVVGTPGRLLDHLKD 153
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF+L + YLV+DE D+LL ++ L +L
Sbjct: 154 TKGFSLNKVKYLVLDEADKLLNLEFKESLDDIL--------------------------- 186
Query: 250 IRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 308
K P+ + L SAT+T+ +KL + L +P + ++Y + L+
Sbjct: 187 ------------KAIPKERRTYLFSATMTKKVSKLQRACLRNPAKVEV-SSKYSTVDTLK 233
Query: 309 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ K YLV L L ++F + EST L L + G
Sbjct: 234 QEWYFVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLG 281
>gi|295661021|ref|XP_002791066.1| ATP-dependent RNA helicase DBP7 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280993|gb|EEH36559.1| ATP-dependent RNA helicase DBP7 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 513
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVL 108
F + + I P L RD+ + TGSGKTL++ +P V+ LS + +VV
Sbjct: 141 FETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIVVS 200
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 201 PTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLAK------------------ 242
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
V++L+ATPGRL+DH+ T+GF +L LV+DE DR+L ++ + ++++
Sbjct: 243 ---GVNLLIATPGRLLDHLQNTQGFIFRNLKALVIDEADRILEVGFEDEMRQIVKI---- 295
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
LPS +D+ M+ SAT T LA++ L
Sbjct: 296 -----------LPS-----------------EDRQT-----MLFSATQTTKVEDLARISL 322
Query: 289 H-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + Y E LE +IC+S + L L + L+ ++K IVF SS
Sbjct: 323 RPGPLYINVDHRKEYSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 382
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + + G Q+Q R
Sbjct: 383 YHAELLNY---IDLPVLDLHGKQKQQKR 407
>gi|195165539|ref|XP_002023596.1| GL19832 [Drosophila persimilis]
gi|194105730|gb|EDW27773.1| GL19832 [Drosophila persimilis]
Length = 917
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 52/247 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRD 112
V Q+TI L +D+ + S TGSGKTL+YALP+V+ L + R AL+++PTR+
Sbjct: 287 VQQKTIPHVLSGKDVLVRSQTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVALIIVPTRE 346
Query: 113 LALQVKDVFAA-IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
L +Q ++F + P + G +G S E + L K
Sbjct: 347 LVVQTYELFQKLVKPYTWIVPGSLLGGESRKSEKARLRK--------------------- 385
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
+++LV TPGRL+DH+ T F L L +LV+DE DRLL Y+ V QL + +++
Sbjct: 386 GINVLVGTPGRLVDHLLHTASFKLFRLQFLVLDEADRLLELGYER---DVKQLVEAIDKH 442
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
R +E +D+ P+L +++LSATLT +LA L L P
Sbjct: 443 R----------------------LEAQGQDEKLPQLQRLLLSATLTAQVQELAGLALSDP 480
Query: 292 LFLTTGE 298
L++ +
Sbjct: 481 LYIDNSD 487
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 61/300 (20%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ Q++I L RD+ + TGSGKT ++ALPI+Q+L + R +L++ PTR+LA+Q
Sbjct: 44 AIQQKSIPEALQGRDVIGLAQTGSGKTGAFALPILQSLLDEP-RTYHSLILSPTRELAIQ 102
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ + A+ +G+ VG + + L KRP ++
Sbjct: 103 IAEQVEALGRGIGVRTATLVGGIEMTSQAIMLGKRPH---------------------VV 141
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V TPGR++DH+ T+GF L+ L LV+DE DRLL ++ + +L++ D +
Sbjct: 142 VGTPGRVVDHLENTKGFGLKALKVLVLDEADRLLNLDFEEEIDKILRVIPQDRRTQL--- 198
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
SAT+T KL + L P+ +
Sbjct: 199 -----------------------------------FSATMTSKVQKLQRACLRDPVKVEV 223
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y + L + L +K K Y L L IVF + + T +L + + G
Sbjct: 224 -SAKYSTVDSLRQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDQTRKLALIARNLG 282
>gi|90076578|dbj|BAE87969.1| unnamed protein product [Macaca fascicularis]
Length = 255
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 61/259 (23%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q+ +
Sbjct: 53 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQISEQ 111
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
F A+ ++G+ + VG + L K+P I++ATP
Sbjct: 112 FEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH---------------------IIIATP 150
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 151 GRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL 203
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300
SAT+T+ KL + L +P+ ++
Sbjct: 204 -------------------------------FSATMTKKVQKLQRAALKNPVKCAVS-SK 231
Query: 301 YKLPERLESYKLICESKLK 319
Y+ E+L+ Y + SK K
Sbjct: 232 YQTVEKLQQYYIFIPSKFK 250
>gi|194222171|ref|XP_001916624.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Equus caballus]
Length = 623
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG +++ +Q ++I P L RDL + TGSG
Sbjct: 127 FEDTSFASLTSLVNENTLK-AIKEMGFTNMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 181
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 182 KTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHIHTYGLIMGG 241
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 242 SNRSAEA---------------------QKLANGINIIVATPGRLLDHMQNTPGFMYKNL 280
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 281 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 309
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 310 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPS 362
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS +S LLN+ + + + G Q+Q+ R
Sbjct: 363 EKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY---IDLPVLAIHGKQKQNKR 417
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 62/301 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLPTRDLAL 115
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR+L +
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKLTWACVLAPTRELCV 114
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q+ F + ++ L+ VG + + L K+P I
Sbjct: 115 QIGQQFEGLGASINLTTATIVGGLDMVTQAMSLSKKPH---------------------I 153
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VA+PGRL+DH+ T+GF L+ + +LV+DE DRLL ++ L ++Q D +
Sbjct: 154 IVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ----- 208
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 295
TFL SAT+T ++L + L P+
Sbjct: 209 --TFL-------------------------------FSATMTNKVSQLQRASLTRPVKCE 235
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 355
++ + + L + K K YL ALL ++F + + R+ T L H
Sbjct: 236 VAR-KFDVAKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHL 294
Query: 356 G 356
G
Sbjct: 295 G 295
>gi|328856691|gb|EGG05811.1| hypothetical protein MELLADRAFT_43753 [Melampsora larici-populina
98AG31]
Length = 573
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 28/180 (15%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC---L 102
M +++ P+Q ++TI L +DL +S TGSGKTL Y +PI + L R +
Sbjct: 1 MSVTTPTPIQ----RQTIPLALLGKDLVCSSMTGSGKTLGYLVPIFERLMWRDKKGGGKT 56
Query: 103 RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
R +++ PTR+LA+QV V ++A L+ L VG ++ + +EL +RP
Sbjct: 57 RVMILTPTRELAVQVYQVGKSLARYTDLTFSLCVGGMNLRTQEAELRERP---------- 106
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
+I+V TPGR++DH+ TRGF+L+ L LV+DE DR+L E ++ L ++
Sbjct: 107 -----------EIVVGTPGRVIDHVRNTRGFSLDTLEILVIDEADRILEEGFRDELEEII 155
>gi|395334120|gb|EJF66496.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 552
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 155/352 (44%), Gaps = 71/352 (20%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
P L +P +K AL+ MG+ ++ +Q +++I P L +D+ + TGSGKTL++
Sbjct: 20 PFSELNLSEPTMK-ALKEMGLETMTTIQ----EKSIPPLLAGKDVLGAARTGSGKTLAFL 74
Query: 88 LPIVQTLSNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADE 144
+P V+ L + +++ PTR+LALQ+ +V + + G+ +G
Sbjct: 75 IPAVELLHRLKFKPRNGTGVIIISPTRELALQIFEVARELMQYHSQTFGIIMG------- 127
Query: 145 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 204
G E++ +LQ V++L+ATPGRL+DH+ T+GF +L LV+D
Sbjct: 128 ------------GATRKGEEI--KLQKGVNLLIATPGRLIDHLEGTKGFVFRNLKSLVID 173
Query: 205 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 264
E DR+L ++ + ++ NE R S
Sbjct: 174 EADRILEVGFEEQMKKIIATL--PNEGRQS------------------------------ 201
Query: 265 PRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLY 322
M+ SAT T LA++ L P+ + +T L ++C S + L
Sbjct: 202 -----MLFSATQTSKVTDLARISLRPGPILVDVDKTEDTSTVSTLTQGYVVCPSDRRFLL 256
Query: 323 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L+ ++K IVF SS S LLN+ + + + + G Q+Q R
Sbjct: 257 LFTFLKKNMKKKTIVFFSSCRSVKYHAELLNY---IDVPVLDLHGNQKQQKR 305
>gi|340519177|gb|EGR49416.1| predicted protein [Trichoderma reesei QM6a]
Length = 558
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 71/351 (20%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER 70
V+P +P+ ++ + + L + +K A+Q MG + + +Q + I P L +
Sbjct: 63 VIPTQSAPIVSTMADSQKFEDLKLSEKTMK-AIQEMGFTKMTNIQ----RSAIPPLLAGK 117
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDVFAAIAPA 127
D+ + TGSGKTL++ +P ++ LS+ + +VV PTR+LALQ+ V +
Sbjct: 118 DVLGAAKTGSGKTLAFLIPAIEILSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMKY 177
Query: 128 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 187
+ G+ +G ++ E+ +L K V++L+ATPGRL+DH+
Sbjct: 178 HSQTYGIVIGGANRRAEVEKLTK---------------------GVNLLIATPGRLLDHL 216
Query: 188 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 247
T+ F ++L L++DE DR+L ++ + ++++ NE+R +
Sbjct: 217 LNTQ-FVFKNLKSLIIDEADRILEVGFEDEMRQIVKVL--SNEDRQT------------- 260
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPE 305
M+ SAT T LA++ L PL++ E ++ +
Sbjct: 261 ----------------------MLFSATQTTKVEDLARISLRPGPLYINVDQEQQHSTVD 298
Query: 306 RLESYKLICESKLKPLYLVALLQSL--GEEKCIVFTSSVESTHRLCTLLNH 354
LE ++CE + L L + L+ + ++K IVF SS S LLN+
Sbjct: 299 GLEQGYVLCEGDERFLLLFSFLRKMQAKKKKVIVFFSSCNSVKYYAELLNY 349
>gi|189238701|ref|XP_968537.2| PREDICTED: similar to Rs1 CG2173-PA [Tribolium castaneum]
Length = 1657
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 73/352 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E +KK+ P + + VD+ E + P LK A+ +M P+Q +
Sbjct: 1080 KETRKKAAPNENFFET-VDLDT-EHASFYQMNLSRPLLK-AISDMKFVHPTPIQAS---- 1132
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVK 118
TI L RD+C + TG+GKT +Y LP ++ L R V R LV++PTR+L +QV
Sbjct: 1133 TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVPTRELGVQVY 1192
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V +A + +GLAVG + + + L K P DI++A
Sbjct: 1193 QVTKQLAQFSDIQIGLAVGGLDLKAQETILRKNP---------------------DIVIA 1231
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ +T F L+ + L++DE DR+L E + + +
Sbjct: 1232 TPGRLIDHLKSTPTFGLDSIEVLILDEADRMLDEYFAEQMKEI----------------- 1274
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTT 296
I++C R M+ SAT+T++ LA + L+ P LF+ +
Sbjct: 1275 -----------IKQCARTRQT----------MLFSATMTEEVESLAAVSLNKPVRLFVDS 1313
Query: 297 G-ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
E + L + + E + + L AL+ E C+VF + + HR
Sbjct: 1314 NREVAFGLRQEFVRIRQDKEGDREAI-LAALVCRTFREHCMVFVQTKKQAHR 1364
>gi|405953609|gb|EKC21239.1| Putative ATP-dependent RNA helicase DDX27 [Crassostrea gigas]
Length = 740
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 145/337 (43%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
L M + P+Q A TI L RDLC + TGSGKT+++ LPI++ L R
Sbjct: 182 GLGQMNFTKPTPIQTA----TIPIALLGRDLCACAVTGSGKTVAFMLPILERLMYRTQEE 237
Query: 101 -CLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R LV++PTR+LA+QV V +A + + L+ G I + + L +P
Sbjct: 238 AATRVLVLVPTRELAVQVHTVARQLAQYTNIEIVLSAGGLDIKAQEAALRMKP------- 290
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
DI++ATPGRL+DH++ + F+L ++ LV+DE DR+L E + +
Sbjct: 291 --------------DIVIATPGRLIDHLHNSPNFSLRNIEILVLDEADRMLDEYFAEQMN 336
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+ IR+C R M+ SAT+++
Sbjct: 337 EI----------------------------IRQCAQTRQ----------TMLFSATMSEA 358
Query: 280 PNKLAQLDLHHPL-FLTTGETRYKLPERLESYKLICESKLKPLYLVA-LLQSLGEEKCIV 337
LA + L P+ T L R E ++ + ++A L+ + CIV
Sbjct: 359 VQDLASVSLKQPVKIFVNQNTDVALGLRQEFIRIRPNREGDREAIIASLVSRTFRDHCIV 418
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F + + HR+ +L G L + + E G Q+ R
Sbjct: 419 FIQTKKQAHRMHIIL---GLLGVNVGELHGNLSQAQR 452
>gi|431894767|gb|ELK04560.1| ATP-dependent RNA helicase DDX18 [Pteropus alecto]
Length = 663
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG +++ +Q ++I P L RDL + TGSG
Sbjct: 167 FEDTSFASLSNLVNENTLK-AIKEMGFTNMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 221
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P V+ L L++ PTR+LA+Q V + + GL +G
Sbjct: 222 KTLAFLIPAVELIVKLKFMPRNGTGILILSPTRELAMQTFGVLKELMTHHVHTYGLVMGG 281
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 282 SNRSAEA---------------------QKLANGINIIVATPGRLLDHMQNTPGFMYKNL 320
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 321 QCLVIDEADRILDVGFEEELKQIIKL---------------LPT---------------- 349
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETRYKLP-ERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 350 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPS 402
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS +S LLN+ + + + G Q+Q+ R
Sbjct: 403 EKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNY---IDLPVLAIHGRQKQNKR 457
>gi|392560272|gb|EIW53455.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 791
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 66/305 (21%)
Query: 43 LQNMGISSLFPVQVAVWQ-ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--- 98
L N G+ V++ Q ++I L +D+ + TGSGKTL++ +P ++ L R
Sbjct: 63 LTNRGLKRAHFVKMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPALEILYRRKWGP 122
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
L AL++ PTR+LA+Q+ DV +I S GL +G ++ DE SE + R
Sbjct: 123 QDGLGALIISPTRELAVQIFDVLRSIGGYHSFSAGLVIGGKNLKDE-SERLAR------- 174
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
++ILVATPGRL+ H++ T GF ++L LV+DE DR+L +Q L
Sbjct: 175 --------------MNILVATPGRLLQHMDQTIGFECDNLQVLVLDEADRILDMGFQRTL 220
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
+L + LP + +L + SAT TQ
Sbjct: 221 TALL---------------SHLPKSRQTL-----------------------LFSATQTQ 242
Query: 279 DPNKLAQLDLHHPLFLTTGETRYK--LPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA+L L P+ + +T + P+ LE + ++CE K L + ++S + K +
Sbjct: 243 SVADLARLSLKDPVSVGIDQTNTEGATPKALEQHYVLCELDKKLDVLWSFIKSHLQTKTL 302
Query: 337 VFTSS 341
VF SS
Sbjct: 303 VFMSS 307
>gi|307109210|gb|EFN57448.1| hypothetical protein CHLNCDRAFT_142930 [Chlorella variabilis]
Length = 576
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 150/341 (43%), Gaps = 73/341 (21%)
Query: 40 KVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
K +Q +G ++ VQ TI L RD+ + TGSGKTL++ +P V+ L RA
Sbjct: 115 KRGIQELGFVNMTEVQA----RTIPQLLVGRDVLGAAKTGSGKTLAFLIPCVELLY-RAK 169
Query: 100 RCLR----ALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R A+V+LPTR+LALQ+ +V + + GL +G ++ E +L+K
Sbjct: 170 FMPRNGTGAVVILPTRELALQIYNVARDVMQHHTQTHGLVMGGANRRAEAEKLVK----- 224
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
V++LV+TPGRL+DH+ T+GF +L LV+DE DR+L ++
Sbjct: 225 ----------------GVNLLVSTPGRLLDHLQNTKGFVYRNLACLVIDEADRILEIGFE 268
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
+ ++++ D + M+ SAT
Sbjct: 269 EEMRQIVKILPKDRQT--------------------------------------MLFSAT 290
Query: 276 LTQDPNKLAQLDL-HHPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEE 333
T LA+L PL++ +T+ E LE + + + L L L+ +
Sbjct: 291 QTTKVEDLARLSFKRKPLYVGIDDTKAVATREGLEQGYCVVPADKRFLLLFTFLKKNASK 350
Query: 334 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
K +VF SS S LLN+ + I +K G Q+Q+ R
Sbjct: 351 KVMVFFSSCNSVKFHSELLNY---IDIPVKAIHGKQKQAKR 388
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 69/317 (21%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 103
+ +GI P+Q I P L D + TGSGKT ++ALPI+Q LS
Sbjct: 28 EAVGIKQPTPIQ----HNCIPPILKGSDCIGCAKTGSGKTAAFALPILQKLSEDPYGVF- 82
Query: 104 ALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 163
LVV PTR+L +Q+ + F + +GL V + +G + ++ EL K+P
Sbjct: 83 GLVVTPTRELGIQIAEQFRVLGKPIGLRVTVVIGGIDMVEQGRELSKKPH---------- 132
Query: 164 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
I++ATPGRL DHI +T F L + +LV+DE DRLL + L +
Sbjct: 133 -----------IVIATPGRLADHIKSTSTFDLHAIKFLVLDEADRLLEGNFGPDLEVIFD 181
Query: 224 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 283
FLP+ +L + SAT+T +L
Sbjct: 182 ---------------FLPAKRQTL-----------------------LFSATITDTMKEL 203
Query: 284 AQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFT 339
++ + P F + E+L+ ++ +++K YL+ ++ E+ I+FT
Sbjct: 204 QKMSMDKP-FSWHSKAPVATVEQLDQRYVLMPAQVKDAYLMYIISEFTEKNRDHSLIIFT 262
Query: 340 SSVESTHRLCTLLNHFG 356
S+ + H L +L + G
Sbjct: 263 STCKYCHVLSIMLRNLG 279
>gi|147808007|emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]
Length = 199
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 26/183 (14%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 23 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QV 77
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L A V+ PTR+LA+Q+ + F A+ +GL + VG + L KRP
Sbjct: 78 LFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKRPH-------- 129
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
I+V TPGRLMDH++ T+GF+L + YLV+DE DRLL + ++ + +
Sbjct: 130 -------------IVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEI 176
Query: 222 LQL 224
L +
Sbjct: 177 LSV 179
>gi|346465817|gb|AEO32753.1| hypothetical protein [Amblyomma maculatum]
Length = 580
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 152/342 (44%), Gaps = 73/342 (21%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNR 97
LK + MG + +Q +TI P L E RD+ + TGSGKTL++ +P V+ LS
Sbjct: 96 LKAITETMGFKQMTEIQA----KTI-PHLLEGRDVVAAAKTGSGKTLAFLVPAVELLSKL 150
Query: 98 AV---RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
ALV+ PTR+LA+Q V + ++GL +G ++ E ++L K
Sbjct: 151 KFMPRNGTGALVIAPTRELAMQTFGVLQELLSGQNQTLGLIMGGTNRQSEAAKLAK---- 206
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
V++LVATPGRL+DH+ T F ++L L++DE DR+L +
Sbjct: 207 -----------------GVNLLVATPGRLLDHLQNTSEFVYKNLQCLIIDEADRILDIGF 249
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + +L++ LP R M+ SA
Sbjct: 250 EEEMKQILRI---------------LPK-----------------------RRQTMLFSA 271
Query: 275 TLTQDPNKLAQLDLH-HPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGE 332
TLT+ L ++ L PL++ E + + E LE ++C S + L L L+ +
Sbjct: 272 TLTKKTEDLVKVALKSEPLYIGLDEGKEQATVEGLEQGYVVCPSDKRFLLLFTFLKKNRK 331
Query: 333 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 332 KKVMVFFSSCLSVKYHHELLNY---IDLPVMSIHGKQKQAKR 370
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 62/293 (21%)
Query: 65 PGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P FE +D+ + TGSGKT ++ALPI+Q L R L A+++ PTR+LA Q+ +V A
Sbjct: 438 PLAFEGKDVIGLAETGSGKTGAFALPILQALLENPQR-LFAVIMAPTRELAFQINEVMEA 496
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
+ +GL VG + + L +P +++ATPGRL
Sbjct: 497 LGVGIGLKTVCIVGGIDMFQQSVALALKPH---------------------VVIATPGRL 535
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
+DH+ T+GF+L YLV+DE DR+L ++ + VL + E R TFL
Sbjct: 536 VDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVL--PRERR-----TFL--- 585
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 303
SAT+T KL + L +P + ++
Sbjct: 586 ----------------------------FSATMTSKVAKLQRASLKNPARVEVA-NKFST 616
Query: 304 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
P+ L L +K K YL +L + IVF S+ + R+ LL + G
Sbjct: 617 PKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLG 669
>gi|270010045|gb|EFA06493.1| hypothetical protein TcasGA2_TC009390 [Tribolium castaneum]
Length = 691
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 73/352 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E +KK+ P + + VD+ E + P LK A+ +M P+Q +
Sbjct: 114 KETRKKAAPNENFFET-VDLDT-EHASFYQMNLSRPLLK-AISDMKFVHPTPIQAS---- 166
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVK 118
TI L RD+C + TG+GKT +Y LP ++ L R V R LV++PTR+L +QV
Sbjct: 167 TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVPTRELGVQVY 226
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V +A + +GLAVG + + + L K P DI++A
Sbjct: 227 QVTKQLAQFSDIQIGLAVGGLDLKAQETILRKNP---------------------DIVIA 265
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ +T F L+ + L++DE DR+L E + + +
Sbjct: 266 TPGRLIDHLKSTPTFGLDSIEVLILDEADRMLDEYFAEQMKEI----------------- 308
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---T 295
I++C R M+ SAT+T++ LA + L+ P+ L +
Sbjct: 309 -----------IKQCARTRQT----------MLFSATMTEEVESLAAVSLNKPVRLFVDS 347
Query: 296 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 347
E + L + + E + + L AL+ E C+VF + + HR
Sbjct: 348 NREVAFGLRQEFVRIRQDKEGDREAI-LAALVCRTFREHCMVFVQTKKQAHR 398
>gi|320168710|gb|EFW45609.1| myc-regulated DEAD box protein [Capsaspora owczarzaki ATCC 30864]
Length = 707
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 65/328 (19%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAVRCLRALVVL- 108
F + + I P + +DL + TGSGKTL++ +P ++ +S N R ++++
Sbjct: 231 FTHMTEIQRRCIPPLVAGKDLLAAAKTGSGKTLAFLIPAIELMSQLNFMPRNGTGVIIIS 290
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+L+LQ V + + GL +G ++ E +L K
Sbjct: 291 PTRELSLQTYGVCRDLLRHHNHTFGLVMGGANRKQEAEKLCK------------------ 332
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
++IL+ATPGRL+DH+ T+GF +HL L++DE DR+L ++ + +++L D
Sbjct: 333 ---GINILIATPGRLLDHLQNTKGFNFKHLEMLIIDEADRILEIGFEEEMKQIIRLLPKD 389
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
++ R ++ SAT T++ LA++ L
Sbjct: 390 SQRR------------------------------------TVLFSATQTRNVEDLARISL 413
Query: 289 -HHPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + + E LE ++C++ + L L L+ +K +VF SS S
Sbjct: 414 KKEPLYIGVDDEKIVATAEGLEQGYVVCKAGQRFLLLFTFLKKNQNKKVMVFFSSCNSVK 473
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + E G Q+Q R
Sbjct: 474 FHSELLNY---IDLPVLEIHGRQKQQKR 498
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 62/298 (20%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
QE P L +D+ + TGSGKT +++LPI+Q L ++ AL++ PTR+LA+Q+
Sbjct: 44 QEQAIPHLLAGQDVIGLAQTGSGKTGAFSLPILQALMDKPQEHF-ALILSPTRELAIQIA 102
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
+ A+ +G+ + VG + + L KRP +LV
Sbjct: 103 EQVEALGSGIGVKSCVLVGGIDMMAQAIALAKRPH---------------------VLVG 141
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGR++DH++ T+GF+L+ L +LV+DE D+LL ++ + +L++
Sbjct: 142 TPGRVVDHLSNTKGFSLKQLKHLVLDEADKLLDMDFEQEIDQILKVI------------- 188
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 298
P R ++ SAT+T KL + L P+ +
Sbjct: 189 ------------------------PRERRTQL-FSATMTNKVQKLQRACLDKPVKIEVAH 223
Query: 299 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+Y + L + +K K YL ++ L ++FT + EST R+ LL + G
Sbjct: 224 -KYSTVDTLRQQYVFIPAKYKDCYLAYVINELSGSTFMIFTRTCESTRRIALLLRNLG 280
>gi|350415766|ref|XP_003490744.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
impatiens]
Length = 452
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 28/179 (15%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRA 104
MG+ P+Q + P + D CI + TGSGKTL++ALPI+Q LS A
Sbjct: 19 MGLKCPTPIQ-----KNCIPKILAGDDCIGCAKTGSGKTLAFALPILQKLSEDPYGIF-A 72
Query: 105 LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 164
LV+ PTR+LA Q+ D F+AI ++GL + VG + + EL K P
Sbjct: 73 LVLTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLELSKHPH----------- 121
Query: 165 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
I+VATPGRL DH+ + F+L+ + +LV+DE DRLL + L T+ +
Sbjct: 122 ----------IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGHFDDQLKTIFE 170
>gi|291001779|ref|XP_002683456.1| dead box RNA helicase [Naegleria gruberi]
gi|284097085|gb|EFC50712.1| dead box RNA helicase [Naegleria gruberi]
Length = 907
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 70/341 (20%)
Query: 40 KVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-- 97
K AL+ G ++ +Q A +G RD+ + TGSGKTL++ LP+++ L +
Sbjct: 67 KDALKKAGFVTMKDIQKASILHALGG----RDILGAARTGSGKTLAFVLPVLELLYRKRW 122
Query: 98 -AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
+ L AL++ P R+LA Q+ +V S GL VG + E E
Sbjct: 123 GKLDGLGALILSPNRELAQQIFEVLKLCGRYHHFSAGLLVGGTKNLKEEKE--------- 173
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
IC ++ILVATPGRL+ H++ T GF +L LV+DE DRLL ++
Sbjct: 174 HIC------------NMNILVATPGRLLQHMDETAGFICSNLQVLVLDEADRLLELGFRN 221
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L ++L LP + +L + SAT
Sbjct: 222 ELNSILD---------------GLPKSRQTL-----------------------LFSATQ 243
Query: 277 TQDPNKLAQLDLH--HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+D LA+L L + +++ E+ +P++L + + C+ + K L + L+S +K
Sbjct: 244 TRDIKDLARLSLSKTNTEYISVHESE-PVPKQLTQHYIECQLEDKIDILFSFLKSHQNKK 302
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRR 375
IVF+S+V+ L T+ H L +K+ + +G Q RR
Sbjct: 303 VIVFSSTVKQVSFLHTVFKHLP-LSVKMFKLAGRMSQGSRR 342
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 77/299 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +D+ + TGSGKT ++ALPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 47 IQTEAIPLALEGKDVIGLAETGSGKTGTFALPILQSLLEKPQR-LFALVLTPTRELAFQI 105
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+ F A+ ++G+ + VG + + +L K+P +++
Sbjct: 106 SEQFEALGSSIGIKCVVVVGGIDMVTQALQLAKKP---------------------HVII 144
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF L L YLV D++L+ +P +
Sbjct: 145 ATPGRLVDHLENTKGFNLRALKYLV----DKILK-----VIP--------------RERH 181
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
T+L S AT+T+ KL + L +P+ +
Sbjct: 182 TYLFS-------------------------------ATMTKKVAKLQRASLSNPVKVEV- 209
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++YK + L+ L SK K +YLV++L L +VF S+ +T R LL + G
Sbjct: 210 NSKYKTVDTLQQSYLFIPSKYKDVYLVSILNELAGNSFMVFCSTCNNTQRTAFLLRNLG 268
>gi|55741498|ref|NP_001006997.1| ATP-dependent RNA helicase DDX18 [Rattus norvegicus]
gi|54035578|gb|AAH83919.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Rattus norvegicus]
Length = 674
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 78/381 (20%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAV 58
++EA +P LP + FED L L + LK A++ MG + +Q
Sbjct: 159 VKEADDSEVPSLPLGVT----GAFEDTSFASLSNLVNENTLK-AIEEMGFKHMTEIQ--- 210
Query: 59 WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLAL 115
++I P L RDL + TGSGKTL++ +P+++ L L++ PTR+LA+
Sbjct: 211 -HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAM 269
Query: 116 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 175
Q V + + GL +G S+ + E+ Q+L + ++I
Sbjct: 270 QTFGVLKELMTHHVHTYGLIMGGSNRSAEV---------------------QKLLNGINI 308
Query: 176 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 235
+VATPGRL+DH+ T GF ++L LV+DE DR+L ++ L +++L
Sbjct: 309 VVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL----------- 357
Query: 236 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFL 294
LP+ R M+ SAT T+ LA++ L PL++
Sbjct: 358 ----LPA-----------------------RRQTMLFSATQTRKVEDLARISLKKEPLYV 390
Query: 295 TTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 353
+ + + LE ++C S+ + L L L+ ++K +VF SS S LLN
Sbjct: 391 GVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLN 450
Query: 354 HFGELRIKIKEYSGLQRQSVR 374
+ + + + G Q+Q+ R
Sbjct: 451 Y---IDLPVLAIHGKQKQNKR 468
>gi|432871166|ref|XP_004071865.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Oryzias latipes]
Length = 439
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 144/324 (44%), Gaps = 71/324 (21%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V F+D + + C A +G S +QV E I L +D+ + TGS
Sbjct: 38 VKTFKDLGVTDVLC------EACDQLGWKSPTKIQV----EAIPVALQGKDVIGLAETGS 87
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSS 140
GKT ++ALPI+Q+L R L LV+ PTR+LA Q+ + F A+ ++G+ + VG
Sbjct: 88 GKTGAFALPILQSLLASPQR-LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGID 146
Query: 141 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 200
+ + L K+P I++ATPGRL+DH+ T+GF+L L +
Sbjct: 147 MMSQSLVLAKKPH---------------------IVIATPGRLIDHMENTKGFSLRALKF 185
Query: 201 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 260
LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 186 LVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL-------------------- 218
Query: 261 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 320
SAT+T+ KL + L P+ T+Y ++L+ Y + +K K
Sbjct: 219 -----------FSATMTKKVQKLQRAALKDPVKCAVS-TKYSTVDKLQQYYVFIPAKYKN 266
Query: 321 LYLVALLQSLGEEKCIVFTSSVES 344
L AL + + + ++ + V S
Sbjct: 267 KRLGALNKFKSKSRSVLLATDVAS 290
>gi|380026593|ref|XP_003697032.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
florea]
Length = 452
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 23/165 (13%)
Query: 60 QETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
Q+ P + D CI + TGSGKTL++ALPI+Q LS ALV+ PTR+LA Q+
Sbjct: 28 QQNCIPRILAGDDCIGCAKTGSGKTLAFALPILQKLSEDPYGIF-ALVLTPTRELAFQIA 86
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
D F+AI ++GL + VG + + EL K P I+VA
Sbjct: 87 DQFSAIGKSIGLKKCVIVGGMDMVIQGLELSKHPH---------------------IVVA 125
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
TPGRL DH+ + F+L+ + +LV+DE DRLL + L T+ +
Sbjct: 126 TPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGYFDDQLKTIFE 170
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 60/299 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ + I L RD+ + TGSGKT ++ LPI+ L + R L + + PTR+LA+Q+
Sbjct: 22 IQKAAIPVALSGRDVIGLAETGSGKTGAFGLPILHKLLEKPSR-LFGVALAPTRELAVQI 80
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+VF A+ A+GL VG IA + L K P ++V
Sbjct: 81 HEVFDALGAAIGLRCVCVVGGVEIAAQALALAKLPH---------------------VVV 119
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GF+L LV+DE DR+L ++ L ++
Sbjct: 120 ATPGRLVDHLENTKGFSLRTCKCLVMDEADRMLSMDFEKELDAIV--------------- 164
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 297
G++ RC M+ SAT+T KL + L+ P+ +
Sbjct: 165 -------GAIPREGRC---------------SMLFSATMTSKVAKLQRASLYKPVKVAVN 202
Query: 298 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ ++ +P +L+ L +K K YL A+L + +VF ++ R LL + G
Sbjct: 203 D-KFAMPRQLDQRYLFVPAKHKECYLAAVLDARRGATALVFCATCAGATRATLLLRNLG 260
>gi|164662887|ref|XP_001732565.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
gi|159106468|gb|EDP45351.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
Length = 542
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 151/345 (43%), Gaps = 70/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP---IV 91
L P AL MG ++ VQ + I P L +D+ + TGSGKTL++ +P ++
Sbjct: 43 LTPATSKALDAMGFKTMTEVQ----ERCIPPLLAGKDVLGAAQTGSGKTLAFLIPAIEML 98
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
Q L + A+V+ PTR+LALQ+ V + ++G+ +G ++
Sbjct: 99 QRLKFKPRNGTGAIVISPTRELALQIFGVAKELMAHQSQTLGIIMGGAN----------- 147
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
K EA +LQ V++++ATPGRL+DH+ T+GF +L L++DE DR+L
Sbjct: 148 RKAEA----------DKLQKGVNLIIATPGRLLDHLQNTKGFVFTNLKTLIIDEADRILE 197
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + ++++ P M+
Sbjct: 198 IGFEDEMRQIVKIL-------------------------------------PQEHRQTML 220
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTGET-RYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L PL++ E +LE ++C+S + L L L+
Sbjct: 221 FSATQTTKVQDLARISLRPGPLYINVHEQMAASTVSKLEQGYVVCDSDKRFLLLFTFLKR 280
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+K IVF +S S LLN+ + + + + G Q+Q R
Sbjct: 281 NAGKKIIVFMNSCNSVKFHGELLNY---IDVPVLDLHGKQKQQKR 322
>gi|429862066|gb|ELA36725.1| ATP dependent RNA helicase [Colletotrichum gloeosporioides Nara
gc5]
Length = 755
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 64/348 (18%)
Query: 16 RSPVDVSLFEDCPLDHLPCLDPRLKVALQN-MGISSLFPVQVAVWQETIGPGLFERDLCI 74
R P + +L + H + RL + L + + + + +Q V + I + D +
Sbjct: 138 REPSNAALSPEAASFHALGISRRLALTLSDKIQLKAPTAIQAKVIPQLI---TEDSDAFV 194
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAAIAPAVG 129
+ TGSGKTL+Y LPI+Q + + + R A+V+ PTR+L Q+ V A I P
Sbjct: 195 QAQTGSGKTLAYLLPILQRILSVEGQIKRDSGLFAIVLAPTRELCRQIDVVLAKILPPYL 254
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
+S + G+S +++ L+ V+IL+ATPGRL DH+N
Sbjct: 255 VSTTVIGGESKHSEK----------------------SRLRKGVNILIATPGRLSDHLNN 292
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+ + + +LV+DE DRL+ ++A L T++ R E SD + S G K
Sbjct: 293 TKSLDVGTVRWLVLDEGDRLMEMGFEAELRTIVGKIR---EGGLSDTTANGVSLTGLPK- 348
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------ETRY 301
R V ++ SAT+ + KL ++ L + +TT E ++
Sbjct: 349 ----------------RRVTVLCSATMKMNVQKLGEISLEDAVHVTTSEEDQDGAEEVKF 392
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEE-----KCIVFTSSVES 344
+ P +L+ +I +KL+ + L++LL+S K IVF S +S
Sbjct: 393 EAPAQLKQNYVIVPAKLRLVTLISLLKSTFSRKGSVMKAIVFLSCADS 440
>gi|327348721|gb|EGE77578.1| ATP-dependent RNA helicase HAS1 [Ajellomyces dermatitidis ATCC
18188]
Length = 639
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVL 108
F + + I P L RD+ + TGSGKTL++ +P V+ LS + +V+
Sbjct: 180 FETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIVIS 239
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ E +L+K
Sbjct: 240 PTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLVK------------------ 281
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ + ++++ S+
Sbjct: 282 ---GVNLLIATPGRLLDHLRDTPGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE 338
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ M+ SAT T LA++ L
Sbjct: 339 DRQ-------------------------------------TMLFSATQTTKVEDLARISL 361
Query: 289 HH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + + E LE +IC+S + L L + L+ ++K IVF SS
Sbjct: 362 RQGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 421
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + + G Q+Q R
Sbjct: 422 YHAELLNY---IDLPVLDLHGKQKQQKR 446
>gi|358382399|gb|EHK20071.1| hypothetical protein TRIVIDRAFT_171594 [Trichoderma virens Gv29-8]
Length = 584
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 171/378 (45%), Gaps = 74/378 (19%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI 63
A+ V+P +P+ +L + + L + +K A+Q MG + + +Q + I
Sbjct: 82 ARDADGDVIPTNSAPILSTLADSQKFEDLKLSEKTMK-AIQEMGFTKMTNIQ----RSAI 136
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVKDV 120
P L +D+ + TGSGKTL++ +P ++ LS+ + +VV PTR+LALQ+ V
Sbjct: 137 PPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFKPRNGTGVIVVSPTRELALQIFGV 196
Query: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180
+ + G+ +G ++ E+ +L K V++L+ATP
Sbjct: 197 ARELMKHHSQTYGIVIGGANRRAEVDKLTK---------------------GVNLLIATP 235
Query: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240
GRL+DH+ T+ F ++L L++DE DR+L ++ + ++++ NE+R +
Sbjct: 236 GRLLDHLLNTQ-FVFKNLKSLIIDEADRILEVGFEDEMRQIVKVL--SNEDRQT------ 286
Query: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGET 299
M+ SAT T LA++ L PL++ E
Sbjct: 287 -----------------------------MLFSATQTTKVEDLARISLRPGPLYINVDEE 317
Query: 300 R-YKLPERLESYKLICESKLKPLYLVALLQSL--GEEKCIVFTSSVESTHRLCTLLNHFG 356
+ + + LE ++CE + L L + L+ + ++K IVF SS S LLN+
Sbjct: 318 KQHSTVDGLEQGYVLCEGDERFLLLFSFLRKMQAKKKKVIVFFSSCASVKYYAELLNY-- 375
Query: 357 ELRIKIKEYSGLQRQSVR 374
+ + + G Q+Q R
Sbjct: 376 -IDCPVLDLHGKQKQQKR 392
>gi|340728741|ref|XP_003402675.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
terrestris]
Length = 452
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 28/179 (15%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRA 104
MG+ P+Q + P + D CI + TGSGKTL++ALPI+Q LS A
Sbjct: 19 MGLKCPTPIQ-----KNCIPKILAGDDCIGCAKTGSGKTLAFALPILQKLSEDPYGIF-A 72
Query: 105 LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 164
L++ PTR+LA Q+ D F+AI ++GL + VG + + EL K P
Sbjct: 73 LILTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLELSKHPH----------- 121
Query: 165 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 223
I+VATPGRL DH+ + F+L+ + +LV+DE DRLL + L T+ +
Sbjct: 122 ----------IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGHFDDQLKTIFE 170
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 144/326 (44%), Gaps = 68/326 (20%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ + F + + + + L RD+ + TGSGKT ++ALPI+
Sbjct: 24 LGLIDPLLE-ALEQLN----FKIPTEIQVQALPHALQGRDIIGVASTGSGKTAAFALPIL 78
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS-VGLAVGQSSIADEISELIK 150
Q L + L A ++ PTR+LA Q+ A+ A+G+ V L G +A ++ L K
Sbjct: 79 QKLWEEP-KGLFACIMAPTRELAYQISQQIEALGSAMGVRCVTLVGGMDKMAQAVA-LAK 136
Query: 151 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 210
RP I+VATPGRL DH+ T+GF+L L +LV+DE DRLL
Sbjct: 137 RPH---------------------IVVATPGRLNDHLEDTKGFSLRGLKFLVLDEADRLL 175
Query: 211 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 270
D + FG + +++ K P R
Sbjct: 176 -----------------DMD-------------FGPI-------IDKILKAIPRER-TTY 197
Query: 271 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 330
+ SAT+T KL + L +P+ + E +Y L Y L K ++L+ L L
Sbjct: 198 LFSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYYLFIPLVQKDVHLIYLANIL 256
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFG 356
+ I+FT +V RL +L G
Sbjct: 257 AQNSIIIFTRTVHDAQRLSIILRTLG 282
>gi|117919611|ref|YP_868803.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611943|gb|ABK47397.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 409
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 141/328 (42%), Gaps = 70/328 (21%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L +L L +G P+Q+ E I L ++D+ + TG+GKT ++ALPI+Q
Sbjct: 7 SLHSQLVNTLAELGYQQPTPIQI----EAIPAILAKQDVMAGAQTGTGKTAAFALPILQQ 62
Query: 94 L-----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
L S A + +RALV++PTR+LA+QV+ F A + VG+A G SI
Sbjct: 63 LLIDNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSI------- 115
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
E E ++ +D+L+ATPGRL+DH+ L+ L LV DE DR
Sbjct: 116 --------------EAQQAEFKAGIDVLIATPGRLLDHLRQG-ALNLKRLSVLVFDEADR 160
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L + + VL+ + + A T S FG K + R P+L+
Sbjct: 161 MLDMGFMDEIKAVLKQVPAQRQTLLFSA-TLDDSIFGFSKNLLRD-----------PKLI 208
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 328
++ R ++E +S K ++ L++
Sbjct: 209 EVA---------------------------KRNTTAAQVEQRVYAIDSDRKTEFVSHLVR 241
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFG 356
S ++ ++F+ + + +L T LN G
Sbjct: 242 SKNWQQVLIFSRTKQGVDKLTTQLNQLG 269
>gi|339250128|ref|XP_003374049.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316969700|gb|EFV53757.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 693
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 74/336 (22%)
Query: 16 RSPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
RS ++SL FE+ L L A+ +M + P+Q A I L +D+C
Sbjct: 145 RSKYNISLTFEEMNLSR------SLNKAISSMNYVNPTPIQSAC----IPVALLGKDICA 194
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSV 132
+ TG+GKT +Y +PI++ L + V R R LV++PTR+LA+QV + +A +S+
Sbjct: 195 CAATGTGKTCAYMIPILERLLFKPVGRRITRVLVMVPTRELAMQVYETGTTLAKYTSISI 254
Query: 133 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 192
L+ G + + EA + +P D+++ATPGRL+DH++ + G
Sbjct: 255 ALSTGGMDLKSQ----------EAALRLNP-----------DVVIATPGRLIDHLHNSPG 293
Query: 193 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 252
F L + LV+DE DR+L E ++ + L+ +R
Sbjct: 294 FNLNGVEILVLDEADRMLDEHFEEQM----------------------------LEIMRL 325
Query: 253 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-TRYKLPERLESYK 311
C P M+ SAT+T LA + L P+ L E T L R + +
Sbjct: 326 CS----------PTRQAMLFSATMTDKVKDLASVSLKKPVKLFVNENTEMALNLRQQFVR 375
Query: 312 LICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTH 346
+ E + + L ALL+ K ++F + E H
Sbjct: 376 IRKERECSREASLAALLKRSFTSKVLLFAGTKEVCH 411
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 126/287 (43%), Gaps = 61/287 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RD+ TGSGKT ++ALPI+Q L + A V+ PTR+LA+Q+ + F A+ +G
Sbjct: 64 RDVIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTRELAIQIAEQFEALGSGIG 122
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L + VG ++ + KRP I+V TPGRL+DH+
Sbjct: 123 LVCSVLVGGVDRMQQVLSIAKRPH---------------------IVVGTPGRLLDHLKD 161
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF+L + YLV+DE D+LL ++ L +L
Sbjct: 162 TKGFSLTKVKYLVLDEADKLLNLEFKESLDDIL--------------------------- 194
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
K+ P R + SAT+T+ +KL + L +P+ + ++Y + L+
Sbjct: 195 ----------KEIPKERRT-YLFSATMTKKVSKLQRACLRNPVKVEV-SSKYSTVDTLKQ 242
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ K YLV +L L ++F + EST L L + G
Sbjct: 243 EWYFVPADYKDCYLVHVLNELQGSMIMIFVRTCESTRLLALTLRNLG 289
>gi|160874449|ref|YP_001553765.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|378707696|ref|YP_005272590.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418023318|ref|ZP_12662303.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|160859971|gb|ABX48505.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|315266685|gb|ADT93538.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353537201|gb|EHC06758.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 411
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 36/227 (15%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +L L ++G S P+Q+ E I L +RD+ + TG+GKT ++ALPI+
Sbjct: 7 SLNSKLVNTLASLGYESPTPIQL----EAIPAILAKRDVMAGAQTGTGKTAAFALPILHH 62
Query: 94 L-------SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 146
L AVR +RALV++PTR+LA+QV+ F A + VG+A G SI +++
Sbjct: 63 LLALSPLQELTAVRPVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIDAQVA 122
Query: 147 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
+ +D+L+ATPGRL+DH+ +L+ L LV DE
Sbjct: 123 ---------------------VFNAGIDVLIATPGRLLDHLRQG-ALSLKQLSVLVFDEA 160
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRR 252
DR+L + + VL+ SD + A+ L +A SL KT+ R
Sbjct: 161 DRMLDMGFMDEIQAVLKQVPSDRQTLLFSAT--LDAAIFSLSKTLLR 205
>gi|225559047|gb|EEH07330.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus G186AR]
Length = 631
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVL 108
F + + I P L RD+ + TGSGKTL++ +P V+ LS + +VV
Sbjct: 172 FETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIVVS 231
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 232 PTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTK------------------ 273
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + ++++ ++
Sbjct: 274 ---GVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE 330
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ M+ SAT T LA++ L
Sbjct: 331 DRQ-------------------------------------TMLFSATQTTKVEDLARISL 353
Query: 289 HH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + + E LE +IC+S + L L + L+ ++K IVF SS
Sbjct: 354 RQGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 413
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + + G Q+Q R
Sbjct: 414 YHAELLNY---IDLPVLDLHGKQKQQKR 438
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 141/317 (44%), Gaps = 70/317 (22%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCL 102
+G +S P+Q AV + L RD+C + TGSGKT ++ LP ++ + +R V
Sbjct: 168 LGYASPTPIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPCLERMLHRGPKPVAAT 223
Query: 103 RALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 162
LV++PTR+LA+QV + +A + L VG S + + L RP
Sbjct: 224 HVLVLVPTRELAVQVHQMTERLAQFTSVRAALVVGGLSANVQATSLRSRP---------- 273
Query: 163 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 222
+++VATPGRL+DH+ T LE L LV+DE DRLL +L +
Sbjct: 274 -----------EVVVATPGRLIDHVRNTHSVGLEDLATLVLDEADRLLE---MGFLEEIR 319
Query: 223 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 282
++ +R C P R M+ SATLT +
Sbjct: 320 EI-------------------------VRHC---------PKRRQT-MLFSATLTSGVEE 344
Query: 283 LAQLDLHHPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 339
LA+ + +P L+ G T L E + + + +K +L+A++ ++CI+F+
Sbjct: 345 LAEFSMKNPARLSADQIGTTPGTLTEEVLRLR-PGAAAMKEAHLLAIVARTFTKRCIIFS 403
Query: 340 SSVESTHRLCTLLNHFG 356
+ + HRL ++ G
Sbjct: 404 RTKQQAHRLKIIMGIHG 420
>gi|198413643|ref|XP_002129533.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 2 [Ciona intestinalis]
Length = 401
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 31/205 (15%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ +P++Q L R L ALV+ PTR+LA Q+
Sbjct: 46 IQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQALLENPQR-LFALVLTPTRELAFQI 104
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
++ F A+ A+G+ + VG + + L K+P ++V
Sbjct: 105 EEQFKALGSAIGIKTCVVVGGVDMMGQQIILAKKPH---------------------VVV 143
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
ATPGRL+DH+ T+GFTL + +LV+DE DR+L +++ L T+L++ E R
Sbjct: 144 ATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTILKVI--PRERR----- 196
Query: 238 TFLPSA--FGSLKTIRRCGVERGFK 260
TFL SA G +K ++R + + K
Sbjct: 197 TFLFSATMTGKVKKLQRAALTKPVK 221
>gi|114046738|ref|YP_737288.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113888180|gb|ABI42231.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 409
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 142/328 (43%), Gaps = 70/328 (21%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L +L L +G P+QV E I L ++D+ + TG+GKT ++ALPI+Q
Sbjct: 7 SLHSQLVNTLAELGYLQPTPIQV----EAIPAILAKQDVMAGAQTGTGKTAAFALPILQQ 62
Query: 94 L-----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
L S A + +RALV++PTR+LA+QV+ F A + VG+A G SI
Sbjct: 63 LLLDNESQDAPKDIRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSI------- 115
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
E E ++ VD+L+ATPGRL+DH+ L++L LV DE DR
Sbjct: 116 --------------EAQQAEFKAGVDVLIATPGRLLDHLRQGV-LNLKYLSVLVFDEADR 160
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L + + VL+ + + A T S FG K + R P+L+
Sbjct: 161 MLDMGFMDEIKAVLKQVPAQRQTLLFSA-TLDDSIFGFSKNLLRD-----------PKLI 208
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 328
++ R ++E +S K ++ L++
Sbjct: 209 EVA---------------------------KRNTTAAQVEQRVYAIDSDRKTEFVSHLVR 241
Query: 329 SLGEEKCIVFTSSVESTHRLCTLLNHFG 356
S ++ ++F+ + + +L T LN G
Sbjct: 242 SKNWQQVLIFSRTKQGVDKLTTQLNQLG 269
>gi|145351031|ref|XP_001419891.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580124|gb|ABO98184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-- 99
++ MG ++ VQ + P L +D+ + TGSGKTL++ +P V+ L +
Sbjct: 3 GIEQMGFKTMTEVQA----RCVPPLLAGKDVLGAARTGSGKTLAFLVPSVELLYHAKFMP 58
Query: 100 -RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
+V+ PTR+LALQ+ +V + + GL +G ++ E LIK
Sbjct: 59 RNGTGVMVLSPTRELALQIYNVAQQLMEKHSQTHGLIIGGANRRAEAERLIK-------- 110
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
V++LVATPGRL+DH+ TRGFT L V+DE DR+L ++ +
Sbjct: 111 -------------GVNLLVATPGRLLDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEM 157
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 278
T++++ + + M+ SAT T
Sbjct: 158 RTIVKMLPKERQT--------------------------------------MLFSATQTT 179
Query: 279 DPNKLAQLDLHHPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 337
LA+L L P+++ ++R +E + S+ + L L L+ ++K +V
Sbjct: 180 KVEDLARLSLKSPIYIGVDDSRAVSTATGVEQGYCVVPSEQRFLLLFTFLKKNLKKKIMV 239
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F SS S LLN+ + I + + G Q+Q R
Sbjct: 240 FFSSCNSVKYHAELLNY---IDIPVSDIHGKQKQQRR 273
>gi|325088110|gb|EGC41420.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus H88]
Length = 635
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVL 108
F + + I P L RD+ + TGSGKTL++ +P V+ LS + +VV
Sbjct: 176 FETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIVVS 235
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ E +L K
Sbjct: 236 PTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAGKLTK------------------ 277
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + ++++ ++
Sbjct: 278 ---GVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE 334
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ M+ SAT T LA++ L
Sbjct: 335 DRQ-------------------------------------TMLFSATQTTKVEDLARISL 357
Query: 289 HH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + + E LE +IC+S + L L + L+ ++K IVF SS
Sbjct: 358 RQGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 417
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + + G Q+Q R
Sbjct: 418 YHAELLNY---IDLPVLDLYGKQKQQKR 442
>gi|126173490|ref|YP_001049639.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|386340244|ref|YP_006036610.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|125996695|gb|ABN60770.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
gi|334862645|gb|AEH13116.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 411
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 115/227 (50%), Gaps = 36/227 (15%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +L L ++G S P+Q+ E I L +RD+ + TG+GKT ++ALPI+
Sbjct: 7 SLNSKLVNTLASLGFESPTPIQL----EAIPAILAKRDVMAGAQTGTGKTAAFALPILHH 62
Query: 94 L-------SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 146
L AV+ +RALV++PTR+LA+QV+ F A + VG+A G SI +++
Sbjct: 63 LLALSPLQELTAVKPIRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIDAQVA 122
Query: 147 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 206
+ +D+L+ATPGRL+DH+ +L+ L LV DE
Sbjct: 123 ---------------------VFNAGIDVLIATPGRLLDHLRQG-ALSLKQLSVLVFDEA 160
Query: 207 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRR 252
DR+L + + VL+ SD + A+ L +A SL KT+ R
Sbjct: 161 DRMLDMGFMDEIQAVLKQVPSDRQTLLFSAT--LDAAIFSLSKTLLR 205
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 70/337 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 318 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 373
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R ++++PTR+LA+Q +V +A ++ VG S+ ++ + L KRP
Sbjct: 374 PTSRVVILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRP------- 426
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
D+++ATPGR +DH+ + FT++ L LV+DE DR+L + + L
Sbjct: 427 --------------DVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 472
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
+L T +P + + M+ SAT+T +
Sbjct: 473 EIL---------------TTIPKSRQT-----------------------MLFSATMTNN 494
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIV 337
+KL ++ L+ P+ L + + ++ + +L + K L YL+ L +++ +++ IV
Sbjct: 495 VDKLIRVGLNRPVRLMVDAKKQTVGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIV 554
Query: 338 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
F S + HR+ + FG L +K+ E G Q R
Sbjct: 555 FFRSKKEAHRVRII---FGLLGLKVTELHGSMSQEQR 588
>gi|170016030|ref|NP_001101294.2| probable ATP-dependent RNA helicase DDX31 [Rattus norvegicus]
gi|169642287|gb|AAI60917.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Rattus norvegicus]
Length = 682
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 84/315 (26%)
Query: 56 VAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLP 109
+V +++I P L E RD + S TGSGKTL+Y +P+VQ+L + R ALV++P
Sbjct: 128 TSVQKQSI-PVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVP 186
Query: 110 TRDLALQVKD-VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
TR+LALQ D V + P + G+ +G E + L K
Sbjct: 187 TRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK------------------ 228
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
++IL++TPGRL+DHI +T+ + +LVVDE DR+L ++ + +L ++
Sbjct: 229 ---GINILISTPGRLVDHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAE 285
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ R + ++LSATLT+ +LA + L
Sbjct: 286 CQKRQN-----------------------------------VLLSATLTEGVTRLADISL 310
Query: 289 HHPLFLTTGET----------------RYKLPERLESYKLICESKLKPLYLVALL----Q 328
H+P+ ++ + + +PE L+ Y ++ SKL+ + L A + +
Sbjct: 311 HNPVSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCK 370
Query: 329 SLGEEKCIVFTSSVE 343
++K IVF SS E
Sbjct: 371 FEKDQKMIVFFSSCE 385
>gi|149039175|gb|EDL93395.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 (predicted) [Rattus
norvegicus]
Length = 682
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 84/315 (26%)
Query: 56 VAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLP 109
+V +++I P L E RD + S TGSGKTL+Y +P+VQ+L + R ALV++P
Sbjct: 128 TSVQKQSI-PVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVP 186
Query: 110 TRDLALQVKD-VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
TR+LALQ D V + P + G+ +G E + L K
Sbjct: 187 TRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK------------------ 228
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
++IL++TPGRL+DHI +T+ + +LVVDE DR+L ++ + +L ++
Sbjct: 229 ---GINILISTPGRLVDHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAE 285
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
+ R + ++LSATLT+ +LA + L
Sbjct: 286 CQKRQN-----------------------------------VLLSATLTEGVTRLADISL 310
Query: 289 HHPLFLTTGET----------------RYKLPERLESYKLICESKLKPLYLVALL----Q 328
H+P+ ++ + + +PE L+ Y ++ SKL+ + L A + +
Sbjct: 311 HNPVSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCK 370
Query: 329 SLGEEKCIVFTSSVE 343
++K IVF SS E
Sbjct: 371 FEKDQKMIVFFSSCE 385
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 125/287 (43%), Gaps = 61/287 (21%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVG 129
RDL TGSGKT ++ALPI+Q L + A V+ PTR+LA+Q+ + F A+ A+G
Sbjct: 56 RDLIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTRELAIQIAEQFEALGSAIG 114
Query: 130 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 189
L + VG ++ + KRP I+V TPGRL+DH+
Sbjct: 115 LVCSVLVGGVDRMQQVLSIAKRPH---------------------IVVGTPGRLLDHLKD 153
Query: 190 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 249
T+GF+L + YLV+DE D+LL ++ L +L+ + T+L
Sbjct: 154 TKGFSLNKVKYLVLDEADKLLNLEFKESLDDILKAIPKERR-------TYL--------- 197
Query: 250 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 309
SAT+T+ KL + L +P+ + ++Y + L+
Sbjct: 198 ----------------------FSATMTKKVAKLQRACLRNPVKVEV-SSKYSTVDTLKQ 234
Query: 310 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
+ K YLV L L ++F + EST L L + G
Sbjct: 235 EWYFVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLG 281
>gi|170086121|ref|XP_001874284.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651836|gb|EDR16076.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 517
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 70/345 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P+ L +MG S++ VQ Q++I L +DL + TGSGKTL++ +P V+ L
Sbjct: 8 LSPQTLQGLSDMGFSTMTSVQ----QKSIPVLLAGKDLLGAARTGSGKTLAFLIPAVELL 63
Query: 95 SNRAVRCLRA---LVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 151
+ + +++ PTR+LALQ+ V + + G+ +G +S+ E LIK
Sbjct: 64 HRLKFKPMNGTGIIIITPTRELALQIFGVAKDLMAHHSQTFGIVIGGTSVRAERERLIK- 122
Query: 152 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 211
V++LVATPGRL+DH+ +GF +L LV+DE DR+L
Sbjct: 123 --------------------GVNLLVATPGRLLDHLREAKGFVFRNLKGLVIDEADRILE 162
Query: 212 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 271
++ + +++ + LP K R+ M+
Sbjct: 163 VGFEEEMKSIISI---------------LP------KEDRQT----------------ML 185
Query: 272 LSATLTQDPNKLAQLDLH-HPLFLTTG-ETRYKLPERLESYKLICESKLKPLYLVALLQS 329
SAT T LA++ L P+ + E L ++C S + L L L+
Sbjct: 186 FSATQTTKVTDLARISLRPGPIHIDVDKEEATSTVSTLSQGYVVCPSDRRFLLLYTFLKK 245
Query: 330 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
++K IVF SS S L+N+ + + + + G Q+Q R
Sbjct: 246 NLKKKVIVFFSSCNSVKYHAELMNY---IDVPVLDLHGKQKQQKR 287
>gi|240281972|gb|EER45475.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus H143]
Length = 542
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 66/328 (20%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVL 108
F + + I P L RD+ + TGSGKTL++ +P V+ LS + +VV
Sbjct: 180 FETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIVVS 239
Query: 109 PTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 168
PTR+LALQ+ V + + G+ +G ++ + EAG +
Sbjct: 240 PTRELALQIFGVARELMAHHSQTYGIVIGGAN-----------RRAEAG----------K 278
Query: 169 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 228
L V++L+ATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + ++++
Sbjct: 279 LTKGVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKI---- 334
Query: 229 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 288
LP+ +D+ M+ SAT T LA++ L
Sbjct: 335 -----------LPA-----------------EDRQT-----MLFSATQTTKVEDLARISL 361
Query: 289 HH-PLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 346
PL++ + + E LE +IC+S + L L + L+ ++K IVF SS
Sbjct: 362 RQGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVK 421
Query: 347 RLCTLLNHFGELRIKIKEYSGLQRQSVR 374
LLN+ + + + + G Q+Q R
Sbjct: 422 YHAELLNY---IDLPVLDLYGKQKQQKR 446
>gi|310795196|gb|EFQ30657.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 759
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 60/294 (20%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAA 123
+ D + + TGSGKTL+Y LPI+Q + + + R A+V+ PTR+L Q++ V A
Sbjct: 194 DNDAFVQAQTGSGKTLAYLLPIIQRILSVEGQIKRDSGLFAIVMAPTRELCRQIELVLAK 253
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
+ P +S + G+S +++ L+ V+IL+ATPGRL
Sbjct: 254 VLPPYLVSTTVIGGESKHSEK----------------------SRLRKGVNILIATPGRL 291
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
DH+ T+ + + +LV+DE DRL+ ++A L T++ R + P A
Sbjct: 292 SDHLQHTKTLDVGTVRWLVLDEGDRLMEMGFEAELRTIVSKIREN------------PLA 339
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------ 297
+ + + + R V ++ SAT+ + KL ++ L + +TT
Sbjct: 340 KSTANGVSLANLPQ--------RRVTVLCSATMKMNVQKLGEISLEDAVHITTSEEEQVD 391
Query: 298 --ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-----KCIVFTSSVES 344
ET+++ P +L+ LI +KL+ + L+ALL+S K IVF S +S
Sbjct: 392 GEETKFEAPAQLKQNYLIVPAKLRLVTLIALLKSTFSRKGSVMKAIVFLSCADS 445
>gi|325186816|emb|CCA21361.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 715
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 156/369 (42%), Gaps = 90/369 (24%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVAL----QNMGISSLFPVQVAVWQETIGPGLF 68
P S D +C D L LDPRL L + G + F V + +I L
Sbjct: 136 PHSMSTSDQIFASECTFDALQ-LDPRLAQILVSPIEAKGFA--FKCPTRVQKLSILHVLQ 192
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVKDVFAA 123
++D+ + S TGSGKTL+Y LPI+Q L + R R AL+++PTR+L LQ+ D
Sbjct: 193 KKDVLVKSETGSGKTLAYLLPIIQILQSSQPRIHRIDGCVALIIVPTRELCLQIFDTLQL 252
Query: 124 IAPA-VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 182
+ + V L G+ VG +R K E L+ + IL+ATPGR
Sbjct: 253 LLRSFVNLVPGVIVGG-----------ERKKAEKA----------RLRKGISILIATPGR 291
Query: 183 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
L+DH+ T+ F L +LV+DE DRLL + + +L+ R+ +
Sbjct: 292 LLDHLTNTQAFQYAKLQFLVLDEADRLLDLGFGPQIGQILEKIRTKS------------- 338
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---- 298
+ +++SAT+ + LA L L P+ + E
Sbjct: 339 ----------------------AQTQNILVSATINSNVKDLASLSLQDPVLVDADEASIG 376
Query: 299 ------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE--------KCIVFTSSVES 344
T + P++L+ Y + +K + L AL L EE K +VF S+ ++
Sbjct: 377 DQSHPSTAFATPQQLKQYAITVPAKSR---LCALSCFLREELMRTEKSFKIVVFFSTCDA 433
Query: 345 THRLCTLLN 353
TL N
Sbjct: 434 VDFHFTLFN 442
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 137/321 (42%), Gaps = 72/321 (22%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNRAVRC 101
L+ +GIS P+Q E P + CI + TGSGKTL++ALPI+Q L
Sbjct: 25 LETLGISKPSPIQ-----ENCIPAILSGKDCIGCAKTGSGKTLAFALPILQKLFEDPYGI 79
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
AL++ PTR+LA Q+ D F + AVGL + VG + + L + P
Sbjct: 80 F-ALILTPTRELAFQICDQFKVVGKAVGLKECVIVGGMDMVTQGQVLAESPH-------- 130
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL DH+ + FTL+ + +LV+DE DRLL + L T+
Sbjct: 131 -------------VVVATPGRLADHLESCNTFTLKRIRFLVLDEADRLLEGHFNEQLKTI 177
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
F +L P+ ++ SAT+T
Sbjct: 178 ----------------------FAAL-----------------PKRQTLLFSATITATLE 198
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ----SLGEEKCIV 337
+L + + P F T + E + Y L+ S ++ YLV +L+ S+ + I+
Sbjct: 199 ELRNVAMTDPFFYTAPADVVTVEELDQRYVLMPVS-VREAYLVHILKRFLDSMPKGSVII 257
Query: 338 FTSSVESTHRLCTLLNHFGEL 358
FT + + L L G L
Sbjct: 258 FTGTCKGCQVLSIALKSLGFL 278
>gi|357617988|gb|EHJ71096.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 776
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 73/327 (22%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTR 111
P+Q A TI L +D+C + TG+GKT +Y +P+++ L + R R LV++PTR
Sbjct: 192 PIQAA----TIPIALLGKDICACAATGTGKTAAYMVPVLERLLYKPTERRTRVLVLVPTR 247
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+L QV V +A +++GL+VG + + S L + P
Sbjct: 248 ELGAQVHTVTRQLAQFTSVTIGLSVGGLDVKYQESVLRRHP------------------- 288
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
D+++ATPGRL+DH+ T F L + L++DE DR+L E + + +
Sbjct: 289 --DVVIATPGRLIDHVRNTPSFDLNSIEVLILDEADRMLDEYFAEQMKEI---------- 336
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
IR+C P+ M+ SAT++ LA + L P
Sbjct: 337 ------------------IRQCS----------PKRQTMLFSATMSDQVRDLAAVSLKKP 368
Query: 292 --LFLTTG-ETRYKLPERLESYKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHR 347
LFL + + + L R E ++ E + + L AL+ +++ ++F + + HR
Sbjct: 369 VKLFLDSNKDVAFNL--RQEFVRIRKERECDREAILAALVCRTFKDRAVIFVQTKKQAHR 426
Query: 348 LCTLLNHFGELRIKIKEYSGLQRQSVR 374
L L G IK+ E G Q R
Sbjct: 427 LHVALGLLG---IKVAELHGALNQPQR 450
>gi|336367410|gb|EGN95755.1| hypothetical protein SERLA73DRAFT_186962 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380126|gb|EGO21280.1| hypothetical protein SERLADRAFT_476265 [Serpula lacrymans var.
lacrymans S7.9]
Length = 779
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 65/297 (21%)
Query: 50 SLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCLRALV 106
S F + ++I L RD+ + TGSGKTL++ +P ++ L + L AL+
Sbjct: 52 SFFVEMTDIQAQSIPVALKGRDVLGAARTGSGKTLAFLIPTLEILYRKKWGPQDGLGALI 111
Query: 107 VLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 166
+ PTR+LA+Q+ +V +I S GL +G ++ DE L
Sbjct: 112 ISPTRELAVQIFEVLRSIGGNHSFSAGLVIGGKNLKDERDRL------------------ 153
Query: 167 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 226
S ++ILVATPGRL+ H++ T GF ++L LV+DE DR+L + L +L
Sbjct: 154 ----SRMNILVATPGRLLQHMDQTFGFESDNLQVLVLDEADRILDMGFSRTLSALL---- 205
Query: 227 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 286
+ LP + +L + SAT T LA+L
Sbjct: 206 -----------SHLPKSRQTL-----------------------LFSATQTDSVKDLARL 231
Query: 287 DLHHPLFLTTGETRYK--LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L P + ET + P+ LE + ++CE K L + ++S + K +VF SS
Sbjct: 232 SLKDPASIGVQETNNESATPKSLEQHYIVCELDKKLDILWSFIKSHLKAKILVFISS 288
>gi|16081434|ref|NP_393777.1| DEAD box protein [Thermoplasma acidophilum DSM 1728]
gi|10639440|emb|CAC11442.1| probable DEAD box protein [Thermoplasma acidophilum]
Length = 388
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 146/340 (42%), Gaps = 77/340 (22%)
Query: 19 VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
+ +S FE+C + LK L+ MG F AV + TI P L RDL I S T
Sbjct: 19 ISMSKFEECNIKE------DLKSDLKRMG----FVDMTAVQERTIEPALAGRDLIIRSKT 68
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
GSGKT +Y +PI+ +S R AL+VLPTR+LALQV V + + + + G
Sbjct: 69 GSGKTAAYLVPIINNIS--LGRKPSALIVLPTRELALQVHGVAEKLGHSSRIRSTVIYGG 126
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD-HINATRGF-TLE 196
+S++ +I EL+ R DI+V TPGR++D H RGF L
Sbjct: 127 ASMSRQI-ELLDR--------------------GTDIIVGTPGRILDLH---ERGFLNLS 162
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+ Y V+DE D +L + + ++ L R D + TF
Sbjct: 163 AVKYFVLDEADVMLDMGFIDDIKRMMSLLREDKQ-------TF----------------- 198
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
+LSAT+ ++ +A + P + G + E + Y I +
Sbjct: 199 --------------ILSATMPEEIIDMANDFMRDPETIIVGSDEVTVKE-IYHYYAISKR 243
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
K L L++ G +K I+F+ + T +C L + G
Sbjct: 244 NRKLHVLQTYLKTYGPQKTIIFSRTKVGTKMVCDFLLNMG 283
>gi|24374899|ref|NP_718942.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24349603|gb|AAN56386.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 409
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 31/195 (15%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +L L +G P+QV E I L ++D+ + TG+GKT ++ALPI+Q
Sbjct: 7 SLNTQLVDTLAELGYQQPTPIQV----EAIPAILTKQDVMAGAQTGTGKTAAFALPILQL 62
Query: 94 L-----SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
L S+ A + +RALV++PTR+LALQV+ F A + VG+A G
Sbjct: 63 LMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYG----------- 111
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
G+ + + + + +D+L+ATPGRL+DH+ L L LV DE DR
Sbjct: 112 --------GVSIEAQQAV--FNAGIDVLIATPGRLLDHLRQG-ALNLNQLNTLVFDEADR 160
Query: 209 LLREAYQAWLPTVLQ 223
+L + + VL+
Sbjct: 161 MLDMGFMDEIQAVLK 175
>gi|123456838|ref|XP_001316151.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121898850|gb|EAY03928.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 570
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 68/363 (18%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
SP++ LF D + +D RL L+ G S L +Q E+I RD I +
Sbjct: 7 SPLETGLFSDVDI-KAADIDSRLMSVLEKKGFSKLTNIQA----ESIKAINNSRDALICA 61
Query: 77 PTGSGKTLSYALPIVQTLSN------RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 130
TG+GKTLSY LPI L+ R + CL AL+V+PTR+L LQ++ V +
Sbjct: 62 NTGTGKTLSYLLPIFTNLAKEFPDIKREMGCL-ALIVVPTRELCLQIETVVQDLRS---- 116
Query: 131 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 190
+ V + + E + + K+ L+ +++++ TPGRL H+ +
Sbjct: 117 KMNFIVAGTLLGGEQTNVEKKA----------------LRKGLNVIITTPGRLTYHLQNS 160
Query: 191 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 250
+ T ++ Y V+DE DRLL E +Q L ++ L
Sbjct: 161 QNLTFDYFRYFVLDEADRLLSEGFQNQLVQIINLI------------------------- 195
Query: 251 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YKLP----E 305
+G + + +++SATLT L+ + L P+ + + ++ Y +P +
Sbjct: 196 ------KGKSSQSGAKYHSILVSATLTSSIESLSSIALSDPVRIGSIISKNYSVPDSILQ 249
Query: 306 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 365
R+ S +L + L L + E K IVF S++ T ++F L + +E
Sbjct: 250 RVVSVELKDKLLALLLLLKKYYTQIPEMKAIVFLSTISEVDFYATFFSYFNFLTPQERED 309
Query: 366 SGL 368
GL
Sbjct: 310 KGL 312
>gi|303288912|ref|XP_003063744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454812|gb|EEH52117.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 577
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 143/338 (42%), Gaps = 70/338 (20%)
Query: 41 VALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV- 99
+ MG ++ VQ TI P L RD+ + TGSGKTL++ +P V+ L +
Sbjct: 86 AGIATMGYETMTEVQA----RTIPPLLAGRDVLGAARTGSGKTLAFLVPSVELLYHAKFM 141
Query: 100 --RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 157
+++ PTR+LALQ+ +V + + GL +G ++ E +L+K
Sbjct: 142 PRNGAGVMILTPTRELALQIYNVTQQLMTKHSQTHGLIIGGANRRAEAEKLVK------- 194
Query: 158 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 217
V++LVATPGRL+DH+ T+GFT L +DE DR+L ++
Sbjct: 195 --------------GVNLLVATPGRLLDHMQNTKGFTFSSLKIFCMDEADRMLDIGFEEE 240
Query: 218 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 277
+ T++++ D + M+ SAT T
Sbjct: 241 MRTIVKMIPKDRQT--------------------------------------MLFSATQT 262
Query: 278 QDPNKLAQLDLHHPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
LA+L L P ++ + R +E + S+ + L L L+ ++K +
Sbjct: 263 TKVEDLARLSLKSPTYIGVDDARAVSTATGVEQGYCVVPSEKRFLLLFTFLKKNLKKKVM 322
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
VF SS S LLN+ + I + + G Q+Q R
Sbjct: 323 VFFSSCNSVKYHAELLNY---IDIPVSDIHGKQKQQRR 357
>gi|353240793|emb|CCA72645.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Piriformospora indica DSM 11827]
Length = 769
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 74/314 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAP 126
+D+ + TGSGKTL++ +PI++ L + L AL++ PTR+LA+Q+ DV I
Sbjct: 88 KDVLGAARTGSGKTLAFLIPILEVLLRKKWGPQDGLGALIISPTRELAMQIFDVLRKIGG 147
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
S GL +G ++ DE L K ++ILVATPGRL+ H
Sbjct: 148 YHTFSAGLVIGGKNLKDESDRLAK----------------------MNILVATPGRLLQH 185
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
++ T GF E+L LV+DE DR+L + L ++ LP + +
Sbjct: 186 MDQTVGFDCENLQLLVLDEADRILDMGFAKALNAIV---------------AHLPKSRQT 230
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LP 304
L + SAT T+ + LA+L L P+ + E + P
Sbjct: 231 L-----------------------LFSATQTESVSDLARLSLKDPVHVGVKEENHDAATP 267
Query: 305 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST----HRLCTLLNHFGELRI 360
+ LE Y ICE K L + +++ + K +VF S+ + C L H G +
Sbjct: 268 KGLEQYYTICELPRKLDVLFSFIKTHLQIKALVFFSTCKQVRFAFETFCKL--HPG---V 322
Query: 361 KIKEYSGLQRQSVR 374
+ G Q+QS R
Sbjct: 323 PLMHLHGKQKQSKR 336
>gi|325283382|ref|YP_004255923.1| DEAD/DEAH box helicase domain protein [Deinococcus proteolyticus
MRP]
gi|324315191|gb|ADY26306.1| DEAD/DEAH box helicase domain protein [Deinococcus proteolyticus
MRP]
Length = 612
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 139/324 (42%), Gaps = 72/324 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P L L GI+ P+Q E++ L RDL + TG+GKTL++ALPI+Q L
Sbjct: 9 PALAARLAERGITEASPIQA----ESLPHTLQGRDLIGRARTGTGKTLAFALPIIQGLEP 64
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
S R RA+VV PTR+LA QV F E++ L +
Sbjct: 65 SRERSRLPRAIVVAPTRELARQVAAEF-----------------EQTGRELTVLT----V 103
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREA 213
G Y P++ L+ VD++V TPGRL+DH+ RG L+ + Y V+DE D +L
Sbjct: 104 YGGAAYGPQETA--LRRGVDVVVGTPGRLIDHLE--RGNLDLQEVKYAVLDEADEMLSVG 159
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+ + T+L+ T P R ++ S
Sbjct: 160 FADAIETILKTT-------------------------------------PEGRQT-LLFS 181
Query: 274 ATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 332
ATLT + +L+ L+ PL + GE + + + +E K+ + + L LL
Sbjct: 182 ATLTPEIRRLSNKYLNDPLVVDMVGEGKSQAAQTVEHLKVRV-GRSRTRVLADLLTVYNP 240
Query: 333 EKCIVFTSSVESTHRLCTLLNHFG 356
EK IVFT + T L L H G
Sbjct: 241 EKAIVFTRTKRETDELALELIHRG 264
>gi|26344732|dbj|BAC36015.1| unnamed protein product [Mus musculus]
Length = 660
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG + +Q ++I P L RDL + TGSG
Sbjct: 164 FEDTSFASLSNLVNENTLK-AIEEMGFKRMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 218
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P+++ L L++ PTR+LA+Q V + + GL +G
Sbjct: 219 KTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 278
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E+ Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 279 SNRSAEV---------------------QKLLNGINIIVATPGRLLDHMQNTPGFMYKNL 317
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 318 QCLVIDEADRILDVGFEEELKQIIKL---------------LPA---------------- 346
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETR-YKLPERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 347 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPS 399
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 400 EKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 454
>gi|149033136|gb|EDL87954.1| rCG37594 [Rattus norvegicus]
Length = 623
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG + +Q ++I P L RDL + TGSG
Sbjct: 127 FEDTSFASLSNLVNENTLK-AIEEMGFKHMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 181
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P+++ L L++ PTR+LA+Q V + + GL +G
Sbjct: 182 KTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 241
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E+ Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 242 SNRSAEV---------------------QKLLNGINIVVATPGRLLDHMQNTPGFMYKNL 280
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 281 QCLVIDEADRILDVGFEEELKQIIKL---------------LPA---------------- 309
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETR-YKLPERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 310 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPS 362
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 363 EKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 417
>gi|440902879|gb|ELR53614.1| Putative ATP-dependent RNA helicase DDX27, partial [Bos grunniens
mutus]
Length = 741
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 72/360 (20%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 149 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 203
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV V +A ++ LAV
Sbjct: 204 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAV 263
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + EA L++A DIL+ATPGRL+DH++ F L
Sbjct: 264 GGLDVKSQ----------EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLS 302
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+ L++DE DR+L E ++ + + IR C
Sbjct: 303 SIEVLILDEADRMLDEYFEEQMKEI----------------------------IRMCSHH 334
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
R M+ SAT+T + LA + L +P+ + P + + I +
Sbjct: 335 RQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN 384
Query: 317 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + + ALL + ++FT + + HR+ LL G +++ E G Q+ R
Sbjct: 385 REGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQR 441
>gi|242005222|ref|XP_002423470.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212506558|gb|EEB10732.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 422
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 66/297 (22%)
Query: 65 PGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + E + CI + TGSGKTL++ALPI+Q LS ALV+ PTR+LA Q+ + F A
Sbjct: 35 PKILEGNDCIGCAKTGSGKTLAFALPILQKLSEEPFGIF-ALVLTPTRELAFQIGEQFLA 93
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
+ L + + G + + EL KRP I+V+TPGRL
Sbjct: 94 YGKVINLKLCVISGGMDMVTQGQELSKRPH---------------------IVVSTPGRL 132
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
DH+++ F+L+ + +LV+DE DRLL + + T+
Sbjct: 133 ADHLDSCNTFSLKKIRFLVLDEADRLLSGQFDDQISTI---------------------- 170
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 303
FK P + + ++ SAT+ D K A+ L +F ++
Sbjct: 171 ---------------FKSLPLKKQI-LLFSATI-NDTLKQAEELLSKNVFSFIDKSDVAT 213
Query: 304 PERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFG 356
+ L+ + ++C +K YLV ++Q + I+FT + + L LN G
Sbjct: 214 VDNLQQFYVLCPDHVKDAYLVEVIQLYRKNNENGNIIIFTDTCRNCQLLSMTLNEVG 270
>gi|320581178|gb|EFW95399.1| ATP-dependent RNA helicase DBP7 (DEAD-box protein 7) [Ogataea
parapolymorpha DL-1]
Length = 649
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 152/343 (44%), Gaps = 73/343 (21%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF-- 68
VL +P+D S F L+ R+ L I + P ++ Q+ + P L
Sbjct: 111 VLSPSNAPLDTSSFSGL------GLNDRINAHLLGQRIEN--PTKI---QQQVIPRLLAG 159
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSN----RAVRCLRALVVLPTRDLALQVKDVFAAI 124
DL + + TGSGKTL++ALPI Q L L AL++ PTR+LA Q+ VF ++
Sbjct: 160 NNDLFVQAQTGSGKTLAFALPIFQKLMEIPNIDRTSGLFALILAPTRELATQIYSVFESL 219
Query: 125 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE---LQSAVDILVATPG 181
+ K+ AG E E L+ V+ILVATPG
Sbjct: 220 SRC-----------------------HHKIVAGNVIGGEKKKSEKARLRKGVNILVATPG 256
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RL+DHI T+ L + Y+V+DE DRL+ ++ + +L S +ST +P
Sbjct: 257 RLVDHIEHTQKLDLSKIRYVVLDEGDRLMELGFEESITKILH----------SISSTAVP 306
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
+ SL R + ++ SAT+ KL +L L +TT E
Sbjct: 307 LQYPSLPAKR----------------ISILCSATIKSTVKKLGELSLEKAELVTTSEQIT 350
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTS 340
K+P++L ++ KL+ + L L++L ++ + IVF S
Sbjct: 351 KVPDQLVQQVVVIPPKLRFVTLAGTLKNLIKDQTASRTIVFFS 393
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 149/340 (43%), Gaps = 74/340 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---A 98
A + +G ++ P+Q A+ I L RD+C + TGSGKT ++ALP+++ + +R A
Sbjct: 224 ACEKLGYATPTPIQAAI----IPIALTGRDVCGRAQTGSGKTAAFALPLLERMLHRPKNA 279
Query: 99 VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 158
V + ++++PTR+LA+Q + + + V VG S+ + + L +RP
Sbjct: 280 VSAIHVVIMVPTRELAVQCAQMIQRLGEYTNVQVATIVGGLSMERQAAALRQRP------ 333
Query: 159 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 218
+I+VATPGRL+DH+ T F E + +V+DE DRLL +L
Sbjct: 334 ---------------EIVVATPGRLIDHVRNTHSFGFEDVAAVVLDEADRLLE---MGFL 375
Query: 219 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLT 277
+ ++ R+ PR + +L SATLT
Sbjct: 376 EEIKEIVRN------------------------------------MPRQRQTLLFSATLT 399
Query: 278 QDPNKLAQLDLHHPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
+LA L + +P L+ G T L E + K +K + L L +S ++
Sbjct: 400 SAVEELASLSMRNPARLSADSLGTTPMTLTEEIVKIKPQFVAKKEAHLLSLLSRSFKGKE 459
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
IVF + HRL +L G IK E G Q+ R
Sbjct: 460 TIVFAKTKVQAHRLKIVL---GLSNIKACELHGDMTQTQR 496
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 77/363 (21%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 230 SQYDESLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 279
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVG 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV V +A ++
Sbjct: 280 AATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTC 339
Query: 134 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 193
LAVG + + EA L++A DIL+ATPGRL+DH++ F
Sbjct: 340 LAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLIDHLHNCPSF 378
Query: 194 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 253
L + L++DE DR+L E ++ + + IR C
Sbjct: 379 HLSSIEVLILDEADRMLDEYFEEQMKEI----------------------------IRMC 410
Query: 254 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 313
R M+ SAT+T + LA + L +P+ + P + + I
Sbjct: 411 SHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 460
Query: 314 CESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 371
++ + + ALL + ++FT + + HR+ LL G +++ E G Q
Sbjct: 461 RPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQ 517
Query: 372 SVR 374
+ R
Sbjct: 518 TQR 520
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 64/318 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLALQ 116
+ E I L +D+ + TG GKT ++ALPI+ L + V+ PTR+LA+Q
Sbjct: 35 IXTEAIPIALEGKDVTGLAQTGYGKTGAFALPILHALLEAPRPKHFFDCVLSPTRELAIQ 94
Query: 117 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 176
+ + F A+ +G+ + VG + + ++ K+P I+
Sbjct: 95 IAEQFEALGSXIGVKCAVLVGGIDMVQQSIKIAKQP---------------------HII 133
Query: 177 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 236
V TP R++DH+ T+GF+L L YLV+DE DRLL E ++ L +LQ+ + +
Sbjct: 134 VGTPRRVLDHLKHTKGFSLGRLKYLVLDEADRLLNEDFEESLNEILQMIPRERK------ 187
Query: 237 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 296
TFL SAT+T+ KL ++ L +P+ +
Sbjct: 188 -TFL-------------------------------FSATMTKKVQKLQRVCLRNPVKIEA 215
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
++Y + L+ L +K K Y V +L + +VFT + ++T L +L + G
Sbjct: 216 -SSKYSTVDTLKQQYLFLPAKHKDCYFVYILTEMSGSTSMVFTCTCDATRLLALILRNLG 274
Query: 357 ELRIKIKEYSGLQRQSVR 374
I I +G QS R
Sbjct: 275 LKAIPI---NGHMSQSKR 289
>gi|344279740|ref|XP_003411645.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Loxodonta africana]
Length = 822
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 72/360 (20%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 236 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 290
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV V +A ++ LAV
Sbjct: 291 GTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAV 350
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + EA L++A DIL+ATPGRL+DH++ F L
Sbjct: 351 GGLDVKSQ----------EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLS 389
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+ L++DE DR+L E ++ + + IR C
Sbjct: 390 SIEVLILDEADRMLDEYFEEQMKEI----------------------------IRMCSHH 421
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
R M+ SAT+T + LA + L +P+ + P + + I +
Sbjct: 422 R----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN 471
Query: 317 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + + ALL + ++FT + + HR+ LL G +++ E G Q+ R
Sbjct: 472 REGDREAIVAALLTRTFSDHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQR 528
>gi|31981163|ref|NP_080136.2| ATP-dependent RNA helicase DDX18 [Mus musculus]
gi|56404614|sp|Q8K363.1|DDX18_MOUSE RecName: Full=ATP-dependent RNA helicase DDX18; AltName: Full=DEAD
box protein 18
gi|20380248|gb|AAH28246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|75517578|gb|AAI03777.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|148707837|gb|EDL39784.1| mCG1040626 [Mus musculus]
gi|187954459|gb|AAI41231.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|187954929|gb|AAI41232.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
Length = 660
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 74/358 (20%)
Query: 24 FEDCPLDHLPCL--DPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
FED L L + LK A++ MG + +Q ++I P L RDL + TGSG
Sbjct: 164 FEDTSFASLSNLVNENTLK-AIEEMGFKRMTEIQ----HKSIRPLLEGRDLLAAAKTGSG 218
Query: 82 KTLSYALPIVQ---TLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQ 138
KTL++ +P+++ L L++ PTR+LA+Q V + + GL +G
Sbjct: 219 KTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGG 278
Query: 139 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 198
S+ + E+ Q+L + ++I+VATPGRL+DH+ T GF ++L
Sbjct: 279 SNRSAEV---------------------QKLLNGINIIVATPGRLLDHMQNTPGFMYKNL 317
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
LV+DE DR+L ++ L +++L LP+
Sbjct: 318 QCLVIDEADRILDVGFEEELKQIIKL---------------LPA---------------- 346
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTGETR-YKLPERLESYKLICES 316
R M+ SAT T+ LA++ L PL++ + + + LE ++C S
Sbjct: 347 -------RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPS 399
Query: 317 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + L L L+ ++K +VF SS S LLN+ + + + G Q+Q+ R
Sbjct: 400 EKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNY---IDLPVLAIHGKQKQNKR 454
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 65/301 (21%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+Q+A I L RD+ + TGSGKT ++ +P++ L R + +V+ P+R+
Sbjct: 57 PIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQR-IYCVVLAPSRE 111
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
L Q+ + F A++ ++ L V + +G + + S L KRP
Sbjct: 112 LCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPH------------------- 152
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
++VA+PGRL DH+ T+GF+L + LV+DE DRLL + + L ++ ++ +
Sbjct: 153 --VIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQ-- 208
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ +KL ++ L P+
Sbjct: 209 -----TFL-------------------------------FSATMTKKLSKLQKMALKDPI 232
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
+ + +Y E L+ L+ K K YL ALL IVF + + R L
Sbjct: 233 SVQVDD-KYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYL 291
Query: 353 N 353
Sbjct: 292 K 292
>gi|336270890|ref|XP_003350204.1| hypothetical protein SMAC_01096 [Sordaria macrospora k-hell]
gi|380095599|emb|CCC07072.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 507
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 64/285 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q E+I L RD+ + TGSGKT ++ALPI+Q L ++ +
Sbjct: 111 ACERLGYKNPTPIQA----ESIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKP-QP 165
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 166 LFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPH-------- 217
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L + YLV+DE DRLL + L +
Sbjct: 218 -------------VIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKI 264
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 265 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 286
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVAL 326
L + L PL ++ +Y L+S + K YLV L
Sbjct: 287 SLQRASLRDPLKVSVSTNKYATVSTLKSNYVFIPHMHKDTYLVYL 331
>gi|354503106|ref|XP_003513622.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Cricetulus griseus]
Length = 710
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 82/314 (26%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALVVLPT 110
+V +++I L RD + S TGSGKTL+Y +P+VQ+L + R ALV++PT
Sbjct: 150 TSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPT 209
Query: 111 RDLALQVKD-VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
R+LALQ D V + P + G+ +G E + L K
Sbjct: 210 RELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK------------------- 250
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
++IL++TPGRL+DHI +T+ + +LVVDE DR+L ++ + +L ++
Sbjct: 251 --GINILISTPGRLVDHIRSTKNIHFNRIQWLVVDEADRILDLGFEKDITVILNAVNAEC 308
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ R ++LSATLT+ +LA + LH
Sbjct: 309 QKR-----------------------------------QNVLLSATLTEGVTRLADISLH 333
Query: 290 HPLFL----------------TTGETRYKLPERLESYKLICESKLKPLYLVALL----QS 329
+P+ + +T + +PE L+ + ++ SKL+ + L A + +
Sbjct: 334 NPVSISVLDKIWDQPNPKEDASTQLDSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKF 393
Query: 330 LGEEKCIVFTSSVE 343
++K IVF SS E
Sbjct: 394 EKDQKMIVFFSSCE 407
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 145/336 (43%), Gaps = 69/336 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL + G +S P+Q A TI L +D+ + TGSGKT ++ +PI++ L R+
Sbjct: 200 ALTSAGFNSPTPIQAA----TIPVALLGKDVVGGAVTGSGKTAAFIIPILERLLYRSRDA 255
Query: 102 -LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 160
R LV++PTR+LA+Q V + + L VG S+ + + L RP
Sbjct: 256 HTRVLVLVPTRELAVQCHAVAEKLGTFTDVRCALIVGGLSLKAQEATLRTRP-------- 307
Query: 161 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 220
D++VATPGRL+DH+ +R F L+ L LV+DE DR+L + + L
Sbjct: 308 -------------DLVVATPGRLIDHLRNSRSFALDALDVLVLDEADRMLSDGFADELKE 354
Query: 221 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 280
++Q S T R+ M+ SAT+T D
Sbjct: 355 IVQ----------------------SCPTGRQT----------------MLFSATMTDDV 376
Query: 281 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK--LKPLYLVALLQSLGEEKCIVF 338
L +L L HP+ L ++ ++ + + K +P LVAL Q + I+F
Sbjct: 377 ETLIRLSLRHPVRLFVDPSKQTARGLVQEFVRVRAGKEAERPALLVALCQRTARKGVIIF 436
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
S + H+ + FG +K E G Q R
Sbjct: 437 FRSKKLAHQFRVV---FGLCGLKALELHGNLTQEQR 469
>gi|301093251|ref|XP_002997474.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262110730|gb|EEY68782.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 489
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 72/378 (19%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE ++ S VD F LP +P K AL +MG + + +Q +
Sbjct: 80 EETEQAIAEATNLAESTVDERYFSSEEFASLPLSEPTRK-ALVDMGFTKMTKIQ----SK 134
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVK 118
+I P L +DL + TGSGKTLS+ +P V+ L A + +V+ PTR+LALQ+
Sbjct: 135 SIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIY 194
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
V I + G+ +G ++ E L+K V+IL++
Sbjct: 195 GVVRDICKYHSQTHGIVMGGANRRAEAERLVK---------------------GVNILIS 233
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 238
TPGRL+DH+ T+ F +L LV+DE DR+L ++ + +++ + +
Sbjct: 234 TPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQT------- 286
Query: 239 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL-HHPLFLTTG 297
M+ SAT T+ LA+L + P+++
Sbjct: 287 -------------------------------MLFSATQTKKVEDLARLSIKEKPVYVGVE 315
Query: 298 ETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 356
E K LE ++ S + L L L+ ++K +VF SS + LLN+
Sbjct: 316 EEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNY-- 373
Query: 357 ELRIKIKEYSGLQRQSVR 374
+ I + + G Q+Q+ R
Sbjct: 374 -IDIPVLDIHGKQKQNKR 390
>gi|122692565|ref|NP_001073740.1| probable ATP-dependent RNA helicase DDX27 [Bos taurus]
gi|142980808|sp|A1A4H6.1|DDX27_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|119223998|gb|AAI26498.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Bos taurus]
gi|296481114|tpg|DAA23229.1| TPA: probable ATP-dependent RNA helicase DDX27 [Bos taurus]
Length = 765
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 72/360 (20%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAV 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV V +A ++ LAV
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAV 293
Query: 137 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 196
G + + EA L++A DIL+ATPGRL+DH++ F L
Sbjct: 294 GGLDVKSQ----------EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLS 332
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 256
+ L++DE DR+L E ++ + + IR C
Sbjct: 333 SIEVLILDEADRMLDEYFEEQMKEI----------------------------IRMCSHH 364
Query: 257 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 316
R M+ SAT+T + LA + L +P+ + P + + I +
Sbjct: 365 RQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN 414
Query: 317 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 374
+ + + ALL + ++FT + + HR+ LL G +++ E G Q+ R
Sbjct: 415 REGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQR 471
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,680,721,480
Number of Sequences: 23463169
Number of extensions: 230117746
Number of successful extensions: 640879
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4030
Number of HSP's successfully gapped in prelim test: 20891
Number of HSP's that attempted gapping in prelim test: 577891
Number of HSP's gapped (non-prelim): 32013
length of query: 375
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 231
effective length of database: 8,980,499,031
effective search space: 2074495276161
effective search space used: 2074495276161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)