Query 017197
Match_columns 375
No_of_seqs 155 out of 1513
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:27:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017197hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 1.1E-48 2.4E-53 373.6 24.7 285 16-304 49-387 (390)
2 PLN03145 Protein phosphatase 2 100.0 4.8E-44 1E-48 349.7 30.0 237 40-332 74-333 (365)
3 KOG0697 Protein phosphatase 1B 100.0 3E-43 6.6E-48 318.8 23.3 251 31-334 21-296 (379)
4 KOG0698 Serine/threonine prote 100.0 4.7E-42 1E-46 333.4 29.0 243 34-335 42-310 (330)
5 PTZ00224 protein phosphatase 2 100.0 3E-41 6.5E-46 331.2 28.3 239 34-332 24-274 (381)
6 PF00481 PP2C: Protein phospha 100.0 1.3E-41 2.9E-46 319.2 18.7 225 34-295 2-249 (254)
7 COG0631 PTC1 Serine/threonine 100.0 1.4E-38 3.1E-43 299.6 24.9 220 37-332 14-255 (262)
8 KOG0699 Serine/threonine prote 100.0 2.9E-36 6.2E-41 281.9 15.3 176 119-336 330-510 (542)
9 smart00332 PP2Cc Serine/threon 100.0 2.3E-33 5E-38 261.9 27.7 229 35-326 9-255 (255)
10 cd00143 PP2Cc Serine/threonine 100.0 2.7E-33 5.8E-38 260.7 27.8 231 35-328 4-254 (254)
11 PRK14559 putative protein seri 100.0 1.9E-33 4.1E-38 290.5 26.9 223 42-332 387-638 (645)
12 KOG1323 Serine/threonine phosp 99.9 1.7E-26 3.7E-31 214.5 19.3 238 54-332 141-490 (493)
13 KOG1379 Serine/threonine prote 99.9 1.8E-23 3.9E-28 194.5 21.0 217 42-328 88-330 (330)
14 KOG0618 Serine/threonine phosp 99.8 1.4E-18 2.9E-23 180.7 16.3 232 34-332 524-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.7 2E-17 4.3E-22 150.7 14.6 174 39-278 6-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 3.7E-16 8E-21 140.2 19.4 176 35-290 7-190 (193)
17 TIGR02865 spore_II_E stage II 99.5 1.4E-13 3.1E-18 147.1 18.3 192 37-328 559-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.3 9.4E-11 2E-15 104.8 18.7 178 55-329 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.4 1.6E-05 3.5E-10 78.7 18.9 199 34-329 151-366 (367)
20 PRK10693 response regulator of 69.2 96 0.0021 29.6 12.5 98 39-146 144-254 (303)
21 PF09436 DUF2016: Domain of un 36.2 21 0.00046 26.7 1.3 19 248-267 23-42 (72)
22 PF01436 NHL: NHL repeat; Int 24.7 1.6E+02 0.0034 17.3 3.6 21 126-146 8-28 (28)
23 COG2168 DsrH Uncharacterized c 24.0 65 0.0014 25.5 2.2 33 246-279 20-52 (96)
24 PF06319 DUF1052: Protein of u 21.4 60 0.0013 28.1 1.7 33 20-69 78-118 (157)
25 PRK06369 nac nascent polypepti 21.1 3.1E+02 0.0068 22.5 5.8 44 235-278 37-87 (115)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=373.56 Aligned_cols=285 Identities=50% Similarity=0.823 Sum_probs=257.5
Q ss_pred CCCCceeeccCCCCCcCceeeEEecCC-------cccCCceeee--cCCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH-
Q 017197 16 GGDGLMWHSDLKPHASGDYSIAVVQAN-------SCLEDQSQVF--TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHR- 85 (375)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~r-------~~~eD~~~~~--~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~- 85 (375)
+.+++.|..+...+..+++++++.+.+ ...||+..+. ....+.|+||||||||.+++++++++|..++..
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 457799999999999999999888774 4556666544 367889999999999999999999999998881
Q ss_pred ---------------------------------------hhHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccccceEEEE
Q 017197 86 ---------------------------------------LSAEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVG 126 (375)
Q Consensus 86 ---------------------------------------~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~ 126 (375)
...++|.+||.++++.|.+...+.+...+....+|+||+|+
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 44678999999999999999999999999999999999999
Q ss_pred EEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEeecCeeeecCccccccc
Q 017197 127 AISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRS 206 (375)
Q Consensus 127 ~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRa 206 (375)
++.++.|||||+||||++|.+....++ .+.+.|||+||+.+++.|+.||...||.....++... ||+.|.|.+|||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~--~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRA 284 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVENNGS--WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRA 284 (390)
T ss_pred EEeCCeEEEEecCcchhhhceecCCCC--eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeee
Confidence 999999999999999999987774332 4789999999999999999999999999988888876 899999999999
Q ss_pred cCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHHHHHHHHHc-----CCcc
Q 017197 207 IGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCK-----NPRA 281 (375)
Q Consensus 207 lGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~ei~~iv~~-----~~~~ 281 (375)
|||.++|++.+..+++.+.|.-+.++++|+|+++|.++.++|.|.|+||||+|||||++|+++|+++++.. .+.+
T Consensus 285 fGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~ 364 (390)
T KOG0700|consen 285 FGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDG 364 (390)
T ss_pred ccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCC
Confidence 99999999999989999999999999999999999999999999999999999999999999999999998 6778
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhH
Q 017197 282 GIAKRLVRAALQEAARKREVGYK 304 (375)
Q Consensus 282 ~~a~~Lv~~A~~~~~~~~~~~~~ 304 (375)
+.|++|++.|+..+++.+.-.|+
T Consensus 365 ~~A~hLIr~aL~~aakk~~~r~s 387 (390)
T KOG0700|consen 365 NPATHLIRHALGRAAKKRGMRLS 387 (390)
T ss_pred CHHHHHHHHHHhhhhhhccccHh
Confidence 99999999999999875544444
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=4.8e-44 Score=349.69 Aligned_cols=237 Identities=30% Similarity=0.467 Sum_probs=194.1
Q ss_pred cCCcccCCceeeecC------------CCcEEEEEEcCCCchHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHH
Q 017197 40 QANSCLEDQSQVFTS------------PSATYVGVYDGHGGPEASRFVNKHLFPYLHR------LSAEVIKKAFHATEEE 101 (375)
Q Consensus 40 ~~r~~~eD~~~~~~~------------~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~------~~~~~l~~a~~~~~~~ 101 (375)
+.|+.|||+|++..+ ....||||||||||+.+++++++++++.|.+ .....|.++|..+++.
T Consensus 74 G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al~~af~~~d~~ 153 (365)
T PLN03145 74 GSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTA 153 (365)
T ss_pred cCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHhHH
Confidence 349999999875421 2358999999999999999999999999876 3356688889888888
Q ss_pred HHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhC
Q 017197 102 FLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALH 181 (375)
Q Consensus 102 l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~ 181 (375)
|.+... .. ....+|||++++++.++.+|++||||||+|+++.+ ++++||+||++.++.|+.||.+.
T Consensus 154 ~~~~~~----~~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g--------~~~~LT~DH~~~~~~E~~RI~~~- 219 (365)
T PLN03145 154 FAEACS----LD-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG--------KAIEMSRDHKPMCSKERKRIEAS- 219 (365)
T ss_pred HHhhhc----cc-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC--------eEEEecCCCCCCCHHHHHHHHHc-
Confidence 765432 11 12348999999999999999999999999999998 89999999999999999999876
Q ss_pred CCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccC
Q 017197 182 PDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDG 261 (375)
Q Consensus 182 p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDG 261 (375)
++.+.. .+++|.+++||||||..+|... ....+.++++|++..+.+.++|.||||||||
T Consensus 220 ---Gg~v~~----g~v~g~l~vTRalGD~~~k~~k--------------~~~~~~vs~ePdv~~~~l~~~D~fLILaSDG 278 (365)
T PLN03145 220 ---GGYVYD----GYLNGQLNVARALGDWHMEGMK--------------GSDGGPLSAEPELMTTQLTEEDEFLIIGCDG 278 (365)
T ss_pred ---CCceec----ceECCccccccccccccccccc--------------cccCCCcceEEEEEEEECCCCCEEEEEeCCc
Confidence 344432 2788999999999998776421 0112347899999999999999999999999
Q ss_pred CccCCCHHHHHHHHHc-----CCcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCC
Q 017197 262 LWEQLTDEAAVEIVCK-----NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 262 lwd~l~~~ei~~iv~~-----~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~ 332 (375)
|||+|++++++++++. .+++.+|..|++.|+. +++.||||||||+|+...
T Consensus 279 Lwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~---------------------rgs~DNITvIVV~l~~~~ 333 (365)
T PLN03145 279 IWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK---------------------RKSGDNLAVVVVCFQSQP 333 (365)
T ss_pred cccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------CCCCCCEEEEEEEeecCC
Confidence 9999999998777653 2556788999999987 557999999999999864
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=318.78 Aligned_cols=251 Identities=22% Similarity=0.374 Sum_probs=213.4
Q ss_pred cCceeeEEecC-CcccCCceeee-----cCCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH--------------hhHHH
Q 017197 31 SGDYSIAVVQA-NSCLEDQSQVF-----TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHR--------------LSAEV 90 (375)
Q Consensus 31 ~~~~~~~~~~~-r~~~eD~~~~~-----~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~--------------~~~~~ 90 (375)
--.|.++++|| |-.|||++.+. ..++|+||+|||||.|+.+|.+++++|.+.+.. +.+..
T Consensus 21 glryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~G 100 (379)
T KOG0697|consen 21 GLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEKG 100 (379)
T ss_pred ceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhh
Confidence 44599999999 88999999766 347899999999999999999999999999876 34556
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCC
Q 017197 91 IKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGV 170 (375)
Q Consensus 91 l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~ 170 (375)
|+..|...++-+..... ......++|||++.+++....+|++|+||||++++|++ ++..-|+||+|.+
T Consensus 101 IrtGFL~iDE~mr~~~~----~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng--------~~~f~TqDHKP~~ 168 (379)
T KOG0697|consen 101 IRTGFLSIDEIMRTLSD----ISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG--------EVVFSTQDHKPYL 168 (379)
T ss_pred HhhcceeHHHHHhhhhh----hhcccccCCceEEEEEecCceEEEEecCcchhheecCC--------ceEEeccCCCCCC
Confidence 77778888776655433 22333458999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHhhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCC
Q 017197 171 EEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRP 250 (375)
Q Consensus 171 ~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~ 250 (375)
+.|++||+.+ +|-+.-. |++|.|+++|||||+.||.... .++..++|+++|++....-+.
T Consensus 169 p~EkeRIqnA----GGSVMIq----RvNGsLAVSRAlGDydyK~v~~------------kgp~eQlVSPEPev~~~~R~e 228 (379)
T KOG0697|consen 169 PKEKERIQNA----GGSVMIQ----RVNGSLAVSRALGDYDYKNVPG------------KGPTEQLVSPEPEVYIIERSE 228 (379)
T ss_pred hHHHHHHhcC----CCeEEEE----EecceeeeehhccCcccccCCC------------CCchhcccCCCCceEEeeccc
Confidence 9999999988 4555544 9999999999999999987642 456789999999999999888
Q ss_pred CCeEEEEeccCCccCCCHHHHHHHHHcC-----CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEE
Q 017197 251 QDLFLIFASDGLWEQLTDEAAVEIVCKN-----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIV 325 (375)
Q Consensus 251 ~D~~LvLaSDGlwd~l~~~ei~~iv~~~-----~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIv 325 (375)
.|+|||||+||+||+|+++|+.++++.. +....+..+++.++.++ +.||+|+|+
T Consensus 229 edeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKG---------------------SRDNMsivl 287 (379)
T KOG0697|consen 229 EDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKG---------------------SRDNMSIVL 287 (379)
T ss_pred cCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhcc---------------------CccCceEEE
Confidence 8889999999999999999999999874 45567777777777744 689999999
Q ss_pred EEcCCCCCC
Q 017197 326 IYLDHHQKG 334 (375)
Q Consensus 326 v~l~~~~~~ 334 (375)
|-|....+.
T Consensus 288 vcfp~APkv 296 (379)
T KOG0697|consen 288 VCFPGAPKV 296 (379)
T ss_pred EecCCCCCC
Confidence 999876643
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=333.37 Aligned_cols=243 Identities=39% Similarity=0.601 Sum_probs=205.4
Q ss_pred eeeEEecC-CcccCCceeeec--------CC-CcEEEEEEcCCCchHHHHHHHHHHHHHHHH---------hhHHHHHHH
Q 017197 34 YSIAVVQA-NSCLEDQSQVFT--------SP-SATYVGVYDGHGGPEASRFVNKHLFPYLHR---------LSAEVIKKA 94 (375)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~--------~~-~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~---------~~~~~l~~a 94 (375)
++.+..++ |..|||++.... .. ...||||||||||..+|+|+.++|+..+.+ .....+.++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 45556666 788999986551 22 478999999999999999999999999987 156788899
Q ss_pred HH-HHHHHHHHHHHHhCCCCCCcccccceEEEEEEeCC-EEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHH
Q 017197 95 FH-ATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISND-VLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEE 172 (375)
Q Consensus 95 ~~-~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~-~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~ 172 (375)
|. .++..+.+. ......+|||++++++.++ .|||||+||||++|++.+ + .+++||.||+|..+.
T Consensus 122 F~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~----~a~~Ls~DHkP~~~~ 187 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G----VAVQLSVDHKPDRED 187 (330)
T ss_pred HHHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C----eeeeCCCCCCCCcHH
Confidence 99 588888865 1113457888888888855 999999999999999875 2 799999999999999
Q ss_pred HHHHHHhhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCC
Q 017197 173 VRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQD 252 (375)
Q Consensus 173 e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D 252 (375)
|+.||.+. +|.+....+.||+.|.|++||+|||..+|. +.|+++|++....+.+.|
T Consensus 188 E~~RI~~~----GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~d 243 (330)
T KOG0698|consen 188 ERERIEAA----GGRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDD 243 (330)
T ss_pred HHHHHHHc----CCEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCC
Confidence 99999998 677877777899999999999999998863 569999999999999999
Q ss_pred eEEEEeccCCccCCCHHHHHHHHHcC-----CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEE
Q 017197 253 LFLIFASDGLWEQLTDEAAVEIVCKN-----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIY 327 (375)
Q Consensus 253 ~~LvLaSDGlwd~l~~~ei~~iv~~~-----~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~ 327 (375)
+||||+||||||+|+++|++++++.. ....++..|...|+. |++.||||||||.
T Consensus 244 eFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~---------------------~~s~DnitvvvV~ 302 (330)
T KOG0698|consen 244 EFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS---------------------RGSKDNITVVVVR 302 (330)
T ss_pred cEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh---------------------cCCCCCeEEEEEE
Confidence 99999999999999999999999983 344566677777666 6689999999999
Q ss_pred cCCCCCCC
Q 017197 328 LDHHQKGS 335 (375)
Q Consensus 328 l~~~~~~~ 335 (375)
|....+..
T Consensus 303 l~~~~~~~ 310 (330)
T KOG0698|consen 303 LKSSPKSP 310 (330)
T ss_pred ecCccccc
Confidence 99987543
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=3e-41 Score=331.16 Aligned_cols=239 Identities=26% Similarity=0.364 Sum_probs=195.7
Q ss_pred eeeEEecC-CcccCCceeeecCCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHH
Q 017197 34 YSIAVVQA-NSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHR----LSAEVIKKAFHATEEEFLRLVKR 108 (375)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~----~~~~~l~~a~~~~~~~l~~~~~~ 108 (375)
|..++.+| |+.|||++.+...++..||||||||||..+|++++++|...+.+ .....|++++..+++++.+..
T Consensus 24 ~g~~s~~G~R~~nED~~~v~~~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~~~~~l~~a~~~~d~~i~~~~-- 101 (381)
T PTZ00224 24 CASACVNGYRESMEDAHLLYLTDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPMTDERMEELCLEIDEEWMDSG-- 101 (381)
T ss_pred EEEEeCCCCCCCCCCeeEeccCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHhcc--
Confidence 44445555 99999998877666778999999999999999999999988865 234458888888888776421
Q ss_pred hCCCCCCcccccceEEEEEEe-CCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCce
Q 017197 109 VLPVRPQIASVGSCCLVGAIS-NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHI 187 (375)
Q Consensus 109 ~~~~~~~~~~~GtT~~v~~i~-~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~ 187 (375)
..+|||++++++. ++.+||+||||||+|++|++ ++++||+||++.++.|+.||...+ +.
T Consensus 102 --------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g--------~~~~LT~DH~~~~~~E~~RI~~~g----g~ 161 (381)
T PTZ00224 102 --------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG--------KLVFATEDHKPNNPGERQRIEACG----GR 161 (381)
T ss_pred --------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC--------EEEEcccCCCCCCHHHHhHHHHcc----CE
Confidence 1358999988876 67999999999999999988 899999999999999999998763 33
Q ss_pred EEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCcc-CC
Q 017197 188 VVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE-QL 266 (375)
Q Consensus 188 ~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd-~l 266 (375)
+.. +|+.|.+++|||||+..+|..+. .+..++.|+++|++..+.+.++| ||||||||||| ++
T Consensus 162 v~~----~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~l 224 (381)
T PTZ00224 162 VVS----NRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNF 224 (381)
T ss_pred ecc----ccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCcc
Confidence 322 38889999999999988875431 12345568999999999999888 78899999999 89
Q ss_pred CHHHHHHHHHc-----CCcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCC
Q 017197 267 TDEAAVEIVCK-----NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 267 ~~~ei~~iv~~-----~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~ 332 (375)
+++|+.+++.. .+.+.+|..|++.|+. +|+.||||||||++....
T Consensus 225 s~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~---------------------rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 225 SNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR---------------------RGSKDNISCLIVQLKDGA 274 (381)
T ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------cCCCCCEEEEEEEeeCCC
Confidence 99999999873 3556789999999988 557999999999998765
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.3e-41 Score=319.24 Aligned_cols=225 Identities=35% Similarity=0.575 Sum_probs=180.1
Q ss_pred eeeEEecC-CcccCCceeeec-------CCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH--------hhHHHHHHHHHH
Q 017197 34 YSIAVVQA-NSCLEDQSQVFT-------SPSATYVGVYDGHGGPEASRFVNKHLFPYLHR--------LSAEVIKKAFHA 97 (375)
Q Consensus 34 ~~~~~~~~-r~~~eD~~~~~~-------~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~--------~~~~~l~~a~~~ 97 (375)
|+++.+++ |+.|||++.+.. ..+..+|+|||||||..+++++++.++..+.+ ...+.|.++|..
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~ 81 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLA 81 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeee
Confidence 56666666 999999998774 34668999999999999999999999988876 245778888888
Q ss_pred -HHHHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEE-EccCCCCCCCHHHHH
Q 017197 98 -TEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAE-RLSTDHNVGVEEVRK 175 (375)
Q Consensus 98 -~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~-~LT~dH~~~~~~e~~ 175 (375)
+++.+...... . ....+|||++++++.+++||+|||||||+|+++.+ ... +||+||++.++.|+.
T Consensus 82 ~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~--------~~~~~Lt~dH~~~~~~E~~ 148 (254)
T PF00481_consen 82 FTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG--------GIIKQLTRDHKPSNPDERE 148 (254)
T ss_dssp HHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT--------EEEEESS---STTSHHHHH
T ss_pred cccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc--------ccccccccccccchhhccc
Confidence 77777663221 1 23468999999999999999999999999999999 666 999999999999999
Q ss_pred HHHhhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEE
Q 017197 176 EVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFL 255 (375)
Q Consensus 176 ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~L 255 (375)
||.+.+ +.+.. .+|+.|.|++||||||..+|... +++|+++|++..+.+.++|.||
T Consensus 149 RI~~~g----g~v~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~fl 204 (254)
T PF00481_consen 149 RIRKAG----GRVSE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFL 204 (254)
T ss_dssp HHHHTT-----GEEE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEE
T ss_pred eeeccc----ccccc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEE
Confidence 999985 33333 56999999999999999997532 4679999999999999999999
Q ss_pred EEeccCCccCCCHHHHHHHHHcC-C----cchHHHHHHHHHHHHH
Q 017197 256 IFASDGLWEQLTDEAAVEIVCKN-P----RAGIAKRLVRAALQEA 295 (375)
Q Consensus 256 vLaSDGlwd~l~~~ei~~iv~~~-~----~~~~a~~Lv~~A~~~~ 295 (375)
|||||||||+|+++|++++++.. . ++.+|+.|++.|+..+
T Consensus 205 vlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~g 249 (254)
T PF00481_consen 205 VLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARG 249 (254)
T ss_dssp EEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTT
T ss_pred EEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999999875 2 5778999999999844
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=299.59 Aligned_cols=220 Identities=30% Similarity=0.442 Sum_probs=186.7
Q ss_pred EEecC-CcccCCceeeecCCC---cEEEEEEcCCCchHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHH
Q 017197 37 AVVQA-NSCLEDQSQVFTSPS---ATYVGVYDGHGGPEASRFVNKHLFPYLHRL------------SAEVIKKAFHATEE 100 (375)
Q Consensus 37 ~~~~~-r~~~eD~~~~~~~~~---~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~------------~~~~l~~a~~~~~~ 100 (375)
...+. |..|||++.+....+ ..||+|||||||+++++++++.+++.|.+. ..+.+.+++..+++
T Consensus 14 s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~ 93 (262)
T COG0631 14 SDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANE 93 (262)
T ss_pred ccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Confidence 33344 889999998885433 469999999999999999999999999871 46778888888888
Q ss_pred HHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHh-
Q 017197 101 EFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEA- 179 (375)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~- 179 (375)
.|..... .......||||++++++.++++|+|||||||+|++|++ .+++||+||++.++.++.++..
T Consensus 94 ~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~--------~~~~lT~DH~~~~~~~~~~~~~~ 161 (262)
T COG0631 94 AIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG--------ELKQLTEDHSLVNRLEQRGIITP 161 (262)
T ss_pred HHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC--------ceEEeccCCcHHHHHHHhcCCCH
Confidence 8887644 33445679999999999999999999999999999999 8999999999999988876433
Q ss_pred ----hCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEE
Q 017197 180 ----LHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFL 255 (375)
Q Consensus 180 ----~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~L 255 (375)
.+|..+ ++|||||+... .+|++....++++| |+
T Consensus 162 ~~~~~~~~~~----------------~ltralG~~~~--------------------------~~p~~~~~~~~~~d-~l 198 (262)
T COG0631 162 EEARSHPRRN----------------ALTRALGDFDL--------------------------LEPDITELELEPGD-FL 198 (262)
T ss_pred HHHHhCccch----------------hhhhhcCCCcc--------------------------cceeEEEEEcCCCC-EE
Confidence 344433 69999999875 58899999999996 78
Q ss_pred EEeccCCccCCCHHHHHHHHHc-CCcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCC
Q 017197 256 IFASDGLWEQLTDEAAVEIVCK-NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 256 vLaSDGlwd~l~~~ei~~iv~~-~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~ 332 (375)
|||||||||.++++++.++++. ..++..+.+|++.|+. +++.||+|+++|.+....
T Consensus 199 lL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~---------------------~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 199 LLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALE---------------------GGGPDNITVVLVRLNGEG 255 (262)
T ss_pred EEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------cCCCCceEEEEEEeeccc
Confidence 8999999999999999999995 6788899999999988 346999999999998765
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=281.94 Aligned_cols=176 Identities=31% Similarity=0.465 Sum_probs=150.6
Q ss_pred ccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEeecCeeeec
Q 017197 119 VGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIK 198 (375)
Q Consensus 119 ~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~ 198 (375)
+|||++||++.+++|||||.|||||++.|.+ +..-|+.||+|..+.|..||..++ |.+... | ||+
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~G--------kAvdmS~DHKPEDevE~~RI~~AG----G~vtlD-G--RVN 394 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNG--------KAVDMSVDHKPEDEVETNRIHAAG----GQVTLD-G--RVN 394 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCC--------ceeecccCCCcccHHHHHHHHhcC----CeEeec-c--eec
Confidence 8999999999999999999999999999999 999999999999999999999884 444432 2 999
Q ss_pred CccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHHHHHHHHHcC
Q 017197 199 GIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKN 278 (375)
Q Consensus 199 g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~ei~~iv~~~ 278 (375)
|.|.++|||||+.||... -+|++.++|++-|+|....|.+.|+|+||++||||++|+.++++++++..
T Consensus 395 GGLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~ 462 (542)
T KOG0699|consen 395 GGLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDL 462 (542)
T ss_pred Cccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHH
Confidence 999999999999997643 48899999999999999999999999999999999999999999999864
Q ss_pred -----CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCCCCCC
Q 017197 279 -----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSS 336 (375)
Q Consensus 279 -----~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~~~~~ 336 (375)
....++.+|++.++.-... -.+...||||+|++.|+...+...
T Consensus 463 l~~n~~ls~iceeL~D~CLAp~T~---------------GDGTGCDNMT~ii~~Fkrk~~elq 510 (542)
T KOG0699|consen 463 LAKNSSLSEICEELCDACLAPSTD---------------GDGTGCDNMTVIITTFKRKSKELQ 510 (542)
T ss_pred HhcCchHHHHHHHHHHhhcCCCCC---------------CCCcCCCcceEEEEEeccchhhcC
Confidence 3345677777777653321 124568999999999997654443
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.3e-33 Score=261.90 Aligned_cols=229 Identities=41% Similarity=0.650 Sum_probs=186.5
Q ss_pred eeEEecC-CcccCCceeeecC--CCcEEEEEEcCCCchHHHHHHHHHHHHHHHHh----------hHHHHHHHHHHHHHH
Q 017197 35 SIAVVQA-NSCLEDQSQVFTS--PSATYVGVYDGHGGPEASRFVNKHLFPYLHRL----------SAEVIKKAFHATEEE 101 (375)
Q Consensus 35 ~~~~~~~-r~~~eD~~~~~~~--~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~----------~~~~l~~a~~~~~~~ 101 (375)
+....++ |..|||++++... .+..+|+|||||||..+|+++++.+.+.+.+. +.+.|.+++..++++
T Consensus 9 ~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (255)
T smart00332 9 GLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEE 88 (255)
T ss_pred EEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHH
Confidence 3344555 8999999988866 78899999999999999999999999998771 445577777777777
Q ss_pred HHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhC
Q 017197 102 FLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALH 181 (375)
Q Consensus 102 l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~ 181 (375)
+....... .....+|||++++++..+.+|++|+||||+|++|++ ++.++|+||++.++.+..++...+
T Consensus 89 ~~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~--------~~~~lt~dh~~~~~~~~~~i~~~~ 156 (255)
T smart00332 89 ILEELESL----EEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG--------KAVQLTEDHKPSNEDERARIEAAG 156 (255)
T ss_pred HHHhhhhc----cCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC--------ceeEcCCCCCCcCHHHHHHHHHcC
Confidence 76654422 233568999999999999999999999999999988 789999999999999888888764
Q ss_pred CCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEc-CCCCeEEEEecc
Q 017197 182 PDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKL-RPQDLFLIFASD 260 (375)
Q Consensus 182 p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l-~~~D~~LvLaSD 260 (375)
.. +. .++.++...+||++|+..+| |.++++|++....+ .++| +||||||
T Consensus 157 ~~----~~----~~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~SD 206 (255)
T smart00332 157 GF----VI----NGRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILASD 206 (255)
T ss_pred CE----EE----CCeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEECC
Confidence 31 11 12566667899999987663 56889999999996 7777 6668999
Q ss_pred CCccCCCHHHHHHHHHcC----CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEE
Q 017197 261 GLWEQLTDEAAVEIVCKN----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVI 326 (375)
Q Consensus 261 Glwd~l~~~ei~~iv~~~----~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv 326 (375)
|||++++++++.+++... +...++..|++.|.. ++..||+|+|||
T Consensus 207 Gv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~---------------------~~~~Dn~T~ivv 255 (255)
T smart00332 207 GLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALA---------------------RGSKDNITVIVV 255 (255)
T ss_pred ccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH---------------------cCCCCCeEEEEC
Confidence 999999999999999875 367788888888876 346899999985
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.7e-33 Score=260.65 Aligned_cols=231 Identities=39% Similarity=0.572 Sum_probs=185.5
Q ss_pred eeEEecC-CcccCCceeeecCC---CcEEEEEEcCCCchHHHHHHHHHHHHHHHHhh-----------HHHHHHHHHHHH
Q 017197 35 SIAVVQA-NSCLEDQSQVFTSP---SATYVGVYDGHGGPEASRFVNKHLFPYLHRLS-----------AEVIKKAFHATE 99 (375)
Q Consensus 35 ~~~~~~~-r~~~eD~~~~~~~~---~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~-----------~~~l~~a~~~~~ 99 (375)
.....++ |..|||++.+.... +..+|+|||||||+..++++++.+.+.+.+.. ...+.++|..++
T Consensus 4 ~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (254)
T cd00143 4 GVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRAD 83 (254)
T ss_pred eeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Confidence 3444555 88899999888655 78999999999999999999999998887721 244666677777
Q ss_pred HHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHh
Q 017197 100 EEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEA 179 (375)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~ 179 (375)
+.+...... ......+|||++++++.++.++++|+||||+|+++++ +++++|.||++.++.+..|+..
T Consensus 84 ~~l~~~~~~----~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~--------~~~~lt~dh~~~~~~~~~~i~~ 151 (254)
T cd00143 84 EEILEEAQD----EPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG--------EAVQLTKDHKPVNEEERERIEK 151 (254)
T ss_pred HHHHHhhhh----ccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC--------ceeEcCCCCCCcChHHHHHHHH
Confidence 666654432 1334568999999999999999999999999999999 8999999999999888888887
Q ss_pred hCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEc-CCCCeEEEEe
Q 017197 180 LHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKL-RPQDLFLIFA 258 (375)
Q Consensus 180 ~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l-~~~D~~LvLa 258 (375)
.++. .. ..+.++...+||+||+..+| +.+..+|++....+ +++| +|+||
T Consensus 152 ~~~~----~~----~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d-~ill~ 201 (254)
T cd00143 152 AGGR----VS----NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDD-FLILA 201 (254)
T ss_pred cCCc----EE----eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCc-EEEEE
Confidence 6532 11 12455666899999998663 44678999999999 7777 56689
Q ss_pred ccCCccCCCHHHHHHHHHcC----CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEc
Q 017197 259 SDGLWEQLTDEAAVEIVCKN----PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYL 328 (375)
Q Consensus 259 SDGlwd~l~~~ei~~iv~~~----~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l 328 (375)
|||||+++++++|.+++... +.+++|.+|++.|... ++.||+|+|++++
T Consensus 202 SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~---------------------~~~Dn~t~i~~~~ 254 (254)
T cd00143 202 SDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR---------------------GSHDNITVVVVRL 254 (254)
T ss_pred CCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC---------------------CCCCCEEEEEEeC
Confidence 99999999999999999875 3678899999988773 3589999999975
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.9e-33 Score=290.54 Aligned_cols=223 Identities=23% Similarity=0.329 Sum_probs=161.4
Q ss_pred CcccCCceeeecC------------CCcEEEEEEcCCCchHHHH----HHHHHHHHHHHH------hhHHHHHHHHHHHH
Q 017197 42 NSCLEDQSQVFTS------------PSATYVGVYDGHGGPEASR----FVNKHLFPYLHR------LSAEVIKKAFHATE 99 (375)
Q Consensus 42 r~~~eD~~~~~~~------------~~~~l~gV~DG~GG~~aa~----~a~~~l~~~l~~------~~~~~l~~a~~~~~ 99 (375)
|+.|||++.+... ....+|+|||||||+.+++ ++.+.+.+.|.+ ...+.++++|..++
T Consensus 387 R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ai~~AN 466 (645)
T PRK14559 387 RHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIREAIYLAN 466 (645)
T ss_pred CcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH
Confidence 8999999866421 1357999999999887555 445555544433 12456889999999
Q ss_pred HHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEee-eeCCCCCceeEEEEccCCCCCCCHHHHHHHH
Q 017197 100 EEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGR-RVSDDSKVKVAAERLSTDHNVGVEEVRKEVE 178 (375)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r-~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 178 (375)
+.|.+..... ......+||||++++++.++++|++||||||+|+++ ++ .+++||+||++.+++.+.++.
T Consensus 467 ~~I~~~~~~~--~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g--------~l~QLT~DHs~~~~lv~~Gi~ 536 (645)
T PRK14559 467 EAIYDLNQQN--ARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG--------GLEQLTVDHEVGQREIQRGVE 536 (645)
T ss_pred HHHHHHhhhc--ccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC--------eEEEeCCCCCHHHHHHHhCCC
Confidence 9888754432 122345699999999999999999999999999985 55 899999999998765544321
Q ss_pred hhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEe
Q 017197 179 ALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFA 258 (375)
Q Consensus 179 ~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLa 258 (375)
.. .. +..++..++|||||+...+. .+|++..+.++++| ++|||
T Consensus 537 ~~-----------~a-~~~p~~~~LTrALG~~~~~~------------------------l~Pdi~~~~L~~gD-~lLLC 579 (645)
T PRK14559 537 PQ-----------IA-YARPDAYQLTQALGPRDNSA------------------------IQPDIQFLEIEEDT-LLLLC 579 (645)
T ss_pred HH-----------HH-hcCcccceeeeccCCCCCCc------------------------ccceEEEEEcCCCC-EEEEE
Confidence 00 00 01122347999999865421 47899999999887 56679
Q ss_pred ccCCccC--CCH---HHHHHHHHcC-CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCC
Q 017197 259 SDGLWEQ--LTD---EAAVEIVCKN-PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 259 SDGlwd~--l~~---~ei~~iv~~~-~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~ 332 (375)
||||||+ +.. +++..++... +.++++.+|++.|+. ++++||||+|||++....
T Consensus 580 SDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~---------------------~gg~DNITvIvV~l~~~p 638 (645)
T PRK14559 580 SDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQ---------------------YNGHDNITAILVRLKVRP 638 (645)
T ss_pred CCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------------------cCCCCcEEEEEEEeccCC
Confidence 9999994 554 3455566544 566789999999987 446999999999997655
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-26 Score=214.51 Aligned_cols=238 Identities=31% Similarity=0.424 Sum_probs=175.9
Q ss_pred CCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH----------------------------------------------hh
Q 017197 54 SPSATYVGVYDGHGGPEASRFVNKHLFPYLHR----------------------------------------------LS 87 (375)
Q Consensus 54 ~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~----------------------------------------------~~ 87 (375)
..++++|.+||||.|..+|-.+++.+.+.+.. ..
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 45789999999999999888888888777654 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCC
Q 017197 88 AEVIKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHN 167 (375)
Q Consensus 88 ~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~ 167 (375)
..+|+.||+.+++.|.+.... ....+|||+++++..-++||++|.||||++++|++ +++.|+++.+
T Consensus 221 iGAlEsAFqemDeqiarer~~------~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd--------eirplS~efT 286 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQV------WRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND--------EIRPLSKEFT 286 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHh------hcCCCCceEEEeeeeccceEEccCCCceEEEEecC--------CeeecccccC
Confidence 457888999999988875432 12357999999998999999999999999999999 8999999999
Q ss_pred CCCHHHHHHHHhh---CCC-------------C------CceEEe------------------------ecC-eeeecCc
Q 017197 168 VGVEEVRKEVEAL---HPD-------------D------SHIVVY------------------------ARG-VWRIKGI 200 (375)
Q Consensus 168 ~~~~~e~~ri~~~---~p~-------------~------~~~~~~------------------------~~g-~~r~~g~ 200 (375)
|..+ |+|++.. .|+ + +.-+.+ ..| +.|+.++
T Consensus 287 PetE--RqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~T 364 (493)
T KOG1323|consen 287 PETE--RQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLAT 364 (493)
T ss_pred cHHH--HHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhh
Confidence 8754 4444332 111 0 111111 111 2377889
Q ss_pred cccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCC----CCeEEEEeccCCccCCCHHHHHHHHH
Q 017197 201 IQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRP----QDLFLIFASDGLWEQLTDEAAVEIVC 276 (375)
Q Consensus 201 l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~----~D~~LvLaSDGlwd~l~~~ei~~iv~ 276 (375)
+.+||.|||.++|..+.. =..+|++++.|+++.++|.. .|++|||+|||+||+++++|+..+++
T Consensus 365 igVsRGlGDH~Lkv~dsn------------l~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vr 432 (493)
T KOG1323|consen 365 IGVSRGLGDHHLKVVDSN------------LSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVR 432 (493)
T ss_pred heeccccCcceeeeecCC------------cccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHH
Confidence 999999999999876531 12489999999999998873 35588899999999999999999998
Q ss_pred cC----Cc------chHHHHHHHHHHHHHHHhhhhhhHHHHhhhccC-----CCCCCCCeEEEEEEcCCCC
Q 017197 277 KN----PR------AGIAKRLVRAALQEAARKREVGYKEIKKLKRGI-----RRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 277 ~~----~~------~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~-----~~~~~DNiTvIvv~l~~~~ 332 (375)
.. .+ ..+|+.|+..|..... +++| +-++.|||||.||.|.+..
T Consensus 433 s~L~~~dp~Dp~RYt~aaqdlva~arg~~k-------------~rgWr~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 433 SFLPSTDPADPSRYTQAAQDLVAAARGQQK-------------DRGWRMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred HhcCCCCCCChhHHHHHHHHHHHHhcCccC-------------CCceeccCCCcCCCCceEEEEEeccCCC
Confidence 74 11 1256666665543221 1222 2467899999999998765
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-23 Score=194.51 Aligned_cols=217 Identities=21% Similarity=0.210 Sum_probs=145.7
Q ss_pred CcccCCceeeecCCCcEEEEEEcCCCchH-----HHHHHH---HHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHH
Q 017197 42 NSCLEDQSQVFTSPSATYVGVYDGHGGPE-----ASRFVN---KHLFPYLHR------LSAEVIKKAFHATEEEFLRLVK 107 (375)
Q Consensus 42 r~~~eD~~~~~~~~~~~l~gV~DG~GG~~-----aa~~a~---~~l~~~l~~------~~~~~l~~a~~~~~~~l~~~~~ 107 (375)
-+..||+|++..+....++|||||+|||. .+.|.. +...+.+.+ .+...|..++..+-.
T Consensus 88 ~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~------- 160 (330)
T KOG1379|consen 88 GKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS------- 160 (330)
T ss_pred CCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh-------
Confidence 35779999999999999999999999983 455533 333333333 455556666555531
Q ss_pred HhCCCCCCcccccceEEEEEEe--CCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCC--CHHHHHHHHhhCCC
Q 017197 108 RVLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVG--VEEVRKEVEALHPD 183 (375)
Q Consensus 108 ~~~~~~~~~~~~GtT~~v~~i~--~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~--~~~e~~ri~~~~p~ 183 (375)
.+....++|||+++++. +++||+||+|||...++|++ ++..-|..+... -+.. ....|.
T Consensus 161 -----~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G--------~vv~~S~~Q~H~FN~PyQ----Ls~~p~ 223 (330)
T KOG1379|consen 161 -----QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG--------KVVFRSPEQQHYFNTPYQ----LSSPPE 223 (330)
T ss_pred -----cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC--------EEEEcCchheeccCCcee----eccCCc
Confidence 12223467788888887 89999999999999999999 788877765533 1110 000000
Q ss_pred CCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCc
Q 017197 184 DSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLW 263 (375)
Q Consensus 184 ~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlw 263 (375)
+ ....++|.. ...+...+.+++|| +|||||||||
T Consensus 224 -~-----------------~~~~~~d~p---------------------------~~ad~~~~~v~~GD-vIilATDGlf 257 (330)
T KOG1379|consen 224 -G-----------------YSSYISDVP---------------------------DSADVTSFDVQKGD-VIILATDGLF 257 (330)
T ss_pred -c-----------------ccccccCCc---------------------------cccceEEEeccCCC-EEEEeccccc
Confidence 0 011122211 23368889999999 5668999999
Q ss_pred cCCCHHHHHHHHHcC------CcchHHHHHHHHHHHHHHHh-hhhhhHHHH-hhhccCCCCCCCCeEEEEEEc
Q 017197 264 EQLTDEAAVEIVCKN------PRAGIAKRLVRAALQEAARK-REVGYKEIK-KLKRGIRRHFHDDITVIVIYL 328 (375)
Q Consensus 264 d~l~~~ei~~iv~~~------~~~~~a~~Lv~~A~~~~~~~-~~~~~~~~~-~~~~~~~~~~~DNiTvIvv~l 328 (375)
|+|.+++|.+++... ..+..|..++..|...+-.. .+.+|+... +....-++|+.||||+||..+
T Consensus 258 DNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 258 DNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred ccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 999999999999864 34678899999988776433 333444332 222334577899999999764
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.79 E-value=1.4e-18 Score=180.67 Aligned_cols=232 Identities=22% Similarity=0.321 Sum_probs=182.9
Q ss_pred eeeEEecCCcccCCceeee----cCCCcEEEEEEcCCCchHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHH
Q 017197 34 YSIAVVQANSCLEDQSQVF----TSPSATYVGVYDGHGGPEASRFVNKHLFPYLHR------LSAEVIKKAFHATEEEFL 103 (375)
Q Consensus 34 ~~~~~~~~r~~~eD~~~~~----~~~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~------~~~~~l~~a~~~~~~~l~ 103 (375)
|+++...|++...-.-.+. .....+.||.+||-+-....+++...+..++.+ +..+.|.++|...++++.
T Consensus 524 ~Gv~~~~gqrnk~c~~~~~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg 603 (1081)
T KOG0618|consen 524 YGVAGVSGQRNKVCSRAVWVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLG 603 (1081)
T ss_pred eccchhcccccchhhhhhhhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhh
Confidence 6666655633322221111 446779999999999999999999999998887 345569999999999886
Q ss_pred HHHHHhCCCCCCcccccceEEEEEEeC--------CEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCC-CCCHHHH
Q 017197 104 RLVKRVLPVRPQIASVGSCCLVGAISN--------DVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHN-VGVEEVR 174 (375)
Q Consensus 104 ~~~~~~~~~~~~~~~~GtT~~v~~i~~--------~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~-~~~~~e~ 174 (375)
.... .-|..++.+.+.. .++++||+|+|.+++++++ ...++|+-.. ..+++|.
T Consensus 604 ~~g~----------~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng--------~~~p~t~~~~~~v~~eE~ 665 (1081)
T KOG0618|consen 604 EEGQ----------VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNG--------KPLPTTRSPMLEVDREEY 665 (1081)
T ss_pred hhhc----------cccchhhheeecccccCcccchhhhHhhhccchhhhhhcC--------CcCcccccccccCCHHHH
Confidence 5433 2355555555542 4789999999999999999 5666666654 4489999
Q ss_pred HHHHhhCCCCCceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeE
Q 017197 175 KEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLF 254 (375)
Q Consensus 175 ~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~ 254 (375)
+||...+ +++. .+ .+++|+...||++|-+.. .|.|.+.|+|....|.+.|+|
T Consensus 666 ~RI~~~~----g~i~-ed--~k~ngvt~~tR~iG~~~l---------------------~P~v~p~Phv~~~~Lt~qdE~ 717 (1081)
T KOG0618|consen 666 KRIVDSK----GFIT-ED--NKLNGVTSSTRAIGPFSL---------------------FPHVLPDPHVSVVILTEQDEF 717 (1081)
T ss_pred HHHHHhc----Ceec-CC--Ceeeceeeeeeecccccc---------------------cccccCCCceeeEecccCceE
Confidence 9999874 3333 22 388999999999998766 578999999999999999999
Q ss_pred EEEeccCCccCCCHHHHHHHHHcC-CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcCCCC
Q 017197 255 LIFASDGLWEQLTDEAAVEIVCKN-PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 332 (375)
Q Consensus 255 LvLaSDGlwd~l~~~ei~~iv~~~-~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~~~~ 332 (375)
||+|+-++|++|+.+++++.++.. ++-.+|++|++.|..+++ .||++|+||++....
T Consensus 718 LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~AqSYgc---------------------~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 718 LIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDLAQSYGC---------------------AENVSVLVVRLNHLE 775 (1081)
T ss_pred EEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHHHHhccc---------------------ccCeeEEEEEeecch
Confidence 999999999999999999999976 455689999999999774 899999999998755
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.75 E-value=2e-17 Score=150.66 Aligned_cols=174 Identities=22% Similarity=0.321 Sum_probs=97.6
Q ss_pred ecCCcccCCceeeecCCCcEEEEEEcCCCchH----HHHHHHHHHHHHHHH---hhHHH-HHHHHHHHHHHHHHHH----
Q 017197 39 VQANSCLEDQSQVFTSPSATYVGVYDGHGGPE----ASRFVNKHLFPYLHR---LSAEV-IKKAFHATEEEFLRLV---- 106 (375)
Q Consensus 39 ~~~r~~~eD~~~~~~~~~~~l~gV~DG~GG~~----aa~~a~~~l~~~l~~---~~~~~-l~~a~~~~~~~l~~~~---- 106 (375)
.+.+..|||++.+....++.+++||||+||.. +|+++.+.+.+.+.+ ..... ....+..+.+++....
T Consensus 6 ~~~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (212)
T PF13672_consen 6 RGRGAPNQDAFGIRTDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIVRAFQ 85 (212)
T ss_dssp -TTSSS--EEEEEE-TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred cCCCCCCCCCEEeeeCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 45589999999988888888999999999664 555566666666655 11111 3334444444444321
Q ss_pred -HHhCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEe-eeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCC
Q 017197 107 -KRVLPVRPQIASVGSCCLVGAISNDVLYVANLGDSRAVLG-RRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDD 184 (375)
Q Consensus 107 -~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~-r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~ 184 (375)
... .......++||++++++.++.++++|+||||+|++ +++ .+..++.+|+... . .
T Consensus 86 ~~~~--~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g--------~~~~l~~~~~~~~----~---~----- 143 (212)
T PF13672_consen 86 SAKQ--ADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG--------EIQQLTDDHSGEY----P---N----- 143 (212)
T ss_dssp HHHH--HSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT--------EEEE-S---BHHH----H---H-----
T ss_pred hhhh--ccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC--------EEEEcCCCccchh----h---h-----
Confidence 000 12234567999999999999999999999999765 555 8899999996111 0 0
Q ss_pred CceEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCcc
Q 017197 185 SHIVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE 264 (375)
Q Consensus 185 ~~~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd 264 (375)
.++.+..... ....++..+.+.++|.|| |||||||+
T Consensus 144 ------------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~d~il-L~SDG~~~ 179 (212)
T PF13672_consen 144 ------------------QTRSLTGDDP-------------------------EPDVQYGSIPLEEGDVIL-LCSDGVWD 179 (212)
T ss_dssp ------------------CTTSCCHHCC-------------------------CTETEEEEEE--TT-EEE-EE-HHHHT
T ss_pred ------------------hhhccCcccc-------------------------ccCCeEEEEEcCCCCEEE-EECcCccc
Confidence 1222222111 012256667788899665 69999999
Q ss_pred CCCHHH-HHHHHHcC
Q 017197 265 QLTDEA-AVEIVCKN 278 (375)
Q Consensus 265 ~l~~~e-i~~iv~~~ 278 (375)
.+...+ +..++...
T Consensus 180 ~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 180 NLRSYEDLEQFLKDL 194 (212)
T ss_dssp TS-HHHHHHHH----
T ss_pred cCCCHHHHHHHhhhc
Confidence 998655 66666553
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.73 E-value=3.7e-16 Score=140.22 Aligned_cols=176 Identities=20% Similarity=0.152 Sum_probs=124.4
Q ss_pred eeEEecCCcccCCceeeecCCC-cEEEEEEcCCCchHHHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHhCC
Q 017197 35 SIAVVQANSCLEDQSQVFTSPS-ATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAE--VIKKAFHATEEEFLRLVKRVLP 111 (375)
Q Consensus 35 ~~~~~~~r~~~eD~~~~~~~~~-~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~--~l~~a~~~~~~~l~~~~~~~~~ 111 (375)
+.....+.....|.|.+...++ ..+++|+||||+...|.+++..+...|.+.... .+.+.+..+++.+...
T Consensus 7 ~~~~~p~~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~~~------ 80 (193)
T smart00331 7 AQYYEDATQVGGDFYDVVKLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIYEN------ 80 (193)
T ss_pred EEEEcchHhcCccEEEEEEeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc------
Confidence 3344455778889998886554 789999999998888888888888888763332 4666677777666543
Q ss_pred CCCCcccccceEEEEEE--eCCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEE
Q 017197 112 VRPQIASVGSCCLVGAI--SNDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVV 189 (375)
Q Consensus 112 ~~~~~~~~GtT~~v~~i--~~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~ 189 (375)
....+++|++++++ ..++++++|+||+++|+++.++ ...+.+.+
T Consensus 81 ---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~-------~~~~~~~~------------------------ 126 (193)
T smart00331 81 ---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADG-------GLVEDLDD------------------------ 126 (193)
T ss_pred ---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCC-------CeEEEcCC------------------------
Confidence 12347999999888 5889999999999999999431 23333332
Q ss_pred eecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHH
Q 017197 190 YARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDE 269 (375)
Q Consensus 190 ~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~ 269 (375)
.++.+|.... .+++...+.++++|.++ |+|||||+.+..+
T Consensus 127 -------------~~~~lG~~~~--------------------------~~~~~~~~~l~~gd~l~-l~TDGl~e~~~~~ 166 (193)
T smart00331 127 -------------LGAPLGLEPD--------------------------VEVDVRELTLEPGDLLL-LYTDGLTEARNPE 166 (193)
T ss_pred -------------CCceeeeCCC--------------------------CcceeEEEeeCCCCEEE-EECCCccccCChH
Confidence 2334444221 23467788999999555 6999999999999
Q ss_pred HHHHHHHcCC---cchHHHHHHHH
Q 017197 270 AAVEIVCKNP---RAGIAKRLVRA 290 (375)
Q Consensus 270 ei~~iv~~~~---~~~~a~~Lv~~ 290 (375)
++.+++.+.. .++.+.++++.
T Consensus 167 ~l~~~l~~~~~~~~~~~~~~i~~~ 190 (193)
T smart00331 167 RLEELLEELLGSPPAEIAQRILEE 190 (193)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999998752 34445555544
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.55 E-value=1.4e-13 Score=147.10 Aligned_cols=192 Identities=18% Similarity=0.170 Sum_probs=129.3
Q ss_pred EEecCCcccCCceeeecC-CCcEEEEEEcCCCchHHHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHhCCCC
Q 017197 37 AVVQANSCLEDQSQVFTS-PSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAE--VIKKAFHATEEEFLRLVKRVLPVR 113 (375)
Q Consensus 37 ~~~~~r~~~eD~~~~~~~-~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~--~l~~a~~~~~~~l~~~~~~~~~~~ 113 (375)
..+.++..+.|.|.+... ++..+++|+||+|....|...+..+.+.+.+.... ....++..++..+...
T Consensus 559 ~~k~g~~vsGD~y~~~~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~~~ai~~lN~~L~~~-------- 630 (764)
T TIGR02865 559 AAKDGELVSGDSYSFGKLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDREVAIKTVNSILSLR-------- 630 (764)
T ss_pred hcCCCCcccCceEEEEEECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--------
Confidence 344457899999988864 44578899999995555555666666666541111 1344555555544321
Q ss_pred CCcccccceEEEEEEe--CCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEee
Q 017197 114 PQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYA 191 (375)
Q Consensus 114 ~~~~~~GtT~~v~~i~--~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~ 191 (375)
....+.+|+.+++++ .+++.++|+|+++.|+.|++ .+..++..+-|
T Consensus 631 -~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~--------~v~~i~s~~lP----------------------- 678 (764)
T TIGR02865 631 -STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA--------KVEVIRSSNLP----------------------- 678 (764)
T ss_pred -CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC--------EEEEecCCCce-----------------------
Confidence 112357899888886 78999999999999999887 77777543221
Q ss_pred cCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHHH-
Q 017197 192 RGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEA- 270 (375)
Q Consensus 192 ~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~e- 270 (375)
+|-... .+++....++.+|| +|+++|||++|..++.+
T Consensus 679 ---------------lGil~~--------------------------~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~ 716 (764)
T TIGR02865 679 ---------------IGILDE--------------------------VDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEG 716 (764)
T ss_pred ---------------eEeccC--------------------------CccceEEEEeCCCC-EEEEECCCCCcCCccccc
Confidence 111000 24467778999999 55579999999887533
Q ss_pred ----HHHHHHc---CCcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEc
Q 017197 271 ----AVEIVCK---NPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYL 328 (375)
Q Consensus 271 ----i~~iv~~---~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l 328 (375)
+.+++.. .++++.+..|+++++.... ....||+|++++++
T Consensus 717 ~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~------------------~~~~DD~Tvlvirv 763 (764)
T TIGR02865 717 KVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS------------------GKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC------------------CCCCCCeEEEEEEe
Confidence 6677764 2566778888888766432 12489999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.35 E-value=9.4e-11 Score=104.81 Aligned_cols=178 Identities=22% Similarity=0.254 Sum_probs=107.8
Q ss_pred CCcEEEEEEcCCCchHHHHHHHHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHhCCCCCCcccccceEEEEEEe--C
Q 017197 55 PSATYVGVYDGHGGPEASRFVNKHLFPYLHRLSAEV--IKKAFHATEEEFLRLVKRVLPVRPQIASVGSCCLVGAIS--N 130 (375)
Q Consensus 55 ~~~~l~gV~DG~GG~~aa~~a~~~l~~~l~~~~~~~--l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~--~ 130 (375)
++..++.|+|+.|....|.+.+..+...+....... ..+.+..+++.+...... . ...+|++++.++ .
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~----~----~~~~t~~~~~~d~~~ 73 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLDPEELLEALNRRLYRDLKG----D----NRYATACYAIIDPET 73 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHTTT----T----STTEEEEEEEEETTT
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhh----c----cccceEEEEEecccc
Confidence 457889999999955555555666666665522222 556666676666443321 1 256788877775 7
Q ss_pred CEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCceEEeecCeeeecCccccccccCcc
Q 017197 131 DVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDV 210 (375)
Q Consensus 131 ~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~vtRalGd~ 210 (375)
+.++++|+|++.++++++++ + ....+..... .+|..
T Consensus 74 ~~l~~~~aG~~~~l~~~~~~--~----~~~~~~~~~~--------------------------------------~lG~~ 109 (193)
T PF07228_consen 74 GTLTYANAGHPPPLLLRPGG--R----EIEQLESEGP--------------------------------------PLGIF 109 (193)
T ss_dssp TEEEEEEESSSEEEEEETTC--T----EEEEETCSSB--------------------------------------BCSSS
T ss_pred eEEEEeCCCCCCEEEEeccc--c----ceeecccCcc--------------------------------------ceeee
Confidence 78999999999999999951 1 3333322111 13321
Q ss_pred cccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCccCCCHH-------HHHHHHHcC---Cc
Q 017197 211 YLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDE-------AAVEIVCKN---PR 280 (375)
Q Consensus 211 ~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd~l~~~-------ei~~iv~~~---~~ 280 (375)
.. .+.....+.+.+||. |+|+||||++....+ .+.+++.+. +.
T Consensus 110 ~~--------------------------~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (193)
T PF07228_consen 110 ED--------------------------IDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSP 162 (193)
T ss_dssp CT--------------------------TCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-H
T ss_pred cc--------------------------ccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCCCH
Confidence 11 123466789999995 557999999998533 345666643 34
Q ss_pred chHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcC
Q 017197 281 AGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 329 (375)
Q Consensus 281 ~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~ 329 (375)
++.+..|++.+...+ .....||+|++++++.
T Consensus 163 ~~~~~~l~~~~~~~~------------------~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 163 QEIIDALLEAIDRFG------------------KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHHHHHT------------------TSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHHHHhc------------------CCCCCCceEEEEEEEC
Confidence 445555555554411 1335899999999863
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.45 E-value=1.6e-05 Score=78.68 Aligned_cols=199 Identities=18% Similarity=0.169 Sum_probs=120.4
Q ss_pred eeeEEecCCcccCCceeeecCC-CcEEEEEEcCCC-chHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHH
Q 017197 34 YSIAVVQANSCLEDQSQVFTSP-SATYVGVYDGHG-GPEASRFVNKHLFPYLHRLSA---EVIKKAFHATEEEFLRLVKR 108 (375)
Q Consensus 34 ~~~~~~~~r~~~eD~~~~~~~~-~~~l~gV~DG~G-G~~aa~~a~~~l~~~l~~~~~---~~l~~a~~~~~~~l~~~~~~ 108 (375)
........+...-|.|.+.... +...++|.|..| |-.+|-. .......+..... ....+.+..+++-+.....
T Consensus 151 i~~~~~~a~~vGGD~yd~~~~~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~l~~~n~~~~~~~~- 228 (367)
T COG2208 151 IEAILVPASEVGGDYYDFIQLGEKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADVLETLNRVLKQNLE- 228 (367)
T ss_pred ceeeEeEHHHcCCceEEEEEECCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHHHHHHHHHHHhccc-
Confidence 4444445555778998777544 689999999999 7766655 3333333333111 1223344444443333211
Q ss_pred hCCCCCCcccccceEEEEEEe--CCEEEEEEcCCceeEEeeeeCCCCCceeEEEEccCCCCCCCHHHHHHHHhhCCCCCc
Q 017197 109 VLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSH 186 (375)
Q Consensus 109 ~~~~~~~~~~~GtT~~v~~i~--~~~l~vanvGDSr~~l~r~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~ 186 (375)
..+-+|...++++ .+.+..+|+|---.++.+.+... .+..++
T Consensus 229 --------~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~-----~~~~l~----------------------- 272 (367)
T COG2208 229 --------EDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI-----EVEDLT----------------------- 272 (367)
T ss_pred --------CCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc-----eeEEcc-----------------------
Confidence 1156677777775 88999999999999998887210 011111
Q ss_pred eEEeecCeeeecCccccccccCcccccCCCCCCCccccccCCCCCCCCCcEeeccceEEEEcCCCCeEEEEeccCCcc--
Q 017197 187 IVVYARGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWE-- 264 (375)
Q Consensus 187 ~~~~~~g~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd-- 264 (375)
.....+|.... ..+.+....+++|| .|+|.|||+.+
T Consensus 273 ---------------~~g~piG~~~~--------------------------~~~~~~~~~l~~gd-~lvl~tDGv~Ea~ 310 (367)
T COG2208 273 ---------------ALGLPIGLLPD--------------------------YQYEVASLQLEPGD-LLVLYTDGVTEAR 310 (367)
T ss_pred ---------------CCCceeeecCC--------------------------ccchheeEEecCCC-EEEEEcCCeeeee
Confidence 23444554322 23457778899988 56679999999
Q ss_pred -----CCCHHHHHHHHHcC---CcchHHHHHHHHHHHHHHHhhhhhhHHHHhhhccCCCCCCCCeEEEEEEcC
Q 017197 265 -----QLTDEAAVEIVCKN---PRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 329 (375)
Q Consensus 265 -----~l~~~ei~~iv~~~---~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~DNiTvIvv~l~ 329 (375)
.+..+....++... ++++++..+.+......+. ....||+|++++++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~-----------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 311 NSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGD-----------------QIQDDDITLLVLKVK 366 (367)
T ss_pred cCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCC-----------------ccccCceEEEEEEec
Confidence 45566677777642 4455555555554443321 223788999999875
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=69.16 E-value=96 Score=29.60 Aligned_cols=98 Identities=11% Similarity=-0.035 Sum_probs=55.1
Q ss_pred ecCCcccCCceeeec-CCCcEEEEEEc--CCCch--HHHHHHHHHHHHHHHHhh-H-----HHHHHHHHHHHHHHHHHHH
Q 017197 39 VQANSCLEDQSQVFT-SPSATYVGVYD--GHGGP--EASRFVNKHLFPYLHRLS-A-----EVIKKAFHATEEEFLRLVK 107 (375)
Q Consensus 39 ~~~r~~~eD~~~~~~-~~~~~l~gV~D--G~GG~--~aa~~a~~~l~~~l~~~~-~-----~~l~~a~~~~~~~l~~~~~ 107 (375)
.......-|.|.++. +++...|-++| ||||+ .+|-.+...+...+.... . ....+.+..+++.+.+..
T Consensus 144 ~~~~~~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~- 222 (303)
T PRK10693 144 LVAADKPGLVLDIAALSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQAN- 222 (303)
T ss_pred ccCCCCCccEEeeeecCCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcC-
Confidence 334566778887664 55566666777 66644 444443333433443311 0 023445555555444321
Q ss_pred HhCCCCCCcccccceEEEEEEe--CCEEEEEEcCCceeEEe
Q 017197 108 RVLPVRPQIASVGSCCLVGAIS--NDVLYVANLGDSRAVLG 146 (375)
Q Consensus 108 ~~~~~~~~~~~~GtT~~v~~i~--~~~l~vanvGDSr~~l~ 146 (375)
. . .--|++.++++ .++|.++|.|-...++.
T Consensus 223 ------~--~-~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~ 254 (303)
T PRK10693 223 ------L--P-GQFPLLVGYYHRELKNLILVSAGLNATLNT 254 (303)
T ss_pred ------C--C-ceeeEEEEEEEcCCCeEEEEeCCCCCEEec
Confidence 1 0 12477777775 67899999999998853
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=36.25 E-value=21 Score=26.74 Aligned_cols=19 Identities=32% Similarity=0.660 Sum_probs=14.2
Q ss_pred cC-CCCeEEEEeccCCccCCC
Q 017197 248 LR-PQDLFLIFASDGLWEQLT 267 (375)
Q Consensus 248 l~-~~D~~LvLaSDGlwd~l~ 267 (375)
++ +|.+||+ ++||+|=.+.
T Consensus 23 l~~~G~Rllv-a~nGv~lEv~ 42 (72)
T PF09436_consen 23 LERPGHRLLV-ASNGVFLEVR 42 (72)
T ss_pred cccCCcEEEE-ecCcEEEEEe
Confidence 44 6777775 9999996554
No 22
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=24.73 E-value=1.6e+02 Score=17.28 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=16.4
Q ss_pred EEEeCCEEEEEEcCCceeEEe
Q 017197 126 GAISNDVLYVANLGDSRAVLG 146 (375)
Q Consensus 126 ~~i~~~~l~vanvGDSr~~l~ 146 (375)
++-.++.+||+-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 344789999999999887653
No 23
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=23.96 E-value=65 Score=25.53 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=27.4
Q ss_pred EEcCCCCeEEEEeccCCccCCCHHHHHHHHHcCC
Q 017197 246 RKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNP 279 (375)
Q Consensus 246 ~~l~~~D~~LvLaSDGlwd~l~~~ei~~iv~~~~ 279 (375)
.-+.++|.++ |+.|||+-.+...+..+-++..+
T Consensus 20 ~~l~~~D~vl-L~qdGV~aAl~~~~~~~sl~~~p 52 (96)
T COG2168 20 RLLTEGDAVL-LLQDGVYAALKGNRYLASLRESP 52 (96)
T ss_pred HHhcccCeEE-EEcccchhhhcCcHHHHHHhcCc
Confidence 4467899777 69999999999988888887765
No 24
>PF06319 DUF1052: Protein of unknown function (DUF1052); InterPro: IPR009394 This entry is represented by Ralstonia phage RSL1, Orf212. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several bacterial proteins of unknown function.; PDB: 3DNX_A.
Probab=21.37 E-value=60 Score=28.08 Aligned_cols=33 Identities=27% Similarity=0.227 Sum_probs=19.2
Q ss_pred ceeeccCCCCCcCceeeEEecCCcccCCceeee--------cCCCcEEEEEEcCCCch
Q 017197 20 LMWHSDLKPHASGDYSIAVVQANSCLEDQSQVF--------TSPSATYVGVYDGHGGP 69 (375)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~r~~~eD~~~~~--------~~~~~~l~gV~DG~GG~ 69 (375)
-+|++++..| |++++. .-++.+=+.|+||+|+.
T Consensus 78 ~KW~dY~~~C-----------------DRfyfAv~~~~p~e~lP~~~GLIvaD~~gae 118 (157)
T PF06319_consen 78 RKWPDYLDWC-----------------DRFYFAVPPDFPQELLPDETGLIVADGYGAE 118 (157)
T ss_dssp TTGGGGGGG------------------SEEEEEE-TTS-GGGS-TTSEEEEE-SS-EE
T ss_pred CcchHHHHhh-----------------ceeEEecCCCCChhhCCCCccEEEEecCCce
Confidence 4899999888 544333 22455567789999966
No 25
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=21.09 E-value=3.1e+02 Score=22.50 Aligned_cols=44 Identities=11% Similarity=0.179 Sum_probs=33.4
Q ss_pred CcEeeccceEEEEcCCCCeEEEEeccCCcc-------CCCHHHHHHHHHcC
Q 017197 235 PAMTAEPSILIRKLRPQDLFLIFASDGLWE-------QLTDEAAVEIVCKN 278 (375)
Q Consensus 235 ~~v~~~P~i~~~~l~~~D~~LvLaSDGlwd-------~l~~~ei~~iv~~~ 278 (375)
-+|+.+|+++.......+.|.|++..-.-+ .+++++|.-+..+.
T Consensus 37 ~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~ 87 (115)
T PRK06369 37 EIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQT 87 (115)
T ss_pred EEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHH
Confidence 458999999999988888899988877654 46667766665553
Done!