BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017198
         (375 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/374 (86%), Positives = 347/374 (92%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTGRYHTLLISNSSV+SCGSSLCGVLGHGPETTQCVSF+RI FPS A VVQVSAS N
Sbjct: 114 MQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA++L+SG+VFTCGDNSSFCCGH+DT+RPIFRPR VEALKGVPCKQV AGLNFT FLT 
Sbjct: 174 HAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            GHV++CG+NTHGQLGHGDTLDRPTPK I   E +GSV QIAAGPSY+LAVT +GVVYSF
Sbjct: 234 TGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQH+E  PRAIQTFRRK +HVVRVSAGDEHVVALDSSG+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKTLPEPL+SLKSHLAVQVCARKRKTFVLVD G V+GFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKV+RPRILDSLRAH VSQISTGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEP
Sbjct: 414 VSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEP 473

Query: 361 TEIFIQEMEEDTGL 374
           TEIF+QE   DTG+
Sbjct: 474 TEIFLQEFGHDTGI 487


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/373 (83%), Positives = 342/373 (91%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTGRYHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS N
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV+QSG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT+
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RP ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  P
Sbjct: 414 ASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVP 473

Query: 361 TEIFIQEMEEDTG 373
           TEIF+QE  +D G
Sbjct: 474 TEIFVQEATDDAG 486


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/365 (85%), Positives = 338/365 (92%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+TTGRYHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+V+QVSAS N
Sbjct: 114 MQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFVLQSG+VFTCGDNSSFCCGH DTNRPIFRPRLVEALKGVPCKQV  GLNFT FLT 
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +G ++TCG+NTHGQLGHGDT DRPTPK I  LE VGSVVQIAAGPSY+LAVT NGVVYSF
Sbjct: 234 QGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSN CLGHGEQHDE +PRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCG
Sbjct: 294 GSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKTLP  ++ LKSHLAVQVCARKRKTFVLVD GSVYGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +SDKV+RPR+LDSLRA HVSQISTGLYHTVVVT++G++FGFGDNERAQLGHDTLRGCL+P
Sbjct: 414 LSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQP 473

Query: 361 TEIFI 365
           TEIF+
Sbjct: 474 TEIFV 478


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/375 (83%), Positives = 341/375 (90%), Gaps = 4/375 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTGRYHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS N
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV+QSG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT+
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RP ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  P
Sbjct: 414 ASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVP 473

Query: 361 TEIF----IQEMEED 371
           TEIF    + EME D
Sbjct: 474 TEIFASPTVAEMERD 488


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/374 (82%), Positives = 339/374 (90%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+TTGRYHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+VVQVSAS N
Sbjct: 114 MQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFVLQSG+VFTCGDNSSFCCGH+DTNRPIFRPRLVEALK V CKQV+ GLNFT FLT 
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +G ++TCGSNTHGQLGHGDTLDRPTPK I  LE +G VVQIAAGPSY+LAVT NGVVYSF
Sbjct: 234 QGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G GSNFCLGHGEQHDE QPRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCG
Sbjct: 294 GYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKTLP  ++ LKS LAVQ CARKRKTFVLVD GSVYGFG MGFGSLGFPDR 
Sbjct: 354 ALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRD 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +++KV+ PR+LDSLRAH VSQISTGLYHTVVVT++G++FGFGDNER QLGHDTLRGCL+P
Sbjct: 414 ITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQP 473

Query: 361 TEIFIQEMEEDTGL 374
           TEIF+QE  +DTGL
Sbjct: 474 TEIFVQETADDTGL 487


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/371 (82%), Positives = 336/371 (90%), Gaps = 3/371 (0%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTG+YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS N
Sbjct: 114 MQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV+QSG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSF 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSG+NFCLGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCG
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCG 350

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEI+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR 
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRR 410

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVL+PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEP
Sbjct: 411 VSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEP 470

Query: 361 TEIFIQEMEED 371
           TEIFI+++ ED
Sbjct: 471 TEIFIKDVSED 481


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 304/371 (81%), Positives = 334/371 (90%), Gaps = 3/371 (0%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTG+YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS N
Sbjct: 114 MQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV+QSG+VFTCGDNSS CCGHRDT RPIF+PRLVE+LKG+PCKQV AGLNFT FLT 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSF 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSG+NFCLGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCG
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCG 350

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEI+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR 
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRR 410

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VS KVL+PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHD LR CLEP
Sbjct: 411 VSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEP 470

Query: 361 TEIFIQEMEED 371
           TEIFI+++ ED
Sbjct: 471 TEIFIKDVFED 481


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/372 (80%), Positives = 337/372 (90%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQI TGRYHTLLISN SV+SCGSSLCGVLGHG ETTQCV+FTRINFP + +V QVSAS N
Sbjct: 114 MQIATGRYHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV QSGQVFTCGDNSSFCCGHRDT+  IFRPRLVEAL G+PCKQV+ G NF+ FLT 
Sbjct: 174 HAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NT+GQLGHG+TL+ PTPK +  L E+GSV+QIAAGPSY+LAV  +G VYSF
Sbjct: 234 QGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQH+E QPR +QTFR K IHVV VSAGDEH VALDS+G VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEIDKT+P+PL+SLK+HLAVQVCARKRKTFVLVDTG VYGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVLRPR LDSLR H VSQISTGLYHTVVVT++G++FGFGDNERAQLGH++LRGCLEP
Sbjct: 414 VSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEP 473

Query: 361 TEIFIQEMEEDT 372
           TEIFI ++++++
Sbjct: 474 TEIFIHDLDDES 485


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/371 (81%), Positives = 334/371 (90%), Gaps = 3/371 (0%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQITTG+YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+ P    VV VSAS N
Sbjct: 114 MQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV+QSG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +GHV+TCG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSF
Sbjct: 234 QGHVYTCGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSF 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSG+NFCLGHGEQHDELQPR IQ FRRKGIH+VRVSAGDEH VALDS+G+VYTWGKGYCG
Sbjct: 291 GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCG 350

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDEI+KT PE L+SLK+ LAVQVCARKRKTFVLV++GSVYGFG MGFGSLGF DR 
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRR 410

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVL+PRILD+LRAHHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEP
Sbjct: 411 VSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEP 470

Query: 361 TEIFIQEMEED 371
           T+IFI++  ED
Sbjct: 471 TQIFIKDTSED 481


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/365 (77%), Positives = 318/365 (87%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQI TG+YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++N
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+AFVLQSGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+ 
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            GH +TCGSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSF
Sbjct: 234 EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVLRPR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEP
Sbjct: 414 VSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEP 473

Query: 361 TEIFI 365
           TEIF+
Sbjct: 474 TEIFL 478


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/365 (77%), Positives = 318/365 (87%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQI TG+YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++N
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+AFVLQSGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+ 
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            GH +TCGSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LA+T +G VYSF
Sbjct: 234 EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVLRPR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEP
Sbjct: 414 VSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEP 473

Query: 361 TEIFI 365
           TEIF+
Sbjct: 474 TEIFL 478


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 281/365 (76%), Positives = 318/365 (87%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQI TG+YHTLLI+NS V+SCG SL GVL HGPETTQCV+FT I FP  A V QVSA++N
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQN 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+AFVLQSG+V TCGDNSS CCGH DT+RPIFRP+LVE LKG PCKQV AGL+FT FL+ 
Sbjct: 174 HSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSR 233

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            GH +TCGSNTHGQLGHGDT+DRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSF
Sbjct: 234 EGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSF 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSGSNFCLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCG 353

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DK  P+ L +LK+ LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRG 413

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VSDKVLRPR+L+ L+ H VSQ+STGLYHT+VVT  GR+FGFGDNERAQLGH++LRGCLEP
Sbjct: 414 VSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEP 473

Query: 361 TEIFI 365
           TEIF+
Sbjct: 474 TEIFL 478


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/375 (71%), Positives = 314/375 (83%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS N
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV + G+VFTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSF
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSF 285

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +NFCLGHG+QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCG
Sbjct: 286 GSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCG 345

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DKT PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG
Sbjct: 346 ALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRG 405

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RPR+LDSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+P
Sbjct: 406 SSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKP 465

Query: 361 TEIFIQEMEEDTGLA 375
           TEI  Q+  E+  +A
Sbjct: 466 TEIMFQKSMEEIVIA 480


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/375 (71%), Positives = 314/375 (83%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS N
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV + G+VFTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSF
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSF 285

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +NFCLGHG+QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCG
Sbjct: 286 GSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCG 345

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DKT PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG
Sbjct: 346 ALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRG 405

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RPR+LDSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+P
Sbjct: 406 SSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKP 465

Query: 361 TEIFIQEMEEDTGLA 375
           TEI  Q+  E+  +A
Sbjct: 466 TEIMFQKSMEEIVIA 480


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/375 (71%), Positives = 314/375 (83%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS N
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV + G+VFTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSF
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSF 285

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +NFCLGHG+QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCG
Sbjct: 286 GSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCG 345

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DKT PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG
Sbjct: 346 ALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRG 405

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RPR+LDSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+P
Sbjct: 406 SSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKP 465

Query: 361 TEIFIQEMEEDTGLA 375
           TEI  Q+  E+  +A
Sbjct: 466 TEIMFQKSMEEIVIA 480


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 267/375 (71%), Positives = 311/375 (82%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS N
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHN 164

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV +SG+VFTCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT 
Sbjct: 165 HAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTR 224

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SF
Sbjct: 225 DGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSF 284

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +NFCLGHG+QHDEL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ G+VYTWG+GYCG
Sbjct: 285 GSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCG 344

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DKT PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGF DRG
Sbjct: 345 ALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRG 404

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV+RPR+L+SL+ H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+P
Sbjct: 405 TSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKP 464

Query: 361 TEIFIQEMEEDTGLA 375
           TEI  Q+  ED  +A
Sbjct: 465 TEIMFQKSIEDIPIA 479


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/376 (70%), Positives = 307/376 (81%), Gaps = 1/376 (0%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQCV+F+R++FP+ + VV +SA  N
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHN 164

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV ++GQVFTCGDNSS CCGH D  R IFRP  +EALKG  CKQV  GL+FT  LT 
Sbjct: 165 HAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTR 224

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR  PK I   E    VVQ+AAG SY  AVT +G V+SF
Sbjct: 225 EGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSF 284

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +NFCLGHG+QH+EL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCG
Sbjct: 285 GSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCG 344

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHGDE DKT PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGFPDR 
Sbjct: 345 ALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRE 404

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            SDKV++P +LDSLR H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+P
Sbjct: 405 SSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKP 464

Query: 361 TEI-FIQEMEEDTGLA 375
           TEI F +   ED  +A
Sbjct: 465 TEIMFHKSSMEDIAIA 480


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score =  346 bits (888), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 183/207 (88%)

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           PSY+L+   NG VYSFGSG+NFCLGHG+QHDELQP  IQ FRRKGIH+VR+SAGDEH VA
Sbjct: 81  PSYILSAIENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVA 140

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +DS+G+VYTWGKGYCGALGHGDEID T P+ L+SLK+ L VQVC RKRKTFVLV++GS+Y
Sbjct: 141 VDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMY 200

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           GFG MGFGSLGF DR VSDKVL+PRILD+LRAHHVSQISTGLYHT+V+T RG +FGFGDN
Sbjct: 201 GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDN 260

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEED 371
           ERAQLGHDTL  CLEPT+IFI+   ED
Sbjct: 261 ERAQLGHDTLTSCLEPTQIFIKHTYED 287



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGH 123
           +++G V++ G  ++FC GH D +  + +P  ++    KG+   +++AG      +   G 
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDEL-QPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGF 146

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS- 182
           V+T G    G LGHGD +D  TPK +  L+    VVQ+         +  +G +Y FGS 
Sbjct: 147 VYTWGKGYCGALGHGDEIDNTTPKLLTSLKN-QLVVQVCVRKRKTFVLVNSGSMYGFGSM 205

Query: 183 --GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
             GS   L        L+PR + T R    HV ++S G  H + + S G+++ +G     
Sbjct: 206 GFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTMVITSRGHIFGFGDNERA 263

Query: 241 ALGH 244
            LGH
Sbjct: 264 QLGH 267



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I+ G  H + + SN  V++ G   CG LGHG E          +  +   VVQV   +
Sbjct: 129 VRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQL-VVQVCVRK 187

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
                ++ SG ++  G       G  D   +  + +PR+++ L+     Q++ GL  T  
Sbjct: 188 RKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMV 247

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTL 141
           +T RGH+   G N   QLGH DTL
Sbjct: 248 ITSRGHIFGFGDNERAQLGH-DTL 270



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQV 71
           I N +V+S GS     LGHG +  +        F     H+V++SA + HA  V  +G V
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFV 147

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           +T G       GH D       P+L+ +LK     QV      T  L   G ++  GS  
Sbjct: 148 YTWGKGYCGALGHGDEIDNT-TPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMG 206

Query: 132 HGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
            G LG  D    D+     I        V QI+ G  + + +T  G ++ FG      LG
Sbjct: 207 FGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLG 266

Query: 190 HGEQHDELQPRAI 202
           H      L+P  I
Sbjct: 267 HDTLTSCLEPTQI 279


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 165/238 (69%), Positives = 194/238 (81%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ TGRYHTLL+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS N
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHN 164

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFVL+SG+VFTCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT 
Sbjct: 165 HAAFVLESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTR 224

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+TCGSNTHGQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SF
Sbjct: 225 DGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSF 284

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           GS +NFCLGHG+QHDEL PRAIQ+F+ + IHVVRVSAGDEH VALD+ GYV+  G+ Y
Sbjct: 285 GSCTNFCLGHGDQHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGERY 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++CGS+  G LGHG    +    S      +  V+ I+A  ++   V  +G V++ G  
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVFTCGDN 181

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           S+ C GHGE    +  R +Q    KGI   +V+ G    V L   G VYT G    G LG
Sbjct: 182 SSLCCGHGEVGRTIF-RPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLG 240

Query: 244 HGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           HGD ID+  P+ +   + S   VQ+ A    TF + D G+V+ FG      LG  D+   
Sbjct: 241 HGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQ--H 298

Query: 303 DKVLRPRILDSL--RAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           D++L PR + S   R  HV ++S G  H V +   G ++  G+
Sbjct: 299 DELL-PRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGE 340



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 9/220 (4%)

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           +S   +E     +Q+A G  + L V  +  VYS GS     LGHG    +    +  +F 
Sbjct: 93  QSSGTVETTSGSMQVATGRYHTLLVH-DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFP 151

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL--SSLKSHLA 264
                V+ +SA   H   +  SG V+T G       GHG E+ +T+  P+   +LK    
Sbjct: 152 SLSC-VINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIPC 209

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-AHHVSQIS 323
            QV      T +L   G VY  G    G LG  D    D+   P++++    +  V QI+
Sbjct: 210 KQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGD--TIDRA-TPKLIELFEGSTPVVQIA 266

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            G  +T  VTD G +  FG      LGH      L P  I
Sbjct: 267 AGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAI 306



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARK 271
           ++V+ G  H + +  S  VY+ G   CG LGHG +  +       S  S    + + A  
Sbjct: 105 MQVATGRYHTLLVHDSS-VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASH 163

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
                ++++G V+  G     SL      V   + RP  +++L+     Q++TGL  TV+
Sbjct: 164 NHAAFVLESGEVFTCG--DNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVI 221

Query: 332 VTDRGRLFGFGDNERAQLGH-DTL-RGCLEPTEIF 364
           +T  G+++  G N   QLGH DT+ R   +  E+F
Sbjct: 222 LTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELF 256


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/370 (45%), Positives = 239/370 (64%), Gaps = 9/370 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASEN 60
           +  GRYHTLL+     +++CG+    VLG  P  +       I  P+AA  +VQ+SA+ N
Sbjct: 112 VAAGRYHTLLVDRKGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFN 170

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAAFV +SGQV+T GDN S CCG  ++ +PI +P LV  L+  PC+QV+ G  +T  LT 
Sbjct: 171 HAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVALTR 230

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G + + G N+HGQLG G+T ++  P+ I    E   V Q++AG  + LAVT +G ++S+
Sbjct: 231 NGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSW 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G GSN+CLGH +   EL+P+ ++      + ++  +AGDEH  A+DS GYVYTWGKGYCG
Sbjct: 291 GYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCG 350

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           ALGHG   D+  P  +++LKS  AVQV AR+RKTFVL D G+V+ FGWM + SLG   + 
Sbjct: 351 ALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLGVQGKS 410

Query: 301 VSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG-----HDTL 354
            SD V+ P+ LD +L  H VS I+ G+YHT+V+T +G +FGFGDN+ +QLG     ++T 
Sbjct: 411 ASDTVVSPQSLDLALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDSSQLGPVSVTNETP 470

Query: 355 RGCLEPTEIF 364
                P E+F
Sbjct: 471 LAVRIPAEVF 480



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 10/209 (4%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           V +AAG  + L V   G +Y+ G+G +  LG       LQ  A          +V++SA 
Sbjct: 110 VLVAAGRYHTLLVDRKGELYACGTGGSV-LGQNPAVSNLQRPASIPLPAAATRIVQISAN 168

Query: 219 DEHVVALDSSGYVYTWGKGY---CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
             H   +  SG VYT+G      CG    G  I K  P  +++L+ +   QV   +  T 
Sbjct: 169 FNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISK--PTLVTTLERNPCQQVSTGQGYTV 226

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHTVVVTD 334
            L   G ++ +G    G LG   +G + +  RPR ++    ++ V+Q+S G+ HT+ VT 
Sbjct: 227 ALTRNGELFSWGCNSHGQLG---QGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTK 283

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            G+LF +G      LGHD     L P  +
Sbjct: 284 SGQLFSWGYGSNYCLGHDDFLTELRPKRV 312



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 23/173 (13%)

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-----TLPEPLSSLKSHLAVQV 267
           V V+AG  H + +D  G +Y  G G    LG    +       ++P P ++ +    VQ+
Sbjct: 110 VLVAAGRYHTLLVDRKGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATR---IVQI 165

Query: 268 CARKRKTFVLVDTGSVYGFG-----WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
            A       + ++G VY FG       G G  G P       + +P ++ +L  +   Q+
Sbjct: 166 SANFNHAAFVTESGQVYTFGDNVSCCCGVGESGQP-------ISKPTLVTTLERNPCQQV 218

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           STG  +TV +T  G LF +G N   QLG    +    P +  I+E  E   +A
Sbjct: 219 STGQGYTVALTRNGELFSWGCNSHGQLGQGNTQEQFRPRQ--IEEFNESNPVA 269


>gi|147858211|emb|CAN79677.1| hypothetical protein VITISV_011751 [Vitis vinifera]
          Length = 454

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 178/341 (52%), Gaps = 36/341 (10%)

Query: 31  HGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFVLQSGQVFTCGDNSSF----CCGH 84
           H P  T  + F  + + +    HV++V   EN        G V     +  +       +
Sbjct: 138 HHPSHTYTILFLSMRYVTRYRRHVMKVEPFENEQVAAASMGTVKNWAISFEYMEIILPAN 197

Query: 85  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DR 143
            +  +P      +      P  QV+   N   F+   G   TCG+ +  + GHGDT+   
Sbjct: 198 DNETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTVCPM 257

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
                +  L+EV    Q+ A  S+   +   G V++ G   +  LG+G+  D        
Sbjct: 258 FRLDFVEALKEV-PYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVD-------- 308

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
              R+ + +V +  G + V                 GAL HGDEI KT PE LSSLKSHL
Sbjct: 309 ---RRTLKIVELLEGVDPV-----------------GALDHGDEIGKTAPEILSSLKSHL 348

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
           AVQVC  KRKTFVLVDTGS YG G MGFGS GFPDRG SDKV RP ILD+LR H++SQ+S
Sbjct: 349 AVQVCVWKRKTFVLVDTGSAYGLGQMGFGSFGFPDRGDSDKVTRPWILDNLRGHYISQMS 408

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           TGLY T+ V ++G++FG GDNER +LGHDTLRG  E  EIF
Sbjct: 409 TGLYRTITVINKGQVFGLGDNERVRLGHDTLRGSPELAEIF 449


>gi|374921939|gb|AFA26147.1| E3 ubiquitin-protein ligase HERC2-like protein, partial [Lolium
           perenne]
          Length = 102

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 88/102 (86%)

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           QVCARKRKTFVL D GSV  FGWMGFGSLGFPDRG SDKV++PR+LDSLR H+VSQISTG
Sbjct: 1   QVCARKRKTFVLTDEGSVIAFGWMGFGSLGFPDRGSSDKVMQPRVLDSLRGHYVSQISTG 60

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           LYHTV VT++G +FGFGDNERAQLG + +R CL+PTEI   +
Sbjct: 61  LYHTVAVTNKGIVFGFGDNERAQLGQEYIRECLKPTEIMFHK 102


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 182/355 (51%), Gaps = 14/355 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H++ L+S + V S G    G LGHG +    +S T ++      VV V+   
Sbjct: 19  LLISAGASHSVALLSGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGA 77

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H     +S  QV++ G       GH +++  +F P+ ++AL G+  KQ+  G +    +
Sbjct: 78  DHTTAYSESFTQVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHGLRIKQIACGDSHCLAV 136

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y
Sbjct: 137 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELY 195

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G   
Sbjct: 196 GWGWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSK 253

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +    
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV---- 309

Query: 299 RGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            GV D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 310 -GVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 363



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDG-HEVVSVTCGADH 79

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALH--GLRIKQIACGDSHCLAVT 137

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 197

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 254

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 255 GQLGHGDFEDHLTPHKL 271



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 242

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 301

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 302 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 359

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LGHG+ ID+ +P+ +  L +
Sbjct: 360 QLGHGESIDRNIPKMIEVLSA 380



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 6/211 (2%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+ I+AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  VV V+ 
Sbjct: 18  VLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSAL--DGHEVVSVTC 75

Query: 218 GDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G +H  A   S   VY+WG G  G LGHG+  D   P+P+ +L      Q+         
Sbjct: 76  GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLA 135

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V  +G    G LG    G ++  L P+ + + +   V  ++ G  HT  VT+ G
Sbjct: 136 VTMDGEVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            L+G+G      LG       L P ++   E
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 223



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 178 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 236

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 295

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 353

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGHGESIDRNIPKMIEVLSADG 382



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 228 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 286

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 287 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 345

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 346 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 180/352 (51%), Gaps = 11/352 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 59
           ++ G  H++ L+S+ +V S G    G LGHG    + V    +  + P  A VV +  ++
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV-ICGAD 83

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  A+  +  Q+++ G       GH +++  +F P+ +EAL+G+  KQ+  G +    +T
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSD-VFHPQPIEALQGIKIKQIACGDSHCLAVT 142

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G VH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  A+  +G +Y 
Sbjct: 143 DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGV-CVKMIAAGAEHTAAILEDGDLYG 201

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LG G+++D L P  + +   +G  +V V+ G  H V + SSG +YT+G    
Sbjct: 202 WGWGQYGNLGLGDRNDRLVPEKVSSV--EGEKMVLVACGWRHTVTVSSSGDLYTYGWSKY 259

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD  D  +P  L +LK     Q+    R T  +   G +YG+GW  FG +G  D 
Sbjct: 260 GQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADN 319

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                 ++    D  +   V+Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 320 VDHCSPVQVIFPDEQK---VAQVACGWRHTLALTENKNVFSWGRGTSGQLGH 368



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 163/322 (50%), Gaps = 12/322 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQV 108
           V  VSA  NH+  +L S  V + G       GH D  +RP+  P L+      G+    +
Sbjct: 22  VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVI 79

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               + T +   +  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHC 138

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LAVT  G V+S+G   N  LG G   D L P+ I  F  +G+ V  ++AG EH  A+   
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAF--EGVCVKMIAAGAEHTAAILED 196

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +G +Y +GW
Sbjct: 197 GDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGW 256

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG  D    +  L P  L++L+   +SQI+ G  HT+ V   G+L+G+G N+  Q
Sbjct: 257 SKYGQLGHGD---FEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQ 313

Query: 349 LG-HDTLRGCLEPTEIFIQEME 369
           +G  D +  C     IF  E +
Sbjct: 314 VGVADNVDHCSPVQVIFPDEQK 335



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 6/259 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++++  V S G +  G LG G  T   +   +I+      V  ++A   
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAE 188

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +L+ G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 189 HTAAILEDGDLYGWGWGQYGNLGLGDRNDRLV-PEKVSSVEGEKMVLVACGWRHTVTVSS 247

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +  L++   + QIA G  + +AV G+G +Y +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDR-FISQIAGGWRHTMAVAGDGKLYGW 306

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G  +  D   P  +Q        V +V+ G  H +AL  +  V++WG+G  G
Sbjct: 307 GWNKFGQVGVADNVDHCSP--VQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSG 364

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LGHG+ ID+  P+ + +L
Sbjct: 365 QLGHGEIIDRNTPKMIDAL 383



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 3/214 (1%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           +V  ++AG ++ +A+  +  V S+G G +  LGHG+  D   P  +  F   GI  V + 
Sbjct: 21  TVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVIC 80

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
             D      D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+         
Sbjct: 81  GADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLA 140

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D G V+ +G    G LG    G ++  L P+ + +     V  I+ G  HT  + + G
Sbjct: 141 VTDAGQVHSWGRNQNGQLGL---GNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDG 197

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            L+G+G  +   LG       L P ++   E E+
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVP-EKVSSVEGEKMVLVACGWRH 241

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EALK     Q+  G   T  +   
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGD 300

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G  D +D  +P + I P E+   V Q+A G  + LA+T N  V+S+
Sbjct: 301 GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ--KVAQVACGWRHTLALTENKNVFSW 358

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMIDALSLDG 387


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 57
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 149 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 207

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 208 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 265

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 266 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 325

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 326 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 376



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 107
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 145

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 146 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 203

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 263

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 264 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 320

Query: 348 QLG 350
           Q+G
Sbjct: 321 QVG 323



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 98  EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 153
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 17  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 76

Query: 154 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 77  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 134

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 135 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 194

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 195 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 251

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 284



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 196

Query: 61  HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 253

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 254 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 312

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 370

Query: 239 CGALGHGDEIDKTLPEPLSSLKS 261
            G LGHG+ +D+ +P+ + +L S
Sbjct: 371 SGQLGHGEIVDRNIPKMIDALSS 393



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 191 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 249

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 250 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 366

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G++  LGHGE  D   P+ I      G
Sbjct: 367 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 395



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 301

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 302 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 361 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 399


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 57
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 320

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 321 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 371



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 107
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 259 WSKYGQLGHGD---FEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 315

Query: 348 QLG 350
           Q+G
Sbjct: 316 QVG 318



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 98  EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 153
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 154 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 61  HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 307

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 365

Query: 239 CGALGHGDEIDKTLPEPLSSLKS 261
            G LGHG+ +D+ +P+ + +L S
Sbjct: 366 SGQLGHGEIVDRNIPKMIDALSS 388



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 361

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G++  LGHGE  D   P+ I      G
Sbjct: 362 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 390



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 296

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 297 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 394


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/324 (35%), Positives = 166/324 (51%), Gaps = 17/324 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 10  VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 68

Query: 112 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +   R  V++ G    G+LGHG++ D  TPK I  L  +  + QIA G S+ LA
Sbjct: 69  ADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLA 127

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+   G 
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--EGISIKMVAAGAEHTAAVTEDGE 185

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           ++ WG G  G LG GD  D+ +P+ +SS+     V V    R T  +   G +Y +GW  
Sbjct: 186 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 245

Query: 291 FGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           +G LG   F DR      L P  L++LR  ++SQIS G  HT+ +T  G+L+G+G N+  
Sbjct: 246 YGQLGHGDFEDR------LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFG 299

Query: 348 QLGH-DTLRGCLEPTEI-FIQEME 369
           Q+G  D +  C  P +I F Q+ +
Sbjct: 300 QVGAGDNIDHC-SPIQIKFPQDQK 322



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S + V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 62  A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
             A+ +   +V++ G       GH +++  +  P+ ++AL G+  +Q+  G +    +T+
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSS-DLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGW 189

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D  
Sbjct: 248 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-- 305

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +     P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 306 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 355



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFEGISIKMVAAGAE 175

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G++F  G       G  D N  +  P+ V ++ G     V  G   T  ++ 
Sbjct: 176 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  DR  P  +  L    ++ QI+ G  + +A+T +G +Y +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGW 293

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  IQ    +   V+++S G  H +A+     V++WG+G  G
Sbjct: 294 GWNKFGQVGAGDNIDHCSP--IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNG 351

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LGHG+ +D+  P  L +L
Sbjct: 352 QLGHGESVDRNTPMILEAL 370



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 170 VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 228

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 229 TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 345

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LGHGE  D   P  ++     G
Sbjct: 346 GRGTNGQLGHGESVDRNTPMILEALSVDG 374


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 59
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LG G+++D L P  + +   +G  +V ++ G  H + + SSG +YT+G    
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSV--EGEKMVLIACGWRHTITVSSSGSLYTYGWSKY 262

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  D 
Sbjct: 263 GQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD- 321

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             +D    P  +       V+Q++ G  HT+  T++  +F +G     QLGH  +    +
Sbjct: 322 --TDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNK 379

Query: 360 PTEI 363
           P  I
Sbjct: 380 PVMI 383



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 167/331 (50%), Gaps = 12/331 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R + P A  VV VSA  +H+  +L    + + G       GH D    +    L      
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 103 VP-CKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            P    V  G + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q
Sbjct: 75  APGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIKQ 133

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           IA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG E
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGAE 191

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  A+   G +Y WG G  G LG GD  D+ +PE +SS++    V +    R T  +  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSS 251

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           GS+Y +GW  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+G
Sbjct: 252 GSLYTYGWSKYGQLGHGD---FEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYG 308

Query: 341 FGDNERAQLG-HDTLRGCLEPTEIFIQEMEE 370
           +G N+  Q+G  DT   C  P ++   E ++
Sbjct: 309 WGWNKFGQVGVGDTDDHCF-PVQVKFPEDQK 338



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAE 191

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N  +  P  V +++G     +  G   T  ++ 
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +  L++  S+ QI+ G  + +A+T +G +Y +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-SSISQISGGWRHTMALTSDGKLYGW 309

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  +Q    +   V +V+ G  H +A      V++WG+G  G
Sbjct: 310 GWNKFGQVGVGDTDDHCFP--VQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSG 367

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LGHG+ +D+  P  + +L
Sbjct: 368 QLGHGEIVDRNKPVMIDAL 386



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-EKVSSVEGEKMVLIACGWRH 244

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSD 303

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G GDT D   P  +    E   V Q+A G  + LA T    V+S+G
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVK-FPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LGHGE  D  +P  I      G
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMIDALSPDG 390



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 16/196 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT+ +S+S S+++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSSISQISGGWRH 296

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   G+++  G N     G  DT+   F P  V+  +     QV  G   T   T +
Sbjct: 297 TMALTSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEK 355

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTP-------------KSIAPLEEVGSVVQIAAGPSYM 168
            +V + G  T GQLGHG+ +DR  P             K + P   V    ++   PS  
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPFAAKVWVSPSER 415

Query: 169 LAVTGNGVVYSFGSGS 184
            A+  +  V + G G+
Sbjct: 416 YAIVPDEKVPNSGEGT 431


>gi|224152872|ref|XP_002337285.1| predicted protein [Populus trichocarpa]
 gi|222838689|gb|EEE77054.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 83/87 (95%)

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
           MGFGSLGFPDRG+SDKV+RPR+LDSLRA HVSQISTGLYHTVVVT+RG++FGFGDNERAQ
Sbjct: 1   MGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQ 60

Query: 349 LGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           LGHDTLRGCL+PTEIF+QE  +DT LA
Sbjct: 61  LGHDTLRGCLQPTEIFVQETADDTDLA 87



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 85  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 141
           R  +  + RPR++++L+     Q++ GL  T  +T RG +   G N   QLGH DTL
Sbjct: 11  RGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQLGH-DTL 66


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 192/378 (50%), Gaps = 15/378 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I+      +  ++   
Sbjct: 17  ISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLV-ISALDDCEISSITCGA 75

Query: 60  NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H     +S + V++ G       GH +++  +F PR ++ LKG+  KQ+  G +    +
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSS-DLFIPRAIKGLKGLEIKQIACGDSHCLAI 134

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G VH+ G N +GQLG G T D   P  +A  E + +V  +AAG  +  AVT +G +Y
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGI-AVKMLAAGAEHTAAVTESGKLY 193

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D L P  +     + +++V  + G  H +A+ +SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLV--ACGWRHTIAVANSGNLYTFGWSK 251

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  +P  + +LK+     V    R T  L + G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGC-- 309

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 357
            G +D    P+++  +    V++++ G  HTV +TDRG ++ +G     QLGH D +  C
Sbjct: 310 -GNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC 368

Query: 358 LEPTEIFIQEMEEDTGLA 375
           + P  I   E+    GLA
Sbjct: 369 V-PKRI---ELLSADGLA 382



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 14/303 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ VSA  +H   +L    V + G       GH D       P ++ AL       +T G
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSITCG 74

Query: 112 LNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            + T   T R      V++ G    G+LGHG++ D   P++I  L+ +  + QIA G S+
Sbjct: 75  ADHT---TARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSH 130

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LA+TG+G V+S+G   N  LG G   D L P  +  F  +GI V  ++AG EH  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAF--EGIAVKMLAAGAEHTAAVTE 188

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG +Y WG G  G LG GD  D+ +P  ++++       V    R T  + ++G++Y FG
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFG 248

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG  D    +  L P  + +L+   +  +S G  HTV + + G L+G+G N+  
Sbjct: 249 WSKYGQLGHGD---FEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFG 305

Query: 348 QLG 350
           Q+G
Sbjct: 306 QVG 308



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 58/259 (22%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQH-------------------- 194
           V+ ++AG S+ +A+    +V S+G G +  LGHG   E+H                    
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 195 ------------------------------DELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
                                         D   PRAI+    KG+ + +++ GD H +A
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGL--KGLEIKQIACGDSHCLA 133

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +   G V++WG+   G LG G   D  +P  +++ +      + A    T  + ++G +Y
Sbjct: 134 ITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLY 193

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G+GW  +G+LG  DR   +  L P  + ++    ++ ++ G  HT+ V + G L+ FG +
Sbjct: 194 GWGWGRYGNLGLGDR---NDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWS 250

Query: 345 ERAQLGHDTLRGCLEPTEI 363
           +  QLGH      L P ++
Sbjct: 251 KYGQLGHGDFEDHLVPHQV 269



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 7/159 (4%)

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLA 264
           RR+   V+ VSAG  H VAL S   V +WG+G  G LGHGD  ++ LP  +S+L    ++
Sbjct: 13  RRR---VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEIS 69

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
              C     T     T +VY +GW  FG LG    G S  +  PR +  L+   + QI+ 
Sbjct: 70  SITCGADHTTARSESTRTVYSWGWGDFGRLG---HGNSSDLFIPRAIKGLKGLEIKQIAC 126

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           G  H + +T  G +  +G N+  QLG       L P ++
Sbjct: 127 GDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKV 165



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ ++NS ++++ G S  G LGHG      V   ++       +  VS    H
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPH-QVQALKNKTIQAVSGGWRH 286

Query: 62  AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              + + G+++  G N      CG+ D +     P+L+  +      +VT G   T  +T
Sbjct: 287 TVALDEDGELYGWGWNKFGQVGCGNTDDHNS---PKLITGIVNEKVTRVTCGWRHTVAIT 343

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 166
            RG+V++ G  T GQLGHGD +DR  PK I  L   G   Q I + PS
Sbjct: 344 DRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGLACQGIESSPS 391


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 186/388 (47%), Gaps = 29/388 (7%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++ S +V++ GS+  G LGHG    +      I       ++Q +A   
Sbjct: 55  QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRI-IRSLQGIRIIQAAAGAG 113

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
               V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+
Sbjct: 114 RTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLS 173

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNG 175
             GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+       
Sbjct: 174 REGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGM 232

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG
Sbjct: 233 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWG 292

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG     SLG
Sbjct: 293 WGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLG 352

Query: 296 F----PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDN 344
                        VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  
Sbjct: 353 HNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAG 412

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           ++ QLG          TE+  QE E  T
Sbjct: 413 DKGQLG----------TELVAQESERGT 430


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 22/347 (6%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           SVFS G  + G LGHG +T   ++  +I     + +  ++A  NH+  + +SG V++ G 
Sbjct: 48  SVFSFGMGMYGKLGHG-DTANQLAPKKIE--GLSDIQAIAAGTNHSLALTKSGDVYSFGF 104

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH +T+  +  P+ +E L  +  + + AG   +  LT  G V++ G+ T G LG
Sbjct: 105 GLFGRLGHGNTDSQL-EPKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           HG+T D+ TPK I  L +V +   IAAG ++ LA+T +G VYSFG G    LGHG+   +
Sbjct: 161 HGNTEDQSTPKKIESLSDVQA---IAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ 217

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L+P+ I+        +  ++AG  H +AL  SG VY++G G  G LGHGD  ++  P+ +
Sbjct: 218 LEPKKIEDLS----DIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI 273

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
             L    A  V A    +  L  +G VY FG    G LG    G +D  L P+ ++ L+ 
Sbjct: 274 EDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLG---HGDTDDQLTPKKIEGLK- 327

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +  I+ G +H++ +T  G ++ FG N  + LGH      LEP +I
Sbjct: 328 -DIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTANQLEPKKI 372



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 170/331 (51%), Gaps = 23/331 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+L ++ S  V+S G  L G LGHG   +Q            + +  ++A + H
Sbjct: 83  IAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQ---LEPKKIEGLSDIQAIAAGDFH 139

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + +SG V++ G+ +S   GH +T      P+ +E+L  V  + + AG N +  LT  
Sbjct: 140 SLALTKSGDVYSFGNGTS-GLGHGNTEDQ-STPKKIESLSDV--QAIAAGGNHSLALTKS 195

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V++ G    G+LGHGDT  +  PK I   E++  +  IAAG ++ LA+T +G VYSFG
Sbjct: 196 GDVYSFGFGLFGRLGHGDTDSQLEPKKI---EDLSDIQAIAAGGNHSLALTKSGDVYSFG 252

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G +  LGHG+  ++L P+ I+        +  V+AG  H +AL  SG VY++G+G  G 
Sbjct: 253 WGLHGQLGHGDTENQLTPKKIEDLS----DIQAVAAGANHSLALTKSGEVYSFGRGNTGQ 308

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D+  P+ +  LK   A  + A    +  L  +G VY FG  G   LG  D   
Sbjct: 309 LGHGDTDDQLTPKKIEGLKDIQA--IAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTA- 364

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               L P+ ++ L    +  I+ G  H++ +
Sbjct: 365 --NQLEPKKIEGLT--DIQAIAAGANHSLAL 391



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 22/306 (7%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           SE +A  V     VF+ G       GH DT   +  P+ +E L  +  + + AG N +  
Sbjct: 40  SETNANLV----SVFSFGMGMYGKLGHGDTANQL-APKKIEGLSDI--QAIAAGTNHSLA 92

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G    G+LGHG+T  +  PK I  L ++ +   IAAG  + LA+T +G V
Sbjct: 93  LTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQA---IAAGDFHSLALTKSGDV 149

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           YSFG+G++  LGHG   D+  P+ I++       V  ++AG  H +AL  SG VY++G G
Sbjct: 150 YSFGNGTS-GLGHGNTEDQSTPKKIESLS----DVQAIAAGGNHSLALTKSGDVYSFGFG 204

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LGHGD   +  P+ +  L    A  + A    +  L  +G VY FGW   G LG  
Sbjct: 205 LFGRLGHGDTDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLG-- 260

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G ++  L P+ ++ L    +  ++ G  H++ +T  G ++ FG     QLGH      
Sbjct: 261 -HGDTENQLTPKKIEDLS--DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQ 317

Query: 358 LEPTEI 363
           L P +I
Sbjct: 318 LTPKKI 323


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 186/388 (47%), Gaps = 29/388 (7%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++ S +V++ GS+  G LGHG    +      I       ++Q +A   
Sbjct: 150 QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRI-IRSLQGIRIIQAAAGAG 208

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
               V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+
Sbjct: 209 RTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLS 268

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNG 175
             GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+       
Sbjct: 269 REGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGM 327

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG
Sbjct: 328 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWG 387

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG     SLG
Sbjct: 388 WGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLG 447

Query: 296 F----PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDN 344
                        VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  
Sbjct: 448 HNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAG 507

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           ++ QLG          TE+  QE E  T
Sbjct: 508 DKGQLG----------TELVAQESERGT 525


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 177/355 (49%), Gaps = 26/355 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H++ L+  + V S G    G LGHG +    +S T ++      VV V+   
Sbjct: 19  LLISAGASHSVALLXGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGA 77

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+     QV++ G +             +F P+ ++AL G+  KQ+  G +    +
Sbjct: 78  DHTTAYSESFTQVYSWGCD-------------LFTPQPIKALHGLRIKQIACGDSHCLAV 124

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y
Sbjct: 125 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELY 183

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G   
Sbjct: 184 GWGWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSK 241

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +    
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV---- 297

Query: 299 RGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            GV D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 298 -GVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 351



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 171

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 172 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 230

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 289

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 290 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 347

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LGHG+ ID+ +P+ +  L +
Sbjct: 348 QLGHGESIDRNIPKMIEVLSA 368



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 19/257 (7%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDG-HEVVSVTCGADH 79

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             A + +   VYS+G             D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGC------------DLFTPQPIKALH--GLRIKQIACGDSHCLAVT 125

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 185

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 186 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 242

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 243 GQLGHGDFEDHLTPHKL 259



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 166 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 224

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 283

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 341

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGHGESIDRNIPKMIEVLSADG 370



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 270
           V+ +SAG  H VAL     V +WG+G  G LGHGD  D+  P  LS+L  H  V V C  
Sbjct: 18  VLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGA 77

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T        VY +G                 +  P+ + +L    + QI+ G  H +
Sbjct: 78  DHTTAYSESFTQVYSWG---------------CDLFTPQPIKALHGLRIKQIACGDSHCL 122

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG  T    L P +I
Sbjct: 123 AVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKI 155



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 216 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 274

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 333

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 334 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 371


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 175/350 (50%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR   +  L P  + S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR---NDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYGW 300

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  G
Sbjct: 301 GWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNG 358

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LG G+ +D+  P+ + +L
Sbjct: 359 QLGIGESVDRNFPKIIEAL 377



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 10/370 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 310

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+  +      T
Sbjct: 311 NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEI--VDRNT 368

Query: 362 EIFIQEMEED 371
            + I  +  D
Sbjct: 369 PVLIDALSSD 378



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 112 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  + + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMIAAGAEHTAAVTEDGD 190

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 54/265 (20%)

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 207
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 208 -------------------------------------------------KGIHVVRVSAG 218
                                                            +G+ + +++ G
Sbjct: 67  ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D H +A+  +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + 
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVT 186

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           + G +YG+GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           + +G ++  QLGH      L P ++
Sbjct: 244 YTYGWSKYGQLGHGDFEDHLVPHKV 268



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALTSEGKLYGW 298

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G   D   P  +     + I   +V+ G  H +AL     V++WG+G  G
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS--QVACGWRHTLALSEKKNVFSWGRGTSG 356

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LG+G+ +D+  P  + +L S
Sbjct: 357 QLGNGEIVDRNTPVLIDALSS 377



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+  D  +P  ++   E   + Q+A G  + LA++    V+S+G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWG 351

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LG+GE  D   P  I      G
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLIDALSSDG 379



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDSTISQISGGWRH 285

Query: 62  AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +   G+++  G N       G+ D +     P  V   +     QV  G   T  L+
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHS---SPGQVSFPEDQKISQVACGWRHTLALS 342

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            + +V + G  T GQLG+G+ +DR TP  I  L   GS  +
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 67

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 125

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++ P  + S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 186 GWGRYGNLGLGDR--TDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 242

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 243 GQLGHGDLEDHLIPHKL 259



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 288

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 276

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 277 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 332

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 374


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 156/302 (51%), Gaps = 10/302 (3%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 109
            V+ +SA  +H+  +L    V + G       GH D  +RP   P  +  L G+    +T
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT--PTQLSTLDGLDIISIT 76

Query: 110 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G + T  +   R  V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ 
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHC 135

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LAVT +G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSIKMVAAGAEHTAAVTED 193

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +Y WG G  G LG GD  D+ +PE +S +     + V    R T  +  +G +Y +GW
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGW 253

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG  D    +  L P  +++LR  ++S IS G  HT+ +T  G L+G+G N+  Q
Sbjct: 254 SKYGQLGHGDF---EDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQ 310

Query: 349 LG 350
           +G
Sbjct: 311 VG 312



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 8/351 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S + V S G    G LGHG    +    T+++      ++ ++   +H
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTP-TQLSTLDGLDIISITCGADH 81

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                +S  +V++ G       GH +++  +F P+ ++AL  +  +Q+  G +    +T+
Sbjct: 82  TTSYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHSLKIRQIACGDSHCLAVTM 140

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG G T D   P+ I   + V S+  +AAG  +  AVT +G +Y +
Sbjct: 141 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SIKMVAAGAEHTAAVTEDGELYGW 199

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G+++D L P  +      G  ++ V+ G  H +++ SSG +YT+G    G
Sbjct: 200 GWGRYGNLGLGDRNDRLVPEKVSLV--NGDKMIMVACGWRHTISVSSSGGLYTYGWSKYG 257

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D   P  + +L+      +    R T  L   G++YG+GW  FG +G  D  
Sbjct: 258 QLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNI 317

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                ++ +     +AH + QIS G  HT+ +T+R  +F +G     QLGH
Sbjct: 318 DHCSPVQVKFPHE-QAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGH 367



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 104 PCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           P +QV   +AG + +  L     V + G    GQLGHGD  DRPTP  ++ L+ +  ++ 
Sbjct: 16  PIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGL-DIIS 74

Query: 161 IAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           I  G  +  + + + + VYS+G G    LGHG   D   P+ I+      + + +++ GD
Sbjct: 75  ITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS--LKIRQIACGD 132

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            H +A+   G V +WG+   G LG G   D  +P+ + + +      V A    T  + +
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G +YG+GW  +G+LG  DR   +  L P  +  +    +  ++ G  HT+ V+  G L+
Sbjct: 193 DGELYGWGWGRYGNLGLGDR---NDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLY 249

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G ++  QLGH      L P ++
Sbjct: 250 TYGWSKYGQLGHGDFEDHLTPHKV 273



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSIKMVAAGAE 185

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G+++  G       G  D N  +  P  V  + G     V  G   T  ++ 
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSLVNGDKMIMVACGWRHTISVSS 244

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D  TP  +  L +   +  I+ G  + +A+T +G +Y +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRD-SYISMISGGWRHTMALTSDGNLYGW 303

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  ++    +   +V++S G  H +A+     V++WG+G  G
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNG 363

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LGHG+ +D+ LP+ +  L +
Sbjct: 364 QLGHGESMDRNLPKIIEVLSA 384



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   +++  +   ++ V+    H
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSLVNGDKMIMVACGWRH 238

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  VEAL+      ++ G   T  LT  
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALRDSYISMISGGWRHTMALTSD 297

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G+++  G N  GQ+G GD +D  +P  +  P E+  S+VQI+ G  + LA+T    V+S+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSW 357

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEVLSADG 386


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG G+ +D+  P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 255

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 316 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 362



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 79

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 137

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 255 GQLGHGDLEDHLIPHKL 271



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 183

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 241

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 242 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 300

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 301 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG G+ +D+  P+ + +L
Sbjct: 359 GQLGIGESVDRNFPKIIEAL 378



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 18  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 77

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 78  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 134

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 135 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 167



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 236

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 237 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 354

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 355 RGTNGQLGIGESVDRNFPKIIEALSVDG 382



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 230 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 288

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 344

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 345 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 386


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-PIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 55/311 (17%)

Query: 1   MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 58
           + +T G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHGIRIKQIACG 128

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           ++H   V   G+V + G N +   G  DT   +  P+ ++A +G+P K V AG   T  +
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G ++  G   +G LG GD  DR  P+ +        +  +A G  + ++V+ +G +Y
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-KMSMVACGWRHTISVSYSGALY 246

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI---------------------------- 210
           ++G      LGHG+  D L P  ++      I                            
Sbjct: 247 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 306

Query: 211 ----------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
                                  VV+VS G  H +A+     V+ WG+G  G LG G+ +
Sbjct: 307 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESV 366

Query: 249 DKTLPEPLSSL 259
           D+  P+ + +L
Sbjct: 367 DRNFPKIIEAL 377



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 8/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L++ + + S G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 137

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGV-CVKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 254

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 255 LGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 311

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+
Sbjct: 312 NDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGN 361



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 164/325 (50%), Gaps = 8/325 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVICG 74

Query: 112 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 133

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+   G 
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGVCVKMIAAGAEHTAAVTEDGD 191

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGLA 375
                    P ++   E ++ + +A
Sbjct: 309 VGNNDDHCSPVQVHFPEDQKISQVA 333



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 54/258 (20%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI------ 210
           +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F   GI      
Sbjct: 15  TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICG 74

Query: 211 ---------------------------------------------HVVRVSAGDEHVVAL 225
                                                         + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAV 134

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYG 194

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKL 269



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAE 181

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 240

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRHTMALTSEGKLYGW 299

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G   D   P  +Q    +   + +V+ G  H +AL     V++WG+G  G
Sbjct: 300 GWNKFGQVGVGNNDDHCSP--VQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSG 357

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LG+G+ +D+  P  + +L +
Sbjct: 358 QLGNGEIVDRNTPVLIDALST 378



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 234

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+  D  +P  +    E   + Q+A G  + LA++    V+S+G
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCSPVQVH-FPEDQKISQVACGWRHTLALSEKKNVFSWG 352

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LG+GE  D   P  I      G
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLIDALSTDG 380



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSTISQISGGWRH 286

Query: 62  AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK---ISQVACGWRHTLALS 343

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
            + +V + G  T GQLG+G+ +DR TP  I  L   GS
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 181/367 (49%), Gaps = 20/367 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  H++ + S   V+S GS+  G LGHG  T        I       ++Q +A+  
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEDGWQPRPIRALQGIRIIQATAATG 207

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  SGQV+  G    FC      + ++ +  P+LVE+LK +   Q   G  FT  L
Sbjct: 208 RTMLISDSGQVYAFG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVL 266

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV 176
           +  G V+T    + G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGM 326

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  + ++AG  H   +   G V TWG
Sbjct: 327 SVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWG 386

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E    +P+ +  LK+  AV V A    TFV+ D+G  Y FG+   G+LG
Sbjct: 387 WGRHGCLGHGNEECALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLG 446

Query: 296 FPDRGVSDK-----VLRPRILDSLRAHH--VSQIST-----GLYHTVVVTDRGRLFGFGD 343
                   +     VL P+++ S++ ++  V QIS       + HT  +T+ G+L+ FG 
Sbjct: 447 HDPENPEQEHMHADVLTPKLVTSMKQNYERVIQISLTNSVYWIAHTFALTESGKLYAFGA 506

Query: 344 NERAQLG 350
            ++ QLG
Sbjct: 507 GDKGQLG 513



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           QV A   H+  V   G V++ G NSS   GH  T    ++PR + AL+G+   Q TA   
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEDGWQPRPIRALQGIRIIQATAATG 207

Query: 114 FTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            T  ++  G V+  G       ++G+  +    TP+ +  L+ +  VVQ A G  +   +
Sbjct: 208 RTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVESLKNI-FVVQAAIGNYFTAVL 266

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 228
           +  G VY+F  GS+  L H    ++++PR +     + I VV+++AG  +++ L    S 
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPL-LGALEHIPVVQIAAGFCYLLCLACQPSG 325

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             VY+ G G  G LGHG E D+  P  +    L +   + + A      V+   G V  +
Sbjct: 326 MSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTW 385

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW   G LG    G  +  L P++++ L+      ++ G Y T VV+D G  + FG  E 
Sbjct: 386 GWGRHGCLG---HGNEECALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGES 442

Query: 347 AQLGHD 352
             LGHD
Sbjct: 443 GTLGHD 448



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 4/160 (2%)

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
           +RR+   V+   AG  H +A+ S G VY++G    G LGHG   D   P P+ +L+    
Sbjct: 143 YRREKSQVI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRI 199

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           +Q  A   +T ++ D+G VY FG   F      + G S  V  P++++SL+   V Q + 
Sbjct: 200 IQATAATGRTMLISDSGQVYAFGKQYFCENEIGNEG-SKMVTTPQLVESLKNIFVVQAAI 258

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           G Y T V++  GR++ F      +L H T    +EP  + 
Sbjct: 259 GNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLL 298



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 101/258 (39%), Gaps = 59/258 (22%)

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           Q+ AGP + +AVT  GVVYSFGS S+  LGHG   D  QPR I+    +GI +++ +A  
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRAL--QGIRIIQATAAT 206

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVL 277
              + +  SG VY +GK Y      G+E  K  T P+ + SLK+   VQ       T VL
Sbjct: 207 GRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVL 266

Query: 278 VDTGSVY--------------------------------------GFGWM---------- 289
              G VY                                      GF ++          
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGM 326

Query: 290 -----GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFG 342
                G G  G    G       PR+++  +  ++    I+ G +H  VV   GR+  +G
Sbjct: 327 SVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWG 386

Query: 343 DNERAQLGHDTLRGCLEP 360
                 LGH      L P
Sbjct: 387 WGRHGCLGHGNEECALVP 404


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 8/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                 P  ++      V+Q++ G  HT+  T++  +F +G     QLGH
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGH 361



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 112 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 351 HDTLRGCLEPTEIFIQEMEE 370
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  H L ++ +  V S G +  G LG G      +  T   F   + V  ++A   
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAE 181

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N   F P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDIYGWGWGRYGNLGLGDRNDR-FVPEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 299

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  +     +   V +V+ G  H +A      V+ WG+G  G
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQ--KVAQVACGWRHTLAFTEKKNVFAWGRGTSG 357

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LGHG+ +D+  P  + +L
Sbjct: 358 QLGHGEIVDRNTPVIIDAL 376



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 207
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 208 ------------------------------------------KGIHVVRVSAGDEHVVAL 225
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T    V+++G
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFTEKKNVFAWG 352

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LGHGE  D   P  I      G
Sbjct: 353 RGTSGQLGHGEIVDRNTPVIIDALSPDG 380


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 62  A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
             A+     +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSA--GGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L + +  Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ RI D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRIPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           P    V+ +SA  +H+  +L    V + G       GH D    +  P  + AL      
Sbjct: 12  PPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDDHQIV 70

Query: 107 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G 
Sbjct: 71  SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGD 129

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S+ LAVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 187

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              G +Y WG G  G LG GD  D+ +PE ++S        V    R T  +  +G++Y 
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G LG  D    +  L P  L++L    +SQIS G  HT+ +T  G+L+G+G N+
Sbjct: 248 YGWSKYGQLGHGDL---EDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 346 RAQLG-HDTLRGCLEPTEIFIQEMEE 370
             Q+G  + L  C  P ++ I + ++
Sbjct: 305 FGQVGVGNNLDQC-SPVQVRIPDDQK 329



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVY 178
            G ++T G + +GQLGHGD  D   P     LE +G+ V  QI+ G  + +A+T +G +Y
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHK---LEALGNSVISQISGGWRHTMALTSDGKLY 298

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G 
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSP--VQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356

Query: 239 CGALGHGDEIDKTLPEPLSSL 259
            G LG G+ +D+  P+ + +L
Sbjct: 357 NGQLGIGESLDRNFPKIIEAL 377



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLV-PHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +  + +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-IPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESLDRNFPKIIEALSVDG 381



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPH-KLEALGNSVISQISGGWRH 287

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +   G+++  G N     G   + D   P+ + R+ +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRIPDDQKVV---QVSCGWRHTLAV 343

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           T R +V   G  T+GQLG G++LDR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQ 385


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 67

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 125

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++ P  + S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 186 GWGRYGNLGLGDR--TDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 242

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 243 GQLGHGDLEDHLIPHKL 259



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGFRHTMALTSDGKLYG 288

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 342

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 343 RGTNGQLGIGESVDRNFPKIIEALSVDG 370


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 162/317 (51%), Gaps = 12/317 (3%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 108
           + V+ +SA  +H   +L    V + G       GH DT+ RP+  P  + AL       +
Sbjct: 14  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSI 71

Query: 109 TAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
             G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+
Sbjct: 72  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSH 130

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LAVT  G V S+G   N  LG G   D L P+ IQ F  KG+ +  V+AG EH VA+  
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--KGVPIKMVAAGAEHSVAITE 188

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G +Y WG G  G LG GD  D+  PE +SS+     V V    R T  +  +G +Y +G
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYG 248

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G LFG+G N+  
Sbjct: 249 WSKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 348 QLG-HDTLRGCLEPTEI 363
           Q+G  D L  C  P ++
Sbjct: 306 QVGVGDNLDHC-SPVQV 321



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 183/357 (51%), Gaps = 11/357 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  HT+ L+S + V S G    G LGHG    + +  T+++   A H+  ++   
Sbjct: 17  LLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLP-TQLSALDAQHIDSIACGA 75

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +
Sbjct: 76  DHTLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAV 134

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G+T D   P+ I   + V  +  +AAG  + +A+T NG +Y
Sbjct: 135 TMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGV-PIKMVAAGAEHSVAITENGELY 193

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D   P  + +       +V V+ G  H +++ SSG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRWNPEKVSSVDCD--KMVMVACGWRHTISVSSSGGIYTYGWSK 251

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+  D  +P+ L +L   L  QV    R +  L  TG ++G+GW  FG +G  D
Sbjct: 252 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGD 311

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTL 354
              +     P  +   +   V QIS G  HT+ VT++  +F +G     QLGH DT+
Sbjct: 312 ---NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 9/328 (2%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 129

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V   G+V + G N +   G  +T   +  P+ ++A KGVP K V AG   +  +T 
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMVAAGAEHSVAITE 188

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+ +G +Y++
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVD-CDKMVMVACGWRHTISVSSSGGIYTY 247

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G ++ WG    G
Sbjct: 248 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 298
            +G GD +D   P  +   +    VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGL 326
              S K++    +D     H+   +T L
Sbjct: 366 DRNSPKIIEALSVDGSAGPHIESSNTDL 393


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 110
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 111 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 350 G-HDTLRGCLEPTEI 363
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 59
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 300 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 3   ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 210
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 211 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 217 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 336 GRLFGFGDNERAQLG 350
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-------------VQIAAGPSYM 168
            ++ + G    GQLGHG+ +DR TPK I  L   GS              V++   PS  
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLESSNVVPMTVKVWVSPSER 412

Query: 169 LAVTGNGVVYSFGSGSN 185
            A+  +  V   G+G++
Sbjct: 413 FALVPDENVCKSGNGTD 429


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 110
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 111 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 350 G-HDTLRGCLEPTEI 363
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 59
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 300 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 3   ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 210
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 211 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 217 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 336 GRLFGFGDNERAQLG 350
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 178/354 (50%), Gaps = 15/354 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H++ LIS + V S G    G LGHG +T   +  T+++   A  +V V    
Sbjct: 18  LLISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPTQLSALDAQQIVSVVCGA 76

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+     +V++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +
Sbjct: 77  DHTLAYSESKVEVYSWGWGDFGRLGHGNSS-DLFIPQPIRALQGLRIKQIACGDSHCLAV 135

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G T D   P+ I   + V  +  +AAG  + +A+T NG +Y
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELY 194

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D   P  +     K   +V V+ G  H +++ SSG +YT+G   
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSVDCDK---MVLVACGWRHTISVSSSGELYTYGWSK 251

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  +P  L +    L  QV    R T  L   G +YG+GW  FG +    
Sbjct: 252 YGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQV---- 307

Query: 299 RGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GV D V R  P  +       V+QIS G  HT+ VT++  ++ +G     QLG
Sbjct: 308 -GVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLG 360



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 157/315 (49%), Gaps = 9/315 (2%)

Query: 37  QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 96
           Q V  T  + P    V+ +SA  +H+  ++    V + G       GH DT+  +  P  
Sbjct: 2   QEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL-PTQ 60

Query: 97  VEALKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 155
           + AL       V  G + T  +   +  V++ G    G+LGHG++ D   P+ I  L+ +
Sbjct: 61  LSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGL 120

Query: 156 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
             + QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V
Sbjct: 121 -RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTF--QGVPIKMV 177

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           +AG EH VA+  +G +Y WG G  G LG GD  D+ +PE +S     + +  C   R T 
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGW-RHTI 236

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            +  +G +Y +GW  +G LG  D       L P  L +     + Q+S G  HT+ +T  
Sbjct: 237 SVSSSGELYTYGWSKYGQLGHGD---CKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 336 GRLFGFGDNERAQLG 350
           G+L+G+G N+  Q+G
Sbjct: 294 GQLYGWGWNKFGQVG 308



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 11/316 (3%)

Query: 1   MQITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 58
           + +  G  HTL  S S V  +S G    G LGHG  +   +    I       + Q++  
Sbjct: 70  VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIP-QPIRALQGLRIKQIACG 128

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           ++H   V   G+V + G N +   G   T   +  P+ ++  +GVP K V AG   +  +
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVAAGAEHSVAI 187

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G ++  G   +G LG GD  DR  P+ ++   +   +V +A G  + ++V+ +G +Y
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV--DCDKMVLVACGWRHTISVSSSGELY 245

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LGHG+  D L P  +Q F  K I   +VS G  H +AL + G +Y WG   
Sbjct: 246 TYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLI--CQVSGGWRHTMALTTGGQLYGWGWNK 303

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G +G GD +D+  P  +         Q+    R T  + +  +VY +G    G LG  D
Sbjct: 304 FGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGD 363

Query: 299 RGVSDKVLRPRILDSL 314
              +     P+I+++L
Sbjct: 364 ---TIDWNYPKIIEAL 376



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+ LP  LS+L +   V V    
Sbjct: 17  VLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGA 76

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T    ++   VY +GW  FG LG    G S  +  P+ + +L+   + QI+ G  H +
Sbjct: 77  DHTLAYSESKVEVYSWGWGDFGRLG---HGNSSDLFIPQPIRALQGLRIKQIACGDSHCL 133

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG  T    L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKI 166



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H++ I+ N  ++  G    G LG G    +C+   +++      +V V+    H
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIP-EKVSV-DCDKMVLVACGWRH 234

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG+++T G +     GH D    +  P  ++A       QV+ G   T  LT  
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +DR +P  +  P ++   V QI+ G  + +AVT    VYS+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVAQISCGWRHTIAVTEKDNVYSW 351

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LG G+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG 380



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S  +++ G S  G LGHG      V      F S   + QVS    H
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF-SDKLICQVSGGWRH 286

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   GQ++  G N     G  D N     P  V+        Q++ G   T  +T +
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK 345

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            +V++ G  T+GQLG GDT+D   PK I  L   GS  Q
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDGSCGQ 384


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 182/376 (48%), Gaps = 28/376 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V++ G +  G LGHG  T +      +       ++Q +A   
Sbjct: 148 QAVAGPGHSIAVTSKGEVYTFGYNNSGQLGHG-HTEEQARIQPVRSLQGIRIIQAAAGAA 206

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +   G+V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L
Sbjct: 207 RTMLISDDGKVYACGKESFGEAEYGGQGT-QPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 265

Query: 119 TIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-- 172
           +  G V+T      G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+   
Sbjct: 266 SREGKVYTFSWGNDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQ 321

Query: 173 GNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            NG+ VYS G G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V
Sbjct: 322 PNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRV 381

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            TWG G  G LGHG+E  +++P+ +  L    AV V      TFV+ D G VY FG    
Sbjct: 382 CTWGWGRYGCLGHGNEECESVPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGES 441

Query: 292 GSLG----FPDRGVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLF 339
            SLG    F ++G     VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+
Sbjct: 442 ASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQISLTNSIYWNAHTFALTESGKLY 501

Query: 340 GFGDNERAQLGHDTLR 355
            FG  ++ QLG +  R
Sbjct: 502 AFGAGDQGQLGAELDR 517



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H +A+ S G VYT+G    G LGHG   ++   +P+ SL+    +Q  A   +T +
Sbjct: 151 AGPGHSIAVTSKGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTML 210

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 211 ISDDGKVYACGKESFGEAEYGGQG-TQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 269

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +++ F      +LGH T    +EP  + 
Sbjct: 270 KVYTFSWGNDGRLGHQTEAADVEPRPLL 297


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 185/384 (48%), Gaps = 24/384 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++   +V++ GS+  G LGHG    +      I       ++Q +A   
Sbjct: 150 QAIAGPGHSIAVTTGGAVYTFGSNSSGQLGHGSLEEEWRPRI-IRSLQGIRIIQAAAGAG 208

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
               V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+
Sbjct: 209 RTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLS 268

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNG 175
             GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+       
Sbjct: 269 REGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGM 327

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG
Sbjct: 328 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWG 387

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + SL +  A+ V      TFV+ D G VY FG     SLG
Sbjct: 388 WGRYGCLGHGNEECESVPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLG 447

Query: 296 F----PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDN 344
                        VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  
Sbjct: 448 HNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAG 507

Query: 345 ERAQLGHDTL-----RGCLEPTEI 363
           ++ QLG + +     RG  E  EI
Sbjct: 508 DKGQLGTELVAQQSERGTPERVEI 531


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 112 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 351 HDTLRGCLEPTEIFIQEMEE 370
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 8/332 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                 P  ++      V+Q++ G  HT+  T
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 207
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 208 ------------------------------------------KGIHVVRVSAGDEHVVAL 225
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 10/350 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 62  AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G++ D L P  + +    G     V+ G  H +++  SG +YT+G    G
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKXSXVACGWRHTISVSYSGALYTYGWSKYG 245

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 306 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 69

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G  VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 127

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+++  R+  S      S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 188 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKXSXVACGWRHTISVSYSGALYTYGWSKY 244

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH  L   L P ++
Sbjct: 245 GQLGHGDLEDHLIPHKL 261



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 8/260 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKXVAAGAE 173

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 174 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVS 231

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  +  A+T +G +Y 
Sbjct: 232 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGARHTXALTSDGKLYG 290

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 291 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 348

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG G+ +D+  P+ + +L
Sbjct: 349 GQLGIGESVDRNFPKIIEAL 368



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  +      G  +V V+ 
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL--DGHQIVSVTC 65

Query: 218 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G +H VA   SG  VY+WG G  G LGHG+  D   P P+ +L      Q+         
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 125

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V  +G    G LG  D   ++  L P+ + +     +  ++ G  HT  VT+ G
Sbjct: 126 VTXEGEVQSWGRNQNGQLGLGD---TEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDG 182

Query: 337 RLFGFGDNERAQLG 350
            L+G+G      LG
Sbjct: 183 DLYGWGWGRYGNLG 196



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 67

Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 68  DHTVAYSQSGXEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 124

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            VT  G +  +G N+  QLG       L P +I
Sbjct: 125 AVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 157



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+          V+    H
Sbjct: 168 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKXSXVACGWRH 226

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 227 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGARHTXALTSD 285

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 344

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G+N  LG GE  D   P+ I+     G
Sbjct: 345 RGTNGQLGIGESVDRNFPKIIEALSVDG 372


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 110 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 349 LG 350
           +G
Sbjct: 306 VG 307



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 178/355 (50%), Gaps = 14/355 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   
Sbjct: 16  LLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGA 74

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +
Sbjct: 75  DHTLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAV 133

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y
Sbjct: 134 TMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELY 192

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G   
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSK 250

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +    
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV---- 306

Query: 299 RGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            GV D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 307 -GVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 168 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 298
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGL 326
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 110 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 349 LG 350
           +G
Sbjct: 306 VG 307



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 178/355 (50%), Gaps = 14/355 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   
Sbjct: 16  LLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGA 74

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +
Sbjct: 75  DHTLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAV 133

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y
Sbjct: 134 TMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELY 192

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G   
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSK 250

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +    
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV---- 306

Query: 299 RGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            GV D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 307 -GVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 168 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 298
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGL 326
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ +SA  +H+  +L    V T G       GH D    +  P ++  L+G+    V  G
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL-SPTILSTLEGLEIISVICG 74

Query: 112 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +      V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ LA
Sbjct: 75  ADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGL-KIKQIACGDSHCLA 133

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   G 
Sbjct: 134 VTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVPIKMVAAGAEHTAAVTEDGE 191

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ +PE +S       V V    R T  +  +G +Y +GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK 251

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D   +D ++ P  L++L+   +SQIS G  HT+ VT  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGD--YADHLI-PHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 308



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 172/355 (48%), Gaps = 14/355 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H++ L+S + V + G    G LGHG +    +S T ++      ++ V    
Sbjct: 17  LLISAGASHSVALLSGNVVCTWGRGEDGQLGHG-DAQDRLSPTILSTLEGLEIISVICGA 75

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+      V++ G       GH +++  +F P+ +  L G+  KQ+  G +    +
Sbjct: 76  DHTIAYSESHTDVYSWGWGDFGRLGHGNSS-DLFTPQPIRQLHGLKIKQIACGDSHCLAV 134

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V + G N +GQLG G T D   P+ I   + V  +  +AAG  +  AVT +G +Y
Sbjct: 135 TMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-PIKMVAAGAEHTAAVTEDGELY 193

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G++ D L P  +      G  +V V+ G  H +++ SSG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRKDRLVPEKVSL--PHGEKMVMVACGWRHTISVSSSGGLYTYGWSK 251

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  +P  L +L+     Q+    R T  +   G +YG+GW  FG +    
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV---- 307

Query: 299 RGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            GV D V R  P  +       V  IS G  HT+ VT+R  +F +G     QLG+
Sbjct: 308 -GVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGN 361



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + +  L     V T G    GQLGHGD  DR +P  ++ LE +  ++ +  G  +
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGL-EIISVICGADH 77

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLH--GLKIKQIACGDSHCLAVT 135

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGW 195

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR   D+++ P  +       +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 196 GWGRYGNLGLGDR--KDRLV-PEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKY 252

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 253 GQLGHGDYADHLIPHQL 269



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+ I+AG S+ +A+    VV ++G G +  LGHG+  D L P  + T   +G+ ++ V  
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTL--EGLEIISVIC 73

Query: 218 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G +H +A  +S   VY+WG G  G LGHG+  D   P+P+  L      Q+         
Sbjct: 74  GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLA 133

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V  +G    G LG    G ++  L P+ + + +   +  ++ G  HT  VT+ G
Sbjct: 134 VTMEGQVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDG 190

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            L+G+G      LG    +  L P ++ +   E+
Sbjct: 191 ELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEK 224



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 59/313 (18%)

Query: 1   MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 58
           + +  G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHG-NSSDLFTPQPIRQLHGLKIKQIACG 127

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           ++H   V   GQV + G N +   G   T   +  P+ ++A +GVP K V AG   T  +
Sbjct: 128 DSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G ++  G   +G LG GD  DR  P+ ++ L     +V +A G  + ++V+ +G +Y
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY------ 232
           ++G      LGHG+  D L P  ++    +G  + ++S G  H +A+ S G +Y      
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEAL--QGSFISQISGGWRHTMAVTSDGKLYGWGWNK 303

Query: 233 ----------------------------------------------TWGKGYCGALGHGD 246
                                                         +WG+G  G LG+G+
Sbjct: 304 FGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGE 363

Query: 247 EIDKTLPEPLSSL 259
             D+ +P  + +L
Sbjct: 364 CTDRNVPVIIKAL 376



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  ++  G    G LG G    + V   +++ P    +V V+    H
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVP-EKVSLPHGEKMVMVACGWRH 234

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  +EAL+G    Q++ G   T  +T  
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +DR +P  +  PLE+   V+ I+ G  + LAVT    V+S+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ--KVILISCGWRHTLAVTERQNVFSW 351

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LG+GE  D   P  I+     G
Sbjct: 352 GRGTNGQLGNGECTDRNVPVIIKALSVDG 380



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  HT+ +S+S  +++ G S  G LGHG      +   ++     + + Q+S   
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPH-QLEALQGSFISQISGGW 284

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFT 115
            H   V   G+++  G N     G  D    + R   V+    +P +Q    ++ G   T
Sbjct: 285 RHTMAVTSDGKLYGWGWNKFGQVGVGDN---VDRSSPVQVK--LPLEQKVILISCGWRHT 339

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
             +T R +V + G  T+GQLG+G+  DR  P  I  L   GS  Q
Sbjct: 340 LAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDGSCGQ 384


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 179/370 (48%), Gaps = 22/370 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V++ G +  G LGHG  T        +       ++Q +A   
Sbjct: 47  QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAA 105

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +   G+V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L
Sbjct: 106 RTMLISDDGKVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 164

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT--GNG 175
           +  G V+T      G+LGH        P+ +  PLE V  VVQIAAG  Y+LA+    NG
Sbjct: 165 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENV-PVVQIAAGYCYLLALACQPNG 223

Query: 176 V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           + VYS G G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TW
Sbjct: 224 MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTW 283

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGHG+E  +++P+ +  L    AV V      TFV+ D G VY FG     SL
Sbjct: 284 GWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASL 343

Query: 295 G----FPDRGVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFG 342
           G    F ++G     VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF FG
Sbjct: 344 GHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFG 403

Query: 343 DNERAQLGHD 352
             ++ QLG +
Sbjct: 404 AGDQGQLGTE 413



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 50  AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 110 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 168

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +++ F      +LGH T    +EP  + 
Sbjct: 169 KVYTFSWGNDGRLGHQTEAADVEPRPLL 196


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 180/373 (48%), Gaps = 28/373 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V++ G +  G LGHG  T        +       ++Q +A   
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAA 205

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +   G+V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L
Sbjct: 206 RTMLISDDGKVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 264

Query: 119 TIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-- 172
           +  G V+T      G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+   
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQ 320

Query: 173 GNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            NG+ VYS G G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V
Sbjct: 321 PNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 380

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            TWG G  G LGHG+E  +++P+ +  L    AV V      TFV+ D G VY FG    
Sbjct: 381 CTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGES 440

Query: 292 GSLG----FPDRGVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLF 339
            SLG    F ++G     VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF
Sbjct: 441 ASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLF 500

Query: 340 GFGDNERAQLGHD 352
            FG  ++ QLG +
Sbjct: 501 AFGAGDQGQLGTE 513



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 210 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 268

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +++ F      +LGH T    +EP  + 
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLL 296


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 191/389 (49%), Gaps = 32/389 (8%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           Q+  G  H++ + S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A  
Sbjct: 153 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMT 210

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNF 114
                +  SGQ +  G  S    G  +T     ++ +  P+LVE+LK +   Q   G  F
Sbjct: 211 GRTMLISDSGQAYVFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYF 267

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVT 172
           T  L+  G V+T      G+L H    +   P+ +    E   VVQIAAG  Y+L  A  
Sbjct: 268 TAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQ 327

Query: 173 GNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            +G+ VYS G G    LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V
Sbjct: 328 PSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRV 387

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            TWG G  G LGHG+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   
Sbjct: 388 CTWGWGSYGCLGHGNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGES 447

Query: 292 GSLG-FPD----RGVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLF 339
           GSLG  P+      + + VL P+++  ++     V QIS   +     HT  +T+ G+L+
Sbjct: 448 GSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLY 507

Query: 340 GFGDNERAQLG-----HDTLRGCLEPTEI 363
            FG  ++ QLG     H T +G  E  +I
Sbjct: 508 AFGAGDKGQLGVELGAHQTEKGKPERVDI 536



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R    SQ+  G  H++ VT +G ++ FG N   QLGH T     +P  I
Sbjct: 147 RRREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDVWQPRPI 195


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 191/389 (49%), Gaps = 32/389 (8%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           Q+  G  H++ + S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A  
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMT 206

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNF 114
                +  SGQ +  G  S    G  +T     ++ +  P+LVE+LK +   Q   G  F
Sbjct: 207 GRTMLISDSGQAYVFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYF 263

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVT 172
           T  L+  G V+T      G+L H    +   P+ +    E   VVQIAAG  Y+L  A  
Sbjct: 264 TAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQ 323

Query: 173 GNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            +G+ VYS G G    LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V
Sbjct: 324 PSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRV 383

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            TWG G  G LGHG+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   
Sbjct: 384 CTWGWGSYGCLGHGNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGES 443

Query: 292 GSLG-FPD----RGVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLF 339
           GSLG  P+      + + VL P+++  ++     V QIS   +     HT  +T+ G+L+
Sbjct: 444 GSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLY 503

Query: 340 GFGDNERAQLG-----HDTLRGCLEPTEI 363
            FG  ++ QLG     H T +G  E  +I
Sbjct: 504 AFGAGDKGQLGVELGAHQTEKGKPERVDI 532



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R    SQ+  G  H++ VT +G ++ FG N   QLGH T     +P  I
Sbjct: 143 RRREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDVWQPRPI 191


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 10/336 (2%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V++ G    G LG G  +      T ++      +V ++AS+ H AF+   G+V+T G 
Sbjct: 3   AVYALGRGDLGQLGIGDYSDHPTP-TSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N +   G R     +  P  V AL       +  G   T  +T  G + + G + +GQLG
Sbjct: 62  NDAGQLGVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 137 --HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
              G+ +D   P+ +    ++    ++AAG  + LA+TG+G VYSFG GS+  LGHG   
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P  +++    G+ V +++ G+ H  AL   G V+TWG+G  G LGHG   +  LP 
Sbjct: 180 GCSTPSLVKSLW--GLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + +L  H  +Q+      T  +   G +  F W G G  G    G  + VL P+ +  L
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRL--FSW-GHGLWGQTGHGTKEDVLSPKQVHQL 294

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               + Q+S G  HTVV+ DRG ++G+GD E+ QLG
Sbjct: 295 EGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 8/272 (2%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P  +  L G     + A    T FLT  G V+T GSN  GQLG     ++  P  +A L+
Sbjct: 26  PTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALD 85

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIH 211
               V  IA G  + +AVT  G + S+G      LG   G   D +QPR ++  R   +H
Sbjct: 86  -THMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRD--LH 142

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             RV+AG  H +AL  SG VY++G G  GALGHG+    + P  + SL      Q+   +
Sbjct: 143 FSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGE 202

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             +  L   G V+ +G   +G LG    G +  +  P  + +L  H V QI+ G  HT+ 
Sbjct: 203 NHSAALTVDGKVFTWGRGKYGQLG---HGSTQNIKLPVAVKALVDHDVIQIACGGDHTLA 259

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +T  GRLF +G     Q GH T    L P ++
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 6/301 (1%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I    YHT  +++   V++ GS+  G LG      Q V   R+       V  ++   
Sbjct: 38  VHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPI-RVAALDTHMVTHIACGF 96

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H   V ++G + + G +     G    N     +PR+V+  + +   +V AG   T  L
Sbjct: 97  KHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G  + G LGHG+     TP  +  L  +G V QIA G ++  A+T +G V+
Sbjct: 157 TGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAALTVDGKVF 215

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G G    LGHG   +   P A++        V++++ G +H +A+ S G +++WG G 
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDH--DVIQIACGGDHTLAITSDGRLFSWGHGL 273

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G  GHG + D   P+ +  L+  + VQV A  R T VL+D G VYG+G      LG  D
Sbjct: 274 WGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCD 333

Query: 299 R 299
           R
Sbjct: 334 R 334



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           H  +V+A   H   +  SG V++ GD SS   GH + +     P LV++L G+   Q+  
Sbjct: 142 HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD-GCSTPSLVKSLWGLGVTQIAC 200

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G N +  LT+ G V T G   +GQLGHG T +   P ++  L +   V+QIA G  + LA
Sbjct: 201 GENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVD-HDVIQIACGGDHTLA 259

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +G ++S+G G     GHG + D L P+  Q  + +G  +V+VSAG  H V L   G 
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGE 317

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           VY WG      LG  D  D        S   H+ V +C   R   VL++T
Sbjct: 318 VYGWGDCEQRQLGTCDRCD-------FSTYGHICVSLC---RCECVLMNT 357



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY+ G G    LG G+  D   P ++ T   K I  V ++A D H   L   G VYT G 
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDI--VHIAASDYHTAFLTDEGEVYTTGS 61

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG     ++ +P  +++L +H+   +    + T  + +TG++  +G   +G LGF
Sbjct: 62  NDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGF 121

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               + D V +PRI+   R  H S+++ G YHT+ +T  G ++ FGD     LGH  L G
Sbjct: 122 DSGNIVDGV-QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDG 180

Query: 357 CLEPTEI 363
           C  P+ +
Sbjct: 181 CSTPSLV 187



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 15/151 (9%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQ 54
           QI  G  H+  ++ +  VF+ G    G LGHG       S   I  P A        V+Q
Sbjct: 197 QIACGENHSAALTVDGKVFTWGRGKYGQLGHG-------STQNIKLPVAVKALVDHDVIQ 249

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           ++   +H   +   G++F+ G       GH  T   +  P+ V  L+G    QV+AG   
Sbjct: 250 IACGGDHTLAITSDGRLFSWGHGLWGQTGH-GTKEDVLSPKQVHQLEGRVLVQVSAGARH 308

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           T  L  RG V+  G     QLG  D  D  T
Sbjct: 309 TVVLLDRGEVYGWGDCEQRQLGTCDRCDFST 339


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 8/362 (2%)

Query: 3   ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ +   +V  S G    G LGHG    + V      F +      +  +++ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+  +  QV++ G       GH +++  +F P+ V AL+G+  KQ+  G +    +T+ 
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVRALQGIKIKQMACGDSHCLAVTMG 144

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P+ I   E +  V  IAAG  +  AVT +G +Y +G
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D   P  +     +G  +V ++ G  H + + SSG +YT+G    G 
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLV--EGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQ 261

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD  D   P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 262 LGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD--- 318

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           S     P  +       V+Q++ G  HT+  T++  +F +G     QLGH  +    +P 
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378

Query: 362 EI 363
            I
Sbjct: 379 MI 380



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L+   + + G       GH D    +  P ++          V  G
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICG 81

Query: 112 LNF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            +  T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 82  ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLA 140

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 141 VTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGICVKMIAAGAEHTAAVTEDGD 198

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ +PE +S ++    V +    R T  +  +G +Y +GW  
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 259 YGQLGHGDF---EDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 315

Query: 351 H-DTLRGCLEPTEIFIQEME 369
             D++  C     +F  E +
Sbjct: 316 AGDSVDHCSPVQVMFPAEQK 335



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 6/253 (2%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  H L ++    V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 130 QMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGT-TEDSLLPQKIQAFEGICVKMIAAGAE 188

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G ++  G       G  D N   F P  V  ++G     +  G   T  ++ 
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-FVPEKVSLVEGEKMVLIACGWRHTITVSS 247

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 306

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P  +Q        V +V+ G  H +A      V+ WG+G  G
Sbjct: 307 GWNKFGQVGAGDSVDHCSP--VQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSG 364

Query: 241 ALGHGDEIDKTLP 253
            LGHG+ +D+  P
Sbjct: 365 QLGHGEIVDRNKP 377



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVP-EKVSLVEGEKMVLIACGWRH 241

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +F P  VEALK     Q++ G   T  LT  
Sbjct: 242 TITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD++D  +P  +  P E+   V Q+A G  + LA T    V+++
Sbjct: 301 GKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ--KVAQVACGWRHTLAYTEKKNVFAW 358

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G++  LGHGE  D  +P  I      G
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMIDAISPDG 387



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 3   ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV------QV 55
           I  G  HT+ +S+S + ++ G S  G LGHG        F    FP     +      Q+
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHG-------DFEDHLFPHKVEALKDSSTSQI 287

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           S    H   +   G+++  G N     G  D+      P  V         QV  G   T
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPVQVMFPAEQKVAQVACGWRHT 346

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
              T + +V   G  T GQLGHG+ +DR  P  I  +   GS
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGS 388


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 112 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT  G V S+G   N  LG G   D L P+ IQ F    + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFES--VCVKMIAAGAEHTAAVTEDGD 190

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V+AG + +  L     + + G    GQLGHGD  DR  P  ++  +   ++  +  G  +
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD-APAITSVICGADH 76

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             A + + + VYS+G G    LGHG   D   P+ ++    +G+ + +++ GD H +A+ 
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL--QGLKIKQIACGDSHCLAVT 134

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + + G +YG+
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGW 194

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKY 251

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 252 GQLGHGDFEDHLVPHKV 268



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           G ++  G N  GQ+G G+  D  +P  ++
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 181/372 (48%), Gaps = 30/372 (8%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V+S GS+  G LGHG  T +      I       ++Q +A   
Sbjct: 150 QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHG-TTEEEWRPKPIRTLQGIRIIQAAAGAG 208

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT----NRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               +  SGQV+  G +S    G  +     ++ +  PRLVE+LK +   Q   G  FT 
Sbjct: 209 RTMLITDSGQVYAFGKDS---FGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTA 265

Query: 117 FLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTG 173
            L+  G V+T    + G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   
Sbjct: 266 VLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQP 324

Query: 174 NGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           +G+ VYS G G    LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V 
Sbjct: 325 SGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVC 384

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           TWG G  G LGHG+E  +  P+ + +L +  AV V      TFV+ + G VY FG     
Sbjct: 385 TWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESA 444

Query: 293 SLGFPDRGVSD-------KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRL 338
           SLG     V D        VL P ++ SL+     V QIS    +Y   HT  +T+ G+L
Sbjct: 445 SLGH--NAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKL 502

Query: 339 FGFGDNERAQLG 350
           + FG  ++ QLG
Sbjct: 503 YAFGAGDKGQLG 514



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 15/309 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           Q  A   H+  V   G V++ G NSS   GH  T    +RP+ +  L+G+   Q  AG  
Sbjct: 150 QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEE-WRPKPIRTLQGIRIIQAAAGAG 208

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            T  +T  G V+  G ++ G+  +G    +    P+ +  L+ +  VVQ A G  +   +
Sbjct: 209 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNI-FVVQAAIGNFFTAVL 267

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 228
           +  G VY+F  GS+  LGH    ++++P  +     + I VV+++AG  +++ L    S 
Sbjct: 268 SREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLG-ALEDIPVVQIAAGYCYLLCLACQPSG 326

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 285
             VY+ G G  G LGHG   D+  P  +   ++ L +Q   + A      V+   G V  
Sbjct: 327 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQT-LNLQPMVISAGAWHAAVVGRDGRVCT 385

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G LG    G  +    P+++D+L       ++TG Y T VV + G ++ FG  E
Sbjct: 386 WGWGRYGCLG---HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGE 442

Query: 346 RAQLGHDTL 354
            A LGH+ +
Sbjct: 443 SASLGHNAV 451



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 153 AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 212

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 213 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 271

Query: 337 RLFGFGDNERAQLGHDTLRGCLEP 360
           R++ F      +LGH T    +EP
Sbjct: 272 RVYTFSWGSDGKLGHHTDSNDMEP 295


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 180/369 (48%), Gaps = 24/369 (6%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V+S GS+  G LGHG  T +      I       ++Q +A   
Sbjct: 47  QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGT-TEEEWRPKPIRTLQGIRIIQAAAGAG 105

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
               +  SGQV+  G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+
Sbjct: 106 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLS 165

Query: 120 IRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV 176
             G V+T    + G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+
Sbjct: 166 REGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGM 224

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG
Sbjct: 225 SVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWG 284

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +  P+ + +L +  AV V      TFV+ + G VY FG     SLG
Sbjct: 285 WGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLG 344

Query: 296 FPDRGVSD-------KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGF 341
                V D        VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ F
Sbjct: 345 H--NAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAF 402

Query: 342 GDNERAQLG 350
           G  ++ QLG
Sbjct: 403 GAGDKGQLG 411



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 15/309 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           Q  A   H+  V   G V++ G NSS   GH  T    +RP+ +  L+G+   Q  AG  
Sbjct: 47  QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEE-WRPKPIRTLQGIRIIQAAAGAG 105

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            T  +T  G V+  G ++ G+  +G    +    P+ +  L+ +  VVQ A G  +   +
Sbjct: 106 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNI-FVVQAAIGNFFTAVL 164

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 228
           +  G VY+F  GS+  LGH    ++++P  +     + I VV+++AG  +++ L    S 
Sbjct: 165 SREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLG-ALEDIPVVQIAAGYCYLLCLACQPSG 223

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 285
             VY+ G G  G LGHG   D+  P  +   ++ L +Q   + A      V+   G V  
Sbjct: 224 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQT-LNLQPMVISAGAWHAAVVGRDGRVCT 282

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G LG    G  +    P+++D+L       ++TG Y T VV + G ++ FG  E
Sbjct: 283 WGWGRYGCLG---HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGE 339

Query: 346 RAQLGHDTL 354
            A LGH+ +
Sbjct: 340 SASLGHNAV 348



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 50  AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 109

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 110 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 168

Query: 337 RLFGFGDNERAQLGHDTLRGCLEP 360
           R++ F      +LGH T    +EP
Sbjct: 169 RVYTFSWGSDGKLGHHTDSNDMEP 192


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 9/351 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV-SASEN 60
           ++ G  H++ ++S   V S G    G LGHG +  +C++   I+  + A +  V   +E 
Sbjct: 18  VSCGSSHSVAILSCGIVTSWGRGEDGQLGHG-QADECLAPKAISTLTDAGIESVVCGAEY 76

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
             A     GQV++ G       GH D N  +F PR +E   G P  +V  G   T  +  
Sbjct: 77  TIAVAPSRGQVYSWGWGDFGRLGHGDCN-DVFVPRPIEFFSGRPVHRVACGDTHTLVVAG 135

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G + T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T +G V+S+
Sbjct: 136 EGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE-RVRSVACGSEHSLAATESGTVFSW 194

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG GE  D   P  +     +GI +V    G  H   +   G V+T+G    G
Sbjct: 195 GWGRYGNLGDGESQDRYLPTRVVGL--EGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYG 252

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D+T+P  +++L+      V    R T     +G++YG+GW  FG LG  D  
Sbjct: 253 QLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDS- 311

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            SD+     +  +L    VS ++ G  HTV VT+ GR++ +G     QLGH
Sbjct: 312 -SDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 6/212 (2%)

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
           EE   V  ++ G S+ +A+   G+V S+G G +  LGHG+  + L P+AI T    GI  
Sbjct: 10  EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIE- 68

Query: 213 VRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V  G E+ +A+  S G VY+WG G  G LGHGD  D  +P P+         +V    
Sbjct: 69  -SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T V+   G ++ FG    G LG    G ++  L P+++ +L+   V  ++ G  H++ 
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGL---GHTNDCLSPQLVVALQGERVRSVACGSEHSLA 184

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            T+ G +F +G      LG    +    PT +
Sbjct: 185 ATESGTVFSWGWGRYGNLGDGESQDRYLPTRV 216



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HTL+++    +F+ G +  G LG G  T  C+S   +       V  V+    
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLG-HTNDCLSPQLVVALQGERVRSVACGSE 180

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+    +SG VF+ G       G  ++ +  + P  V  L+G+       G   +  ++ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGES-QDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE 239

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V T G + +GQLGHGD  DR  P  +A L     +  +A G  + +A   +G +Y +
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT-RISSVAGGWRHTMAADSSGNLYGW 298

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG G+  D   P  +      G  V  V+ G  H VA+   G VY+WG+G  G
Sbjct: 299 GWNKFGQLGLGDSSDRPSPVLVGG-ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNG 357

Query: 241 ALGHGDEID 249
            LGHG E D
Sbjct: 358 QLGHGAEQD 366


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 178/376 (47%), Gaps = 20/376 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + SN   +S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 153 QAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHG-TTEEEWRPRQIRSLQGIRIIQAAAGPG 211

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  +G+V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 212 RTMLISDAGEVYAFGKDSFGEAEYGVQGT-KTVTTPQLVESLKNIFVVQAAIGNFFTAVL 270

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNG 175
           +  G V+T      G+LGH    +   P  +    E   VVQIAAG  Y+LA+       
Sbjct: 271 SREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGM 330

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG
Sbjct: 331 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWG 390

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + +L    AV V      TFV+ D G VY FG     SLG
Sbjct: 391 WGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 450

Query: 296 FPDRGVSD-----KVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGD 343
               G         VL P ++ SL+     V QIS    +Y   HT  +T+ G+LF FG 
Sbjct: 451 HNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGA 510

Query: 344 NERAQLGHDTLRGCLE 359
            ++ QLG + +    E
Sbjct: 511 GDKGQLGMELVNNQTE 526


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 174/353 (49%), Gaps = 10/353 (2%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H++ L+S   V S G    G LGHG    +    T ++      +  V+   
Sbjct: 17  LALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFP-TIVSALDDCEISSVTCGA 75

Query: 60  NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H   +  S + V++ G       GH +++  +F P+ ++ALKG+  KQ+  G +    +
Sbjct: 76  DHTTALSNSTKTVYSWGWGDFGRLGHGNSS-DLFIPQPIKALKGLEVKQIACGDSHCLAI 134

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G N +GQLG G T D  TP  +   E V +V  +AAG  +  AVT NG +Y
Sbjct: 135 TTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGV-AVKMLAAGAEHTTAVTENGKLY 193

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G++ D L P  +      G  +  V+ G  H + +  SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYTFGWSK 251

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  +P  + +LKS     +    R TF L   G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGC-- 309

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            G ++    P+++  L+   V+ +  G  HT+ +TDRG ++ +G     QLGH
Sbjct: 310 -GNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGH 361



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 8/301 (2%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V+ +SA  +H+  +L    V + G       GH D     F P +V AL       VT 
Sbjct: 15  QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSVTC 73

Query: 111 GLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           G + T  L+     V++ G    G+LGHG++ D   P+ I  L+ +  V QIA G S+ L
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGL-EVKQIACGDSHCL 132

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A+T +G V  +G   N  LG G   D L P  +  F  +G+ V  ++AG EH  A+  +G
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAF--EGVAVKMLAAGAEHTTAVTENG 190

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            +Y WG G  G LG GD  D+ +P+ ++++   L   V    R T  + ++G++Y FGW 
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWS 250

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            +G LG  D   +D ++ P  + +L++  +  I+ G  HT  +   GRL+G+G N+  Q+
Sbjct: 251 KYGQLGHGD--FADHLI-PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQV 307

Query: 350 G 350
           G
Sbjct: 308 G 308



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 144/314 (45%), Gaps = 9/314 (2%)

Query: 3   ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +T G  HT  +SNS+  V+S G    G LGHG  +   +    I       V Q++  ++
Sbjct: 71  VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIP-QPIKALKGLEVKQIACGDS 129

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +   G+V   G N +   G   T   +  P  + A +GV  K + AG   T  +T 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHT-EDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE 188

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 179
            G ++  G   +G LG GD  DR  P  +A +   G +++ +A G  + + V  +G +Y+
Sbjct: 189 NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYT 246

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           FG      LGHG+  D L P  +Q  + K I  +  + G  H  ALDS G +Y WG    
Sbjct: 247 FGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAI--TGGWRHTFALDSDGRLYGWGWNKF 304

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G +G G+  D++ P+ +  L+  +   V    R T  + D G+VY +G    G LG  D 
Sbjct: 305 GQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDT 364

Query: 300 GVSDKVLRPRILDS 313
                  R  IL S
Sbjct: 365 VDRSTPKRIEILSS 378



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 7/241 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYSFGS 182
           V + G    GQLGHGD  +R  P  ++ L++   +  +  G  +  A++ +   VYS+G 
Sbjct: 35  VCSWGRGEDGQLGHGDAEERHFPTIVSALDDC-EISSVTCGADHTTALSNSTKTVYSWGW 93

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G    LGHG   D   P+ I+    KG+ V +++ GD H +A+ + G V  WG+   G L
Sbjct: 94  GDFGRLGHGNSSDLFIPQPIKAL--KGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQL 151

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G G   D   P  L++ +      + A    T  + + G +YG+GW  +G+LG  DR   
Sbjct: 152 GLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDR--- 208

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           +  L P  + ++    +  ++ G  HT+ V + G ++ FG ++  QLGH      L P +
Sbjct: 209 EDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQ 268

Query: 363 I 363
           +
Sbjct: 269 V 269



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+ ++AG S+ +A+    +V S+G G +  LGHG+  +   P  +         +  V+ 
Sbjct: 16  VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSAL--DDCEISSVTC 73

Query: 218 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G +H  AL +S+  VY+WG G  G LGHG+  D  +P+P+ +LK     Q+         
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLA 133

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V G+G    G LG    G ++ VL P  L +     V  ++ G  HT  VT+ G
Sbjct: 134 ITTDGEVLGWGRNQNGQLGL---GHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENG 190

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +L+G+G      LG       L P ++
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQV 217



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 6/217 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ N  ++  G    G LG G    + V   ++   +   +  V+    H
Sbjct: 176 LAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVP-DQVAAVAGELMKMVACGWRH 234

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V +SG ++T G +     GH D    +  P  V+ALK    + +T G   T  L   
Sbjct: 235 TICVAESGNMYTFGWSKYGQLGHGDFADHLI-PHQVQALKSKKIQAITGGWRHTFALDSD 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G G+T D+ +P+ +  L+ +V +VVQ   G  + LA+T  G VYS+
Sbjct: 294 GRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQ--CGWRHTLAMTDRGNVYSW 351

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           G G++  LGHG+  D   P+ I+     G    ++ +
Sbjct: 352 GRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIES 388



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ ++ S ++++ G S  G LGHG      +   ++    +  +  ++    H
Sbjct: 228 VACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPH-QVQALKSKKIQAITGGWRH 286

Query: 62  AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +   G+++  G N      CG+ +       P+LV+ L+      V  G   T  +T
Sbjct: 287 TFALDSDGRLYGWGWNKFGQVGCGNTEDQSS---PQLVKGLQDQVVTVVQCGWRHTLAMT 343

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI-AAGPSYMLAVTGNGV 176
            RG+V++ G  T GQLGHGDT+DR TPK I  L   G +  QI ++G S   + T N +
Sbjct: 344 DRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIESSGSSNCTSKTSNWI 402


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 173/354 (48%), Gaps = 11/354 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   
Sbjct: 8   LLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRI-IGALNDCEISLVACGA 66

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLGHGNSS-DLFVPHPIKALQGLEIRQIACGDSHCLAV 125

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT +G +Y
Sbjct: 126 TADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDSGKLY 184

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G   
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSK 242

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD 302

Query: 299 RGVSDKVLRPRILDSLRAHH-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
               D    P+++     H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 ---VDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDC-EISLVACGADH 68

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D+G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V   G+V++ G N +   G  DT+  +  P  + A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGAEHTAAVTD 179

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 241 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 5/261 (1%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V  SG+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P+ I +   +   VV+VS G  H VA+     VY+WG+G  G
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSG 349

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LGHGD +D++ P+ + +L +
Sbjct: 350 QLGHGDAVDRSAPKGIQALSA 370



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  +++S  ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 270
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGA 66

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 13/181 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 116
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +T + +V++ G  T GQLGHGD +DR  PK I  L   GS  +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGSACE-GLEKSPEPAVTGSGV 391

Query: 177 V 177
            
Sbjct: 392 A 392


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 190/386 (49%), Gaps = 27/386 (6%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 149 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 207

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 266

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 176
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 267 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 326

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG
Sbjct: 327 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWG 386

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG
Sbjct: 387 WGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLG 446

Query: 296 F---PDRGVSDK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFG 342
               PD G  ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG
Sbjct: 447 HNNGPD-GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFG 505

Query: 343 DNERAQLG-----HDTLRGCLEPTEI 363
             ++ QLG     + T RG  E  +I
Sbjct: 506 AGDKGQLGVELVANQTERGNPERVDI 531


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 184/388 (47%), Gaps = 28/388 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-NTEEEWRPRQIRSLQGIRIIQAAAGPG 207

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 266

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNG 175
           +  G V+T    + G+LGH        P  +    E   VVQIAAG  Y+LA+       
Sbjct: 267 SREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGM 326

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG
Sbjct: 327 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWG 386

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + +L +  AV V      TFV+ + G VY FG     SLG
Sbjct: 387 WGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLG 446

Query: 296 --------FPDRGVSDKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFG 340
                      +G    VL P ++ SL+     V QIS    +Y   HT  +TD G+L+ 
Sbjct: 447 HNAAAAANADGQGRHANVLSPELVTSLKEVNERVVQISLTNSIYWNAHTFALTDSGKLYA 506

Query: 341 FGDNERAQLG-----HDTLRGCLEPTEI 363
           FG  ++ QLG     + T RG  E  +I
Sbjct: 507 FGAGDKGQLGTELVNNQTERGNPERVDI 534


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 184/385 (47%), Gaps = 24/385 (6%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ + S   V+S GS+  G LGHG  T +      I       ++Q +A   
Sbjct: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTDEEWRPRPIRTLQGIRIIQAAAGAG 207

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
               V  SGQV+  G +S     +    ++ +  P++VE+LK +   Q   G  FT  L+
Sbjct: 208 RTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLS 267

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV- 176
             G V+T    + G+LGH        P  +    E   VVQIAAG  Y+L  A   +G+ 
Sbjct: 268 REGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMS 327

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS G G    LGHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG 
Sbjct: 328 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGW 387

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG 
Sbjct: 388 GRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGH 447

Query: 297 PDRGVSDK------VLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGD 343
              G  ++      VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG 
Sbjct: 448 NAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGA 507

Query: 344 NERAQLG-----HDTLRGCLEPTEI 363
            ++ QLG     + T RG  E  EI
Sbjct: 508 GDKGQLGIELVANQTERGNPERVEI 532


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 190/386 (49%), Gaps = 27/386 (6%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 141 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 199

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 200 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 258

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 176
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 259 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 318

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG
Sbjct: 319 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWG 378

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG
Sbjct: 379 WGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLG 438

Query: 296 F---PDRGVSDK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFG 342
               PD G  ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG
Sbjct: 439 HNNGPD-GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFG 497

Query: 343 DNERAQLG-----HDTLRGCLEPTEI 363
             ++ QLG     + T RG  E  +I
Sbjct: 498 AGDKGQLGVELVANQTERGNPERVDI 523


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 156/313 (49%), Gaps = 9/313 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ VSA  +H+  +L    V + G       GH DT+  +F P  + AL G     VT G
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF-PTKLSALDGQDIICVTCG 74

Query: 112 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHCLA 133

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT +  V S+G   N  LG G   D L P+ IQ F    I +  V+AG EH VA+   G 
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE--IPIKMVAAGAEHSVAITKDGN 191

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y WG G  G LG GD  D+ LPE ++     +A+  C   R T  +  +G +Y  GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGW-RHTICVSSSGGLYTNGWGK 250

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG  D    +  L PR + +L    +SQ+S G  H++ +T  G+L G+G N+  Q+G
Sbjct: 251 YGQLGHGD---FEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307

Query: 351 HDTLRGCLEPTEI 363
                 C  P ++
Sbjct: 308 VGNNFDCCSPMQV 320



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 11/351 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H++ L+S + V S G    G LGHG +T   +  T+++      ++ V+   +H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHG-DTDDRLFPTKLSALDGQDIICVTCGADH 77

Query: 62  AAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                +SG+ V++ G       GH D +  +  P  ++AL+G+  +Q+  G +    +T+
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGD-HSDLLIPHPIKALQGLMIQQIACGDSHCLAVTM 136

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              V + G N +G+LG G   D   P+ I   EE+  +  +AAG  + +A+T +G +Y +
Sbjct: 137 DSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEI-PIKMVAAGAEHSVAITKDGNLYGW 195

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG G+++D L P  +      G  +  V+ G  H + + SSG +YT G G  G
Sbjct: 196 GWGRYGNLGLGDRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYG 252

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD  D  +P  + +L      QV    R +  L  +G + G+GW  FG +G    G
Sbjct: 253 QLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGV---G 309

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +     P  ++      V  IS G  HT+ VT+R  ++ +G     QLG+
Sbjct: 310 NNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGN 360



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+ ++AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  ++ V+ 
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSAL--DGQDIICVTC 73

Query: 218 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G +H +A   SG  VY+WG G  G LGHGD  D  +P P+ +L+  +  Q+         
Sbjct: 74  GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLA 133

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +     V  +G    G LG    G ++  L P+ +       +  ++ G  H+V +T  G
Sbjct: 134 VTMDSQVLSWGRNQNGELGL---GTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDG 190

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
            L+G+G      LG       L P ++ +
Sbjct: 191 NLYGWGWGRYGNLGLGDRNDRLLPEKVTV 219



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 124/305 (40%), Gaps = 60/305 (19%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +T G  HT+  S S   V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP-IKALQGLMIQQIACGDS 129

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V    QV + G N +   G   T      P+ ++  + +P K V AG   +  +T 
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELG-LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G+++  G   +G LG GD  DR  P+ +    +   +  +A G  + + V+ +G +Y+ 
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV--DGDKMAMVACGWRHTICVSSSGGLYTN 246

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY---------- 230
           G G    LGHG+  D L PR +Q    K   + +VS G  H +AL SSG           
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDK--FISQVSGGWRHSMALTSSGQLLGWGWNKFG 304

Query: 231 ------------------------------------------VYTWGKGYCGALGHGDEI 248
                                                     VY+WG+G  G LG+G+ I
Sbjct: 305 QIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETI 364

Query: 249 DKTLP 253
           D+ +P
Sbjct: 365 DRNVP 369



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 83/175 (47%), Gaps = 8/175 (4%)

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            DE+        RR    V+ VSAG  H VAL S   V +WG+G  G LGHGD  D+  P
Sbjct: 2   EDEVMSEVAAPPRR----VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFP 57

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
             LS+L     + V      T    ++G  VY +GW  FG LG  D      +L P  + 
Sbjct: 58  TKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDH---SDLLIPHPIK 114

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           +L+   + QI+ G  H + VT   ++  +G N+  +LG  T    L P +I I E
Sbjct: 115 ALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFE 169



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H++ I+ + +++  G    G LG G    + +   ++       +  V+    H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLP-EKVTV-DGDKMAMVACGWRH 233

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  SG ++T G       GH D    +  PR V+AL      QV+ G   +  LT  
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFEDHLV-PRKVQALSDKFISQVSGGWRHSMALTSS 292

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G +   G N  GQ+G G+  D  +P  +  P ++   V  I+ G  + +AVT    VYS+
Sbjct: 293 GQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ--KVQMISCGWRHTIAVTERENVYSW 350

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LG+GE  D   P  I+ F   G
Sbjct: 351 GRGANGQLGNGETIDRNVPTIIEAFSVDG 379



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 3/159 (1%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S+S  +++ G    G LGHG      V   ++   S   + QVS    H
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP-RKVQALSDKFISQVSGGWRH 285

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +  SGQ+   G N     G    N     P  V        + ++ G   T  +T R
Sbjct: 286 SMALTSSGQLLGWGWNKFGQIG-VGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTER 344

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            +V++ G   +GQLG+G+T+DR  P  I      GS  Q
Sbjct: 345 ENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVDGSSGQ 383


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 186/385 (48%), Gaps = 24/385 (6%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           M I    +   + S  +V+S GS+  G LGHG  TT+  S  R I       ++Q +A  
Sbjct: 149 MAIAGPGHSIAVTSKGAVYSFGSNSSGQLGHG--TTEEQSPPRLIRSLQGIRIIQAAAGG 206

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
                +  +G V+  G +S     +     + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 207 GRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVL 266

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNG 175
           +  G V+T    T  +LGH    +   P+ +    E   VVQIAAG  Y+LA+       
Sbjct: 267 SREGTVYTFSWGTDSRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGM 326

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  V V+AG  H   +   G V TWG
Sbjct: 327 SVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWG 386

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  ++ P+ + +L +  AV V      TFV+ D G VY FG     SLG
Sbjct: 387 WGRYGCLGHGNEDCESSPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 446

Query: 296 ----FPDRGVSDK--VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFG 342
                P+   + +  VL+P ++ SL+  +  V QIS    +Y   HT  +T+ G+L+ FG
Sbjct: 447 HNVVLPEEEGNRQPHVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFG 506

Query: 343 DNERAQLG----HDTLRGCLEPTEI 363
             ++ QLG    + T RG  E  +I
Sbjct: 507 AGDKGQLGVELANQTERGNPELVDI 531



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 146 PKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA-- 201
           P+ +A LE   S  +  A   P Y L+++    +      + F     EQH+ ++ R   
Sbjct: 68  PQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPMTPEQHEAMKQRCGG 127

Query: 202 ----IQTFRRKGIHVVR-----VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
               +  F   G    R       AG  H +A+ S G VY++G    G LGHG   +++ 
Sbjct: 128 SWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEQSP 187

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  + SL+    +Q  A   +T ++ D G VY FG   FG   +  +G +  V  P++++
Sbjct: 188 PRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGAQG-AQVVTTPKLVE 246

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           SL+   V Q + G + T V++  G ++ F     ++LGH T    LEP
Sbjct: 247 SLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLEP 294


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 176/369 (47%), Gaps = 27/369 (7%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 57
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG---------------S 282
             G LGHGD  D  +P  L +LK     Q  A +   F L D G                
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGK 320

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +YG+GW  FG +G  D   ++    P  ++      V Q++ G  HT+ +T+   +F +G
Sbjct: 321 LYGWGWNKFGQVGVGD---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 343 DNERAQLGH 351
                QLGH
Sbjct: 378 RGTSGQLGH 386



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 27/319 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 107
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST----------------GLYHTVV 331
           W  +G LG  D    +  L P  L++L+   +SQ                   G     +
Sbjct: 259 WSKYGQLGHGD---FEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWAL 315

Query: 332 VTDRGRLFGFGDNERAQLG 350
             D G+L+G+G N+  Q+G
Sbjct: 316 AAD-GKLYGWGWNKFGQVG 333



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 98  EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 153
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 154 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 149/329 (45%), Gaps = 21/329 (6%)

Query: 3   ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 139

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 198

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 257

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFR------RKGIHVVRVSAGDEHV-------VALDS 227
           G      LGHG+  D L P  ++  +       + + ++    GDE          AL +
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G +Y WG    G +G GD  D   P  ++       VQV    R T  L +  +V+ +G
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
               G LG  +  + D+ + P+++D+L +
Sbjct: 378 RGTSGQLGHGE--IVDRNI-PKMIDALSS 403



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 25/278 (8%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 61  HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--------------- 163
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ Q  A               
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQEEAVELIFFFLGDEGFRV 307

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G     A+  +G +Y +G      +G G+  D   P  +Q        VV+V+ G  H +
Sbjct: 308 GGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTL 365

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           AL  +  V++WG+G  G LGHG+ +D+ +P+ + +L S
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSS 403



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------LNFT 115
              V  SG ++T G +     GH D    +  P  +EALK     Q  A       L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDE 303

Query: 116 GF---------LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 165
           GF         L   G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G 
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGW 361

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            + LA+T    V+S+G G++  LGHGE  D   P+ I      G
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDG 405



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 20/175 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV- 53
           +  G  HT+ +S+S S+++ G S  G LGHG       P   + +  T I+   A  ++ 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 54  --------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
                   +V      A  +   G+++  G N     G  D N     P  V        
Sbjct: 298 FFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKV 354

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
            QV  G   T  LT   +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 409


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 15/353 (4%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 71
           +++ ++F  GS++ G LG G    + +   R ++F  A  + Q++  EN+   + + GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           ++CG+N     GH    +   R +L+  L     K+V  G + T  +   G + + GSN 
Sbjct: 133 YSCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 132 HGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
            GQLG +   L    P  +  L     VVQ+A G +++LA+T NG +YS+GS S+  LG 
Sbjct: 190 EGQLGLNSKNLIECVPHMVRALG-TSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248

Query: 191 G-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           G +  +E++P+ I +    G+ +  ++ G  H +A+  SG V+ WGK   G LG  D  +
Sbjct: 249 GTDVKNEIKPKLISSL--AGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRN 306

Query: 250 KTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
           + LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + P
Sbjct: 307 RNLPRQLQTLQNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGNTSNEILP 362

Query: 309 RILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           R +  L    V+QIS G  HT+ +V  RGR++ +G     QLG++  R    P
Sbjct: 363 RQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATP 415



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 20/317 (6%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVV--QVS 56
           QI  G  +T+LI+ +  V+SCG++  G LGH  G +  Q +       P     V  +V+
Sbjct: 115 QIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLI-------PGLDAFVFKKVA 167

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
              +H   V + GQ+F+ G N+    G    N     P +V AL      QV  G+N   
Sbjct: 168 CGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 117 FLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            LT  G +++ GSN+ GQLG G D  +   PK I+ L  V  +  I  G  + +A++ +G
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGV-PIAFITCGGYHSMAISKSG 286

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+ +G  +   LG  +  +   PR +QT +     V   + G+E  V L   G V+T G
Sbjct: 287 AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNA--KVCYAACGEEFSVFLTVDGGVFTCG 344

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G  G G L
Sbjct: 345 AGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQL 404

Query: 295 GFPDRGVSDKVLRPRIL 311
           G     ++  V  P+++
Sbjct: 405 G---NNITRSVATPQVV 418



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 14/241 (5%)

Query: 128 GSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           GS  HG+LG G   D     P+ +   ++   + QIA G +Y + +T +G VYS G+   
Sbjct: 82  GSTIHGELGLGGIEDENILVPREL-DFQKATEIEQIACGENYTVLITRDGQVYSCGNNDY 140

Query: 186 FCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             LGH  G +  +L P  +  F  K     +V+ G  H +A++  G +++WG    G LG
Sbjct: 141 GQLGHEKGRKRLQLIP-GLDAFVFK-----KVACGAHHTLAVNEWGQLFSWGSNAEGQLG 194

Query: 244 -HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
            +   + + +P  + +L + + VQV         L + G +Y +G    G LG     V 
Sbjct: 195 LNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL-GTDVK 253

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           +++ +P+++ SL    ++ I+ G YH++ ++  G +FG+G N   QLG +  R    P +
Sbjct: 254 NEI-KPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQ 312

Query: 363 I 363
           +
Sbjct: 313 L 313


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 172/354 (48%), Gaps = 11/354 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   
Sbjct: 8   LLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRI-IGALNDCEISLVACGA 66

Query: 60  NHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H  A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLGHGNSS-DLFVPHPIKALQGLEIRQIACGDSHCLAV 125

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT  G +Y
Sbjct: 126 TADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDGGKLY 184

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G   
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSK 242

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD 302

Query: 299 RGVSDKVLRPRILDSLRAHH-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
               D    P+++     H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 ---VDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDC-EISLVACGADH 68

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 8/299 (2%)

Query: 3   ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V   G+V++ G N +   G  DT+  +   +L+ A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVTD 179

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 241 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 5/261 (1%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V   G+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      +G G+  D   P+ I +   +   VV+VS G  H VA+     VY+WG+G  G
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSG 349

Query: 241 ALGHGDEIDKTLPEPLSSLKS 261
            LGHGD +D++ P+ + +L +
Sbjct: 350 QLGHGDAVDRSAPKGIQALSA 370



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  +++   ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 270
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGA 66

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 116
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +T + +V++ G  T GQLGHGD +DR  PK I  L   G   +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGKACE-GLEKSPEPAVTGSGV 391

Query: 177 V 177
            
Sbjct: 392 A 392


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 183/368 (49%), Gaps = 22/368 (5%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 209

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 210 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 268

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 176
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 269 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 328

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG
Sbjct: 329 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWG 388

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG
Sbjct: 389 WGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLG 448

Query: 296 F---PDRGVSDK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFG 342
               PD G  ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG
Sbjct: 449 HNNGPD-GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFG 507

Query: 343 DNERAQLG 350
             ++ QLG
Sbjct: 508 AGDKGQLG 515



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 153/308 (49%), Gaps = 15/308 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           Q  A   H+  V   G V++ G NSS   GH  T+   +RPR + +L+G+   Q  AG  
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEE-WRPRQIRSLEGIRIIQAAAGAG 209

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            T  ++  G V+  G ++ G+  +G   T    TP+ +  L+ +  VVQ A G  +   +
Sbjct: 210 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI-FVVQAAIGNFFTAVL 268

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 228
           +  G VY+F  G++  LGH  + ++L+P  +     + I VV+++AG  +++AL    + 
Sbjct: 269 SREGRVYTFSWGNDAKLGHQTEANDLEPHPL-LGALENIPVVQIAAGYCYLLALACQPNG 327

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 285
             VY+ G G  G LGHG   D+  P  +   +  L +Q   V A      V+   G V  
Sbjct: 328 MSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQI-LNLQPMVVAAGAWHAAVVGRDGRVCT 386

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G LG    G  +    P+++++L       ++TG Y T VV+D G ++ FG  E
Sbjct: 387 WGWGRYGCLG---HGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGE 443

Query: 346 RAQLGHDT 353
            + LGH+ 
Sbjct: 444 SSSLGHNN 451



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H +A+   G VY++G    G LGHG   ++  P  + SL+    +Q  A   +T +
Sbjct: 154 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 213

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + D G VY FG   FG   +  +G +  V  P++++SL+   V Q + G + T V++  G
Sbjct: 214 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREG 272

Query: 337 RLFGFGDNERAQLGHDTLRGCLEP 360
           R++ F     A+LGH T    LEP
Sbjct: 273 RVYTFSWGNDAKLGHQTEANDLEP 296


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 164/367 (44%), Gaps = 8/367 (2%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H+L L+SN    S G    G LGHG    +       +   A+     S +E  
Sbjct: 19  VSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYS 78

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            A      +V++ G       GH D N  +F P+ + AL G    +V  G   T  +T  
Sbjct: 79  VALSQPRNEVYSWGWGDFGRLGHGDCND-VFIPQPIRALAGRNIVKVACGDTHTLAVTDT 137

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G + + G N +GQLG G T D   P+ +  L     V  IA G  + LA T  G V+++G
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQ-EVTSIACGGEHSLAATSAGDVFAWG 196

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G   D   P  +     +G+ V  V+ G  H +A D +G VYT+G    G 
Sbjct: 197 WGRYGNLGVGPPEDRHLPSQVHGL--EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD ID+ +P+ + SLK    V +    R T    D+G +Y +GW  FG LG    G 
Sbjct: 255 LGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI---GS 311

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +     P  +  L    V  +S G  HT  VT+ G +F +G     QLGH+  +    P 
Sbjct: 312 NTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPV 371

Query: 362 EIFIQEM 368
            +    M
Sbjct: 372 RLAELSM 378



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 57/304 (18%)

Query: 99  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------- 149
           A+  +    V+ G + +  L   G   + G    GQLGHGD  +R  P++I         
Sbjct: 10  AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCS 69

Query: 150 -------------APLEEVGS------------------------------VVQIAAGPS 166
                         P  EV S                              +V++A G +
Sbjct: 70  AVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDT 129

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + LAVT  G ++SFG   N  LG G   D + P+ +++ R  G  V  ++ G EH +A  
Sbjct: 130 HTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLR--GQEVTSIACGGEHSLAAT 187

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           S+G V+ WG G  G LG G   D+ LP  +  L+      V    R +    +TG+VY F
Sbjct: 188 SAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTF 247

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G LG  D    D+++ P+ ++SL+   +  I+ G  HT    D G+L+ +G N+ 
Sbjct: 248 GWSKYGQLGHGD--CIDQLV-PKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKF 304

Query: 347 AQLG 350
            QLG
Sbjct: 305 GQLG 308



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 10/262 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HTL ++++  +FS G +  G LG G  T+  +    +       V  ++   
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIACGG 180

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 117
            H+     +G VF  G       G+     P  R  P  V  L+GV    V  G   +  
Sbjct: 181 EHSLAATSAGDVFAWGWGR---YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
               G V+T G + +GQLGHGD +D+  PK++  L++   +V IA G  +  A   +G +
Sbjct: 238 ADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVLIAGGWRHTSAADDSGKL 296

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           YS+G      LG G   D   P  +Q      + ++  S G  H  A+  +G V++WG+G
Sbjct: 297 YSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL--SCGWRHTFAVTEAGDVFSWGRG 354

Query: 238 YCGALGHGDEIDKTLPEPLSSL 259
             G LGH +  D   P  L+ L
Sbjct: 355 VNGQLGHNEPKDTNAPVRLAEL 376



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 204 TFRR--KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           TFR     + V  VS G  H +AL S+G   +WG+G  G LGHGD  ++  P  +  L  
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQ 65

Query: 262 HLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                VC+    +  L      VY +GW  FG LG  D    + V  P+ + +L   ++ 
Sbjct: 66  ASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGD---CNDVFIPQPIRALAGRNIV 122

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           +++ G  HT+ VTD G LF FG N+  QLG  T    + P  +     +E T +A
Sbjct: 123 KVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIA 177


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 72
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 133 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 192 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDTKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 251 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 310 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 138/300 (46%), Gaps = 15/300 (5%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 57
           QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 65  QIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA------C 118

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  G+     
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 118 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G +++ GSN+ GQLG G DT     PK I+    +  +  IA G  + +A++ +G 
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGI-PIAFIACGGYHSIAISKSGA 237

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G V+T G 
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDGGVFTCGA 295

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 296 GMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 6   GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 243
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 244 HGDEIDKTLPE 254
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 177/352 (50%), Gaps = 13/352 (3%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   + + G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 194
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPYLVETLKSM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKSI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCL-EPTEIF 364
               V QI+ G  HTV +TD G ++ +G+ +  +LGH DT +  L +P ++ 
Sbjct: 293 LEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVL 344



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 126/245 (51%), Gaps = 7/245 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTEEGEVYTWGRG 61

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG+E   + P  + +LKS    QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  ++ LR   + QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 364 FIQEM 368
           F+  +
Sbjct: 236 FVDAL 240


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 17  SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           + F  GSS+ G LG    G +TTQ V+   +   S   V  +S  ++H   VL  G ++ 
Sbjct: 2   ATFCWGSSMEGQLGIGITGGQTTQEVA-KEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
           CG NS    G    +R  ++P  V AL+ V  K V  G + T  ++ RG V   G N  G
Sbjct: 61  CGANSK---GQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117

Query: 134 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           Q  L  GD  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G
Sbjct: 118 QCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
                   R  +    +G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K 
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            P  L +++S +   +   +  T +L   G V+ FG    G LG    G +   + PR +
Sbjct: 237 YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKV 293

Query: 312 DSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    ++Q++ G +HT+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 294 IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 175/396 (44%), Gaps = 46/396 (11%)

Query: 2   QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q+T G++HTL++  S   +++ G  + G LG   E   C +  R+  P   H    S++E
Sbjct: 303 QVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD-EARSCSNPQRVPGPWVPH----SSTE 357

Query: 60  NHAAFVLQSGQVFTC---------------GDNSSFCCGHRDTNRPIF------------ 92
            +++     G+V  C                D+       RD +  IF            
Sbjct: 358 KNSS---SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXX 414

Query: 93  --RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKS 148
                    L+ V  K V  G + T  ++ R  V   G N  GQ  L  GD  ++P P+ 
Sbjct: 415 XXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI 474

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           +  L      V++  G  + +A+T +G ++S+G  +   LG G        R  +    +
Sbjct: 475 LRHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLR 533

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K+ P  L +++S +   + 
Sbjct: 534 GVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIA 593

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
             +  T +L   G V+ FG    G LG    G +   + PR +  L    ++Q++ G +H
Sbjct: 594 CGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKVIDLMGSDITQVTCGKHH 650

Query: 329 TVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 651 TLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 182/385 (47%), Gaps = 29/385 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           Q   G  H++ + S   V+S GS+  G LGHG  TT+     R I       ++Q +A  
Sbjct: 149 QAIAGPGHSIAVTSKGIVYSFGSNSSGQLGHG--TTEEEWRPRPIRTLQGIRIIQAAAGA 206

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
                V  SGQV+  G+      G    ++ +  P++VE+LK +   Q   G  FT  L+
Sbjct: 207 GRTMLVSDSGQVYAFGEAEYGVQG----SKTVAAPQIVESLKNIFVVQAAIGNFFTAVLS 262

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV- 176
             G V+T    +  +LGH        P  +    E   VVQIAAG  Y+L  A   +G+ 
Sbjct: 263 REGRVYTFSWGSDEKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMS 322

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS G G    LGHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG 
Sbjct: 323 VYSVGCGLGGKLGHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGW 382

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG 
Sbjct: 383 GRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGH 442

Query: 297 PDRGVSD------KVLRPRILDSLRA--HHVSQIST-----GLYHTVVVTDRGRLFGFGD 343
              G  +      KVL P ++ SL+     V QIS         HT  +T+ G+L+ FG 
Sbjct: 443 NAAGNDEQGNRHAKVLDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGA 502

Query: 344 NERAQLG-----HDTLRGCLEPTEI 363
            ++ QLG     + T RG  E  EI
Sbjct: 503 GDKGQLGIELVANQTERGNPERVEI 527


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 72
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 133 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 192 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDIKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 251 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 310 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 137/300 (45%), Gaps = 15/300 (5%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 57
           QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 65  QIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA------C 118

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  G+     
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 118 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G +++ GSN+ GQLG G D      PK I+    +  +  IA G  + +A++ +G 
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGI-PIAFIACGGYHSIAISKSGA 237

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G V+T G 
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDGGVFTCGA 295

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 296 GMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 6   GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 243
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 244 HGDEIDKTLPE 254
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 185/391 (47%), Gaps = 38/391 (9%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           Q   G  H++ ++ S +V++ GS+  G LGH        P   + +   RI        +
Sbjct: 150 QAIAGPGHSIAVTTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRI--------I 201

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           Q +A       V  +G+V+  G +S     +    +R +  P++VE+LK +   Q   G 
Sbjct: 202 QAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGN 261

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAV 171
            FT  L+  G V+T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+
Sbjct: 262 FFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLAL 320

Query: 172 T---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   
Sbjct: 321 ACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKD 380

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V TWG G  G LGHG+E  +++P+ + +L S  AV V      TFV+ D G VY FG 
Sbjct: 381 GRVCTWGWGRYGCLGHGNEECESVPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGC 440

Query: 289 MGFGSLG----FPDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGR 337
               SLG             VL P ++ SL+     V Q+S    +Y   HT  +T+ G+
Sbjct: 441 GESSSLGHNTIIEGNNRHSNVLSPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGK 500

Query: 338 LFGFGDNERAQLGHDTL-----RGCLEPTEI 363
           L+ FG  ++ QLG + +     RG  E  EI
Sbjct: 501 LYAFGAGDKGQLGTELVAQQNERGAPERVEI 531



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 259 LKSHLAVQVCARKRKT---------FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           L+  +A + C R+ K+           +  +G+VY FG    G LG    G+ ++  RPR
Sbjct: 134 LRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNNSGQLG--HDGLEEE-WRPR 190

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            + SL+   + Q + G   T++V+D GR++ FG +
Sbjct: 191 PIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKD 225


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 173/353 (49%), Gaps = 11/353 (3%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   +   G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 194
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPFLVETLKGM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
               V QI+ G  HTV +TD G ++ +G+ +  +LGH+       P  + + E
Sbjct: 293 VEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLE 345



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 14/338 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  HT+++++   V++ G    G LGHG    + V    +      ++ QV+   
Sbjct: 37  VQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVP-RLVEELRGKNIRQVTCGS 95

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H A V  SG ++T G       GH  +T      P LVE LKG+  +QV  G   T  L
Sbjct: 96  YHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST--PFLVETLKGMQVRQVACGSRHTVVL 153

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGV 176
                V+T G   +G  GHGDT          P+EE+   ++VQI+A   +  A++  G 
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLP--CPVEELRGKNIVQISACGFHTAALSEFGE 211

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V++FG G    LGH  + ++   R ++     G  V +V+ G  H  A+  +G VYTWG 
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVEAL--AGKRVKQVACGGFHTAAVTETGEVYTWGG 269

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGHGD+++KT+P  + SL   L VQ+      T  L DTG VY +G    G LG 
Sbjct: 270 GEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGH 329

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            D   + KV  P+++D L    V  +++   HTV + D
Sbjct: 330 ND---TTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 7/245 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG+E   + P  + +LK     QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  ++ LR  ++ QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 364 FIQEM 368
           F++ +
Sbjct: 236 FVEAL 240


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +VF+ G    G LG G +T+     T ++      V Q++    H   +   G+VFT G 
Sbjct: 1   AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH D N   + PR+ ++L G    QVT G   T  +T  G ++T G   +G+LG
Sbjct: 60  GDDGRLGHGD-NGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 137 HGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QH 194
           HGD     TPK +  L  VG+ V QIA G  +   VT +G +Y++G   N   GHGE + 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            +  PR +++   K   V ++SA   H   +  +G ++TWG+G  G LGH  E +   P 
Sbjct: 177 HQYLPRLLESMAAK--RVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPT 234

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +  +      QV      T V+ + G +Y FG    G LG  DR      + P  +++L
Sbjct: 235 IVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDR---VNKMTPTFVEAL 291

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               VSQI+ G  H+V +T +G ++ +G+ +  +LGH   R    P  +
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+T G YHT  ++ N  +++ G  + G LGHG E        R+     A V Q++   
Sbjct: 88  LQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATP-KRVEALVGATVAQIACGS 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A V  SG ++T GD  +   GH +T    + PRL+E++      Q++A    T  +T
Sbjct: 147 RHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVY 178
             G + T G    G+LGH    +  +P  +  +  VG    Q++ G  +   V+ +G +Y
Sbjct: 207 DAGELFTWGEGKFGRLGHMSERNCHSPTIVDYM--VGKKPRQVSCGGFHTAVVSEDGRLY 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +FG G +  LGH ++ +++ P  ++     G+ V +++ G  H VAL   G VYTWG G 
Sbjct: 265 TFGGGEHGQLGHNDRVNKMTPTFVEAL--DGMFVSQITCGWSHSVALTVKGLVYTWGNGD 322

Query: 239 CGALGHGDEIDKTLPEPLS 257
            G LGHG+     +P+ + 
Sbjct: 323 HGKLGHGNGRKVAVPQAVE 341


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 165/328 (50%), Gaps = 15/328 (4%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           ++  GS++ G LG G  E  Q  +     F  A++V QV+  ENH   + +SG+VF+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     GH+       +P  VE L      +++ G N T      G +   GS++HGQLG
Sbjct: 61  NDLDQLGHKKQRT---KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 195
              T  +P PK I  L     +VQI+ G ++ LA+T NG +YS+G   +  LG G + + 
Sbjct: 118 FNGT-TQPLPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
           E QP  I++    GI +  ++ G  H  AL  SG +Y WGK   G LG  DE +K  P  
Sbjct: 176 EKQPTLIKSLL--GIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQ 233

Query: 256 LSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
           L +L+S  +    C      F+  D G V+  G   +G LG    G +   + PR +  L
Sbjct: 234 LKTLRSIRVKYIACGEDFSAFLSAD-GGVFTCGAGMYGQLG---HGSTSNEILPRKIMEL 289

Query: 315 RAHHVSQISTGLYHTV-VVTDRGRLFGF 341
               V+Q+S G  HT+ +V  RGR++ F
Sbjct: 290 MGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 11/288 (3%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+T G  HT++++ S  VFSCG++    LGH  + T+      ++F     + ++S   N
Sbjct: 38  QVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEGLDF---YRITKISCGGN 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + GQ+F  G +S    G   T +P+  P+++++L      Q++ G N +  LT 
Sbjct: 95  HTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL--PKIIKSLATFHIVQISCGKNHSLALTN 152

Query: 121 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G +++ G N  GQLG G   +    P  I  L  +  +  IA G ++  A++ +G +Y 
Sbjct: 153 NGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGI-PIAFIACGSNHSFALSKSGAIYG 211

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG  ++ ++L P  ++T R   I V  ++ G++    L + G V+T G G  
Sbjct: 212 WGKNTYGQLGLNDEENKLHPTQLKTLR--SIRVKYIACGEDFSAFLSADGGVFTCGAGMY 269

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 286
           G LGHG   ++ LP  +  L      QV   KR T  LV + G VY F
Sbjct: 270 GQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 14/244 (5%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE----VGSVVQIAAGPSYMLAVTGNGVVYS 179
           ++  GS  HG+LG G        +  AP+E       +V Q+  G ++ + +T +G V+S
Sbjct: 1   MYCWGSTVHGELGLGGI---EHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFS 57

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            G+     LGH +Q  + +      F R    + ++S G  H +A +  G ++ WG    
Sbjct: 58  CGNNDLDQLGHKKQRTKPEKVEGLDFYR----ITKISCGGNHTLAFNEWGQLFGWGSDSH 113

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG  +   + LP+ + SL +   VQ+   K  +  L + G +Y +G    G LG   R
Sbjct: 114 GQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              +K  +P ++ SL    ++ I+ G  H+  ++  G ++G+G N   QLG +     L 
Sbjct: 173 SEYEK--QPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230

Query: 360 PTEI 363
           PT++
Sbjct: 231 PTQL 234


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 182/382 (47%), Gaps = 39/382 (10%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q   G  H+++++ + +V++ GSS  G LGHG       P   + +   RI        
Sbjct: 152 IQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI-------- 203

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQV 108
           +Q +A       +  +G+V+  G +S    G  +   P    I  P++VE+L G+   Q 
Sbjct: 204 IQATAGVGRTMLISDTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQA 260

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G  FT  L+  G V+T       +LGH    +   P+ +    E   VVQIAAG  Y+
Sbjct: 261 AIGNFFTAVLSREGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYL 320

Query: 169 LAVTGNG---VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           LA+T       VYS G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +
Sbjct: 321 LALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVV 380

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              G V TWG G  G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+ 
Sbjct: 381 SEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFS 440

Query: 286 FGWMGFGSLGF---PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVV 332
            G     SLG       G +++   VLRP ++ SL  R   V QIS     T   HT  +
Sbjct: 441 CGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFAL 500

Query: 333 TDRGRLFGFGDNERAQLGHDTL 354
            D GRLF FG  ++ QLG + L
Sbjct: 501 CDSGRLFAFGAGDKGQLGTELL 522


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 183/392 (46%), Gaps = 40/392 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           Q   G  H++ +S S + ++ GS+  G LGH        P   + +   RI        +
Sbjct: 150 QAIAGPGHSIAVSTSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--------I 201

Query: 54  QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           Q +A       V  +G+V+  G +S      G++ + R +  P++VE+LK +   Q   G
Sbjct: 202 QAAAGAGRTMLVSDAGRVYAFGKDSFGEVEFGNQGS-RAVATPQMVESLKDIYIVQAAIG 260

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 170
             FT  L+  G V+T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA
Sbjct: 261 NFFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLA 319

Query: 171 VT---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +        VYS G G    LGHG + DE  PR I+ F+   I  + V+AG  H   +  
Sbjct: 320 LACQPSGMSVYSVGCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGK 379

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G V TWG G  G LGHG+E  +++P+ + +L S  AV V      TF++   G VY FG
Sbjct: 380 DGRVCTWGWGRYGCLGHGNEECESVPKVVEALSSVKAVYVATGDYTTFIVSCKGDVYSFG 439

Query: 288 WMGFGSLG----FPDRGVSDKVLRPRILDSLRAHHVSQISTGL-------YHTVVVTDRG 336
                SLG             VL P ++ SL++ +   +   L        HT  +T+ G
Sbjct: 440 CGESSSLGHNTTIEGNNRHSNVLSPELVTSLQSKNEKVVQVSLTNSVYWNAHTFALTESG 499

Query: 337 RLFGFGDNERAQLG-----HDTLRGCLEPTEI 363
           +L+ FG  ++ QLG      ++ RG  E  EI
Sbjct: 500 KLYAFGAGDKGQLGSELVSQESERGTPERVEI 531


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 182/382 (47%), Gaps = 39/382 (10%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q   G  H+++++ + +V++ GSS  G LGHG       P   + +   RI        
Sbjct: 121 IQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI-------- 172

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQV 108
           +Q +A       +  +G+V+  G +S    G  +   P    I  P++VE+L G+   Q 
Sbjct: 173 IQATAGVGRTMLISDTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQA 229

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G  FT  L+  G V+T       +LGH    +   P+ +    E   VVQIAAG  Y+
Sbjct: 230 AIGNFFTAVLSREGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYL 289

Query: 169 LAVTGNG---VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           LA+T       VYS G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +
Sbjct: 290 LALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVV 349

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              G V TWG G  G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+ 
Sbjct: 350 SEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFS 409

Query: 286 FGWMGFGSLGF---PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVV 332
            G     SLG       G +++   VLRP ++ SL  R   V QIS     T   HT  +
Sbjct: 410 CGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFAL 469

Query: 333 TDRGRLFGFGDNERAQLGHDTL 354
            D GRLF FG  ++ QLG + L
Sbjct: 470 CDSGRLFAFGAGDKGQLGTELL 491


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           VEAL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 357 VEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLE 416

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 473

Query: 214 RVSAGDEHVVALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVE 533

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 31/244 (12%)

Query: 138 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLLPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLP 253
             QP+ ++      I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 351 VPQPKLVEALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP 408

Query: 254 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPR 462

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 357
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTR 522

Query: 358 LEPT 361
           L PT
Sbjct: 523 LVPT 526



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 480

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D +  +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVASLVEPNFCQV 539

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           S F    G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LG
Sbjct: 287 SRFGNSSGAKMDCLLPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLG 344

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 300
           HG + D   P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 345 HGVDCDVPQPKLVEAL-AHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNE- 402

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VS  + + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 403 VSHWMPK-RLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVP 461

Query: 361 TEI 363
            E+
Sbjct: 462 REV 464



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 55
           +++  G   T   S+  +F+ G    G LGHG + T+ V     S    NF       QV
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNF------CQV 539

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNF 114
           +        +  SG V+T G +     G+   +  +  P  VE  L     ++++ G   
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV--PARVEGKLHKNFVEEISCGAYH 597

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              LT R  V+T G   +G+LGHGDT DR +P  +  L++   V  +  G ++  A+
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-KQVRSVVCGINFTAAI 653



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 121 RGHV 124
              V
Sbjct: 656 HKWV 659


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 176/379 (46%), Gaps = 31/379 (8%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSA 57
           ++  G  H+++IS N  V+S G++  G LG G    +   C+    I       + Q + 
Sbjct: 149 RVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCI----IRSLQGIRITQAAV 204

Query: 58  SENHAAFVLQSGQVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
                  V  +G V+  G DN        D +  I  P++VE+LKGV   Q   G  F+ 
Sbjct: 205 GSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSA 264

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGN 174
            L+  G V+T       +LGH        P+ ++ LE+V  V  I+AG  Y  MLA   N
Sbjct: 265 VLSREGRVYTFSWGKEERLGHSSDPSDVEPRLLSGLEDV-PVAYISAGNCYLLMLAYQPN 323

Query: 175 GV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           G+ VYS G G    LGHG + ++  P+ I+ F+      V ++AG  H  AL + G V T
Sbjct: 324 GMSVYSVGCGLGGKLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCT 383

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G+ G LGHGDE  K +P  +  L+   AV +   +  TFV+ + G VY FG     S
Sbjct: 384 WGWGHTGCLGHGDEEYKAVPTLVEGLRDVKAVHLSTGEYTTFVVAENGDVYSFG--SGES 441

Query: 294 LGFPDRGVSDK---VLRPRILDSLRA--HHVSQIS-----------TGLYHTVVVTDRGR 337
           L F +   +++      P I+ SL+A    V QIS            G  HT  V D G 
Sbjct: 442 LVFQEDDEAEEGPDFSTPSIVSSLKALNKKVVQISPTNASYWLNSEMGHPHTFAVMDSGD 501

Query: 338 LFGFGDNERAQLGHDTLRG 356
           L  FG   R QLG   L G
Sbjct: 502 LCAFGGGIRGQLGVKLLEG 520



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 146 PKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           PK +A LE   +     A   P++ L++            + F L   E  + L+ R   
Sbjct: 72  PKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQKRTMFKLMKQEDQECLKQRCGG 131

Query: 204 TFRRKGIHVV-------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           +++    +++       RV AG  H + + S+G VY++G    G LG GD  D+  P  +
Sbjct: 132 SWKHVLKYILVREKNGSRVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCII 191

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLR 315
            SL+     Q     R T ++ DTGSVY FG   F G+    D  +  ++  P+I++SL+
Sbjct: 192 RSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHI--QITTPKIVESLK 249

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              V Q + G Y + V++  GR++ F   +  +LGH +    +EP
Sbjct: 250 GVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDVEP 294


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 145/284 (51%), Gaps = 9/284 (3%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +V++ G       GH D  +   +PRLV A  G   +QV+ G   T  L   G V T G 
Sbjct: 7   EVYSWGQGVLGQLGHGD-EKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65

Query: 130 NTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
              GQLG G   T +  TP  ++ L+    V Q+A G  +  A+  NG +Y++GSG    
Sbjct: 66  GNFGQLGQGASVTANVSTPALVSALQGK-HVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGHG++  +  P+ +++ + K   V  V+AG  H   +   G + TWG GY G LGHGDE
Sbjct: 125 LGHGDEVRQASPKLVESLQGK--EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDE 182

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            D+  P+ +  ++  +A +V      T +L  +  V+ +G   FG LG  D    +K   
Sbjct: 183 TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDE---EKHAE 239

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           P ++ +L+   V  ISTG +H+  +T  G L+ +G  ++ QLGH
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 59
           Q++ G  HT +L+ N  VF+ G    G LG G   T  VS    ++     HV QV+   
Sbjct: 43  QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGW 102

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H   ++ +GQ++T G       GH D  R    P+LVE+L+G     V AG   +  + 
Sbjct: 103 HHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGFHSSVII 161

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G++ T G    GQLGHGD  DR TPK +  +++     ++A G  + L +T +  V++
Sbjct: 162 EGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQC-IAHEVACGTHHTLMLTQSQEVWT 220

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GSG    LG G++    +P  I     +G+ V+ +S G  H  AL S G +YTWG G  
Sbjct: 221 WGSGEFGKLGIGDEEKHAEPIMITAL--QGVGVIHISTGGFHSAALTSEGVLYTWGGGDK 278

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           G LGHGDE  + +P  +  +   +++ V
Sbjct: 279 GQLGHGDENSQNIPVVVEVISCDMSILV 306



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 15/290 (5%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           S V+S G  + G LGHG E TQ      V+F   N      V QVS    H A ++++G+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFN------VRQVSCGNQHTAILMENGE 59

Query: 71  VFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           VFT G  +    G        +  P LV AL+G   KQV  G + T  L   G ++T GS
Sbjct: 60  VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
             +G+LGHGD + + +PK +  L+    V  +AAG  +   +   G + ++G G    LG
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGK-EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           HG++ D   P+ ++  ++   H   V+ G  H + L  S  V+TWG G  G LG GDE  
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAH--EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEK 236

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
              P  +++L+    + +      +  L   G +Y +G    G LG  D 
Sbjct: 237 HAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDE 286


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  140 bits (354), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 19/321 (5%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSS------FCCGHRDTNRPIFRPRLVEALK 101
            +A   +++         V   G+VF CGD+S       FC         +  PR +  L 
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFC-------GKVSSPRQIPGLS 2676

Query: 102  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
                K V   +G      L++ G V + G    G+LGHGD L   TPK I  L     V 
Sbjct: 2677 QFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLL-AKRVF 2735

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
             IA G ++  A+T +G +Y++G G    LGH ++  +  P+ ++ F  K I  V   + D
Sbjct: 2736 YIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRD 2795

Query: 220  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
               +ALDS G VY+WG G  G LG G       P+ +  L  H  VQ+    + +  L  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTA 2855

Query: 280  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            TG V+ +G   +  LG    G  + V RP +++ L+   +  I+ G  H + V+ +G ++
Sbjct: 2856 TGQVWTWGKGEYYRLGL---GRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVY 2912

Query: 340  GFGDNERAQLGHDTLRGCLEP 360
             +GDN+  Q G+ T     EP
Sbjct: 2913 CWGDNDHGQQGNGTTNANQEP 2933



 Score =  126 bits (317), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 11/315 (3%)

Query: 54   QVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTA 110
            QV   E     V   G+V+  G   S   G   +   N  +  P+LV+ L  +    V +
Sbjct: 3581 QVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNS 3640

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G      L+  G V+  G    G+LG G+ +    P+ +  L +   ++ IA G  +  A
Sbjct: 3641 GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD-KCIIDIACGGFHSAA 3699

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSS 228
            ++  G +Y++G G    LGHG+  D L P+ +Q       HVV+V+  +GD   + + S 
Sbjct: 3700 ISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGL--INYHVVKVACGSGDAQTMCVTSD 3757

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
              V++WG G  G LGH       LP  + SL     +Q+    + +  L   G++Y +G 
Sbjct: 3758 DNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGK 3817

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              +  LG    G S+ V +P+ +  L+   + Q STG  H + +TD G ++ +GDN+  Q
Sbjct: 3818 GDYFRLG---HGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQ 3874

Query: 349  LGHDTLRGCLEPTEI 363
            LG  T      P  I
Sbjct: 3875 LGDGTAHPIARPRPI 3889



 Score =  124 bits (310), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 12   LISNSSVFSCGSSLCGVLGHGP---ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 68
            + S   V++ G +  G LG GP   +    V+   +   +    V V++   H   +  +
Sbjct: 3592 VTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTT 3651

Query: 69   GQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
            G+V+  GD  +     G+R T+    +P+LV++L       +  G   +  ++  GH++T
Sbjct: 3652 GEVYAWGDGDDGKLGLGNRVTHS---KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYT 3708

Query: 127  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGS 184
             G   +G+LGHGD  D   PK +  L     VV++A  +G +  + VT +  V+S+G G 
Sbjct: 3709 WGKGRYGRLGHGDYEDYLYPKLVQGLINY-HVVKVACGSGDAQTMCVTSDDNVWSWGDGD 3767

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LGH        P  I++   KGI  +++  G +  VAL ++G +YTWGKG    LGH
Sbjct: 3768 YGKLGHNISESCKLPCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGH 3825

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            G       P+P+S L+    VQ          L D G VY +G    G LG    G +  
Sbjct: 3826 GSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG---DGTAHP 3882

Query: 305  VLRPRILDSLRAHHVSQISTGLYHT 329
            + RPR + +L+   + Q+S G  H+
Sbjct: 3883 IARPRPIAALKGKRIQQVSCGSAHS 3907



 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 93   RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
            RP   EAL  +   ++  G      ++  G V  CG ++ G+LG        +P+ I  L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 153  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
             + V   V + +G  + +A++ +G V S+G G +  LGHG+      P+ I +   K   
Sbjct: 2676 SQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAK--R 2733

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 269
            V  ++ G  H  A+ S G +YTWG+G  G LGH DE+ +  P+ +         QV   +
Sbjct: 2734 VFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGS 2793

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
            R  +T  L   G+VY +G   FG LG   RG SD    P+ ++ L  H V QI  G   +
Sbjct: 2794 RDAQTLALDSEGNVYSWGDGDFGKLG---RGGSDGCCTPQKVERLVGHRVVQIECGAQFS 2850

Query: 330  VVVTDRGRLFGFGDNERAQLG 350
            V +T  G+++ +G  E  +LG
Sbjct: 2851 VALTATGQVWTWGKGEYYRLG 2871



 Score =  100 bits (250), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 19/289 (6%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S +  V++ G    G LG G   T       +   S   ++ ++    H
Sbjct: 3638 VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKP-QLVQSLSDKCIIDIACGGFH 3696

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLT 119
            +A + + G ++T G       GH D    ++ P+LV+ L      +V  G     T  +T
Sbjct: 3697 SAAISRYGHLYTWGKGRYGRLGHGDYEDYLY-PKLVQGLINYHVVKVACGSGDAQTMCVT 3755

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               +V + G   +G+LGH  +     P  I  L   G ++QI  G  + +A++ NG +Y+
Sbjct: 3756 SDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKG-IIQIDCGSQFSVALSANGTLYT 3814

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G  F LGHG      +P+ +     +G  +V+ S G  HV+AL   G VY WG    
Sbjct: 3815 WGKGDYFRLGHGSSEHVRKPKPVSGL--QGKKIVQFSTGSLHVLALTDDGEVYAWGDNDE 3872

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G LG G       P P+++LK     Q           V  GS + F W
Sbjct: 3873 GQLGDGTAHPIARPRPIAALKGKRIQQ-----------VSCGSAHSFAW 3910



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            V+  G N  GQLG  +G  + RPT      ++ P+E VG       G   +  V+  G V
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVG-------GSKSLFIVSNEGKV 2647

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            +  G  S   LG         PR I    +  I  V V +G +H +AL   G V +WG G
Sbjct: 2648 FVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDG 2707

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LGHGD +    P+ + SL +     +      +  +   G +Y +G   +G LG  
Sbjct: 2708 EDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHS 2767

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D  VS     P+++      +++Q++ G     T+ +   G ++ +GD +  +LG     
Sbjct: 2768 DE-VSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSD 2824

Query: 356  GCLEPTEI 363
            GC  P ++
Sbjct: 2825 GCCTPQKV 2832



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 12/227 (5%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASEN 60
            I  G  H+  I S+  +++ G    G LGH  E +Q        F    ++ QV+  S +
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEF-VGKNITQVACGSRD 2795

Query: 61   HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
                 L S G V++ GD      G R  +     P+ VE L G    Q+  G  F+  LT
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLG-RGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALT 2854

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
              G V T G   + +LG   G+ + RPT   +  L+ V ++  IA G  + +AV+  G V
Sbjct: 2855 ATGQVWTWGKGEYYRLGLGRGEHVRRPT--LVNQLKLV-TIDHIAVGTLHCIAVSTQGDV 2911

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            Y +G   +   G+G  +   +PR +  F    I + RV  G    +A
Sbjct: 2912 YCWGDNDHGQQGNGTTNANQEPRLVTNF--NNIKINRVGCGSSQSIA 2956



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 26/254 (10%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSV 158
           +  VP K V         +T +G V++ G N  G LGHG      PTP+ I    ++  V
Sbjct: 489 MMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL-IV 547

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
           V ++ G  +  AVT +G +Y +G     SN C           P  +++      HV +V
Sbjct: 548 VMVSCGKDFCAAVTEDGKLYMWGKILHSSNCCY---------TPELVKSISE--WHVSKV 596

Query: 216 SAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           S G    + +AL   GYV+++ +      G  D+    +P  +  +  +  V +      
Sbjct: 597 SCGSSINNTLALSREGYVFSF-EYRNSDRGCDDKSLNVIPSMI--VFDYEIVSIYCHNDV 653

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             V+    +V+ +G      LG  +   S +V RP+ +  L    V+ +S    + + +T
Sbjct: 654 NAVIDCANNVFTWGRGNNNMLGHNN---SFRVNRPKEVKFLSGKQVTSLSLADDYILALT 710

Query: 334 DRGRLFGFG--DNE 345
           D G+++ +G  DNE
Sbjct: 711 DTGQVYCWGQLDNE 724



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 11/137 (8%)

Query: 220  EHVVALDSSGYVYTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            E  + +DS   VY WG   KG  G L        T  E L++LK    +++    +  F+
Sbjct: 2584 ESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALK---PIEIVGGSKSLFI 2640

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 334
            + + G V+  G    G LG P  G   KV  PR +  L    +  ++  +G  H + ++ 
Sbjct: 2641 VSNEGKVFVCGDSSGGRLGIPFCG---KVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSL 2697

Query: 335  RGRLFGFGDNERAQLGH 351
             G++  +GD E  +LGH
Sbjct: 2698 DGKVLSWGDGEDGKLGH 2714



 Score = 47.0 bits (110), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 1/121 (0%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG  + G L   D      P    SL      QV   ++  F +   G VY  G+  
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 291  FGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G LG  P    +  V+ P+++  L       +++G  H + ++  G ++ +GD +  +L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 350  G 350
            G
Sbjct: 3666 G 3666


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 15/354 (4%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 70
           L+    +F  G++  G LG G    + +    +++F  A+ + Q++  EN+   +   G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +++CG+N     GH    +   R +L+  L     K+V  G   T  +   G + + GSN
Sbjct: 87  IYSCGNNDYGQLGHERGRK---RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 131 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           + GQLG +       +P+ +  L     +VQ+A G  + LA+T NG +YS+GS S   LG
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 190 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 203 LGVDIRSEVKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 260

Query: 249 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 261 NRNLPHQLQTLRNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 316

Query: 308 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 317 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTP 370



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 13/299 (4%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 58
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +         A    +V+  
Sbjct: 70  QIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGL-----DAFVFKKVACG 124

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V + GQ+F+ G NS    G    N     PR+V+ L      QV  G+     L
Sbjct: 125 AYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALAL 184

Query: 119 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           T  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G +
Sbjct: 185 TNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV-PIAFIACGGYHSIAISKSGAI 243

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           + +G  +   LG  +  +   P  +QT R   I     + G+E  V L   G V+T G G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKI--CYAACGEEFSVFLTVDGGVFTCGAG 301

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
             G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 360



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 7/256 (2%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQV+    
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA  +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++ 
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G NT GQLG  DT +R  P  +  L     +   A G  + + +T +G V++ 
Sbjct: 240 SGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEEFSVFLTVDGGVFTC 298

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 239
           G+G    LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  
Sbjct: 299 GAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356

Query: 240 GALGHGDEIDKTLPEP 255
           G LG+     +++P P
Sbjct: 357 GQLGNNS--TRSIPTP 370



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YH++ IS S ++F  G +  G LG      + +   ++     A +   +  E  
Sbjct: 227 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPH-QLQTLRNAKICYAACGEEF 285

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 286 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 344

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           +G V+  G    GQLG+  T   PTP+ +
Sbjct: 345 QGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 136 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 315 RAHHVSQISTGLYHTVV-VTDRGRLF 339
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 148
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 207
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 264
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 265 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 12/289 (4%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V QVS 
Sbjct: 40  QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENYIVTQVSC 96

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G +    
Sbjct: 97  GLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLA 156

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV+ +G 
Sbjct: 157 LTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAVSKSGA 215

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V+T G 
Sbjct: 216 IFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGVFTCGL 273

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 284
           G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 182 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 241 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 360 PTEI 363
           PT++
Sbjct: 238 PTQL 241



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 177 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 235 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 354 LRGCLEPTEIFIQEM 368
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H L ++NS  +F+ G++  G LG G    +  + T +   +   +  ++   
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V +SG +F  G N+    G  D +   + P  ++ L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQLKTLRSLGVRYISCGDDFSVFLT 263

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
             G V TCG  T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G V
Sbjct: 264 QEGGVFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321

Query: 178 Y 178
           Y
Sbjct: 322 Y 322


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 15/354 (4%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 70
           L+    +F  G++  G LG G    + +     ++F  A+ + Q++  EN+   +   G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +++CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSN
Sbjct: 103 IYSCGNNDYGQLGHEQGRK---RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159

Query: 131 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           + GQLG +       +P+ +  L     +VQIA G  + LA+T NG +YS+GS S   LG
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQIACGMKHALALTNNGELYSWGSNSEGQLG 218

Query: 190 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 219 LGVDIRCEMKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 276

Query: 249 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 277 NRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 332

Query: 308 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 333 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTP 386



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 15/300 (5%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCV-SFTRINFPSAAHVVQVSA 57
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 86  QIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA------C 139

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H   V + GQ+F+ G NS    G    N     PR+V+ L      Q+  G+     
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 118 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G 
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV-PIAFIACGGYHSIAISKSGA 258

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++ +G  +   LG  +  +   P  +QT R     V   + G+E  V L   G V+T G 
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNA--KVCYAACGEEFSVFLTVDGGVFTCGA 316

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 317 GMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 6   GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQ++    HA  
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++  G +
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G NT GQLG  DT +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRN-AKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 243
              LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 319 YGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376

Query: 244 HGDEIDKTLPE 254
           +      T P+
Sbjct: 377 NNSTRSTTTPQ 387



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YH++ IS S ++F  G +  G LG      + + + ++     A V   +  E  
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPY-QLQTLRNAKVCYAACGEEF 301

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 302 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 360

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           +G V+  G    GQLG+  T    TP+ +
Sbjct: 361 QGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 298 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 355

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 416 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 472

Query: 214 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 473 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 589

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 590 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 425

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 543

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 601

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 218 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR--QSLSVPREVESLKGLRTVRAACGVW 479

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 163
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 308
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + T+ V  T +      +  Q++    
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHC 543

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               +  SG V+T G       G+   +  +   R+   L     ++++ G      LT 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGNPQAD-GMLPVRVEGKLHKNFVEEISCGAYHVAVLTS 602

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           R  V+T G   +G+LGHGDT DR +P  +  L++   V  +  G ++  A+
Sbjct: 603 RTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQVRTVVCGINFTAAI 652



 Score = 41.2 bits (95), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 595

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDDR-SSPTLVEALKDKQVRTVVCGINFTAAICI 654

Query: 121 RGHV 124
              V
Sbjct: 655 HKWV 658


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G++FT G+ S    GH   +  + +P+LV+AL     + V+ G
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGH-GVDSDVLQPKLVDALGNTNIELVSCG 368

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  T+  G LGHG+ +    PK I  PLE +  V  IA GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI-HVSSIACGPWHT 427

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVA 545

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R 
Sbjct: 546 LTTSGHVYTMGSPVYGQLGNPH---ADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRT 602

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 603 EVYTWGKGANGRLGH 617



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           ++ G YHT  ++ S     +  G+   G+LGHG E +  +   +IN P    HV  ++  
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP-KKINGPLEGIHVSSIACG 423

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS-VTMPREVESLKGLRTVRAACGVWHTAAV 482

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L +  +  +++ G S
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP-NFCRVSCGHS 541

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L 
Sbjct: 542 MTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKS--FVEEIACGAYHVAVLT 599

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 633



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
           +D   PK++     V  V  IA G  +   VT  G ++++G  S   LGHG   D LQP+
Sbjct: 294 MDSLLPKALESAV-VLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPK 352

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE---- 254
            +       I +  VS G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    
Sbjct: 353 LVDALGNTNIEL--VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING 410

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
           PL  +  H++   C     T V+   G ++ FG   FG LG  DRG    V  PR ++SL
Sbjct: 411 PLEGI--HVSSIACG-PWHTAVVTSAGQLFTFGDGTFGVLGHGDRG---SVTMPREVESL 464

Query: 315 RAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +     + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 465 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPT 523



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + T G  + G+LGHG   D   PK +  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  ++ G  +  AVT +G +Y++G G+ NF  LGHG +     P+ I     +GIH
Sbjct: 359 NT-NIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGIH 416

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  ++ G  H   + S+G ++T+G G  G LGHGD    T+P  + SLK    V+     
Sbjct: 417 VSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGV 476

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ETKLVPTCVAALVDPNF 533

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            ++S G   TV +T  G ++  G     QLG+
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGN 565



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 21/350 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+  L+     +F+ G    G LGHG ++   +    ++     ++  VS  E H   V
Sbjct: 317 GRHAALVTKQGEIFTWGEESGGRLGHGVDS-DVLQPKLVDALGNTNIELVSCGEYHTCAV 375

Query: 66  LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             SG ++T GD + +F   GH +        ++   L+G+    +  G   T  +T  G 
Sbjct: 376 TLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQ 435

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 172
           + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV            
Sbjct: 436 LFTFGDGTFGVLGHGDRGSVTMPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSN 494

Query: 173 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             +G ++++G G    LGHG++  +L P  +        +  RVS G    VAL +SG+V
Sbjct: 495 CSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP--NFCRVSCGHSMTVALTTSGHV 552

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           YT G    G LG+     K        L      ++        VL     VY +G    
Sbjct: 553 YTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGAN 612

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           G LG  D   +D    P ++++L+   V  I+ G   T  +     + GF
Sbjct: 613 GRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGF 659



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I  G +HT +++++  +F+ G    GVLGHG   +  V+  R +        V+ +    
Sbjct: 420 IACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVW 477

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV-PTCVAALVDPNFCRV 536

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 SCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHV 595

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 640



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 10/183 (5%)

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           GS F L    + D L P+A+++     + V  ++ G  H   +   G ++TWG+   G L
Sbjct: 287 GSCFSL----KMDSLLPKALESAVV--LDVQNIACGGRHAALVTKQGEIFTWGEESGGRL 340

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 300
           GHG + D   P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 341 GHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE- 399

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VS  + + +I   L   HVS I+ G +HT VVT  G+LF FGD     LGH        P
Sbjct: 400 VSHWIPK-KINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMP 458

Query: 361 TEI 363
            E+
Sbjct: 459 REV 461



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 7/173 (4%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + T+ V  T +      +  +VS   +
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP-TCVAALVDPNFCRVSCGHS 541

Query: 61  HAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
               +  SG V+T G       G  H D   P+   R+   L     +++  G      L
Sbjct: 542 MTVALTTSGHVYTMGSPVYGQLGNPHADGKVPV---RVEGKLSKSFVEEIACGAYHVAVL 598

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           T R  V+T G   +G+LGHGDT DR +P  +  L++   V  IA G ++  A+
Sbjct: 599 TSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-KQVKSIACGTNFTAAI 650


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 171/370 (46%), Gaps = 23/370 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G  H+++++     +S G++  G LG G +T        I    +  + Q +    
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSR 207

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               V  +G V+  G  S       D    I  P++VE+LKGV   Q   G  F+ FL+ 
Sbjct: 208 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSR 267

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV- 176
            G V+T       +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ 
Sbjct: 268 EGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMS 326

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS G G    LGHG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG 
Sbjct: 327 VYSVGCGLGGKLGHGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGW 386

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G+ G LGHGDE  + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF
Sbjct: 387 GHTGCLGHGDEEYRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGF 446

Query: 297 PDRGVSDKVLR---PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFG 340
            +   +        P +++SL+       QIST           G  HT  + + G+L+ 
Sbjct: 447 QEDEEAADDADFSTPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYA 506

Query: 341 FGDNERAQLG 350
           FG   + QLG
Sbjct: 507 FGGGIKGQLG 516



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 207

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 208 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 265

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 281
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 266 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 325

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 338
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 326 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 381

Query: 339 FGFGDNERAQLGH 351
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 208

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 209 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 266

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEP 360
             G+++        +LGH +    +EP
Sbjct: 267 REGQVYTISWGRTERLGHSSDPSDVEP 293


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  GR+HT  +  + +V++ G ++ G LG G  T +    T +  P    V  ++A   H
Sbjct: 62  VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTER---HTPVQVPGLTGVTAIAAGRRH 118

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              V Q G V+  GDN     G     D + P+  P L           + AG   T  +
Sbjct: 119 TFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG------VTAIAAGRRHTFAV 172

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N  GQLG G   +R TP  +  L     V  IAAG  + LAV  +G V+
Sbjct: 173 RQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT---GVTAIAAGDYHTLAVRQDGTVW 229

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G+ +   LG G   + L P  +         V  +SAG+ H VA+   G V+ WG   
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPGL----TGVTAISAGESHTVAVRQDGTVWAWGDNV 285

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   D+  P  +  L    A  +   +R TF +   G+V+ +G   +G LG   
Sbjct: 286 WGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGT 343

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           R  SD++   ++ D      V+ I+ G YHT+ V   G ++ +GDN   QLG  T    L
Sbjct: 344 R--SDRLTPVQVPDLT---SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRL 398

Query: 359 EPTEI 363
            P ++
Sbjct: 399 TPVQV 403



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 155/352 (44%), Gaps = 21/352 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  GR HT  +  + +V++ G +  G LG G  T +    T +  P    V  ++A + H
Sbjct: 162 IAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGVTAIAAGDYH 218

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V Q G V+  G+N+    G   T      P  V  L GV    ++AG + T  +   
Sbjct: 219 TLAVRQDGTVWAWGNNALGQLGD-GTYTERLTPVQVPGLTGVTA--ISAGESHTVAVRQD 275

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N  GQLG G   DR TP  +  L     V  IA G  +  AV  +G V+++G
Sbjct: 276 GTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLS---GVTAIAEGRRHTFAVRQDGTVWAWG 332

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG G + D L P  +         V  ++AGD H +A+   G V+ WG    G 
Sbjct: 333 LNFWGQLGDGTRSDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQ 388

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G   D+  P  +  L    A  + A +  T  +   G+V+ +G   +G LG  D   
Sbjct: 389 LGDGTYTDRLTPVQVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQLG--DGTY 444

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           +D++   ++ D      V+ I+ G YHT+ V   G +  +G N   QLG  T
Sbjct: 445 TDRLTPVQVPDLT---SVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGT 493



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 165/377 (43%), Gaps = 26/377 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHTL +  + +V++ G ++ G LG G  T +    T +  P    V  ++A E+H
Sbjct: 362 IAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPGLTGVTAIAAGESH 418

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              + Q G V+  GDN     G   + D   P+  P L           + AG   T  +
Sbjct: 419 TVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS------VTAIAAGDYHTLAV 472

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N +GQLG G +   P+P  +  L  V     +AAG S+ +AV  +G V+
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVW 532

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  LG G   D   P  I         V  ++AG  H +A    G V++WG   
Sbjct: 533 AWGLNASGQLGDGATIDRRIPVQIPGL----AGVTAIAAGSAHTLAAGQDGAVWSWGANS 588

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G    +  P  +  L    A  + A    +  L+  G+V  +G   +G LG   
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLTGVSA--MAAGDAHSVALLQDGTVSAWGRNSWGQLG--- 643

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G +   L P  +  L    V+ ++ G  HTV +   G ++ +G N+  QLG  T    L
Sbjct: 644 DGTTAARLTPVQVHGLTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRL 701

Query: 359 EPTEIFIQEMEEDTGLA 375
            P +  +Q + + T +A
Sbjct: 702 APVQ--VQGLTDVTAIA 716



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 134/320 (41%), Gaps = 17/320 (5%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           +  P    V   +A E H   V Q G  +  G+N+    G   T      P  V  L GV
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGD-GTRTDRLTPVQVPGLTGV 59

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
               V AG + T  +   G V   G N  GQLG G   +R TP  +  L     V  IAA
Sbjct: 60  TA--VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT---GVTAIAA 114

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  +  AV+ +G V+++G      LG G + D   P  +Q     G  V  ++AG  H  
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTG--VTAIAAGRRHTF 170

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           A+   G V+ WG    G LG G   ++  P  +  L    A  + A    T  +   G+V
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTV 228

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           + +G    G LG    G   + L P  +  L    V+ IS G  HTV V   G ++ +GD
Sbjct: 229 WAWGNNALGQLG---DGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGD 283

Query: 344 NERAQLGHDTLRGCLEPTEI 363
           N   QLG  T    L P ++
Sbjct: 284 NVWGQLGDGTRTDRLTPVQV 303



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ ++ + +V++ G +  G LG G    + +    +  P  A V  ++A   H
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP---VQIPGLAGVTAIAAGSAH 571

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
                Q G V++ G NS    G   T   +  P  V  L GV    + AG   +  L   
Sbjct: 572 TLAAGQDGAVWSWGANSYGQLGDGTTTHRL-SPVQVPGLTGVSA--MAAGDAHSVALLQD 628

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N+ GQLG G T  R TP  +  L     V  +AAG  + +A+  +G V+++G
Sbjct: 629 GTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT---GVTAVAAGSLHTVALRQDGTVWAWG 685

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG G     L P  +Q        V  ++AG  H VA+   G V+ WG    G 
Sbjct: 686 YNDLGQLGDGTTTRRLAPVQVQGL----TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G    ++ P  +  L    A  + A    T  +   G+V+ +G      LG    G 
Sbjct: 742 LGDGSSTARSTPVQVQELTGVSA--LAAGYAHTVAVKQDGTVWAWGNNSGTQLG---NGS 796

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           S     P  ++ L    VS ++ G +HT  V+  G  + +G N   Q+G  T      P 
Sbjct: 797 STDRYTPVWVEGLTG--VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPV 854

Query: 362 EIFIQE 367
           ++ IQE
Sbjct: 855 DVVIQE 860


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 171/370 (46%), Gaps = 23/370 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G  H+++++     +S G++  G LG G +T        I    +  + Q +    
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSR 279

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               V  +G V+  G  S       D    I  P++VE+LKGV   Q   G  F+ FL+ 
Sbjct: 280 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSR 339

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV- 176
            G V+T       +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ 
Sbjct: 340 EGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMS 398

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS G G    LGHG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG 
Sbjct: 399 VYSVGCGLGGKLGHGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGW 458

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G+ G LGHGDE  + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF
Sbjct: 459 GHTGCLGHGDEEYRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGF 518

Query: 297 PDRGVSDKVLR---PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFG 340
            +   +        P +++SL+       QIST           G  HT  + + G+L+ 
Sbjct: 519 QEDEEAADDADFSTPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYA 578

Query: 341 FGDNERAQLG 350
           FG   + QLG
Sbjct: 579 FGGGIKGQLG 588



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 279

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 280 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 337

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 281
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 338 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 397

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 338
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 398 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 453

Query: 339 FGFGDNERAQLGH 351
             +G      LGH
Sbjct: 454 CTWGWGHTGCLGH 466



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 280

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 281 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 338

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEP 360
             G+++        +LGH +    +EP
Sbjct: 339 REGQVYTISWGRTERLGHSSDPSDVEP 365


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 298 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 355

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 416 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 472

Query: 214 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 473 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 589

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 590 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 425

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 543

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 601

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 218 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR--QSLSVPREVESLKGLRTVRAACGVW 479

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 163
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 308
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + T+ V  T +      +  Q++    
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHC 543

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               +  SG V+T G       G+   +  +   R+   L     ++++ G      LT 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEGKLHKNFVEEISCGAYHVAVLTS 602

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           R  V+T G   +G+LGHGDT DR +P  +  L++   V  +  G ++  A+
Sbjct: 603 RTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQVRTVVCGINFTAAI 652



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 595

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAAICI 654

Query: 121 RGHV 124
              V
Sbjct: 655 HKWV 658


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 344 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 401

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 402 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 461

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 462 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 518

Query: 214 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 519 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 578

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 579 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 635

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 636 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 665



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 413 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 471

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 530

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 589

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 590 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 647

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 648 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 681



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 415

Query: 218 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 416 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 472

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 473 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 529

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 530 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 571



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 468 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 525

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 526 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 584

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 163
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 585 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 688



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 339 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 396

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 308
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 454

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 455 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 509



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + T+ V  T +      +  Q++    
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHC 589

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               +  SG V+T G       G+   +  +   R+   L     ++++ G      LT 
Sbjct: 590 MTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEGKLHKNFVEEISCGAYHVAVLTS 648

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           R  V+T G   +G+LGHGDT DR +P  +  L++   V  +  G ++  A+
Sbjct: 649 RTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQVRTVVCGINFTAAI 698



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 641

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 642 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAAICI 700

Query: 121 RGHV 124
              V
Sbjct: 701 HKWV 704


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              +  +T  G ++T G  TH  G LGHG+ +   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 277 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 336 GRLFGFGDNERAQLGH 351
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 21/294 (7%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F PR V +L  +  +Q+  G+     +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 152 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 208
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGG-PLE 228

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 269 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 368
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 23/281 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S     +  G+   G+LGHG   +      R+  P     V  V+  
Sbjct: 180 VACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTP-KRVGGPLEGVRVSSVACG 238

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V  +GQ+F+ GD +    GH D  +    PR VE+LKG+   +   G   T  +
Sbjct: 239 PWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLKGLKTLRAACGPWHTAAV 297

Query: 119 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                       ++ G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 298 VEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVD-HNFRQVACGHS 356

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G +Y+ GS S   LG  +    L P  ++  R     +  VS G  HV AL 
Sbjct: 357 LTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR---TLIEEVSCGAYHVAALT 412

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 413 SKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 49
           +  G +HT+L++++  +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 167
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 228 SGYVYTWGKGYC 239
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            + SL S     V   +  +  +  +G +Y  G G   FG LG  +  +S    + R+  
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGN-NISHWTPK-RVGG 225

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 226 PLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 136 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 315 RAHHVSQISTGLYHTVV-VTDRGRLF 339
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 148
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 207
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 264
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 265 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 12/289 (4%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V QVS 
Sbjct: 40  QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENYIVTQVSC 96

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G +    
Sbjct: 97  GLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLA 156

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV+ +G 
Sbjct: 157 LTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAVSKSGA 215

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V+T G 
Sbjct: 216 IFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGVFTCGL 273

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 284
           G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 182 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 241 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 360 PTEI 363
           PT++
Sbjct: 238 PTQL 241



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H L ++NS  +F+ G++  G LG G    +  + T +   +   +  ++   
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V +SG +F  G N+    G  D +   + P  ++ L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQLKTLRSLGVRYISCGDDFSVFLT 263

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
             G V TCG  T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G V
Sbjct: 264 QEGGVFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321

Query: 178 Y 178
           Y
Sbjct: 322 Y 322



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 177 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 235 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 354 LRGCLEPTEIFIQEM 368
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 97
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  +  P+L+
Sbjct: 301 CLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGH-GVDCDVAHPKLI 359

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 154
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 360 DALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           +  V  I+ GP + + VT  G +++FG GS   LGHG++     P+ +++   KG+  VR
Sbjct: 420 I-HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESL--KGLRTVR 476

Query: 215 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
            + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L   
Sbjct: 477 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 536

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              QV      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +I
Sbjct: 537 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGMLPARVEGKLHKNFVEEI 593

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           S G YH  V+T R  ++ +G     +LGH
Sbjct: 594 SCGAYHVAVLTSRTEVYTWGKGANGRLGH 622



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   +++ P    HV  +S  
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KKLHGPLEGIHVSSISCG 428

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V  +GQ+FT GD S    GH D    +  P+ VE+LKG+   +   G+  T  +
Sbjct: 429 PFHTVIVTSAGQLFTFGDGSFGVLGHGD-RESLSVPKEVESLKGLRTVRAACGVWHTAAV 487

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHC 546

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 547 LTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNF-VEEISCGAYHVAVLT 604

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG+  DK  P  + +LK
Sbjct: 605 SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALK 638



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E    +  + ++ G      ++ +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 364 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHG-PLEGIH 421

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H V + S+G ++T+G G  G LGHGD    ++P+ + SLK    V+     
Sbjct: 422 VSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGV 481

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 482 WHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---ESRLVPTCVAALVEPNF 538

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 539 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGML 577



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   V+  G +YS+G  S   LGHG   D   P+ I       I +V  + 
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELV--AC 372

Query: 218 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG++I   +P+    PL  +  H++   C   
Sbjct: 373 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGI--HVSSISCG-P 429

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR   + +  P+ ++SL+     + + G++HT  
Sbjct: 430 FHTVIVTSAGQLFTFGDGSFGVLGHGDR---ESLSVPKEVESLKGLRTVRAACGVWHTAA 486

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 487 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPT 528



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G +HT++++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 425 ISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVP-KEVESLKGLRTVRAACGVWH 483

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D    +  P  V AL      QV 
Sbjct: 484 TAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV-PTCVAALVEPNFCQVA 542

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++ 
Sbjct: 543 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQA-DGMLPARVEGKLHKNFVEEISCGAYHVA 601

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 602 VLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNV 645



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G +H   +   G +Y+WG+   G LGHG + D   
Sbjct: 298 KMDCLVPKPLEFAVR--LDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAH 355

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V + +
Sbjct: 356 PKLIDAL-THMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-K 412

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HTV+VT  G+LF FGD     LGH        P E+
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEV 466



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + ++ V  T +      +  QV+    
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHC 546

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               +  SG V+T G       G+   +  +   R+   L     ++++ G      LT 
Sbjct: 547 LTVALTTSGHVYTMGSAVYGQLGNPQAD-GMLPARVEGKLHKNFVEEISCGAYHVAVLTS 605

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           R  V+T G   +G+LGHG+T D+ TP  +  L++   V  +  G ++  A+
Sbjct: 606 RTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKD-KQVRNVVCGTNFTAAI 655



 Score = 38.1 bits (87), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  V++ GS++ G LG+ P+    +            V ++S    
Sbjct: 540 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEISCGAY 598

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH +T+     P LVEALK    + V  G NFT  + I
Sbjct: 599 HVAVLTSRTEVYTWGKGANGRLGHGNTDDK-NTPTLVEALKDKQVRNVVCGTNFTAAICI 657


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 343 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 400

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 461 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 517

Query: 214 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 518 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 577

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 578 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 634

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 635 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 664



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 412 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 470

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 529

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 588

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 589 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 646

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D++ P  + SLK
Sbjct: 647 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLK 680



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 414

Query: 218 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 415 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 471

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 472 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 528

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 529 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 570



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 33/347 (9%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 364 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 417

Query: 61  HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 418 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 477

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPS 166
           T  G + T G  + G LGHGD      P+ +  L+               +VV++  G +
Sbjct: 478 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVG-N 536

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
              +   +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 537 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 594

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           +SG+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY 
Sbjct: 595 TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 653

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           +G    G LG    G +D    P +++SL+   V  +  G+  T  +
Sbjct: 654 WGKGANGRLGH---GDTDDRSSPTLVESLKDKQVRTVVCGINFTAAI 697



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 467 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 524

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 525 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 583

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 163
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 584 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           G  ++  +T    VY++G G+N  LGHG+  D   P  +++ + K +  V
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTV 687



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G + D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 338 GVKMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 395

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 308
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 453

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 454 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 508



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 2/154 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++  G   +   S+  +F+ G    G LGHG + T+ V  T +      +  Q++    
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHC 588

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               +  SG V+T G       G+   +  +   R+   L     ++++ G      LT 
Sbjct: 589 MTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEGKLHKNFVEEISCGAYHVAVLTS 647

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
           R  V+T G   +G+LGHGDT DR +P  +  L++
Sbjct: 648 RTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKD 681



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +    +V+T G  ++   GH DT+     P LVE+LK    + V  G+NFT  
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVESLKDKQVRTVVCGINFTAA 696

Query: 118 LTIRGHV 124
           + I   V
Sbjct: 697 ICIHKWV 703


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 9/348 (2%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V++ G    G LG G  + Q      +        VQ+S    H   +   G+V+T G 
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPIL-VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH D N   F PRLVE L+    +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-D 195
           HG+     TP  +  ++ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNENGHSTPSLVESIKGL-YVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGH 178

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
           +  P  +       I++ ++SA   H  AL  +G V+T+G+G  G LGH  E ++ + + 
Sbjct: 179 QYSPYCVSELVE--INIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           + +L      QV      T  + ++G V+ +G    G LG  D+   ++++  R+ +SL 
Sbjct: 237 IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK--VNQIIPTRV-ESLI 293

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ Q++ G  HTV +TD+G +F +G+ +  +LGH+      EP  I
Sbjct: 294 DKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLI 341



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 170/336 (50%), Gaps = 10/336 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  HT+++++   V++ G    G LGHG    + V     +      V QV+   
Sbjct: 37  VQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKK-VRQVTCGS 95

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A V  SG+++T G       GH + N     P LVE++KG+  +QV  G   T  L 
Sbjct: 96  YHTAAVTVSGELYTWGGGMYGKLGHGNENGH-STPSLVESIKGLYVRQVACGSRHTVVLL 154

Query: 120 IRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               V+T G   +G  GHGDT   + +P  ++ L E+ ++ QI+A   +  A++ NG V+
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI-NIKQISACGFHTAALSENGQVF 213

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +FG G    LGH  + ++   + I      G  + +V+ G  H  A+  SG+V+TWG G 
Sbjct: 214 TFGEGKFGRLGHNSERNQPVAKCIDAL--IGKRIKQVACGGFHTAAVTESGHVFTWGGGE 271

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD++++ +P  + SL     +Q+      T  L D G V+ +G    G LG  D
Sbjct: 272 HGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHND 331

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
              ++KV  P+++++  +  V  +++   HTV + +
Sbjct: 332 ---TNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 10/261 (3%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           K+V  G   T FL   G V++CG N  GQLGH      P P  +A L E   +  IA G 
Sbjct: 37  KEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAE-EHIKHIACGQ 93

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           S+ LA++  G +YS+G+G++  LGH   +H    PR I+   ++ I   ++S GD+H +A
Sbjct: 94  SHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ--QMSCGDDHCLA 151

Query: 225 LDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           L   G ++TWG+   G LG G+  I ++ P+ + SL+     QV A    +F L  +G+V
Sbjct: 152 LGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAV 211

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           +G+G    G LG  D  V +    P  +  LR H V  IS G  HT ++T  G LF FG 
Sbjct: 212 FGWGKNSAGQLGLNDEQVKET---PCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA 268

Query: 344 NERAQLGHDTLRGCLEPTEIF 364
               QLGHD+L   + P  + 
Sbjct: 269 GGSGQLGHDSLHNEINPRRVL 289



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 15/334 (4%)

Query: 22  GSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G S  G LG+G      VS      F  A  V +V+    H  F+++ GQV++CG N   
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH         P  V  L     K +  G + +  L+++G++++ G+   GQLGH  T
Sbjct: 65  QLGHSHEGT---HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA-T 120

Query: 141 LDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DEL 197
           ++  +  P+ I  L +   + Q++ G  + LA+  +G ++++G  ++  LG G     + 
Sbjct: 121 VEHYSRIPRIIKKLSQ-QKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQS 179

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
            P+ +++   +GI + +V+AG  H  AL  SG V+ WGK   G LG  DE  K  P  + 
Sbjct: 180 SPQKVKSL--EGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L++H  V +   +  T +L   G ++ FG  G G LG          + PR +  L   
Sbjct: 238 PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL---HNEINPRRVLELMGS 294

Query: 318 HVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 350
            VSQI+ G  HT+  V   G L+ FG  +  QLG
Sbjct: 295 EVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 9/297 (3%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HTL L+ +  V+SCG +  G LGH  E T       +   +  H+  ++  ++
Sbjct: 38  EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATL---AEEHIKHIACGQS 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G +++ G  +    GH         PR+++ L     +Q++ G +    L  
Sbjct: 95  HSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154

Query: 121 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G + T G NTHGQLG G+  + + +P+ +  LE +  + Q+ AG S+  A++ +G V+ 
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGI-PLAQVTAGGSHSFALSLSGAVFG 213

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S   LG  ++  +  P  ++  R     VV +S G+EH   L  +G ++T+G G  
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTH--KVVYISCGEEHTAILTKAGGLFTFGAGGS 271

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G LGH    ++  P  +  L      Q+ C RK     +  +G++Y FG    G LG
Sbjct: 272 GQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 53/254 (20%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G+ H+L +S   +++S G+   G LGH            I   S   + Q+S  ++H
Sbjct: 89  IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   GQ+FT G N+    G  +       P+ V++L+G+P  QVTAG + +  L++ 
Sbjct: 149 CLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----------------------------- 152
           G V   G N+ GQLG  D   + TP  + PL                             
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA 268

Query: 153 ---------------------EEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLG 189
                                E +GS V QIA G  + LA V  +G +Y+FG G    LG
Sbjct: 269 GGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328

Query: 190 HGEQHDELQPRAIQ 203
            G +++   P  ++
Sbjct: 329 TGHENNVKCPTVVK 342



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 234 WGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           WG    G LG+G  +   + EP +   SL + +    C  K   F++ D G VY  GW G
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMED-GQVYSCGWNG 62

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG    G       P  + +L   H+  I+ G  H++ ++ +G L+ +G     QLG
Sbjct: 63  EGQLGHSHEGT-----HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117

Query: 351 HDTLR 355
           H T+ 
Sbjct: 118 HATVE 122


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 13/353 (3%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 73
            SSV   GS   G LG G    + V+  R I       VV ++    H  FV + G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
           CG+N     GH    +P  RP L+++L      Q ++G   +  LT  G V T GSN   
Sbjct: 68  CGNNDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDN 124

Query: 134 QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           QLG G  D+     P+ +  L +   VVQ+A G ++ + +T  G +Y++GS ++  LG  
Sbjct: 125 QLGRGQVDSASTSIPRMVRGLAD-HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
            +  + +P+ +      G+ +VRV+AG +H + L  SG ++ WG    G LG GD+ D+ 
Sbjct: 184 NKTPQNEPQWVSCI--SGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            P  + +L++     +      +  L   G V+ FG   +G LG      S+  L PR +
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG---HNTSNNELLPRKV 298

Query: 312 DSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    V+QI+ G  H++  V   GR++ FG     QLG  +    + P  +
Sbjct: 299 FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  HTL +  +  V SCG++  G LGH      C     I+     +V+Q S+  
Sbjct: 47  VHIACGLQHTLFVKKDGRVLSCGNNDYGQLGH---EKPCKRPALIDSLGERNVLQASSGT 103

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +  +GQVFT G N     G    +      PR+V  L      QV  G   T  L
Sbjct: 104 KHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGL 163

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G ++T GSN HGQLG  +   +  P+ ++ +  +  +V++AAG  + L +T +G ++
Sbjct: 164 TATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGL-PIVRVAAGADHNLVLTISGALF 222

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S   LG G+  D   P  ++T R +GI    ++ GD+H +AL   G V+T+G G 
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGI--CALACGDDHSLALTRDGGVFTFGAGM 280

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LGH    ++ LP  +  L      Q+ C RK     +  +G VY FG  G G LG
Sbjct: 281 YGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLG 338



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 18/277 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           PR + +   V    +  GL  T F+   G V +CG+N +GQLGH     RP     A ++
Sbjct: 35  PREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKRP-----ALID 89

Query: 154 EVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            +G  +V+Q ++G  +   +T  G V+++GS  +  LG G Q D       +  R    H
Sbjct: 90  SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG-QVDSASTSIPRMVRGLADH 148

Query: 212 -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            VV+V+ G  H V L ++G +YTWG    G LG  ++  +  P+ +S +     V+V A 
Sbjct: 149 KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAG 208

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                VL  +G+++ +G   FG LG     DRG       P ++ +LR   +  ++ G  
Sbjct: 209 ADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGA------PTLVKTLRNQGICALACGDD 262

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           H++ +T  G +F FG     QLGH+T    L P ++F
Sbjct: 263 HSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVF 299



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 7/256 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 58
           +Q ++G  H+ +++++  VF+ GS+    LG G   +   S  R+    A H VVQV+  
Sbjct: 97  LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACG 156

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +  +GQ++T G N+    G  +   P   P+ V  + G+P  +V AG +    L
Sbjct: 157 SAHTVGLTATGQIYTWGSNNHGQLGLANKT-PQNEPQWVSCISGLPIVRVAAGADHNLVL 215

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           TI G +   G N+ GQLG GD  DR  P  +  L   G +  +A G  + LA+T +G V+
Sbjct: 216 TISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG-ICALACGDDHSLALTRDGGVF 274

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+G    LGH   ++EL PR +  F   G  V +++ G +H +A + SSG VY +G G
Sbjct: 275 TFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLG 332

Query: 238 YCGALGHGDEIDKTLP 253
             G LG G  +++  P
Sbjct: 333 GNGQLGTGSTVNRMSP 348



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 12/235 (5%)

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           ++  V   GS THGQLG G   +     P+ I     V  VV IA G  + L V  +G V
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNV-EVVHIACGLQHTLFVKKDGRV 65

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            S G+     LGH +     +P  I +   +  +V++ S+G +H   L  +G V+TWG  
Sbjct: 66  LSCGNNDYGQLGHEKPCK--RPALIDSLGER--NVLQASSGTKHSTVLTDAGQVFTWGSN 121

Query: 238 YCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               LG G  D    ++P  +  L  H  VQV      T  L  TG +Y +G    G LG
Sbjct: 122 EDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLG 181

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             ++   ++   P+ +  +    + +++ G  H +V+T  G LF +G N   QLG
Sbjct: 182 LANKTPQNE---PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG 233


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 21/315 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T+
Sbjct: 288 HAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTM 346

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G +
Sbjct: 347 TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQL 405

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+            
Sbjct: 406 FTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTQSTSSI 463

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY  
Sbjct: 464 SSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTM 523

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G    
Sbjct: 524 GSTVYGQLGNPN---ADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGAN 580

Query: 347 AQLGHDTLRGCLEPT 361
            +LGH  +     P+
Sbjct: 581 GRLGHGDIEDRKAPS 595



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 20/273 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +  +++ G      G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 392

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 393 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 451

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID-HTFHRVACGHSL 510

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 511 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLIKDC-VEEIACGAYHVAVLTS 568

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLK 601



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 150/352 (42%), Gaps = 37/352 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 54
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T ++F        
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDF-------- 333

Query: 55  VSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+  E H   V  +G+++T GD  +++   GH          R+   L+G+    V+ G 
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 393

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 394 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 452

Query: 173 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 453 EVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFH--RVACGHSL 510

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDT 280
            V L +SG VYT G    G LG+ +  D  LP  +   L      ++        VL   
Sbjct: 511 TVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSR 569

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             V+ +G    G LG  D  + D+   P ++D+L+  HV  I+ G   T  +
Sbjct: 570 NEVFTWGKGANGRLGHGD--IEDRKA-PSLVDTLKERHVKNIACGSNFTAAI 618



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 24/312 (7%)

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
            + ++ C G R     +  P+ +E+   +    +  G+     ++ +G V T G  + G+
Sbjct: 252 AEKNATCVGSRSD---VLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGR 308

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGE 192
           LGHG   D   P+ I  L    SV  +A G  +  AVT  G +Y++G G++    LGHG 
Sbjct: 309 LGHGMGKDVTGPQLIESLAAT-SVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT 367

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                 P+ I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     
Sbjct: 368 DVSHWIPKRI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFY 426

Query: 253 P---EPLSSLKS--------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           P   E LS L++        H A  V     ++   + +G ++ +G      LG  D+  
Sbjct: 427 PREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDK-- 484

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CL 358
            +  L+P  + +L  H   +++ G   TV +T  G+++  G     QLG+    G   CL
Sbjct: 485 -ESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCL 543

Query: 359 EPTEIFIQEMEE 370
              ++    +EE
Sbjct: 544 VEDKLIKDCVEE 555



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 389 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 446

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           HAA +++           SG++FT GD      GH D    + +P  V AL      +V 
Sbjct: 447 HAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL-KPTCVSALIDHTFHRVA 505

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 506 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +T    V+++G G+N  LGHG+  D   P  + T + +  HV  ++ G     A+    
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKER--HVKNIACGSNFTAAICLHK 622

Query: 230 YVYTWGKGYCGA 241
           +V    +  C A
Sbjct: 623 WVSGTEQSQCSA 634



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 177 VYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           V  FG+  N  C+G   + D L P+ +++     +H   ++ G  H   +   G V+TWG
Sbjct: 247 VAKFGAEKNATCVG--SRSDVLIPKPLESNVVLDVH--HIACGVRHAALVSRQGEVFTWG 302

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 303 EASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 361

Query: 296 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 362 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 421

Query: 355 RGCLEPTEI 363
                P E+
Sbjct: 422 ETVFYPREV 430


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVVQPRLVEAMASTTVDFVACG 339

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAIIEV 456

Query: 227 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    SSG ++TWG G    LGHGD+  +  P  + SL      ++      T  L
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGL 516

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
             +G V+  G   +G LG P    SD  L   + D      V +I+ G YH  V+T +  
Sbjct: 517 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNE 573

Query: 338 LFGFGDNERAQLGHDTLRGCLEPT 361
           +F +G     +LGH  +     PT
Sbjct: 574 VFTWGKGANGRLGHGDVEDRKSPT 597



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAI 453

Query: 119 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L E  +  +IA G S 
Sbjct: 454 IEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIE-DNFHRIACGHSL 512

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+ +   +L       F   G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKF--AGESVEEIACGAYHVAVLTS 570

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              V+TWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 571 KNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIAC 612



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 21/296 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVE 326

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 261
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 262 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
               H A  +     ++   V +G ++ +G      LG  D+   D  L P  + SL   
Sbjct: 445 CGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---DARLEPTCVPSLIED 501

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           +  +I+ G   TV +T  GR+F  G     QLG+    G   CL   +   + +EE
Sbjct: 502 NFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEE 557



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           SG++FT GD      GH D +  +  P  V +L      ++ 
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARL-EPTCVPSLIEDNFHRIA 507

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS  +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR--HVKYIACGSNYSSAICLHK 624

Query: 230 YVYTWGKGYCGA 241
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR 323

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              +  +T  G ++T G  TH  G LGHG+++   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 277 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 336 GRLFGFGDNERAQLGH 351
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 21/294 (7%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F PR V +L  +  +Q+  G+  T  +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 152 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 208
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGG-PLE 228

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 269 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 368
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 23/281 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S     +  G+   G+LGHG   +      R+  P     V  V+  
Sbjct: 180 VACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTP-KRVGGPLEGVRVSSVACG 238

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V  +GQ+F+ GD +    GH D  +    PR VE+LKG+   +   G   T  +
Sbjct: 239 PWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLKGLKTLRAACGPWHTAAV 297

Query: 119 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                       ++ G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 298 VEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVD-HNFRQVACGHS 356

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G +Y+ GS S   LG  +    L P  ++  R     +  VS G  HV AL 
Sbjct: 357 LTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR---TLIEEVSCGAYHVAALT 412

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 413 SKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAA------ 50
           +  G +HT+L++++  +FS G    GVLGHG   +  +     S   +    AA      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 51  -HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
             VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 167
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 228 SGYVYTWGKGYC 239
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + SL S     V   +  +  +  +G +Y +G  G  + G    G S     P R+   
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWG-DGTHNFGLLGHGNSISHWTPKRVGGP 226

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 227 LEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 22/306 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G+VF+ G+ S    GH   +  +  P+L+++L  +  + V  G   T  +T+
Sbjct: 315 HAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTL 373

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +   VT +G +
Sbjct: 374 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSSGQL 432

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 225
           ++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+            
Sbjct: 433 FTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVMVGNSSSSN 490

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            SSG ++TWG G  G LGHGD+  K +P  +++L      QV      T  L  +G VY 
Sbjct: 491 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 550

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T +  ++ +G   
Sbjct: 551 MGSPVYGQLGNPQ---ADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 607

Query: 346 RAQLGH 351
             +LGH
Sbjct: 608 NGRLGH 613



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 419

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  SGQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 420 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 537

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSF-VEEIACGAYHVAVLT 595

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 629



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 27/244 (11%)

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G G  LD   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D
Sbjct: 285 GFGVKLDSLLPKALESTV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD 343

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 253
            L P+ I +     I++  V+ G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 344 VLHPKLIDSL--SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 401

Query: 254 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           +    PL  +  H++   C     T V+  +G ++ FG   FG LG  DR     V  PR
Sbjct: 402 KRVNGPLEGI--HVSSISCG-PWHTAVVTSSGQLFTFGDGTFGVLGHGDR---KSVSIPR 455

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 357
            ++SL+     + + G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 456 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515

Query: 358 LEPT 361
           L PT
Sbjct: 516 LVPT 519



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 355 NI-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 412

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + SSG ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 413 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 472

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 473 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 529

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 568



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVW 473

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 532

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 533 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGRLSKSFVEEIACGAYHV 591

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 592 AVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 636



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G G + D L P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + 
Sbjct: 285 GFGVKLDSLLPKALESTVV--LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDS 342

Query: 249 DKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKV 305
           D   P+ + SL S++ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V
Sbjct: 343 DVLHPKLIDSL-SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWV 400

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 401 PK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREV 457



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 531 QVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSFVEEIACGAY 589

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+   F P LVEALK    K +  G NFT  + +
Sbjct: 590 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIACGTNFTAAICL 648

Query: 121 RGHV 124
              V
Sbjct: 649 HKWV 652


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 21/324 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+Q++    HAA V + G++FT G+ S    GH    + + +P LVEAL       V  G
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGH-GVGKNVVQPCLVEALASSTVDFVACG 402

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 403 EFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVAFVTCGPWHT 461

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++ +   PR +++    G+  V V+ G  H  A+   
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL--SGLRTVSVACGVWHTAAIVEV 519

Query: 226 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGL 579

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
             +G V+  G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  
Sbjct: 580 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNE 636

Query: 338 LFGFGDNERAQLGHDTLRGCLEPT 361
           ++ +G     +LGH  +     PT
Sbjct: 637 VYTWGKGANGRLGHGDVEDRKTPT 660



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 399 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVAFVTCG 457

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +GQ+FT GD +    GH D    I  PR VE+L G+    V  G+  T  +
Sbjct: 458 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-ISYPREVESLSGLRTVSVACGVWHTAAI 516

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  I+ L +  +  +IA G S 
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY-NFHRIACGHSL 575

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 576 TVGLTTSGRVFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 675



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 22/295 (7%)

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N S+C    D    I  P+ +E+   +   Q+  G+     +T +G + T G  + G+LG
Sbjct: 320 NVSYCSPRTD----ILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLG 375

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 194
           HG   +   P  +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 376 HGVGKNVVQPCLVEALAS-STVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDV 434

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P+ I     +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P 
Sbjct: 435 SHWIPKRI-AGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPR 493

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSD 303
            + SL     V V      T  +V+           +G ++ +G      LG  D+   D
Sbjct: 494 EVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDK---D 550

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
             L P  + +L  ++  +I+ G   TV +T  GR+F  G     QLG+    G L
Sbjct: 551 ARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL 605



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +T G +HT LI+++  +F+ G    GVLGHG    + +S+ R +   S    V V+    
Sbjct: 454 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENISYPREVESLSGLRTVSVACGVW 511

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           SG++FT GD      GH D +  +  P  + AL      ++ 
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL-EPTCISALIDYNFHRIA 570

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 571 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKLAGECVEEIACGAYHVT 629

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 630 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAI 683



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQV 267
           + V++++ G +H   +   G ++TWG+   G LGHG  + K + +P  + +L S     V
Sbjct: 342 LDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHG--VGKNVVQPCLVEALASSTVDFV 399

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 326
              +  T  +   G +Y +G  G  + G    G       P RI   L    V+ ++ G 
Sbjct: 400 ACGEFHTCAVTMAGEIYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGP 458

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 459 WHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREV 495


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH     P  RP+ + +L+      ++ G   +  LT  G V + GSN  GQL
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQL 121

Query: 136 GH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           GH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG G   
Sbjct: 122 GHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 195 DEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P
Sbjct: 181 EKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP 238

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
             L +L+S     +      +  L + G V+  G   FG LG    G     + PR +  
Sbjct: 239 TQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVPRKVFE 295

Query: 314 LRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 350
           L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 6/298 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HTL ++    +++CG++  G LGH  +T       R+       +  +S   
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGT 98

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G      LT
Sbjct: 99  AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ +G ++
Sbjct: 159 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSKSGAIF 217

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G  +   LG  + +    P  ++T R  G+    +S GD+  V L + G V+T G G 
Sbjct: 218 GWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY--ISCGDDFSVFLTNEGGVFTCGAGT 275

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
            G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGFG  G G LG
Sbjct: 276 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 154 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 272

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 273 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 330

Query: 241 ALGHG 245
            LG G
Sbjct: 331 QLGIG 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
           +  +  LGH    D L  +  Q       +++  +S G  H +AL + G V++WG    G
Sbjct: 62  NNDHGQLGH--DLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119

Query: 241 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG    
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGT- 178

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 179 -TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY 237

Query: 360 PTEI 363
           PT++
Sbjct: 238 PTQL 241



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI +G+YH L L +N  +++ GS+  G LG G  + +    T I   +   +  ++   
Sbjct: 145 VQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGG 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V +SG +F  G N+    G  D N   + P  +  L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY-PTQLRTLRSLGVRYISCGDDFSVFLT 263

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKI 321

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           Y FG G    LG G   +   P+ ++
Sbjct: 322 YGFGLGGVGQLGIGMVGNHSTPQIVR 347



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 231 VYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           +Y WG    G LG G  +E    +P  +   ++   V+V      T  L   G +Y  G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              G LG     + +K  RP+ L SL  + ++ IS G  H++ +T+ G++F +G N   Q
Sbjct: 63  NDHGQLGHDLDTLPNK--RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 120

Query: 349 LGHDTLRGCLEPTEIFIQEM 368
           LGHD   G  +PT   I+ +
Sbjct: 121 LGHDAENG-RQPTPRMIKAI 139


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 160
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 221 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 329 TVVVTDRGRLFGFGDNERAQLGH 351
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 27/344 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAA 63
           GR+  L+     ++S G    G LGHG     C         S AH  +  V+  E H  
Sbjct: 320 GRHAALVTKQGEIYSWGEESGGRLGHG---VDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 64  FVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            V  SG ++T GD +  F   GH +        R+   L+G+    ++ G   T  +T  
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--------- 172
           G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV          
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSS 495

Query: 173 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
               +G ++++G G    LGHG++     P  +        +  +V+ G    VAL +SG
Sbjct: 496 SNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP--NFCQVACGHCLTVALTTSG 553

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           +VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +G 
Sbjct: 554 HVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG    G +D    P ++++L+   V  +  G+  T  +
Sbjct: 613 GANGRLG---HGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 164
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 14/349 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +F  G    G LG G    + +S  R+  N   +++V +VS   NH AF+ + G V+TCG
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            N     G   ++     P  V A++     +VT G   T  ++ +G V   G N++GQ+
Sbjct: 61  SNEFGQLGQEKSHT---NPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 136 GHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           G G  +       PK +  L ++ SVVQIA G ++ +A+T +G ++ +G  S+  LG G+
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKM-SVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK 176

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            H  +   A       G+  + +SAG  H  AL SSG ++ WGK   G LG  D  D+ L
Sbjct: 177 THSSMSEPA-PVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPL 235

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  L SL+S     V   ++ T VL   G V+ FG    G LG      +     PR + 
Sbjct: 236 PTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG---HNSNHHEYTPRKVF 292

Query: 313 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L    V+QI+ G  HT+ +V   GR++ FG     QLG      C  P
Sbjct: 293 ELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSP 341



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 148/281 (52%), Gaps = 17/281 (6%)

Query: 91  IFRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           I  PRL+E L+     ++V+ G N T FL   G V+TCGSN  GQLG   +     P+S+
Sbjct: 22  ISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKS--HTNPESV 79

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 207
             +E   ++ ++  G ++ +AV+  G+V+++G  S   +G G +  E     +QT  +  
Sbjct: 80  HAIETF-TITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKE----KVQTIPKML 134

Query: 208 KGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHL 263
           KG+    VV+++ G  H +AL  SG+++ WG    G LG G      + P P+ SL    
Sbjct: 135 KGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVP 194

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
            + + A    +F L  +G+++G+G   +G LG  D   +D+ L P +L SLR+  V  +S
Sbjct: 195 FMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD--TTDRPL-PTLLKSLRSQGVCYVS 251

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            G  HT V+T  G +F FG     QLGH++      P ++F
Sbjct: 252 CGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVF 292



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 7/248 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 58
           ++T G+ HT+ +S+   VF+ G +  G +G G +  + V          A   VVQ++  
Sbjct: 89  KVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            NH+  +  SG +F  GDNSS   G   T+  +  P  V +L GVP   ++AG   +  L
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL 208

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +  G +   G N +GQLG  DT DRP P  +  L   G V  ++ G  +   +T +G V+
Sbjct: 209 SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVF 267

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG G++  LGH   H E  PR +  F   G  V +++ G  H +AL  SSG VYT+G+G
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRG 325

Query: 238 YCGALGHG 245
             G LG G
Sbjct: 326 GDGQLGLG 333



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 27/308 (8%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGH-----GPETTQCV-SFTRINFPSAAHVVQ 54
           +++ G  HT  L  + +V++CGS+  G LG       PE+   + +FT         + +
Sbjct: 39  EVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTNPESVHAIETFT---------ITK 89

Query: 55  VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+  + H   V   G VF  GDNS      G +   +    P++++ L  +   Q+  G 
Sbjct: 90  VTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGC 149

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           N +  LTI GH+   G N+ GQLG G T   +  P P  +  L  V  ++ I+AG ++  
Sbjct: 150 NHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAP--VLSLNGVPFML-ISAGGAHSF 206

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A++ +G ++ +G      LG  +  D   P  +++ R +G  V  VS G++H   L S G
Sbjct: 207 ALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG--VCYVSCGEKHTAVLTSDG 264

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGW 288
            V+T+G G  G LGH     +  P  +  L   +  Q+   +  T  LV  +G VY FG 
Sbjct: 265 GVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGR 324

Query: 289 MGFGSLGF 296
            G G LG 
Sbjct: 325 GGDGQLGL 332


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 97
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 98  CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 156

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 154
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 157 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 217 I-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 273

Query: 215 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 274 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 333

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 334 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQ---ADGMLPVRVEGKLHKNFVEEI 390

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           S G YH  V+T R  ++ +G     +LGH
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGANGRLGH 419



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 225

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 226 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 284

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHC 343

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 344 LTVALTTSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 401

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 402 SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALK 435



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 169

Query: 218 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 170 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGI--HVSSISCG-P 226

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T ++   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 227 WHTALVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 283

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 284 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPT 325



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 222 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 279

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 338

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQA-DGMLPVRVEGKLHKNFVEEISCGAYHV 397

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 398 AVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSV 442



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 95  KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 152

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V +  
Sbjct: 153 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-H 209

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 263



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           Q+  G   T+ ++ S  V++ GS++ G LG+    TQ      +      H   V ++S 
Sbjct: 337 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----TQADGMLPVRVEGKLHKNFVEEISC 392

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 393 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 451

Query: 118 LTIRGHV 124
           + I   V
Sbjct: 452 ICIHKWV 458


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT 340

Query: 120 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 176
           + G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G 
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQ 399

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 225
           +++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+           
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTHSSSS 457

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            SSG ++TWG G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY 
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 517

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            G   +G LG P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G   
Sbjct: 518 MGSTVYGQLGNPN---ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGA 574

Query: 346 RAQLGHDTLRGCLEPT 361
             +LGH  +     PT
Sbjct: 575 NGRLGHGDVEDRKAPT 590



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 387

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 446

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID-HTFHRVACGHSL 505

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEIACGAYHVAVLTS 563

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALK 596



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 150/352 (42%), Gaps = 37/352 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 54
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T I+F        
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDF-------- 328

Query: 55  VSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+  E H   V  +G+++T GD  +++   GH          R+   L+G+    V+ G 
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 388

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 389 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 447

Query: 173 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 448 EVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH--RVACGHSL 505

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDT 280
            V L +SG VYT G    G LG+ +  D  LP  +   L      ++        VL   
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSR 564

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             V+ +G    G LG  D  V D+   P ++D+L+  HV  I+ G   T  +
Sbjct: 565 NEVFTWGKGANGRLGHGD--VEDRKA-PTLVDALKERHVKNIACGSNFTAAI 613



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           HAA +++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +T    V+++G G+N  LGHG+  D   P  +   + +  HV  ++ G     A+    
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAICLHK 617

Query: 230 YVYTWGKGYCGA 241
           +V    +  C A
Sbjct: 618 WVSGTEQSQCSA 629



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 18/289 (6%)

Query: 83  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
           G+  +   +  P+ +E+   +    +  G+     ++ +G V T G  + G+LGHG   D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 143 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 200
              P+ I  L    S+  +A G  +  AVT  G +Y++G G++    LGHG       P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     P  + SL 
Sbjct: 371 RI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLS 429

Query: 261 SHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
               + V         +V+            G ++ +G      LG  D+   +  L+P 
Sbjct: 430 GLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDK---EPRLKPT 486

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            + +L  H   +++ G   TV +T  G+++  G     QLG+    G L
Sbjct: 487 CVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL 535



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 177 VYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           V  FG+  N  +G+ G + D L P+ +++     +H   ++ G +H   +   G V+TWG
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAALVSRQGEVFTWG 297

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 298 EASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 356

Query: 296 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 357 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 416

Query: 355 RGCLEPTEI 363
                P E+
Sbjct: 417 ETVFYPREV 425


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 160
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 221 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 329 TVVVTDRGRLFGFGDNERAQLGH 351
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 164
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 45   NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 104
             F  A  V Q++        V   G+VF CG++++   G    +  +  PR +E L    
Sbjct: 2449 EFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFM 2508

Query: 105  CKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             ++V+  +G      LTI G + + G    G+LGHG+ ++   PK I   +    V  ++
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKS-SCVRDMS 2567

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G S+  A+  +G +Y++G G    LGHG+ +  L+P+ +Q+F    +  +   + D   
Sbjct: 2568 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 2627

Query: 223  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            +AL   G V++WG G  G LG G     ++P P+  L+     +V    + +  L  +G 
Sbjct: 2628 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGL 2687

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            V+ +G   +  LG    G    V +P+I+D LR   +  ++ G  H + VTD G++F +G
Sbjct: 2688 VWTWGKGDYYRLG---HGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 2744

Query: 343  DNERAQLGHDT 353
            DN+  Q G++T
Sbjct: 2745 DNDHGQQGNNT 2755



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 6/268 (2%)

Query: 95   RLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
            +++E+L+ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  L
Sbjct: 3431 KMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEAL 3490

Query: 153  EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
               G V+ I+ G S+   +T N  +Y++G G    LGHG+  D+L P+ ++  R   +  
Sbjct: 3491 RGKG-VIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVID 3549

Query: 213  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
            V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    +
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQ 3609

Query: 273  KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             +  L  +G+VY +G   +  LG    GV D V RP+ + +L+   V  I+TG  H V  
Sbjct: 3610 FSVALTRSGAVYTWGKGDYYRLG---HGVDDHVRRPKRVAALQGKKVITIATGSLHCVAS 3666

Query: 333  TDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            TD G ++ +GDN+  QLG  T      P
Sbjct: 3667 TDTGEVYTWGDNDEGQLGDGTTNAIARP 3694



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V +   HA  +   G V++ G+      GH + N    RPR++EAL+G     ++ G 
Sbjct: 3444 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGG 3502

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
            + +  +T    ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L 
Sbjct: 3503 SHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRG-NRVIDVACGSGDAQTLC 3561

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  +++    G+ V +V  G +  VAL  SG 
Sbjct: 3562 LTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESL--IGLGVSKVECGSQFSVALTRSGA 3619

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G   
Sbjct: 3620 VYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDND 3679

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +S+++ G  HT+
Sbjct: 3680 EGQLG---DGTTNAIARPRLVTALQGKKISRVACGSAHTI 3716



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 9/255 (3%)

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           T G +F   LT  G V++ GS   G+LGHGDT  R  P  +  L     V++I+ G ++ 
Sbjct: 24  TDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAG-KQVIRISCGSTHS 81

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALD 226
            AVT  G +Y++G G+   LGHG   D+L P  +   R  G H++ V+  +GD H +A  
Sbjct: 82  AAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLR--GHHIIDVACGSGDAHTLAAA 139

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V++WG G  G LG G       P+ +  L+     +V    + +  L   GSV+ +
Sbjct: 140 DDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTW 199

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G      LG    G  D V  P+++++L   HV  +S G  H + +TD G ++ +G N++
Sbjct: 200 GKGEGFRLG---HGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQ 256

Query: 347 AQLGHDTLRGCLEPT 361
            QLG    +   EPT
Sbjct: 257 GQLGDIDCQIRPEPT 271



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 12/334 (3%)

Query: 2    QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 59
            QI  G      +S +  VF+CG S  G LG GP +       +I   S+  V +VS    
Sbjct: 2458 QIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSG 2517

Query: 60   -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              HA  +   G++F+ G+      GH +       P+L++  K    + ++ G + +  +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGV 176
               G ++T G   +G+LGHGD      PK +        V+ IA G   +  LA+T +G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS-HRVIDIACGSRDAQTLALTDDGT 2635

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+S+G G    LG G       P  ++  + +G  V +V+ G +  +AL +SG V+TWGK
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG--VCKVACGAQFSLALSTSGLVWTWGK 2693

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G    LGHG++     P+ +  L+    V V         + D+G V+ +G    G  G 
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGN 2753

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                V+    RP++++ L    +++++ G  H++
Sbjct: 2754 NTTTVNR---RPQLVNGLEGQKITRVACGSSHSI 2784



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 20/288 (6%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           T G++   L     V+S GS   G LGHG +T+     T +   +   V+++S    H+A
Sbjct: 24  TDGKHFLALTREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSA 82

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--R 121
            V   G+++T G  +    GH  +   +  P LV  L+G     V  G      L     
Sbjct: 83  AVTSEGELYTWGRGNYGRLGHGSSEDQLV-PVLVSGLRGHHIIDVACGSGDAHTLAAADD 141

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G   +G+LG G +     PKSI  L+ +G V ++  G  + LA+T +G V+++G
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLALTRDGSVWTWG 200

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G  F LGHG +     P+ ++     G HVV VS G  H +AL  +G VY WG+   G 
Sbjct: 201 KGEGFRLGHGTEDHVRHPKLVEAL--DGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQ 258

Query: 242 LGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           LG   +ID +  PEP  +L S LA        K  V +  G    F W
Sbjct: 259 LG---DIDCQIRPEP--TLVSGLA-------SKGIVGIACGPAQSFAW 294



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            G++   L ++  V+S G    G LGHG   + C     I       V+ +S   +H+A +
Sbjct: 3450 GKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGGSHSACI 3508

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
             Q+ +++T G       GH D+   +  P++VEAL+G     V   +G   T  LT    
Sbjct: 3509 TQNHELYTWGKGRYGRLGHGDSEDQLL-PKVVEALRGNRVIDVACGSGDAQTLCLTDDDC 3567

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G   +G+LG G +     P  +  L  +G V ++  G  + +A+T +G VY++G G
Sbjct: 3568 VWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG-VSKVECGSQFSVALTRSGAVYTWGKG 3626

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              + LGHG      +P+ +     +G  V+ ++ G  H VA   +G VYTWG    G LG
Sbjct: 3627 DYYRLGHGVDDHVRRPKRVAAL--QGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG 3684

Query: 244  HG 245
             G
Sbjct: 3685 DG 3686



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 6/210 (2%)

Query: 157  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 215
             V QIA G   + AV+ +G V++ G  +N  LG G     +  PR I+      +  V V
Sbjct: 2455 KVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSV 2514

Query: 216  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
             +G  H +AL   G +++WG+G  G LGHG+ ++   P+ + + KS     +      + 
Sbjct: 2515 HSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSA 2574

Query: 276  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVT 333
             ++ +G +Y +G   +G LG  D       L+P+ + S  +H V  I+ G     T+ +T
Sbjct: 2575 AILSSGELYTWGLGEYGRLGHGDNYTH---LKPKKVQSFTSHRVIDIACGSRDAQTLALT 2631

Query: 334  DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            D G ++ +GD +  +LG     GC  P  +
Sbjct: 2632 DDGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  G N  GQLG  +      P++I  L  +  V QI  G   + AVT  G VY+ G
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPV-QIVGGEQTLFAVTAEGKVYATG 3412

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G    LG G        + +++ +   +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3413 YGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGK 3472

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + +L+    + +      +  +     +Y +G   +G LG  D   
Sbjct: 3473 LGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGD--- 3529

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+  L P+++++LR + V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 3530 SEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKI 3589

Query: 360  PTEI 363
            P ++
Sbjct: 3590 PMKV 3593



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)

Query: 199 PRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
           P  ++   RK   V  V+  D +H +AL   G VY+WG G  G LGHGD   +  P  ++
Sbjct: 5   PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVT 64

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L     +++      +  +   G +Y +G   +G LG    G S+  L P ++  LR H
Sbjct: 65  GLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLG---HGSSEDQLVPVLVSGLRGH 121

Query: 318 HVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           H+  ++  +G  HT+   D G ++ +GD +  +LG     GC  P  I
Sbjct: 122 HIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSI 169



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 5   TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G  HTL  ++  +V+S G    G LG G  +  C +   I       V +V      + 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSL 188

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + G V+T G    F  GH  T   +  P+LVEAL G     V+ G      LT  G 
Sbjct: 189 ALTRDGSVWTWGKGEGFRLGH-GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+  G N  GQLG  D   RP P  ++ L   G +V IA GP+   A +  G  +S G+ 
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG-IVGIACGPAQSFAWSCAG-QWSVGTR 305

Query: 184 SNFCL 188
             FC+
Sbjct: 306 LQFCV 310



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 267
             + V +++ G + + A+   G V+  G+   G LG G    + T+P  + +L S +  +V
Sbjct: 2453 ALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKV 2512

Query: 268  CARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
                  R    L   G ++ +G    G LG  +R   D    P+++D+ ++  V  +S G
Sbjct: 2513 SVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCD---HPKLIDTFKSSCVRDMSCG 2569

Query: 326  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              H+  +   G L+ +G  E  +LGH      L+P ++
Sbjct: 2570 SSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKV 2607



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            SG +Y WG  + G LG  +     LP+ + +L S   VQ+   ++  F +   G VY   
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA-- 3410

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              G+G  G    G +D V   ++L+SL+   V +++  +G  H + ++  G ++ +G+ +
Sbjct: 3411 -TGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGD 3469

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LGH     C  P  I
Sbjct: 3470 DGKLGHGNRNSCDRPRVI 3487



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  +  V+S G    G LG G  +  C    ++       V +V      + 
Sbjct: 3554 SGDAQTLCLTDDDCVWSWGDGDYGKLGRG-GSDGCKIPMKVESLIGLGVSKVECGSQFSV 3612

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G    +  GH   +  + RP+ V AL+G     +  G       T  G 
Sbjct: 3613 ALTRSGAVYTWGKGDYYRLGH-GVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGE 3671

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +  L+    + ++A G ++ +A
Sbjct: 3672 VYTWGDNDEGQLGDGTTNAIARPRLVTALQG-KKISRVACGSAHTIA 3717



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 12   LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
            L  + +V+S G    G LG G  +  C     +       V +V+     +  +  SG V
Sbjct: 2630 LTDDGTVWSWGDGDFGKLGRG-GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688

Query: 72   FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            +T G    +  GH  DT+  + +P++V+ L+G     V  G      +T  G V   G N
Sbjct: 2689 WTWGKGDYYRLGHGNDTH--VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDN 2746

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             HGQ G+  T     P+ +  LE    + ++A G S+ +A
Sbjct: 2747 DHGQQGNNTTTVNRRPQLVNGLEG-QKITRVACGSSHSIA 2785


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 26/335 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 277 LVDTGSVYGFGWMGFGSLGFPDR-GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
             ++ +G     +LGH        PT   ++ ++E
Sbjct: 603 SEVYTWGKGANGRLGHGDQEDRNTPT--LVEALKE 635



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD-HNFRKVACGHS 542

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
               VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLS 257
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+ ++
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 258 -SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
             L+      +      T V+   G ++ FG   FG LG  DR        PR ++SL+ 
Sbjct: 411 GPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVESLKG 467

Query: 317 HHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
               + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 468 LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 211
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 16/228 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +HT +++ +  +F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 421 IACGPWHTAVVTTAGQLFTFGDGTFGVLGHN-DRQSAYSPREVESLKGLRTVRAACGVWH 479

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D  + +  P  V AL     ++V 
Sbjct: 480 TAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV-PTCVAALVDHNFRKVA 538

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT +G V T GS+  GQLG     D   P  +        V  IA G  ++ 
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGDPQA-DGKLPGMVEGRLVDAYVEDIACGAHHVA 597

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
            VT    VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 328
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +T G  ++   GH D       P LVEALK    K +  G  FT  + +
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFTAAVCL 653


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 26/335 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 277 LVDTGSVYGFGWMGFGSLGFPDR-GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
             ++ +G     +LGH        PT   ++ ++E
Sbjct: 603 SEVYTWGKGANGRLGHGDQEDRNTPT--LVEALKE 635



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD-HNFRKVACGHS 542

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
               VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS 257
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+ ++
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 258 -SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
             L+      +      T V+   G ++ FG   FG LG  DR        PR ++SL+ 
Sbjct: 411 GPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVESLKG 467

Query: 317 HHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
               + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 468 LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 211
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 16/228 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +HT +++ +  +F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 421 IACGPWHTAVVTTAGQLFTFGDGTFGVLGHN-DRQSAYSPREVESLKGLRTVRAACGVWH 479

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D  + +  P  V AL     ++V 
Sbjct: 480 TAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV-PTCVAALVDHNFRKVA 538

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT +G V T GS+  GQLG     D   P  +        V  IA G  ++ 
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGDPQA-DGKLPGMVEGRLVDAYVEDIACGAHHVA 597

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
            VT    VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 328
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462



 Score = 37.7 bits (86), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +T G  ++   GH D       P LVEALK    K +  G  FT  + +
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFTAAVCL 653


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 160
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 221 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 329 TVVVTDRGRLFGFGDNERAQLGH 351
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 164
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 160
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 221 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 329 TVVVTDRGRLFGFGDNERAQLGH 351
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 164
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 97
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 337 CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 395

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 154
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 396 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 456 I-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 512

Query: 215 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 513 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP 572

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 573 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NAQADGMLPVRVEGKLHKNFVEEI 629

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           S G YH  V+T +  ++ +G     +LGH
Sbjct: 630 SCGAYHVAVLTSKTEVYTWGKGANGRLGH 658



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 132/283 (46%), Gaps = 22/283 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KHVNGPLEGIHVSSISCG 464

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 465 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 523

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVE-PNFCQVACGHC 582

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 583 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 640

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 268
           S   VYTWGKG  G LGHGD  DK  P  + +LK   + + VC
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVC 683



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 408

Query: 218 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 271
           G+ H  A+  SG +YTWG G    G LGHG++I   +P+    PL  +  H++   C   
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGI--HVSSISCG-P 465

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T V+   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 466 WHTAVVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 522

Query: 332 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 523 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPT 564



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 334 KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 391

Query: 253 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 309
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V +  
Sbjct: 392 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-H 448

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L   HVS IS G +HT VVT  G+LF FGD     LGH        P E+
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 502



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 576 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNA----QADGMLPVRVEGKLHKNFVEEISC 631

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 632 GAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRIVVCGINFTAA 690

Query: 118 LTIRGHV 124
           + I   V
Sbjct: 691 ICIHKWV 697


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 20/277 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G N + FL   G V+TCGSNT GQLGH    ++P        E++G+     +V 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP--------EQIGALADQHIVH 89

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIA 301



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 321 GCGARGQLG 329



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CGS+  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 100

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 157/327 (48%), Gaps = 29/327 (8%)

Query: 46  FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 322 FPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDA 380

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSI-APLEEVG 156
           L     + V  G   T  +T+ G ++T G+    +G LGHG+ +    PK +  PLE + 
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGI- 439

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  +R S
Sbjct: 440 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTMRAS 497

Query: 217 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P  ++ L  H  
Sbjct: 498 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-LVEHNF 556

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
            QV      T  L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ 
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQ---ADGKLPTRVEGKLLKSFVEEIAC 613

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G YH  V+T R  ++ +G     +LGH
Sbjct: 614 GAYHVAVLTLRNEVYTWGKGANGRLGH 640



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 23/283 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+N P    HV  +S  
Sbjct: 389 VACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP-KRVNGPLEGIHVSYISCG 447

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  + +  PR VE+LKG+   + + G+  T  +
Sbjct: 448 PWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLKGLRTMRASCGVWHTAAV 506

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A +E   +  Q+A G S
Sbjct: 507 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEH--NFCQVACGHS 564

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 565 LTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKS--FVEEIACGAYHVAVLT 622

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 268
               VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 623 LRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIAC 665



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 27/250 (10%)

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D
Sbjct: 313 GLGVKIDSLFPKALES-AVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD 371

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 253
            L P+ I       I +V  + G+ H  A+  SG +YTWG G    G LGHG+++   +P
Sbjct: 372 VLHPKLIDALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP 429

Query: 254 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           +    PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR
Sbjct: 430 KRVNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPR 483

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 357
            ++SL+     + S G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 484 EVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543

Query: 358 LEPTEIFIQE 367
           L PT + + E
Sbjct: 544 LVPTCVALVE 553



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 28/296 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 383 NT-NIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 440

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    ++     
Sbjct: 441 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGV 500

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L  H+ 
Sbjct: 501 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCV-ALVEHNF 556

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
            Q++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL-PTRVEGKLLKSFVEEI 611



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        ++ S    
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVW 501

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V  ++   C QV
Sbjct: 502 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVALVEHNFC-QV 559

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  LT  GHV+  GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 560 ACGHSLTVALTTSGHVYAMGSPVYGQLGNPQA-DGKLPTRVEGKLLKSFVEEIACGAYHV 618

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +T    VY++G G+N  LGHG+  D   P  +   + K  HV  ++ G     A+
Sbjct: 619 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDK--HVKSIACGTNFTAAI 673


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 146/284 (51%), Gaps = 7/284 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            +T G YHT  +S+  ++F+ G  + G LGHG E+       R++      VV ++    
Sbjct: 63  HVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSR 121

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    TG LT 
Sbjct: 122 HTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTD 181

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYS 179
            G V+T G    G+LGHG   +  +P+ +  L  +G   VQI+ G  +   VT +G +Y+
Sbjct: 182 AGEVYTWGEGKFGRLGHGAERNCHSPRLVETL--LGKRPVQISCGGFHSAVVTADGKMYT 239

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           FG G +  LGHG++ ++++P  ++     G+ + +++ G  H VAL SS  VYTWG G  
Sbjct: 240 FGGGEHGQLGHGDKVNKVKPTLVKDL--DGVFLTQITCGWSHSVALTSSHEVYTWGNGDH 297

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           G LGHG     + P+ +  L     V V +    T  LV+  SV
Sbjct: 298 GKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 8/284 (2%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G V+T G       GH D N   + PRL  +L G     VT G   T  ++ +G++ T G
Sbjct: 26  GGVYTWGRGDDGRLGHGD-NGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWG 84

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
              +G+LGHG+     TPK +  L  + +VV IA G  +   VT  G +Y++G   N   
Sbjct: 85  GGMYGKLGHGNESGHSTPKRVDSLVGL-AVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 189 GHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           GHG+ +  +  P+ ++  R  G  VV++SA   H   L  +G VYTWG+G  G LGHG E
Sbjct: 144 GHGDTEGHQYTPKLLE--RLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAE 201

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            +   P  + +L     VQ+      + V+   G +Y FG    G LG  D+   +KV +
Sbjct: 202 RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK--VNKV-K 258

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           P ++  L    ++QI+ G  H+V +T    ++ +G+ +  +LGH
Sbjct: 259 PTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH 302



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 9/244 (3%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 180
           G V+T G    G+LGHGD   +  P+    L   G V+  +  G  +  AV+  G ++++
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LGHG +     P+ + +    G+ VV ++ G  H   + S G +YTWG    G
Sbjct: 84  GGGMYGKLGHGNESGHSTPKRVDSL--VGLAVVDIACGSRHTAIVTSRGCLYTWGDKENG 141

Query: 241 ALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
             GHGD E  +  P+ L  L     VQ+ A    T  L D G VY +G   FG LG    
Sbjct: 142 VAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG---H 198

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G       PR++++L      QIS G +H+ VVT  G+++ FG  E  QLGH      ++
Sbjct: 199 GAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVK 258

Query: 360 PTEI 363
           PT +
Sbjct: 259 PTLV 262



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 11/319 (3%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 76
           V++ G    G LGHG    + V   R+    A  V+  V+    H A V   G +FT G 
Sbjct: 28  VYTWGRGDDGRLGHGDNGWKYVP--RLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH + +     P+ V++L G+    +  G   T  +T RG ++T G   +G  G
Sbjct: 86  GMYGKLGHGNESGH-STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAG 144

Query: 137 HGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           HGDT   + TPK +  L     VVQ++A   +   +T  G VY++G G    LGHG + +
Sbjct: 145 HGDTEGHQYTPKLLERLSG-KRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN 203

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
              PR ++T    G   V++S G  H   + + G +YT+G G  G LGHGD+++K  P  
Sbjct: 204 CHSPRLVETLL--GKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTL 261

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +  L      Q+      +  L  +  VY +G    G LG    G   KV  P++++ L 
Sbjct: 262 VKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG---HGCGKKVSTPQLVEKLV 318

Query: 316 AHHVSQISTGLYHTVVVTD 334
              V  +++   HT  + +
Sbjct: 319 GQKVVCVASYNEHTACLVE 337



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T  G VY++G G +  LGHG+   +  PR   +    G  +  V+ G  H  A+ S G +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNL 80

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           +TWG G  G LGHG+E   + P+ + SL     V +    R T ++   G +Y +G    
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G  G  D         P++L+ L    V Q+S   +HT  +TD G ++ +G+ +  +LGH
Sbjct: 141 GVAGHGD--TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGH 198

Query: 352 DTLRGCLEP 360
              R C  P
Sbjct: 199 GAERNCHSP 207


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 9/294 (3%)

Query: 6   GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 125 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           H     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG 
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI 329



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 176
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 24/330 (7%)

Query: 38  CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 96
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 153
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G  GHG+ +    PK +  PLE
Sbjct: 357 IDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLE 416

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESL--KGLRTV 473

Query: 214 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVE 533

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+ GHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D  + I  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSISVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEP-NFCQVACGHC 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 31/244 (12%)

Query: 138 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLVPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLP 253
             QP+ I       I +V  + G+ H  A+  SG +YTWG G    G  GHG+E+   +P
Sbjct: 351 VPQPKLIDALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP 408

Query: 254 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSISVPR 462

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 357
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETR 522

Query: 358 LEPT 361
           L PT
Sbjct: 523 LVPT 526



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSISVPREVESLKGLRTVRAACGVW 480

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV-PTCVASLVEPNFCQV 539

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LGHG + D 
Sbjct: 294 GAKMDCLVPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDV 351

Query: 251 TLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
             P+ + +L +H+ +++ A  +  T  +  +G +Y +G  G  + G    G       P+
Sbjct: 352 PQPKLIDAL-AHMNIELVACGEYHTCAVTLSGDLYTWG-NGTFNFGLSGHGNEVSHWMPK 409

Query: 310 ILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L+  L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 410 RLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREV 464



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 55
           +++  G   +   S+  +F+ G    G LGHG + T+ V     S    NF       QV
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNF------CQV 539

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNF 114
           +        +  SG V+T G +     G+   +  +  P  VE  L     ++++ G   
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV--PARVEGKLHKNFVEEISCGAYH 597

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              LT R  V+T G   +G+LGHGDT DR +P  +  L++   V  +  G ++  A+
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-KQVRSVVCGINFTAAI 653



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 121 RGHV 124
              V
Sbjct: 656 HKWV 659


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 145/308 (47%), Gaps = 17/308 (5%)

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +G V++ G       G  DTN    RP LV+ALK     QV  G   T  L+  G V+T 
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G    G+LGHGD   +  P+ +  LE    +VQ   G  +  AVT  G +Y++G G    
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEG-QRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 246
           LGHG +     P  ++  R +G  V +++ G  H V L   G VYTWG    G +GH + 
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNA 183

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           +  + LP  L SL++    QV A    T  L   G ++ +G   FG LG    G+    +
Sbjct: 184 DGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLG---HGMERNQM 240

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-----------FGFGDNERAQLGHDTLR 355
            PR++++L    V  ++ G +H+  + D G L           + FG+ +  +LGH  +R
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 356 GCLEPTEI 363
               PT +
Sbjct: 301 KVSVPTLV 308



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 16/326 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+S G    G LG G    Q      ++   +  VVQV+    H   + + G V+T G  
Sbjct: 9   VYSWGRGEDGQLGLGDTNDQDRPVL-VDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRG 67

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
                GH D N   + PR+VEAL+G    Q T G   T  +T +G ++T G   +G+LGH
Sbjct: 68  DDGRLGHGD-NGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126

Query: 138 GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQH 194
           G+    PTP  +  L + G+ V QIA G  + + +T  G VY++G   N  +GH   + H
Sbjct: 127 GNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGH 186

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
             L PR +++ + K   V +V+A   H  AL ++G ++TWG+G  G LGHG E ++ +P 
Sbjct: 187 QYL-PRMLESLQAKT--VTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPR 243

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG--------WMGFGSLGFPDRGVSDKVL 306
            + +L       V      +  ++D+G +Y +G          G G  G    G   KV 
Sbjct: 244 MVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVS 303

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVV 332
            P ++  L   HV ++++   HT  +
Sbjct: 304 VPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V++ G    GQLG GDT D+  P  +  L+  G VVQ+A G  + + ++ +G VY+
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKG-VVQVACGSGHTVVLSEDGAVYT 63

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G +  LGHG+   +  PR ++    +G  +V+ + G  H  A+   G +YTWG G  
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEAL--EGQRIVQATCGSYHTAAVTDKGELYTWGGGMY 121

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           G LGHG+E     P  +  L+   A   Q+    R T VL D G VY +G    G +G  
Sbjct: 122 GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT 181

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           +         PR+L+SL+A  V+Q++   +HT  +T  G +F +G+ +  +LGH   R  
Sbjct: 182 N--ADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQ 239

Query: 358 LEP 360
           + P
Sbjct: 240 MVP 242



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 18/239 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET---TQCVSFTRINFPSAAHVVQVS 56
           +Q T G YHT  +++   +++ G  + G LGHG E+   T C+   +      A V Q++
Sbjct: 95  VQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCM--VKHLRDEGARVTQIA 152

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               H   +   G+V+T GD  +   GH + +   + PR++E+L+     QV A    T 
Sbjct: 153 CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTA 212

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVG--------SVVQIAAGPS 166
            LT  G + T G    G+LGHG   ++  P+ +  L  + VG        S   + +G  
Sbjct: 213 ALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGEL 272

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           Y      +G VY+FG+G +  LGHG+      P  +    +  +HVV+V++ +EH  AL
Sbjct: 273 YTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVK--MHVVKVASYNEHTAAL 329



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 22/298 (7%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G  HT+++S + +V++ G    G LGHG    + V    +       +VQ +   
Sbjct: 43  VQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRI-VEALEGQRIVQATCGS 101

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTG 116
            H A V   G+++T G       GH  ++  P   P +V+ L+  G    Q+  G   T 
Sbjct: 102 YHTAAVTDKGELYTWGGGMYGKLGHGNESGHPT--PCMVKHLRDEGARVTQIACGSRHTV 159

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            LT  G V+T G   +G +GH +    +  P+ +  L+   +V Q+AA   +  A+T  G
Sbjct: 160 VLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQ-AKTVTQVAACGFHTAALTAAG 218

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++++G G    LGHG + +++ PR ++     G  V  V+ G  H  A+  SG +YTWG
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVEAL--MGKRVGHVACGGFHSAAILDSGELYTWG 276

Query: 236 -----------KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
                       G  G LGHGD    ++P  ++ L     V+V +    T  L    S
Sbjct: 277 GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASS 334


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 33/367 (8%)

Query: 1   MQITTGRY-HTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G Y  T+L S+ +V++ G +  G LG+G E      F +++      VV + +  
Sbjct: 37  VSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSY-FGKVD--ELYDVVSLDSDM 93

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H   + + G V+  G NS       +  + I RP  +  LK +   QV+ GL  +  L 
Sbjct: 94  DHTLAITKHGTVWGWGYNSKGEI--TEGGKNIARPVQINGLKDIV--QVSTGLVHSLALD 149

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G N +GQLG+G   D   P  +   E + ++V I AG  + LA++ +G V++
Sbjct: 150 QSGAVWSWGENIYGQLGNGTNQDSSIPTKV---EFLSNIVAIEAGAEHSLALSNDGKVWA 206

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG+GE      PR ++       ++  ++ GD H +ALD  G ++ WG    
Sbjct: 207 WGRNEFGQLGNGETEKSNIPRLVKNLE----NIEMIAGGDNHSLALDHDGAIWAWGYNSN 262

Query: 240 GALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G +G G            ++ +KT P  L+ L   +  QV A  + +  L + G VY +G
Sbjct: 263 GQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK-QVSAGIKHSTALTENGEVYAWG 321

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG      S   LR  +        +  I TG YH+  V + G ++ +GD    
Sbjct: 322 WNEYGQLGNGSMKDSKVPLRNNV-----GRSIIDIETGSYHSFAVDESGVIYAWGDATYG 376

Query: 348 QLGHDTL 354
           QLG  T 
Sbjct: 377 QLGDGTF 383



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%)

Query: 46  FPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           FP  +    VV ++A    +  +   G V+T G N+    G+       +  ++ E    
Sbjct: 27  FPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDV 86

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 161
           V    + + ++ T  +T  G V   G N+ G++  G   + RP    I  L+++   VQ+
Sbjct: 87  VS---LDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIARPVQ--INGLKDI---VQV 138

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           + G  + LA+  +G V+S+G      LG+G   D   P  ++       ++V + AG EH
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLS----NIVAIEAGAEH 194

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +AL + G V+ WG+   G LG+G+     +P  + +L++     +      +  L   G
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN--IEMIAGGDNHSLALDHDG 252

Query: 282 SVYGFGWMGFGSLGFPDRGVSDK--VLR-------PRILDSLRAHHVSQISTGLYHTVVV 332
           +++ +G+   G +G     V +K   LR       P  L+ L    V Q+S G+ H+  +
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK-VKQVSAGIKHSTAL 311

Query: 333 TDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           T+ G ++ +G NE  QLG+ +++    P
Sbjct: 312 TENGEVYAWGWNEYGQLGNGSMKDSKVP 339



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
           C     Q D L P+  ++       VV ++AG      L S G V+T G+   G LG+G 
Sbjct: 16  CSQQAVQEDALFPKNSES-----TSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGT 70

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           E D +    +  L  +  V + +    T  +   G+V+G+G+   G +    + ++    
Sbjct: 71  EKDSSYFGKVDEL--YDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIA---- 124

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           RP  ++ L+   + Q+STGL H++ +   G ++ +G+N   QLG+ T +    PT++
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV 179


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 177/359 (49%), Gaps = 15/359 (4%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSG 69
           L+ ++++++  GS++ G LG G    + +   R ++F  A  V Q++  E H   + + G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +VF+CG+N S   GH    +P  R +++  L     KQ   G + +  +   G +   GS
Sbjct: 81  EVFSCGNNDSGQLGHE---KPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137

Query: 130 NTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           N  GQLG G  L    TP+ +  L     VVQIA G  + LA+T NG +Y++GS S+  L
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKAL-GTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQL 196

Query: 189 GHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           G G+    E +P+ I       I +  ++ G  H + +  SG V+ WG+   G LG  D 
Sbjct: 197 GLGQDVKIETRPKLITGL--ATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254

Query: 248 IDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            DK +P  L +L+ + +    C  +   F+ +D G V+  G   +G LG    G +   +
Sbjct: 255 SDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGANSNEI 310

Query: 307 RPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            PR +  L    V+QIS G  HT+ +V  RG+++ +G     QLG  T R    P  + 
Sbjct: 311 LPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVL 369



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 135/288 (46%), Gaps = 9/288 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  HT+LI+ +  VFSCG++  G LGH   T +      ++   A    Q +   +
Sbjct: 65  QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIPGLD---AFIFKQAACGAS 121

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  V   GQ+F  G N+    G          PR+V+AL      Q+  G   T  LT 
Sbjct: 122 HSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN 181

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G ++  GSN+ GQLG G  +   T PK I  L  +  +  IA G  + + V+ +G V+ 
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATI-PIAFIACGGYHSIVVSKSGAVFG 240

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG  +  D+  P  ++T R   +  V  + G+E  V L   G V+T G G  
Sbjct: 241 WGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYV--ACGEEFSVFLTMDGGVFTCGAGMY 298

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 286
           G LGHG   ++ LP  +  L   +  Q+   KR T  LV + G VY +
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G+ HTL L +N  +++ GS+  G LG G +         I   +   +  ++   
Sbjct: 167 VQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGG 226

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V +SG VF  G N+    G  D +   + P L++ L+    K V  G  F+ FLT
Sbjct: 227 YHSIVVSKSGAVFGWGRNTFGQLGMNDISDK-YVPCLLKTLRNAKVKYVACGEEFSVFLT 285

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
           + G V TCG+  +GQLGHG   +   P+ I  +E +GSVV QI+ G  + LA V   G V
Sbjct: 286 MDGGVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKV 343

Query: 178 YSF 180
           Y++
Sbjct: 344 YAW 346


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 169/370 (45%), Gaps = 23/370 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G  H+++++     +S G++  G LG G +T        I       + Q +    
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQGIKITQAAVGSR 304

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               V  +G V+  G  S       D    I  P++VE+LKGV   Q   G  F+ FL+ 
Sbjct: 305 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSR 364

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV- 176
            G V+T       +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ 
Sbjct: 365 EGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMS 423

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS G G    LGHG ++++   + I+ F     + V V+AG  H  AL   G V TWG 
Sbjct: 424 VYSVGCGLGGKLGHGCKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGW 483

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G+ G LGHGDE  + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF
Sbjct: 484 GHTGCLGHGDEEYRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGF 543

Query: 297 PDRGVSDKVLR---PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFG 340
            +   +        P +++SL+       QIST           G  HT  + + G+L+ 
Sbjct: 544 QEDEEAADDADFSTPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYA 603

Query: 341 FGDNERAQLG 350
           FG   + QLG
Sbjct: 604 FGGGIKGQLG 613



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 15/253 (5%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGI-KITQAAVGSR 304

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 305 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 362

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 281
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 363 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 422

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 338
           SVY  G    G LG    G  +     ++++   +L  + VS ++ G +H   + D GR+
Sbjct: 423 SVYSVGCGLGGKLG---HGCKNNKGTTKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 478

Query: 339 FGFGDNERAQLGH 351
             +G      LGH
Sbjct: 479 CTWGWGHTGCLGH 491



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+     Q     R+
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQ 305

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 306 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 363

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEP 360
             G+++        +LGH +    +EP
Sbjct: 364 REGQVYTISWGRTERLGHSSDPSDVEP 390


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 17/320 (5%)

Query: 42   TRINFPSAAHVVQVSASENHAA------FVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            ++I  P  + V+      N A        V   G+VF CG+  N     GH   +  + +
Sbjct: 2671 SKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGH---SHNVAQ 2727

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P+ +  L     K+V   +G      LTI G V + G    G+LGHG+ +    PK +  
Sbjct: 2728 PKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVES 2787

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L+    +  +A G S+  AVT +G +Y++GSG    LGHG+   +L+P+ ++    + + 
Sbjct: 2788 LK-CKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVV 2846

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   + D   +AL    +VY+WG G  G LG G     +LP+ + +L S   +QV    
Sbjct: 2847 QVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGA 2906

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V  P++++ L   +V Q+S G  H + 
Sbjct: 2907 QFSLALSKNGKVWTWGKGDYFRLG---HGSDSHVRWPQVVEELADKNVIQVSVGALHCIA 2963

Query: 332  VTDRGRLFGFGDNERAQLGH 351
            VTDRG ++ +GDN+  Q G+
Sbjct: 2964 VTDRGEVYAWGDNDHGQQGN 2983



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 9/337 (2%)

Query: 27   GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 86
            G LG G E  +  + T  +  +A   VQ+   E     +   G+V+  G  +    G   
Sbjct: 3630 GQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGG 3688

Query: 87   TNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 144
            T   +  P L+E L+ V   QV   +G      LT  G V + G    G+LGHG      
Sbjct: 3689 TES-VSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCE 3747

Query: 145  TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
             PK I  L +   VV +A G ++   +T +G +Y++G G    LGHG+  D+L+P+ ++ 
Sbjct: 3748 RPKLIESLRD-KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEE 3806

Query: 205  FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
                 +  V   +GD   + +   G V++WG G  G LG G       P+ + SL++   
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGV 3866

Query: 265  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 323
            ++V    + +  L   G VY +G   +  LG    G  D V RP+ +  +L+   V Q++
Sbjct: 3867 IKVECGSQFSVALTAAGVVYTWGKGDYHRLG---HGSEDHVRRPQAVQGALQGKRVIQVA 3923

Query: 324  TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             G  H V  TD G +F +GDN+  QLG  +      P
Sbjct: 3924 VGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRP 3960



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 159/342 (46%), Gaps = 17/342 (4%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 57
            M I  G     ++S +  VF+CG    G LG  H     Q    T ++ P     V V +
Sbjct: 2688 MNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS-PYFIKKVAVHS 2746

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTG 116
               HA  +   G+VF+ G+      GH   N+  + RP+LVE+LK    + V  G + + 
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH--GNKISYDRPKLVESLKCKRIRDVACGSSHSA 2804

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGN 174
             +T  G ++T GS  +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T  
Sbjct: 2805 AVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-ERVVQVACGSRDAQTLALTER 2863

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
              VYS+G G    LG G       P+ ++T   +   V++V  G +  +AL  +G V+TW
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ--QVIQVECGAQFSLALSKNGKVWTW 2921

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            GKG    LGHG +     P+ +  L     +QV         + D G VY +G    G  
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQ 2981

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            G  +  V+ K   P I+  L A  ++ ++ G  H+V  +  G
Sbjct: 2982 GNGNTTVNRK---PAIVRGLEA--ITNVACGSSHSVAWSSTG 3018



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 14/283 (4%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +  SG VF+ G+      GH  +     RP+L+E+L+      V  G 
Sbjct: 3709 VAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH-GSKALCERPKLIESLRDKHVVSVACGG 3767

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIA--AGPSYM 168
              +  +T  G ++T G   +G+LGHGD+ D+  PK +   EE+   +V+ +A  +G +  
Sbjct: 3768 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKV---EELAGHNVLDVACGSGDAQT 3824

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            L V+ +G+V+S+G G    LG G       P+ I + +  G  V++V  G +  VAL ++
Sbjct: 3825 LCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG--VIKVECGSQFSVALTAA 3882

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G VYTWGKG    LGHG E     P+ +  +L+    +QV           D+G V+ +G
Sbjct: 3883 GVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                G LG    G ++ + RP+++ SL+   +++++ G  HTV
Sbjct: 3943 DNDEGQLG---DGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 125/257 (48%), Gaps = 6/257 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            G++   L S+  VFS G    G LGHG +   C     I      HVV V+    H+A +
Sbjct: 3715 GKHCLALTSSGDVFSWGEGDDGKLGHGSKAL-CERPKLIESLRDKHVVSVACGGAHSACI 3773

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 123
              SG+++T G       GH D+   + +P+ VE L G     V  G      L +   G 
Sbjct: 3774 TASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTLCVSRDGL 3832

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G   +G+LG G +     P+ I  L+  G V+++  G  + +A+T  GVVY++G G
Sbjct: 3833 VWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG-VIKVECGSQFSVALTAAGVVYTWGKG 3891

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
                LGHG +    +P+A+Q    +G  V++V+ G  H VA   SG V+TWG    G LG
Sbjct: 3892 DYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLG 3950

Query: 244  HGDEIDKTLPEPLSSLK 260
             G       P+ ++SLK
Sbjct: 3951 DGSTNAIQRPKLVASLK 3967



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 12/237 (5%)

Query: 119  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             I   V   G N   QLG   G  +  P   + I+ L+ +     IA G   +  V+ +G
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMN----IAGGSKSLFIVSHDG 2704

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             V++ G G+N  LG G  H+  QP+ +       I  V V +G  H +AL   G V++WG
Sbjct: 2705 KVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWG 2764

Query: 236  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            +G  G LGHG++I    P+ + SLK      V      +  +  +G +Y +G   +G LG
Sbjct: 2765 EGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLG 2824

Query: 296  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLG 350
              D       L+P+ + +L    V Q++ G     T+ +T+R  ++ +GD +  +LG
Sbjct: 2825 HGDNVPQ---LKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLG 2878



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G +H  G N  GQLG  +     T      L  +  V QI  G   + A+T +G VY+ G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPV-QIVGGEQTLFALTSDGKVYATG 3677

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G       P  I+T +   +  V V++G +H +AL SSG V++WG+G  G 
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG +     P+ + SL+    V V      +  +  +G +Y +G   +G LG    G 
Sbjct: 3738 LGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLG---HGD 3794

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+  L+P+ ++ L  H+V  ++  +G   T+ V+  G ++ +GD +  +LG     GC  
Sbjct: 3795 SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKF 3854

Query: 360  PTEI 363
            P +I
Sbjct: 3855 PQKI 3858



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 6/225 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAA 63
            G +   + ++  +++ G    G LGHG    Q +   ++   +  +V+ V+  + +    
Sbjct: 3767 GAHSACITASGELYTWGKGRYGRLGHGDSEDQ-LKPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             V + G V++ GD      G   ++   F P+ +++L+     +V  G  F+  LT  G 
Sbjct: 3826 CVSRDGLVWSWGDGDYGKLGRGGSDGCKF-PQKIDSLQNAGVIKVECGSQFSVALTAAGV 3884

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V+T G   + +LGHG       P+++    +   V+Q+A G  + +A T +G V+++G  
Sbjct: 3885 VYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDN 3944

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                LG G  +   +P+ + +   KG  + RV+ G  H V+  +S
Sbjct: 3945 DEGQLGDGSTNAIQRPKLVASL--KGKKMNRVACGSAHTVSWSTS 3987


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 158/345 (45%), Gaps = 25/345 (7%)

Query: 29  LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 88
           +G G E    VS   +       V QV     HAA +   G++FT G       GH +  
Sbjct: 250 VGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGN-R 308

Query: 89  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
             +  PR +EAL+G+PC QV  G  +T  +T  G ++T G+  +G+LG GD  DR TP  
Sbjct: 309 EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSR 368

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           +  L     V ++ AG  +   +T  G VY+F  G +   GHG+  D L PR I TF   
Sbjct: 369 VEGLHS--KVKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPRLIPTFSGG 424

Query: 209 GIHVVR---VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD--------EIDKTLPEP-- 255
              +VR   V  G  H +AL   G VY WG      LG G+        E    LP P  
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQL 484

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR---- 309
           + SL     V+V A    +  L   G +Y  G  + G   LG P     ++   P     
Sbjct: 485 VESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADF 544

Query: 310 -ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            ++D L+   + QI+ G  H+V V + G ++ FG  ++ QLGH++
Sbjct: 545 CLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHES 589



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 20/198 (10%)

Query: 48  SAAHVVQVSASEN--HAAFVLQSGQVFTCGDNSSFCCG-------HRDTNRPIF--RPRL 96
           S A V Q+S      H   +   GQV+  G N     G        R+     F   P+L
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQL 484

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--- 153
           VE+L G+   +V AG   +  LT+ G ++ CG N  GQLG G     P  +   P +   
Sbjct: 485 VESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADF 544

Query: 154 ------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
                 +   + QIA G  + +AV  NG V+SFG+G    LGH     E  PR +Q  + 
Sbjct: 545 CLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604

Query: 208 KGIHVVRVSAGDEHVVAL 225
               ++ V+ G+   + L
Sbjct: 605 TRREIMHVACGNNCTLVL 622



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCK 106
           + V +V A   H+  + + G V+  G +     GH D +  +  PRL+    G      +
Sbjct: 374 SKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGD-HEDVLDPRLIPTFSGGSGALVR 430

Query: 107 QVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGD--TLDR--------PTPKSIAPLEE 154
           Q++ G     T  LT +G V+  G N   QLG G+  T+ R        P+P+ +  L  
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL-- 488

Query: 155 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--------EQHDELQPRAIQTF 205
           VG ++V++ AG  +  A+T +G +Y  G      LG G        E+    Q       
Sbjct: 489 VGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID 548

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           R + + + +++ G EH VA+  +G V+++G G  G LGH     +  P  + +LKS
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 27/201 (13%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS--------AA 50
           + +  G YHT+ L     V++ G +    LG G   T   +     F PS          
Sbjct: 432 ISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGM 491

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR------------LVE 98
           ++V+V A   H+A +   GQ++ CG N     G      P   P+            L++
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCGRNYQ---GQLGLGSPQGFPQNERGHPFQADFCLID 548

Query: 99  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GS 157
            L+ +  KQ+  G   +  +   G V + G+   GQLGH  T     P+ +  L+     
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRRE 608

Query: 158 VVQIAAGPSYMLAVTGNGVVY 178
           ++ +A G +  L + G GV +
Sbjct: 609 IMHVACGNNCTLVLAG-GVAF 628


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 191 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 248
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 369 EEDTGLA 375
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIST 324
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4290 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4348

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 164
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4406

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4407 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4466

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4467 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4526

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4527 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4583

Query: 345  ERAQLGHDTLRGCLEP 360
            +  QLG  T      P
Sbjct: 4584 DEGQLGDGTTSALQRP 4599



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 91   IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3334

Query: 151  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             L + +   V + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 210  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 268
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3395 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3452

Query: 269  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3453 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3509

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3510 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3543



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G++F+ G
Sbjct: 3308 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWG 3366

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3367 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3425

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3426 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3483

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3484 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3541

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3542 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3598

Query: 313  SLRAHHVSQISTGLYHTV--VVTDR 335
             L    V+++S G  H++  V+TD+
Sbjct: 3599 ELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 19/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 55
            +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV    V V
Sbjct: 4295 VQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAV 4351

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 114
            ++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + 
Sbjct: 4352 NSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHH 4409

Query: 115  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVT 172
            +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT
Sbjct: 4410 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVT 4468

Query: 173  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +Y
Sbjct: 4469 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIY 4526

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            TWGKG    LGHG +     P  +++L+    + +           D G V+ +G    G
Sbjct: 4527 TWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEG 4586

Query: 293  SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4587 QLG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3273 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3331

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            L+  L     K+V   +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3332 LIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3391

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3392 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3448

Query: 214  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3449 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3508

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3509 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3565

Query: 332  VTDRGRLFGFGDNERAQLGH 351
            VTD G+++ +GDN+  Q G+
Sbjct: 3566 VTDTGQVYAWGDNDHGQQGN 3585



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  +FS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     T  LT 
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3464

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3465 DGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3523

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3524 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3581

Query: 241  ALGHGDEIDKTLP 253
              G+G  I    P
Sbjct: 3582 QQGNGSTIVNKKP 3594



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4314

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4435 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4491

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4492 CKIPMKI 4498



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3312

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G +++WG+G  G 
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3373 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3432

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3433 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3489

Query: 360  PTEI 363
            P  I
Sbjct: 3490 PLLI 3493



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 512 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 570

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 631 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 688

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + +  P++++ L+   V ++  G +H + +T+   ++G+G N+  Q+
Sbjct: 689 -HGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI 739



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 23/261 (8%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 555

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 114
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVYVACGSGDSQ 614

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 615 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 673

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G  + LGHG +     P+ I+  + K   V  +  G+ HV+AL     VY W
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPK--KVKELCVGNFHVLALTEDQLVYGW 731

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G+   G +     +   +PEP
Sbjct: 732 GRNDYGQIDPA--LGTIVPEP 750


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4323 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4381

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 164
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4439

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4440 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4499

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4500 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4559

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4560 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4616

Query: 345  ERAQLGHDTLRGCLEP 360
            +  QLG  T      P
Sbjct: 4617 DEGQLGDGTTSALQRP 4632



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 91   IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3339

Query: 151  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             L + +   + + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 210  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 268
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3400 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3457

Query: 269  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3458 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3514

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3515 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3548



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G ++  C     I F S   + +++      HA  + Q G++F+ G
Sbjct: 3313 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWG 3371

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3372 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3431 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3488

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3489 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3546

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3547 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3603

Query: 313  SLRAHHVSQISTGLYHTV--VVTDR 335
             L    V+++S G  H++  V+TD+
Sbjct: 3604 ELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 17/337 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 55
            +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV    V V
Sbjct: 4328 VQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAV 4384

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 114
            ++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + 
Sbjct: 4385 NSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHH 4442

Query: 115  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTG 173
            +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  L VT 
Sbjct: 4443 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTD 4502

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YT
Sbjct: 4503 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYT 4560

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P  +++L+    + +           D G V+ +G    G 
Sbjct: 4561 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4620

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4621 LG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3278 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3336

Query: 96   LVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            L+  L     K+  V +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3337 LIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3396

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3397 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3453

Query: 214  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3454 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3513

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3514 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3570

Query: 332  VTDRGRLFGFGDNERAQLGH 351
            VTD G+++ +GDN+  Q G+
Sbjct: 3571 VTDTGQVYAWGDNDHGQQGN 3590



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 123/259 (47%), Gaps = 14/259 (5%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            M + +G  H L L  +  +FS G    G LGHG      VS  +   I    +  +  ++
Sbjct: 3349 MAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIA 3404

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--F 114
                H+A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     
Sbjct: 3405 CGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQ 3463

Query: 115  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            T  LT  G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  
Sbjct: 3464 TMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKY 3522

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            G V+++G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY W
Sbjct: 3523 GEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAW 3580

Query: 235  GKGYCGALGHGDEIDKTLP 253
            G    G  G+G  I    P
Sbjct: 3581 GDNDHGQQGNGSTIVNKKP 3599



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4347

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4468 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4524

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4525 CKIPMKI 4531



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3317

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+  +  +P+ I    +  I  + V +G +H +AL   G +++WG+G  G 
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK 3377

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3378 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3437

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3438 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3494

Query: 360  PTEI 363
            P  I
Sbjct: 3495 PLLI 3498



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 520 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 578

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 696

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + +  P++++ L    V ++  G +H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI 747



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 563

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 114
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G  + LGHG +     P+ I+    K   V  +  G+ HV+AL     VY W
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK--KVKELCVGNFHVLALTEDQLVYGW 739

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +L+++GN  +  +GS + +            P+ +  F  K + ++   +   H +AL  
Sbjct: 475 ILSISGNVYMMYYGSETQY------------PQRVYGFSEKPVTMIASHSDGTHYLALTQ 522

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
              VY+WG G  G LGHGD +    P+ + +L       +      + VL   G +Y +G
Sbjct: 523 DSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWG 582

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              +G LG    G SD VL P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 346 RAQLGH 351
             +LG 
Sbjct: 640 YGKLGR 645


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3963 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMVPTLLESIQHVFIKK 4021

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  GHV++ G    G+LGHG+ L    PK +  L  +  +V IA G 
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI-EIVDIACGG 4080

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4081 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4141 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4200

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4201 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4257

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 4258 EGQLGDGTTSALQRP 4272



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 149/311 (47%), Gaps = 10/311 (3%)

Query: 54   QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            QV+A  +  A   QS  V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2937 QVTAQRSTDAPPQQSA-VYVWGLNDKDQLGGLKGSK-IKIPVRSEVLSKLKPIHIAGGSK 2994

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 172
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 173  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             +G V+S+G G +  LGHG      +PR I++ + K I    ++ G  H  A+ S+G +Y
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR--DIACGSGHSAAIASNGELY 3112

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 290
            TWG G  G LGHGD   +  P+ + +L     VQV   +R  +T  L   G VY +G   
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGD 3172

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            FG LG   RG SD    P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3173 FGKLG---RGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3229

Query: 351  HDTLRGCLEPT 361
            H       +PT
Sbjct: 3230 HGNDHHVRKPT 3240



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2970 SKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGD-DYNMCEPK 3028

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAP 151
            L+  L     K+V   +G      LT  G V + G    G+LGHG+  TLD+P  + I  
Sbjct: 3029 LIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKP--RLIES 3086

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L+    +  IA G  +  A+  NG +Y++G G    LGHG+   +++P+ +Q     G  
Sbjct: 3087 LKS-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQAL--SGQR 3143

Query: 212  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VV+V+ G  D   ++L + G VYTWG G  G LG G       P  +  L     VQV  
Sbjct: 3144 VVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVEC 3203

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H 
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260

Query: 330  VVVTDRGRLFGFGDNERAQLGHDT 353
            + VTD G+++ +GDN+  Q G+ T
Sbjct: 3261 LAVTDTGQVYAWGDNDHGQQGNGT 3284



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 14   SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 69
            ++  V+S G    G LG G   +  V        S  HV    V V++   H   +   G
Sbjct: 3982 ADGKVYSTGYGAAGRLGIGGTDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 70   QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
             V++ G+      GH   NR  + RP+LVE L G+    +  G + +  +T  G ++T G
Sbjct: 4039 HVYSWGEGDDGKLGH--GNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG 4096

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 186
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4097 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4155

Query: 187  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
             LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4156 KLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4213

Query: 247  EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            +     P  +++L+    + +           D G V+ +G    G LG    G +  + 
Sbjct: 4214 DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSALQ 4270

Query: 307  RPRILDSLRAHHVSQISTGLYHTV 330
            RPR++ +L+   +++++ G  HT+
Sbjct: 4271 RPRLVHALQGKKITRVACGSAHTL 4294



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 12/317 (3%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3005 LYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 3063

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH +    + +PRL+E+LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3064 EGEDGKLGHGNCTT-LDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3122

Query: 136  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            GHGDT  +  PK +  L     VVQ+A G   +  +++T +G VY++G G    LG G  
Sbjct: 3123 GHGDTATQMKPKLVQALSG-QRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGS 3181

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
                 P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     P
Sbjct: 3182 DGCYTPLLVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3239

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              +  L+    V V         + DTG VY +G    G  G    G +    +P ++  
Sbjct: 3240 TLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPSLVHE 3296

Query: 314  LRAHHVSQISTGLYHTV 330
            L    ++++S G  H++
Sbjct: 3297 LDDTRMNRVSCGSSHSI 3313



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3987

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            S G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4107

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4108 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4164

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4165 CKVPLKI 4171



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 7/187 (3%)

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + LA+T +G VYS+G+G    LGHG+     +P+ I+T   K I  + ++ G  +  AL 
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNI--IFIACGSTYSAALS 577

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVY 284
           +SG +YTWG+G  G LGHG   D T+P  +++LK H+ V V   +   +T  +  +G V+
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G   +G LG   RG SD    P+I+D L   +V ++  G   +  +T RG ++ +G  
Sbjct: 638 SWGDGDYGKLG---RGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 345 ERAQLGH 351
           +  +LGH
Sbjct: 695 DAYRLGH 701



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG     C +  +   I    +  +  ++    H+
Sbjct: 3047 GKHALALTQDGKVFSWGEGEDGKLGHG----NCTTLDKPRLIESLKSKRIRDIACGSGHS 3102

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3103 AAIASNGELYTWGLGEYGRLGHGDTATQM-KPKLVQALSGQRVVQVACGSRDAQTMSLTA 3161

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V+T G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3162 DGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3220

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG    G
Sbjct: 3221 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3278

Query: 241  ALGHGDEIDKTLP 253
              G+G  I    P
Sbjct: 3279 QQGNGTTIVNRKP 3291



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 119/234 (50%), Gaps = 8/234 (3%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G+   G+LGHGD +    PK I  L E  +++ IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLE-KNIIFIACGSTYSAALSASGEL 582

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 235
           Y++G G+   LGHG   D   P  + T   KG  VV V+  +GD   + + +SG V++WG
Sbjct: 583 YTWGRGNYGRLGHGSNDDVTVPTLVTTL--KGHMVVHVACGSGDSQTLCVTASGIVFSWG 640

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G  G LG G       P+ +  L     V+V    + +  L   G VY +G      LG
Sbjct: 641 DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
               G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 701 ---HGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 9/268 (3%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   + Q G V++ G+      GH D N     P+L+E L       +  G  ++  L+
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGD-NISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 177
             G ++T G   +G+LGHG   D   P  +  L+    VV +A  +G S  L VT +G+V
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG-HMVVHVACGSGDSQTLCVTASGIV 636

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +S+G G    LG G       P+ +       I+VVRV  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGSDGSKTPKIVDKLL--DINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
               LGHG+E     P+ + SL+      +         L +   VYG+G   +G +   
Sbjct: 695 DAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI--- 751

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTG 325
           D  +   V  P +  +L + +V  +++G
Sbjct: 752 DPTLGPVVSEPSLCPTLSSKNVIGLASG 779



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           + G+++  L  +  V+S G+   G LGHG   +       I      +++ ++    ++A
Sbjct: 516 SDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH-DEPKLIETLLEKNIIFIACGSTYSA 574

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
            +  SG+++T G  +    GH  +N  +  P LV  LKG     V   +G + T  +T  
Sbjct: 575 ALSASGELYTWGRGNYGRLGH-GSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V + G   +G+LG G +    TPK +  L ++ +VV++  G  +  A+T  G VY++G
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDI-NVVRVFCGGQFSAALTARGEVYTWG 692

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G  + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G 
Sbjct: 693 KGDAYRLGHGNEEHVRYPKLIESLRDKKIK--DLSVGGTHILALTEDQFVYGWGRNDYG- 749

Query: 242 LGHGDEIDKTL 252
                +ID TL
Sbjct: 750 -----QIDPTL 755



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSAS 58
            + +G  H L +S+   V+S G    G LGHG      +S+ R           +V ++  
Sbjct: 4024 VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSYDRPKLVEDLLGIEIVDIACG 4079

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D++  + RP++VEAL+      V  G      L
Sbjct: 4080 GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTL 4138

Query: 119  --TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              T   +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4139 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VIKVECGSQFSVALTRSGA 4197

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4198 VYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVFTWGD 4255

Query: 237  GYCGALGHG 245
               G LG G
Sbjct: 4256 NDEGQLGDG 4264



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +L+++GN  +  +GS + +            P+ + +F  K + ++   +  +H +AL  
Sbjct: 479 ILSLSGNVYIMYYGSETQY------------PQRMHSFSDKPVTMIASHSDGKHYLALTQ 526

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G VY+WG G  G LGHGD I    P+ + +L     + +      +  L  +G +Y +G
Sbjct: 527 DGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWG 586

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              +G LG    G +D V  P ++ +L+ H V  ++  +G   T+ VT  G +F +GD +
Sbjct: 587 RGNYGRLG---HGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGD 643

Query: 346 RAQLGH 351
             +LG 
Sbjct: 644 YGKLGR 649



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 17/162 (10%)

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3907 QEHDE---QLLQWLNRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKIK 3954

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G +D V+ P +L
Sbjct: 3955 LPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGI---GGTDSVMVPTLL 4011

Query: 312  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 4012 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+EAL     + V  G
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPQLIEALSNTNIEFVACG 375

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 376 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 434

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             V+  G +++FG G+   LGHG++     PR +++   KG+  V+ + G  H  A+   
Sbjct: 435 AVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESL--KGLRTVQAACGVWHTAAVVEV 492

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  K +P  +S+L      QV      T  
Sbjct: 493 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIA 552

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
              +G VY  G   +G LG P    SD  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 553 RTTSGHVYTMGSPVYGQLGNPQ---SDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKT 609

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 610 EVYTWGKGANGRLGH 624



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 372 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 430

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  + I  PR VE+LKG+   Q   G+  T  +
Sbjct: 431 PWHTAVVSSAGQLFTFGDGTFGVLGHGD-RKSISLPREVESLKGLRTVQAACGVWHTAAV 489

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  ++ L E  +  Q+A G S
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEP-NFCQVACGHS 548

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A T +G VY+ GS     LG+ +   +L  R      R  +    ++ G  HV  L 
Sbjct: 549 LTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVE--EIACGAYHVAVLT 606

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  DK LP  + +LK
Sbjct: 607 SKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALK 640



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D L
Sbjct: 298 GVKMDSLLPKALESAV-VLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 356

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE- 254
            P+ I+      I  V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+ 
Sbjct: 357 HPQLIEALSNTNIEFV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 414

Query: 255 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
              PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR +
Sbjct: 415 VNGPLEGI--HVSSISCG-PWHTAVVSSAGQLFTFGDGTFGVLGHGDR---KSISLPREV 468

Query: 312 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 359
           +SL+     Q + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 469 ESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 528

Query: 360 PT 361
           PT
Sbjct: 529 PT 530



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   P+ I  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 366 NT-NIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 423

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 424 VSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGV 483

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 484 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVSALVEPNF 540

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            Q++ G   T+  T  G ++  G     QLG+    G L
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL 579



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT ++S++  +F+ G    GVLGHG   +  +S  R +        VQ +    
Sbjct: 427 ISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS--ISLPREVESLKGLRTVQAACGVW 484

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVSALVEPNFCQV 543

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T   T  GHV+T GS  +GQLG+  + D   P  +       SV +IA G  ++
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYHV 602

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  +
Sbjct: 603 AVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSI 647



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G + D L P+A+++     + V  ++ G +H   +   G +++WG+   G LGHG + D 
Sbjct: 298 GVKMDSLLPKALESAVV--LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV 355

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP 308
             P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  VS  V + 
Sbjct: 356 LHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 413

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           R+   L   HVS IS G +HT VV+  G+LF FGD     LGH   +    P E+
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREV 468



 Score = 43.1 bits (100), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 9   HTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           H+L I+ ++   V++ GS + G LG+ P++   +        S + V +++    H A +
Sbjct: 547 HSLTIARTTSGHVYTMGSPVYGQLGN-PQSDGKLPARVEGKLSRSSVEEIACGAYHVAVL 605

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
               +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 606 TSKTEVYTWGKGANGRLGHGDTDDKNL-PSLVEALKDKQVKSIACGTNFTAAICLHKWV 663


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 21/292 (7%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-----HGQLGHGDTLDRPTP 146
            RP+ VEAL     + V+AGL  +   T  G + + G  +      G+LGHGD   +  P
Sbjct: 98  LRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIP 157

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           + +  L  V  +V++AAG  + L ++  G V+SFG G +  LGHG+Q  +L P+ I + +
Sbjct: 158 RPVLSLSGV-RIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQ 216

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           R+   VV ++AG  H + +  SG VY++G G  GALGHGD     +P+ +       AV+
Sbjct: 217 RE--KVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274

Query: 267 VCARK------RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
           V A         K +VL   G V  FG   +G LG    G   +++       + A  V 
Sbjct: 275 VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGL---GHFSRMIASPAQVQVEAAAV- 330

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEED 371
           +I  G +H++V+T+ GR++ FG  +  QLGH + LR   EPT   IQ +E +
Sbjct: 331 EIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPT--LIQSLERE 380



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 153/324 (47%), Gaps = 18/324 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEALKGVPCK 106
           V  VSA   H+    + G + + G  S+        GH D  R    PR V +L GV   
Sbjct: 111 VRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGD-QRTQMIPRPVLSLSGVRIV 169

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           +V AG + +  L+ +G+V + G    G LGHGD   +  PK I+ L+    VV IAAG +
Sbjct: 170 KVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQRE-KVVDIAAGSA 228

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH----- 221
           + L V  +G VYSFG GS   LGHG+    L P+ I+ F ++    V+V+AG  H     
Sbjct: 229 HSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR--PAVKVAAGGSHSLVLS 286

Query: 222 -VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +  L+  G V ++G+   G LG G    + +  P        AV++ A    + VL + 
Sbjct: 287 KLYVLEQEGRVLSFGQNSYGQLGLG-HFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTND 345

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G VY FG    G LG  +    +    P ++ SL    +  ++ G   ++V++  G +F 
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNP--EPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFS 403

Query: 341 FGDNERAQLGHDTLRGCLEPTEIF 364
           FG  +  +LG        +PT +F
Sbjct: 404 FGCGKNGRLGKGDESNATQPTVVF 427



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 17/226 (7%)

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGH 190
           GHGD +D+  PK +  L     V  ++AG  + L  T +G + SFG GS        LGH
Sbjct: 90  GHGDHVDKLRPKCVEALARE-RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G+Q  ++ PR + +    G+ +V+V+AG  H + L   G V+++G G  G+LGHGD+  +
Sbjct: 149 GDQRTQMIPRPVLSL--SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
            +P+ +SSL+    V + A    + V+ ++G VY FG    G+LG  D   +D  L P+ 
Sbjct: 207 LVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGD---TDMSLVPKK 263

Query: 311 LDSLRAHHVSQISTGLYHTVVVT------DRGRLFGFGDNERAQLG 350
           ++        +++ G  H++V++        GR+  FG N   QLG
Sbjct: 264 IEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLG 309



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 162/346 (46%), Gaps = 27/346 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 56
           ++ G YH+L+ +       F  GS+   + G LGHG + TQ +    ++  S   +V+V+
Sbjct: 114 VSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL-SGVRIVKVA 172

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           A  +H+  +   G VF+ G       GH D  R +  P+L+ +L+      + AG   + 
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV-PKLISSLQREKVVDIAAGSAHSL 231

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--- 173
            +   G V++ G  + G LGHGDT     PK I    +    V++AAG S+ L ++    
Sbjct: 232 VVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGSHSLVLSKLYV 290

Query: 174 ---NGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
               G V SFG  S   LG G     +  P  +Q         V + AG  H + L + G
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAA----AVEIEAGAHHSLVLTNDG 346

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            VY++G    G LGHG+++ +  PEP  + SL+    V V A    + VL   G+V+ FG
Sbjct: 347 RVYSFGLAQHGQLGHGNDL-RDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G LG   +G      +P ++ +   H VS IS G  H++VV 
Sbjct: 406 CGKNGRLG---KGDESNATQPTVVFAA-GHTVSAISAGYSHSLVVV 447



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H+L+++ S  V+S G    G LGHG +T   +   +I        V+V+A  
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-DTDMSLVPKKIEHFVQRPAVKVAAGG 279

Query: 60  NHAA-----FVL-QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +H+      +VL Q G+V + G NS    G    +R I  P  V+        ++ AG +
Sbjct: 280 SHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQV--EAAAVEIEAGAH 337

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +  LT  G V++ G   HGQLGHG+ L D P P  I  LE    +V +AAG ++ L ++
Sbjct: 338 HSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE-RIVDVAAGNNFSLVLS 396

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
             G V+SFG G N  LG G++ +  QP  +      G  V  +SAG  H
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA---AGHTVSAISAGYSH 442



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-----MGF 291
           G     GHGD +DK  P+ + +L       V A    + V    G +  FG+     +  
Sbjct: 84  GLADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVD 143

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG  D+      + PR + SL    + +++ G +H++V++D+G +F FG      LGH
Sbjct: 144 GRLGHGDQRTQ---MIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGH 200

Query: 352 DTLRGCLEPTEIFIQEMEEDTGLA 375
                 L P  I   + E+   +A
Sbjct: 201 GDQARQLVPKLISSLQREKVVDIA 224


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3974 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4032

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  ++ IA G 
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGV-EIIDIACGG 4091

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4092 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4152 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4211

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4212 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4268

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 4269 EGQLGDGTTSALHRP 4283



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 149/311 (47%), Gaps = 9/311 (2%)

Query: 54   QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            QV+   +  A   Q   V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSK-IKLPVYSEVLSKLKPIHIAGGSK 3004

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 172
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064

Query: 173  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             +G V+S+G G +  LGHG      +P+ I+T + K I    ++ G  H  A+ S+G +Y
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--DIACGSGHSAAIASNGELY 3122

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 290
            TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T  L   G VY +G   
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGD 3182

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            FG LG   RG SD    P +++ L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3183 FGKLG---RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3239

Query: 351  HDTLRGCLEPT 361
            H       +PT
Sbjct: 3240 HGNDHHVRKPT 3250



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 152/318 (47%), Gaps = 14/318 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3015 LYACGEGTNGRLGLGDDNNVC-EPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3073

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH + N  + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3074 EGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3132

Query: 136  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3133 GHGDTVTQARPKLVQTL--VGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 3190

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  ++  R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3191 SDGCYTPLVVE--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3248

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    V V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3249 PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3305

Query: 313  SLRAHHVSQISTGLYHTV 330
             L    V+++S G  H++
Sbjct: 3306 ELEDARVNRVSCGSSHSI 3323



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 19/339 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2980 SKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 3038

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK 3098

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +QT    G  VV
Sbjct: 3099 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVV 3155

Query: 214  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQV    
Sbjct: 3156 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGA 3215

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3216 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3272

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            VTD G+++ +GDN+  Q G+ T     +P+   + E+E+
Sbjct: 3273 VTDTGQVYAWGDNDHGQQGNGTTSVNRKPS--LVHELED 3309



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 179
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3943 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDD 4059

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LGHG+++    P+ +  L     + +      +  +   G +Y +G   +G LG  D 
Sbjct: 4060 GKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4118

Query: 300  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4119 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176

Query: 358  LEPTEI 363
              P +I
Sbjct: 4177 KVPLKI 4182



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 18/324 (5%)

Query: 14   SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 69
            ++  V+S G    G LG G   T  V    +   S  HV    V VS+   H   +   G
Sbjct: 3993 ADGKVYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 70   QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
             V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T G
Sbjct: 4050 HVYSWGEGDDGKLGH--GNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG 4107

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 186
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4108 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4166

Query: 187  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
             LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4167 KLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4224

Query: 247  EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            +     P  +++L+    + +           D G V+ +G    G LG    G +  + 
Sbjct: 4225 DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSALH 4281

Query: 307  RPRILDSLRAHHVSQISTGLYHTV 330
            RPR++ +L+   +++++ G  HT+
Sbjct: 4282 RPRLVHALQGKKITRVACGSAHTL 4305



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G+   G+LGHGDT+    PK I  L E  ++V IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLE-KNIVFIACGSTYSAALSVSGEL 582

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 583 YTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 642

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG-- 700

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + V  P+I++SLR   +  +S G  H +V+T+   ++G+G N+  Q+
Sbjct: 701 -HGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 9/268 (3%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++  L+
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIEALLEKNIVFIACGSTYSAALS 577

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 177
           + G ++T G   +G+LGHG+  D   P  +  L+   +VV +A  +G S  L VT +G+V
Sbjct: 578 VSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKG-HTVVHVACGSGDSQTLCVTASGIV 636

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTWGKG 694

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
               LGHG E     P+ + SL+      +        VL +   VYG+G   +G +   
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI--- 751

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTG 325
           D  +   +  P +  +L +  V  +++G
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASG 779



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 58
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--------DIACG 3108

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 116
              H+A +  +G+++T G       GH DT     RP+LV+ L G    QV  G     T 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA-RPKLVQTLVGHRVVQVACGSRDAQTM 3167

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             LT  G V++ G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G 
Sbjct: 3168 ALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGE 3226

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+++G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGD 3284

Query: 237  GYCGALGHG 245
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 26/291 (8%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASEN 60
           + G++H  L  +  V+S G+   G LGHG      VS+       A    ++V ++    
Sbjct: 516 SDGKHHLALTQDGCVYSWGNGDGGRLGHG----DTVSYDEPKLIEALLEKNIVFIACGST 571

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 118
           ++A +  SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +
Sbjct: 572 YSAALSVSGELYTWGRGNYGRLGHGNFD-DVMIPTLVTTLKGHTVVHVACGSGDSQTLCV 630

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY
Sbjct: 631 TASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVY 689

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G G  + LGHG +     P+ I++ R K I    +S G  H++ L    +VY WG+  
Sbjct: 690 TWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIK--DLSVGATHILVLTEDQFVYGWGRND 747

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 288
            G      +ID TL   +S         +C     KT + + +G    F W
Sbjct: 748 YG------QIDPTLGSVISE------PTLCPTLSSKTVIGLASGPTQSFAW 786



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 14/249 (5%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            +++G  H L +S+   V+S G    G LGHG +    +S+ R   I       ++ ++  
Sbjct: 4035 VSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNK----MSYDRPKLIEDLLGVEIIDIACG 4090

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D++  + RP++VEAL+      V  G      L
Sbjct: 4091 GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTL 4149

Query: 119  --TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              T   +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4150 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VIKVECGSQFSVALTRSGA 4208

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4209 VYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVFTWGD 4266

Query: 237  GYCGALGHG 245
               G LG G
Sbjct: 4267 NDEGQLGDG 4275



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 455 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 503

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
           F  K + ++   +  +H +AL   G VY+WG G  G LGHGD +    P+ + +L     
Sbjct: 504 FSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNI 563

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 323
           V +      +  L  +G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 564 VFIACGSTYSAALSVSGELYTWGRGNYGRLG---HGNFDDVMIPTLVTTLKGHTVVHVAC 620

Query: 324 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 621 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 658



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3933 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3992

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 336
              G VY  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 3993 ADGKVYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ +  +LGH
Sbjct: 4050 HVYSWGEGDDGKLGH 4064


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3984 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 4042

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 164
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 4100

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 4160

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G++Y
Sbjct: 4161 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIY 4220

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4221 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4277

Query: 345  ERAQLGHDTLRGCLEP 360
            +  QLG  T      P
Sbjct: 4278 DEGQLGDGTTSALQRP 4293



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 91   IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 3014

Query: 151  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 3015 FLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 3074

Query: 210  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 268
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 3075 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIAC 3132

Query: 269  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3133 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3189

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3190 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3223



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G ++  C     I F S   + +VS      HA  + Q G+VF+ G
Sbjct: 2988 LYACGEGTNGRLGLGDDSNVCEP-KPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWG 3046

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3047 EGEDGKLGHGNS-ISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT  +  PK +  L  VG  ++QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 3106 GHGDTATQSKPKLVQSL--VGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3163

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3164 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3221

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3222 PTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3278

Query: 313  SLRAHHVSQISTGLYHTV--VVTDR 335
             L    V+++S G  H++  V+TD+
Sbjct: 3279 ELDDARVNRVSCGSSHSIAWVLTDQ 3303



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 20/335 (5%)

Query: 5    TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 58
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3992 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4048

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 117
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 4049 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 175
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 4165

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG +YTWG
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRSGAIYTWG 4223

Query: 236  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            KG    LGHG +     P  +++L+    + +           D G V+ +G    G LG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283

Query: 296  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4284 ---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4315



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 13/320 (4%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2953 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3011

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
             +  L     K+V+  +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 3012 PIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 3071

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+   + I  +
Sbjct: 3072 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI 3130

Query: 214  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
               + D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    + 
Sbjct: 3131 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3190

Query: 274  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + VT
Sbjct: 3191 SLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVT 3247

Query: 334  DRGRLFGFGDNERAQLGHDT 353
            D G+++ +GDN+  Q G+ T
Sbjct: 3248 DIGQVYAWGDNDHGQQGNGT 3267



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2992

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3053 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3112

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              K   P+++ SL    + QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3113 QSK---PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3169

Query: 360  PTEI 363
            P  I
Sbjct: 3170 PLLI 3173



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 4008

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4128

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4129 ---SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4185

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4186 CKIPMKI 4192



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 3030 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 3086 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3203

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+   G VY WG    G
Sbjct: 3204 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG 3261

Query: 241  ALGHGDEIDKTLP 253
              G+G  I    P
Sbjct: 3262 QQGNGTTIVNKKP 3274



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 9/267 (3%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H   + Q   V++ G+      GH D  R  +  P+L+EAL       +  G  ++  L+
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGD--RAWYDEPKLIEALVEKNITFIACGSTYSAALS 573

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVY 178
             G ++T G   +G+LGHG++ +   P  +  L   +   V   +G S  L VT +G+V+
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKGE 691

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
              LGHG+E     P+ +  LK+    ++C        L +   +YG+G   +G +   D
Sbjct: 692 AYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI---D 748

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTG 325
             +   V  P +  +L   +V  ++ G
Sbjct: 749 PALGTVVPEPTLCPTLSGKNVIGLACG 775



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT    V++ G+   G+LGHGD      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 520 LTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 578

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   + + P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 696

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  D V  P+I+D L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI 747



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           ++ LA+T +  VYS+G+G    LGHG++    +P+ I+    K I    ++ G  +  AL
Sbjct: 515 THYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--IACGSTYSAAL 572

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 283
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V V   +   +T  +  +G V
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           + +G   +G LG   RG  D    P+I+D L   +V+++  G   +  +T  G ++ +G 
Sbjct: 633 FSWGDGNYGKLG---RGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 689

Query: 344 NERAQLGH 351
            E  +LGH
Sbjct: 690 GEAYRLGH 697



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 14/249 (5%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L +S+   V+S G    G LGHG      +S+ R   I       +V ++  
Sbjct: 4045 VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSYDRPKLIEELLGTEIVDIACG 4100

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 116
             +H+A +  +G ++T G       GH D+   +  P+L+EAL+      V   +G   T 
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIEALQDYKVIDVACGSGDAQTL 4159

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             +T   +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4160 CVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VVKVECGSQFSVALTRSGA 4218

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            +Y++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4219 IYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACTDKGEVFTWGD 4276

Query: 237  GYCGALGHG 245
               G LG G
Sbjct: 4277 NDEGQLGDG 4285



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L  ++SV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--------IA 563

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 114
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDN-VMIPTLVTALNGHMVVYVACGSGDSQ 622

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G  + LGHG +     P+ I   + K   V  +  G+ HV+AL     +Y W
Sbjct: 682 GEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTK--KVKELCVGNLHVLALTEDQLIYGW 739

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 17/186 (9%)

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +L+V GN  +  +GS + +            P+ +  F  K I ++   +   H +AL  
Sbjct: 475 ILSVNGNVYMMYYGSETQY------------PQRVYGFSEKPIIMIASHSDGTHYLALTQ 522

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
              VY+WG G  G LGHGD      P+ + +L       +      +  L   G +Y +G
Sbjct: 523 DNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWG 582

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              +G LG    G SD V+ P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 346 RAQLGH 351
             +LG 
Sbjct: 640 YGKLGR 645


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 191 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 248
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 369 EEDTGLA 375
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 12/308 (3%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH    R   +P  + AL     
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE---REGNKPEQIGALADQHI 86

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAG 164
             V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSCG 145

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSF 203

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
           + FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ FG
Sbjct: 264 FTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 343 DNERAQLG 350
              R QLG
Sbjct: 321 CGARGQLG 328



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIST 324
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 7/282 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
             G LG G   +   P P+    +  + Q+ AR  K   L +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARAGKNDCLWN 364


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 9/294 (3%)

Query: 6   GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 125 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           H     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG 
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI 329



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 176
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3197

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG--- 3254

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            RG S+    P  +D L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3255 RGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVR 3314

Query: 359  EPTEI 363
            +PT I
Sbjct: 3315 KPTPI 3319



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 12/349 (3%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S++F  G +  G LG G + ++  + T     S    +Q++  E     V   G+++  G
Sbjct: 4089 STIFGWGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4147

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + G    G
Sbjct: 4148 YGAGGRLGVGGTDS-VTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 134  QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
            +LGHG  D+ DRP  K I  L  +G VV IA G ++   +T  G V ++G G    LGHG
Sbjct: 4207 KLGHGNRDSYDRP--KLIESLSGIG-VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHG 4263

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
            +  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G      
Sbjct: 4264 DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCK 4323

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            +P  + SL      +V    + +  L  +GSVY +G   +  LG    G +D V RP+ +
Sbjct: 4324 VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKV 4380

Query: 312  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4381 AALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRP 4429



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+E+L G+    +  G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIESLSGIGVVDIACG 4236

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +TI+GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4297 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4354

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4355 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4414

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4415 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3047 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3103

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3104 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3163

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +   +   + 
Sbjct: 3164 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV 3222

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3223 QVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGA 3282

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3283 QFSLALTKAGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339

Query: 332  VTDRGRLFGFGDNERAQLG 350
            VTD G+++ +GDN+  Q G
Sbjct: 3340 VTDSGQVYAWGDNDHGQQG 3358



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 21/339 (6%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 54
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3064 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3119

Query: 55   VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 113
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3120 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3177

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 171
             +  +T  G ++T G   +G+LGHGD   +  PK +  L++   VVQ+A G   +  L +
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQD-HRVVQVACGSRDAQTLCL 3236

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            T +G+V+S+G G    LG G       P   Q  R  G+ V+++  G +  +AL  +G V
Sbjct: 3237 TEDGLVFSWGDGDFGKLGRGGSEGCSIPH--QVDRLNGVGVMQIECGAQFSLALTKAGEV 3294

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354

Query: 292  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3355 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3390



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 19/303 (6%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V Q+  +EN    +  SG V       S      + N P         +KG+ C  V  
Sbjct: 564 QVRQIVCAENCVYILTDSGTVLYL----SHAISMTEDNYP-------AQVKGLECTIVQL 612

Query: 111 GLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
             +  G     L   G V++ GS   G+LGHGDT  +  P  IA L +   V  +  G S
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALAD-RQVTGVFCGSS 671

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           Y  A+T +G +Y++G G+   LGHG   D+  P  +   +   +  V +  GD H + + 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            +G  + WG G  G LG+   +  ++P  +   ++   V+V +  + +  L   G+VY +
Sbjct: 732 EAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTW 791

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG    G S+    P+++ +L    +  ++ GL H + +T  G L+G+G N+ 
Sbjct: 792 GKGHGGRLG---HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDF 848

Query: 347 AQL 349
            Q+
Sbjct: 849 QQI 851



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 12/303 (3%)

Query: 36  TQCVSFTRINFPSAAH-----VVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 88
           +  +S T  N+P+        +VQ++A     H   +  SG V++ G       GH DT+
Sbjct: 588 SHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTS 647

Query: 89  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
                P  + AL       V  G +++  +T  G ++T G  T+G+LGHG++ D+  P  
Sbjct: 648 AKEL-PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTL 706

Query: 149 IAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
           +  L+    V V +  G ++ L VT  G+ +++G G    LG+        P  +Q    
Sbjct: 707 VTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVP--VQVDLP 764

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           +   VV+V +G +  VAL   G VYTWGKG+ G LGHG+     +P+ + +L+    V +
Sbjct: 765 QASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDL 824

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                    L  +G +YG+G   F  +  P+    D ++   IL +     V+ ++ G+ 
Sbjct: 825 AVGLAHCLALTASGELYGWGRNDFQQI-CPECVTRDPIITAPILTTPPTLRVAGMAAGVA 883

Query: 328 HTV 330
            ++
Sbjct: 884 QSL 886



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3026 VSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3082

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3202

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3203 DNCTQ---LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSE 3259

Query: 356  GCLEPTEI 363
            GC  P ++
Sbjct: 3260 GCSIPHQV 3267



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 122/277 (44%), Gaps = 13/277 (4%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L S+  VFS G    G LGHG       S+ R   I   S   VV ++    H+
Sbjct: 4185 GKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIESLSGIGVVDIACGSAHS 4240

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
            A +   G V T G       GH D+   + +P+LVEAL G     +  G      L I  
Sbjct: 4241 ACITIQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDAQTLCITD 4299

Query: 123  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G VY++
Sbjct: 4300 DDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTRSGSVYTW 4358

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+TWG    G
Sbjct: 4359 GKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFTWGDNDEG 4416

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
             LG G       P  + SL+    V+V      T  L
Sbjct: 4417 QLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 128  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4095 GHNHRGQLGGLDGSRIKNPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4150

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4151 GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4210

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            G+      P+ + SL     V +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4211 GNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD---SED 4267

Query: 305  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4268 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4327

Query: 363  I 363
            I
Sbjct: 4328 I 4328



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 7/233 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L S+  V+S GS   G LGHG  + + +  TRI   +   V  V    +++A +
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELP-TRIAALADRQVTGVFCGSSYSAAI 676

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 123
             SG+++T G  +    GH ++    + P LV ALK      V  G      L  T  G 
Sbjct: 677 TASGELYTWGRGTYGRLGHGNSEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
               G    G+LG+   +    P  +  L +   VV++ +G  + +A+T  G VY++G G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQV-DLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
               LGHG       P+ +Q    +G  +V ++ G  H +AL +SG +Y WG+
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQAL--EGKKIVDLAVGLAHCLALTASGELYGWGR 845



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 7/156 (4%)

Query: 212 VVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           +V+++A  E  HV+AL SSG VY+WG G  G LGHGD   K LP  +++L       V  
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFC 668

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--Y 327
               +  +  +G +Y +G   +G LG    G S+    P ++ +L+AH V  ++ G    
Sbjct: 669 GSSYSAAITASGELYTWGRGTYGRLG---HGNSEDKYVPTLVTALKAHRVVHVALGCGDA 725

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           H++ VT+ G  F +GD +  +LG+++  G   P ++
Sbjct: 726 HSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQV 761


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   +Q++  E     V   G++++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4025 SALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4083

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  +V IA G 
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGV-EIVDIACGG 4142

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4143 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4202

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4203 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYT 4262

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4263 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4319

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 4320 EGQLGDGTTSALHRP 4334



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 67   QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
            Q   V+  G N     G    ++ I  P   E L  +    +  G      ++  G ++ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 127  CGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            CG  T+G+LG GD  +   PK+I  L + V   V + +G  + LA+T +G V+S+G G +
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
              LGHG      +P+ I+  + K I    ++ G  H  A+ S+G +YTWG G  G LGHG
Sbjct: 3129 GKLGHGNCISLDKPKLIEVLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHG 3186

Query: 246  DEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            D I +T P+ + +L  H  VQV   +R  +T  L   G VY +G   FG LG   RG SD
Sbjct: 3187 DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG---RGGSD 3243

Query: 304  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3244 GCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3301



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 13/311 (4%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
             V Q G+++ CG+ ++   G  D N  +  P+ +  L     K+V   +G      LT  
Sbjct: 3059 IVSQEGKLYACGEGTNGRLGLGDDNN-MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 3117

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G V + G    G+LGHG+ +    PK I  L+    +  IA G  +  A+  NG +Y++G
Sbjct: 3118 GKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKS-KRIRDIACGSGHSAAIASNGELYTWG 3176

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYC 239
             G    LGHG+   + +P+ +Q     G  VV+V+ G  D   +AL + GYVY+WG G  
Sbjct: 3177 LGEYGRLGHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDF 3234

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G       P  +  L +   +QV    + +  L   G V+ +G   +  LG    
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG---H 3291

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            G    V +P +++ LR   +  ++ G  H + VTD G+++ +GDN+  Q G+ T     +
Sbjct: 3292 GNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351

Query: 360  PTEIFIQEMEE 370
            P+   + ++E+
Sbjct: 3352 PS--LVHDLED 3360



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 179
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G +YS
Sbjct: 3994 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD 4110

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LGHG+++    P+ +  L     V +      +  +   G +Y +G   +G LG  D 
Sbjct: 4111 GKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4169

Query: 300  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4170 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227

Query: 358  LEPTEI 363
              P +I
Sbjct: 4228 KVPLKI 4233



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 149/318 (46%), Gaps = 14/318 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3066 LYACGEGTNGRLGLGDDNNMC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3124

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3125 EGEDGKLGHGNC-ISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3183

Query: 136  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT+ +  PK +  L  +G  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3184 GHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG 3241

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  +   R   + V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3242 SDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3299

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3300 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3356

Query: 313  SLRAHHVSQISTGLYHTV 330
             L    V+++S G  H++
Sbjct: 3357 DLEDARVNRVSCGSSHSI 3374



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 18/324 (5%)

Query: 14   SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 69
            ++  ++S G    G LG G   T  V    +   S  HV    V VS+   H   +   G
Sbjct: 4044 ADGKIYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 70   QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
             V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T G
Sbjct: 4101 HVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNF 186
               +G+LGHGD+ D+  PK +  L++   V+ +A  +G +  L VT +  V+S+G G   
Sbjct: 4159 KGRYGRLGHGDSDDQLRPKVVEALQDY-KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYG 4217

Query: 187  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
             LG G       P  I +    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG 
Sbjct: 4218 KLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275

Query: 247  EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            +     P  +++L+    + +           D G V+ +G    G LG    G +  + 
Sbjct: 4276 DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSALH 4332

Query: 307  RPRILDSLRAHHVSQISTGLYHTV 330
            RPR++ +L+   +++++ G  HT+
Sbjct: 4333 RPRLVHALQGKKITRVACGSAHTL 4356



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G+   G+LGHGDT+    PK I  L E  +++ IA G +Y  A++ NG +
Sbjct: 583 LTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLE-KNIIFIACGSTYSAALSANGEL 641

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 642 YTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 701

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG-- 759

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + V  P++++SLR   V  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 760 -HGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 3108 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEVLKSKRIRDIACGSGHS 3163

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALIGHRVVQVACGSRDAQTMALTT 3222

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G+V++ G    G+LG G +    TP  +  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 3223 DGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTW 3281

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 3282 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 3340 QQGNGTTSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 3385

Query: 301  VSDKVLRPRILDSL 314
              D V  P + D L
Sbjct: 3386 NQDPVTFPTVRDPL 3399



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           A   H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++ 
Sbjct: 575 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-ISYDEPKLIEALLEKNIIFIACGSTYSA 633

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 174
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 634 ALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 692

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 693 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTW 750

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
              D  +   +  P +  +L +  V  +++G
Sbjct: 811 ---DPTLGPIISEPTLCPTLSSKTVIGLASG 838



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 62
           G+++  L  +  V+S G+   G LGHG      +S+       A    +++ ++    ++
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHG----DTISYDEPKLIEALLEKNIIFIACGSTYS 632

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
           A +  +G+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T 
Sbjct: 633 AALSANGELYTWGRGNYGRLGHGNFD-DVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVYTW 750

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G  + LGHG +     P+ I++ R +   V  +S G  H++AL    +VY WG+   G
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR--KVKDLSVGTTHILALTEDQFVYGWGRNDYG 808

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 288
                 +ID TL   +S         +C     KT + + +G    F W
Sbjct: 809 ------QIDPTLGPIISE------PTLCPTLSSKTVIGLASGPTQSFAW 845



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 13/245 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L S   V+S G    G LGHG +    VS+ R   I       +V ++   +H+
Sbjct: 4090 GKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSYDRPKLIEDLLGVEIVDIACGGHHS 4145

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TI 120
            A +  +G ++T G       GH D++  + RP++VEAL+      V  G      L  T 
Sbjct: 4146 AAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTLCVTD 4204

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY++
Sbjct: 4205 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VVKVECGSQFSVALTRSGAVYTW 4263

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG    G
Sbjct: 4264 GKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVFTWGDNDEG 4321

Query: 241  ALGHG 245
             LG G
Sbjct: 4322 QLGDG 4326



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 514 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 562

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD I    P+ + +L     
Sbjct: 563 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNI 622

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 323
           + +      +  L   G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 623 IFIACGSTYSAALSANGELYTWGRGNYGRLG---HGNFDDVMTPTLVTTLKGHTVVHVAC 679

Query: 324 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 680 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 717



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3984 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 4043

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 336
              G +Y  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 4044 ADGKIYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ +  +LGH
Sbjct: 4101 HVYSWGEGDDGKLGH 4115


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 273
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 273
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 158/343 (46%), Gaps = 21/343 (6%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 11  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK---KPDQVGALDA 67

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 68  QTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQV 126

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    +YS+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--AGIPFAHIAAGGG 184

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE 244

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 245 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 301

Query: 340 GFGDNERAQLGHD---------TLRGCLEPTEIFIQEMEEDTG 373
            FG     QLG           T++G     E ++Q + E  G
Sbjct: 302 SFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANG 344



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RKKPDQVG 63

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L +  ++V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 64  AL-DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY--D 120

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     +Y+WG+   G LG G EI K + P  + SL       + 
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDE--TDRS-APALLKSLRSQKIIHICCGEDH 237

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 238 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 273



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 28  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKP---DQVGALDAQTIVAVSCGEAHTLALN 84

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+    +++
Sbjct: 85  DKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYS 144

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G  + + + P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGI-PFAHIAAGGGHSFALTMSGAIFGWGRNKF 203

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 204 GQLGLNDETDRSAPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 261

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 262 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3815 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 3873

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 164
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 3931

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 3991

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 3992 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4051

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4052 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4108

Query: 345  ERAQLGHDTLRGCLEP 360
            +  QLG  T      P
Sbjct: 4109 DEGQLGDGTTSALQRP 4124



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 91   IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 2870

Query: 151  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 2871 FLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 2930

Query: 210  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 268
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 2931 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIAC 2988

Query: 269  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 2989 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3045

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3046 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3079



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2844 LYACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 2902

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 2903 EGEDGKLGHGNS-ISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 2961

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT  +  PK +  L  VG  V+QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 2962 GHGDTATQSKPKLVQSL--VGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3019

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3020 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3077

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3078 PTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3134

Query: 313  SLRAHHVSQISTGLYHTV--VVTDR 335
             L    V+++S G  H++  V+TD+
Sbjct: 3135 ELDDARVNRVSCGSSHSIAWVLTDQ 3159



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 20/335 (5%)

Query: 5    TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 58
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3823 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 3879

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 117
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 3880 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 175
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   V+ +A  +G +  L VT + 
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY-KVIDVACGSGDAQTLCVTDDD 3996

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWG
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYTWG 4054

Query: 236  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            KG    LGHG +     P  +++L+    + +           D G V+ +G    G LG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114

Query: 296  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4115 ---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4146



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 17/322 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2809 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 2867

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
             +  L     K+V   +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 2868 PIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 2927

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+    G  V+
Sbjct: 2928 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSL--VGQRVI 2984

Query: 214  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +++ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 2985 QIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3044

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3045 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3101

Query: 332  VTDRGRLFGFGDNERAQLGHDT 353
            VTD G+++ +GDN+  Q G+ T
Sbjct: 3102 VTDIGQVYAWGDNDHGQQGNGT 3123



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2848

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 2909 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 2968

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              K   P+++ SL    V QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2969 QSK---PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3025

Query: 360  PTEI 363
            P  I
Sbjct: 3026 PLLI 3029



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3839

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 3959

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 3960 ---SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4016

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4017 CKIPMKI 4023



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 2886 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 2942 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3059

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+   G VY WG    G
Sbjct: 3060 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG 3117

Query: 241  ALGHGDEIDKTLP 253
              G+G  I    P
Sbjct: 3118 QQGNGTTIVNKKP 3130



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 31/266 (11%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L  ++SV+S G+  CG LGHG       P+  + +    I F        ++
Sbjct: 509 SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITF--------IA 560

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG---LN 113
               ++A +  +G+++T G  +    GH ++++ +  P LV AL G     V  G     
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T  +T  G V + G   HG+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGQQFSAALTA 679

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            G VY++G G ++ LGHG +     P+ I   + K I  + +  G  HV+AL     VY 
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLVYG 737

Query: 234 WGKGYCGALGHGDEIDKTL----PEP 255
           WG+       HG +ID  L    PEP
Sbjct: 738 WGRN-----DHG-QIDPALGTIVPEP 757



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 10/236 (4%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT    V++ G+   G+LGHG+      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 517 LTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 575

Query: 178 YSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYT 233
           Y++G G+   LGHG    D + P  +      G  VV V+ G   D   + + +SG V++
Sbjct: 576 YTWGRGNYGKLGHGNSDKDVMIPTLVTAL--NGHMVVYVACGGGRDPQTLCVTASGIVFS 633

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G  G LG G       P+ +  L      +V   ++ +  L   G VY +G      
Sbjct: 634 WGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYK 693

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           LG    G  D V  P+I+D L+   +  +  G  H + +T+   ++G+G N+  Q+
Sbjct: 694 LG---HGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQI 746



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L +S+   V+S G    G LGHG      +S+ R   I       +V ++  
Sbjct: 3876 VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSYDRPKLIEELLGTEIVDIACG 3931

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D+   +  P+L+EAL+      V  G      L
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIEALQDYKVIDVACGSGDAQTL 3990

Query: 119  --TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              T   +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 3991 CVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGSQFSVALTRSGA 4049

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            +Y++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4050 IYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACTDKGEVFTWGD 4107

Query: 237  GYCGALGHG 245
               G LG G
Sbjct: 4108 NDEGQLGDG 4116



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 8/231 (3%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   + Q   V++ G+      GH +       P+L+EAL       +  G  ++  L+ 
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTW-YDEPKLIEALVEKNITFIACGSTYSAALSS 571

Query: 121 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNGV 176
            G ++T G   +G+LGHG++  D   P  +  L     VV +A G       L VT +G+
Sbjct: 572 NGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNG-HMVVYVACGGGRDPQTLCVTASGI 630

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+S+G G++  LG G       P+ +       I+V +V  G +   AL + G VYTWGK
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGQQFSAALTAYGEVYTWGK 688

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G    LGHG+E     P+ +  LK+     +         L +   VYG+G
Sbjct: 689 GEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 21/215 (9%)

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
           T + P+P     + E+G + Q+      ++ ++ NG VY    GS             + 
Sbjct: 446 TFNGPSPVYYDTISELG-IKQLCCTERAVIILSVNGNVYMMYYGS-------------ET 491

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           + +  F  K I ++   +   H +AL     VY+WG G CG LGHG+      P+ + +L
Sbjct: 492 QRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEAL 551

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHH 318
                  +      +  L   G +Y +G   +G LG    G SDK V+ P ++ +L  H 
Sbjct: 552 VEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLG---HGNSDKDVMIPTLVTALNGHM 608

Query: 319 VSQISTG---LYHTVVVTDRGRLFGFGDNERAQLG 350
           V  ++ G      T+ VT  G +F +GD    +LG
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLG 643


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRL-----VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +N     GH     P  RPR+     + +L+      ++ G   +  LT  G V + GSN
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSN 121

Query: 131 THGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
             GQLGH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG
Sbjct: 122 AVGQLGHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 190 HGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G   +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D  
Sbjct: 181 IGTTSEKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            +  P  L +L+S     +      +  L + G V+  G   FG LG    G     + P
Sbjct: 239 SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVP 295

Query: 309 RILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 350
           R +  L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 RKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 338



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 11/303 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQ 54
           +++  G  HTL ++    +++CG++  G LGH  +T      +   F R+       +  
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITC 98

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G   
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
              LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ 
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSK 217

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G ++ +G  +   LG  + +    P  ++T R  G+  +  S GD+  V L + G V+T
Sbjct: 218 SGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYI--SCGDDFSVFLTNEGGVFT 275

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFG 292
            G G  G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGFG  G G
Sbjct: 276 CGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 293 SLG 295
            LG
Sbjct: 336 QLG 338



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 14/282 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP--- 146
           +  PR ++  +     +V  G + T FLT  G ++ CG+N HGQLGH  DTL    P   
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMS 83

Query: 147 --KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQ 203
             K +  LE    +  I+ G ++ LA+T  G V+S+GS +   LGH  E   +  PR I+
Sbjct: 84  RFKRLTSLENY-IITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIK 142

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSH 262
               K  HVV++++G  H +AL ++G +Y WG    G LG G   +K  +P  + SL   
Sbjct: 143 AIGAK--HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV 200

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
               +      +F +  +G+++G+G   FG LG  D    +    P  L +LR+  V  I
Sbjct: 201 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---NSRCYPTQLRTLRSLGVRYI 257

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           S G   +V +T+ G +F  G     QLGH +    + P ++F
Sbjct: 258 SCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF 299



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 277

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 278 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 241 ALGHG 245
            LG G
Sbjct: 336 QLGIG 340



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 12/248 (4%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 182 SGSNFCLGHG-EQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +  +  LGH  +     +PR +  F+R    +   +  +S G  H +AL + G V++WG 
Sbjct: 62  NNDHGQLGHDLDTLPNKRPR-MSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 237 GYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
              G LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
                 S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L 
Sbjct: 181 IGT--TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 356 GCLEPTEI 363
               PT++
Sbjct: 239 SRCYPTQL 246



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 205 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP-TQLRTLRSLGVRYISCGDDF 263

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG  +    GH   +  I  PR V  L G    Q+  G   T  F+  
Sbjct: 264 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPS 322

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG ++  G    GQLG G   +  TP+ +
Sbjct: 323 RGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 174/389 (44%), Gaps = 49/389 (12%)

Query: 3   ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           I  GR HTL + +  V+SCGS+  G LGH    ++     R++      + Q++  E H+
Sbjct: 129 IACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKP---ERVDALEPYTITQIACGETHS 185

Query: 63  AFVLQSGQVFTCGDNSSFCCG---HRDTNRP----------------------------- 90
             +  +GQVF  GDN +   G      + +P                             
Sbjct: 186 LALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMD 245

Query: 91  -IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
            + RPRLV AL G    Q+  G NF+  L+ RG V   G NT GQL   +    P P  +
Sbjct: 246 FMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV 305

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             L  +  + Q+AAG  + LA+T NG VYS+G+     LG G+      P  ++T   + 
Sbjct: 306 KELYGI-PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ- 363

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C 268
                ++ G++H V L  +G VY++G G  G LGHG   ++  P  +  L    A QV C
Sbjct: 364 -FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLC 422

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK--VLRPRILDSLRAHHVSQISTGL 326
            R+        T  +Y FG  G G LG    GV  +  VL P ++  L A  + +I+TG 
Sbjct: 423 GRRHTIVFFPKTNKIYAFGLGGNGQLG-TGVGVEPQQHVLTPMLVRVLDATPILRIATGA 481

Query: 327 YHT---VVVTDRGRLFGFGDNERAQLGHD 352
             +    VV +R  +   G  E AQL  D
Sbjct: 482 SASHCFAVVGNRNHV---GAAESAQLPWD 507



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 144/346 (41%), Gaps = 54/346 (15%)

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVP----CKQVTAGLNF 114
           AA    +G V+  G+ +    G R TN     +  P  +EA   V        +  G   
Sbjct: 76  AAHAQLAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAH 135

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T FL + G V++CGSN  GQLGH     R  P+ +  LE   ++ QIA G ++ LA+T N
Sbjct: 136 TLFL-VDGQVYSCGSNDQGQLGHKK--HRSKPERVDALEPY-TITQIACGETHSLALTSN 191

Query: 175 GVVYSFGSGSNFCLGHGEQH----------------------DEL------------QPR 200
           G V+++G      LG                           DEL            +PR
Sbjct: 192 GQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPR 251

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSS 258
            ++     G  +V++  G    + L   G V+ WG    G L   +   KT+P P  +  
Sbjct: 252 LVRAL--TGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL--KTVPVPTLVKE 307

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L      Q+ A  R T  L   G VY +G   FG LG  D         P  L +L    
Sbjct: 308 LYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTI---PSRLKTLEHQF 364

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            + I+ G  H+VV+T+ G ++ FG   + QLGH TL+  + P  IF
Sbjct: 365 CAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIF 410


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 20/277 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     +V 
Sbjct: 491 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIVH 542

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 600

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 601 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 660

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 754



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F +   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 484 FIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 539

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 540 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 598

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 599 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 656

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 657 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 716

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 717 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 773

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 774 GCGARGQLG 782



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 497 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 553

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 554 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 613

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 614 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 672

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 673 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 730

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 731 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 782



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 541 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 599

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 600 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 659

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 660 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 718

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 719 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
             G LG G   +   P P+    +  + Q+ AR
Sbjct: 777 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 809


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 341
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGHG   ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHGREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G +   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 142/292 (48%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGHG E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G D   + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G+    +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVIQPRLVEAMASTTVDFVACG 339

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAVVEV 456

Query: 226 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    SS  ++TWG G    LGHGD+  +  P  +S L      ++      T  L
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGHSLTVGL 516

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
             +G V+  G   +G LG P    SD  +   + D L    V +I+ G YH  V+T +  
Sbjct: 517 TTSGEVFTMGSSVYGQLGNPQ---SDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNE 573

Query: 338 LFGFGDNERAQLGHDTLRGCLEPT 361
           ++ +G     +LGH  +     PT
Sbjct: 574 VYTWGKGANGRLGHGDVEDRKTPT 597



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAV 453

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                           + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLID-SNFHRIACGHSL 512

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 612



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 21/296 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVE 326

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 261
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 262 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
               H A  V     ++   V +  ++ +G      LG  D+   D  L P  +  L   
Sbjct: 445 CGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDK---DARLEPTCVSLLIDS 501

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           +  +I+ G   TV +T  G +F  G +   QLG+    G   CL   ++  + +EE
Sbjct: 502 NFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEE 557



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           S ++FT GD      GH D +  +  P  V  L      ++ 
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL-EPTCVSLLIDSNFHRIA 507

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS+ +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQS-DGKVPCLVKDKLAGESVEEIACGAYHVA 566

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAICLHK 624

Query: 230 YVYTWGKGYCGA 241
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR 323

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2106 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 2281

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 2282 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 358  LEPTEI 363
             +PT I
Sbjct: 2341 RKPTVI 2346



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 45   NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 102
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2083 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2139

Query: 103  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2140 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 2198

Query: 161  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 218
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 2256

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 2257 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 2316

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 2317 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 2373

Query: 339  FGFGDNERAQLGHDT 353
            + +GDN+  Q G+ T
Sbjct: 2374 YAWGDNDHGQQGNGT 2388



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 150/310 (48%), Gaps = 7/310 (2%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 110
            VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+  V +
Sbjct: 3067 VQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKKIAVNS 3125

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G ++  A
Sbjct: 3126 GGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGGAHSAA 3184

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +     
Sbjct: 3185 ITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 3244

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY +G   
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 3304

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+  QLG
Sbjct: 3305 YHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG 3361

Query: 351  HDTLRGCLEP 360
             DT      P
Sbjct: 3362 DDTTNAIQRP 3371



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 74
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2109 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 75   GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 2167 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 2224

Query: 134  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 190
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 2225 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 2282

Query: 191  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 2283 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 251  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 2341 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 2397

Query: 311  LDSLRAHHVSQISTGLYHTVVVT 333
            +  L   H+++++ G  H++  T
Sbjct: 2398 VHGLEDVHINRVACGSSHSIAWT 2420



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 10/240 (4%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            P+L+EAL+G     +  G   +  +T  G ++T G   +G+LGHGD+ D+  PK I  L 
Sbjct: 3161 PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL- 3219

Query: 154  EVG-SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
             VG  V+ +A  +G +  L +T +  V+S+G G    LG G       P+ I++    G+
Sbjct: 3220 -VGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGL 3276

Query: 211  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
             V++V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+    + +   
Sbjct: 3277 GVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATG 3336

Query: 271  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                    D G V+ +G    G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 3337 SLHCVACSDEGEVFTWGDNDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            + IA G   +  V+  G +Y+ G G+N  LG G  ++   PR I    +  I  V V +G
Sbjct: 2091 IHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSG 2150

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
             +H +AL   G V++WG+G  G LGHG+ ++   P+ + +L+S     +      +  + 
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRG 336
             +G +Y +G   +G LG  D       L+P+++ SL  H + Q++ G     T+ +TD G
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEG 2267

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +F +GD +  +LG     GC  P  I
Sbjct: 2268 WVFSWGDGDFGKLGRGGSEGCNIPHNI 2294



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3086

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3147 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 3206

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3207 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3263

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3264 CKVPKKI 3270



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 58
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 2202

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 116
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 2203 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 2261

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 2262 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 2320

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 2321 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 2378

Query: 237  GYCGALGHGDEIDKTLP 253
               G  G+G  I    P
Sbjct: 2379 NDHGQQGNGTTIVNRKP 2395



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 19/291 (6%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + + +G  H L +S ++ V+S G    G LGHG     C +   I       ++ ++   
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPKLIEALQGYEIIDIACGG 3179

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             H+A +  +GQ++T G       GH D+   + +P+L+E L G     V  G      L 
Sbjct: 3180 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELVGYKVIDVACGSGDAQTLC 3238

Query: 120  IRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            I    +V + G   +G+LG G +     PK I  L  +G V+++  G  + +A+T +G V
Sbjct: 3239 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQFSVALTRSGSV 3297

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG  
Sbjct: 3298 YTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDEGEVFTWGDN 3355

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
              G L  GD+    +  P           V A + K    V  GS +   W
Sbjct: 3356 DEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVACGSAHTLAW 3395



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   G VY   
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA-- 3087

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++    ++ +G+ +
Sbjct: 3088 -TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LGH     C  P  I
Sbjct: 3147 DGKLGHGNRLACETPKLI 3164


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 109
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 465 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 522

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 581

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 227
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 582 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 639

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 640 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 700 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 756

Query: 348 QLGH 351
           Q G+
Sbjct: 757 QQGN 760



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 75
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1461 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1520 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1578

Query: 136  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 189
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1579 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1637

Query: 190  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1638 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1695

Query: 250  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1696 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1752

Query: 310  ILDSLRAHHVSQISTGLYHTV 330
            ++ +L+ HH+S +S G  HTV
Sbjct: 1753 LVAALQGHHISHVSCGSAHTV 1773



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 13   ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 68
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1404 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1458

Query: 69   GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1459 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 239
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1633

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1634 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1690

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1691 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1750

Query: 360  P 360
            P
Sbjct: 1751 P 1751



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 484 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 543

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 544 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 602

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 603 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 661

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 662 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 720 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 779

Query: 316 AHHVSQISTGLYHTVVVTD 334
              +++++ G  H++   D
Sbjct: 780 ---ITKLACGSSHSIAFAD 795



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1462

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1522

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1523 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1582

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 352
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1583 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1639

Query: 353  TLRGCLEPTEI 363
               GC  P  I
Sbjct: 1640 GSDGCKVPAII 1650



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 16/271 (5%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
            + +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+  
Sbjct: 1497 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATG 1554

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      L
Sbjct: 1555 GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQTL 1613

Query: 119  TI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAV 171
             I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA+
Sbjct: 1614 CITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLAL 1671

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            +  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G V
Sbjct: 1672 SKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGDV 1729

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
            YTWG    G +G G      +P  +++L+ H
Sbjct: 1730 YTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1760



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 525 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 583

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 584 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 642

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 181
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 643 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 757

Query: 242 LGHG 245
            G+G
Sbjct: 758 QGNG 761



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 490

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 491 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 549

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 550 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 606

Query: 304 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 607 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 666

Query: 362 EI 363
            +
Sbjct: 667 PV 668



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1397 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1456

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1457 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1513

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+    +LGH
Sbjct: 1514 EVYSWGEGVDGKLGH 1528



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            P +++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L 
Sbjct: 1647 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR 1706

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +  VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+ 
Sbjct: 1707 GM-KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHIS 1763

Query: 214  RVSAGDEHVVA 224
             VS G  H VA
Sbjct: 1764 HVSCGSAHTVA 1774


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 21/305 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA+ V + G+VFT G+ S  C GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 347

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  TH  G LGHG  +    PK IA PLE +  +  +A GP +   VT  G +
Sbjct: 348 AGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL-QIAFVACGPWHTALVTSTGQL 406

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSSTSI 464

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  +++L      ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTM 524

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLGNPQ---SDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 347 AQLGH 351
            +LGH
Sbjct: 582 GRLGH 586



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 27/230 (11%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  IA G  +   VT  G V+++G  S  CLGHG   + +QPR ++     
Sbjct: 271 PLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTST 330

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSH 262
            +  V  + G+ H  A+  +G +YTWG G    G LGHG ++   +P+    PL  L+  
Sbjct: 331 TVDFV--ACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQ-- 386

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           +A   C     T ++  TG ++ FG   FG LG  DR     V  PR ++SL       +
Sbjct: 387 IAFVACG-PWHTALVTSTGQLFTFGDGTFGVLGHGDR---QNVSYPREVESLLGLRTIAV 442

Query: 323 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           + G++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 443 ACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPT 492



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +H+  ++ +     +  G+   G+LGHG + +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 394 PWHTALVTSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +A L +  +  +IA G S 
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALID-SNFHKIACGHSL 511

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
              +T +G V++ GS     LG+ +   ++         R+ I    ++ G  HV  L S
Sbjct: 512 TAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIE--EIACGAYHVAVLTS 569

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 56/357 (15%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+     VF+ G    G LGHG       P   + ++ T ++F        V+  E
Sbjct: 288 RHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDF--------VACGE 339

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  V  +G+++T GD  +++   GH          R+   L+G+    V  G   T  
Sbjct: 340 FHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTAL 399

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++  +A G  +  AV      
Sbjct: 400 VTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA-VACGVWHTAAVVEVIAT 458

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   L+P  +        H  +++ G      L 
Sbjct: 459 HSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFH--KIACGHSLTAGLT 516

Query: 227 SSGYVYTWGKGYCGALGH-----------GDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
            SG V+T G    G LG+           GD+I +   E ++    H+A           
Sbjct: 517 KSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVA----------- 565

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           VL     VY +G    G LG  D  + D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 566 VLTSKNEVYTWGKGANGRLGHGD--IEDRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 23/238 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 47
           +  G +HT L++++  +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
             A VV+V A+  H++  + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSSTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVAALIDSNFHK 504

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +  G + T  LT  G V T GS  +GQLG+  + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQS-DGKVPCLVGDKIARESIEEIACGAYH 563

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 109
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 464 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 521

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 580

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 227
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 581 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 638

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 639 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 699 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 755

Query: 348 QLGH 351
           Q G+
Sbjct: 756 QQGN 759



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 75
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1460 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1519 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1577

Query: 136  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 189
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1578 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1636

Query: 190  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1637 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1694

Query: 250  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1695 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1751

Query: 310  ILDSLRAHHVSQISTGLYHTV 330
            ++ +L+ HH+S +S G  HTV
Sbjct: 1752 LVAALQGHHISHVSCGSAHTV 1772



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 13   ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 68
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1403 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1457

Query: 69   GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1458 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 239
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1632

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1633 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1689

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1690 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1749

Query: 360  P 360
            P
Sbjct: 1750 P 1750



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 483 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 542

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 543 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 601

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 602 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 660

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 661 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 719 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 778

Query: 316 AHHVSQISTGLYHTVVVTD 334
              +++++ G  H++   D
Sbjct: 779 ---ITKLACGSSHSIAFAD 794



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1461

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1521

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1522 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1581

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 352
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1582 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1638

Query: 353  TLRGCLEPTEI 363
               GC  P  I
Sbjct: 1639 GSDGCKVPAII 1649



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 16/271 (5%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
            + +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+  
Sbjct: 1496 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATG 1553

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      L
Sbjct: 1554 GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQTL 1612

Query: 119  TI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAV 171
             I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA+
Sbjct: 1613 CITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLAL 1670

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            +  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G V
Sbjct: 1671 SKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGDV 1728

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
            YTWG    G +G G      +P  +++L+ H
Sbjct: 1729 YTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1759



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 524 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 582

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 583 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 641

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 181
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 642 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 756

Query: 242 LGHG 245
            G+G
Sbjct: 757 QGNG 760



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 489

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 490 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 548

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 549 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 605

Query: 304 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 606 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 665

Query: 362 EI 363
            +
Sbjct: 666 PV 667



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1396 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1455

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1456 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1512

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+    +LGH
Sbjct: 1513 EVYSWGEGVDGKLGH 1527



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            P +++ L G     V  G  F+  L+  G V+T G   + +LGHG       PK I  L 
Sbjct: 1646 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR 1705

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +  VV+++ G  + +A   NG VY++G      +G G       PR +     +G H+ 
Sbjct: 1706 GM-KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHIS 1762

Query: 214  RVSAGDEHVVA 224
             VS G  H VA
Sbjct: 1763 HVSCGSAHTVA 1773


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 179
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2945 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 3120

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 3121 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 358  LEPTEI 363
             +PT I
Sbjct: 3180 RKPTVI 3185



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 45   NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 102
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2922 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2978

Query: 103  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2979 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 3037

Query: 161  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 218
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 3095

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 3096 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 3155

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 3156 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212

Query: 339  FGFGDNERAQLGHDT 353
            + +GDN+  Q G+ T
Sbjct: 3213 YAWGDNDHGQQGNGT 3227



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 150/310 (48%), Gaps = 7/310 (2%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 110
            VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+  V +
Sbjct: 3906 VQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKKIAVNS 3964

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G ++  A
Sbjct: 3965 GGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGGAHSAA 4023

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +     
Sbjct: 4024 ITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 4083

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY +G   
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4143

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+  QLG
Sbjct: 4144 YHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG 4200

Query: 351  HDTLRGCLEP 360
             DT      P
Sbjct: 4201 DDTTNAIQRP 4210



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 39/345 (11%)

Query: 28  VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 87
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 88  NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 144
                 P+ +  L G+   ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTGLSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 205 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 74
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2948 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005

Query: 75   GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 3006 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 3063

Query: 134  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 190
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 3064 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 3121

Query: 191  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 3122 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 251  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 3180 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 3236

Query: 311  LDSLRAHHVSQISTGLYHTVVVT 333
            +  L   H+++++ G  H++  T
Sbjct: 3237 VHGLEDVHINRVACGSSHSIAWT 3259



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 10/240 (4%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            P+L+EAL+G     +  G   +  +T  G ++T G   +G+LGHGD+ D+  PK I  L 
Sbjct: 4000 PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL- 4058

Query: 154  EVG-SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
             VG  V+ +A  +G +  L +T +  V+S+G G    LG G       P+ I++    G+
Sbjct: 4059 -VGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGL 4115

Query: 211  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
             V++V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+    + +   
Sbjct: 4116 GVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATG 4175

Query: 271  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                    D G V+ +G    G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 4176 SLHCVACSDEGEVFTWGDNDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            + IA G   +  V+  G +Y+ G G+N  LG G  ++   PR I    +  I  V V +G
Sbjct: 2930 IHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSG 2989

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
             +H +AL   G V++WG+G  G LGHG+ ++   P+ + +L+S     +      +  + 
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 3049

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRG 336
             +G +Y +G   +G LG  D       L+P+++ SL  H + Q++ G     T+ +TD G
Sbjct: 3050 SSGELYTWGLGEYGRLGHGDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEG 3106

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +F +GD +  +LG     GC  P  I
Sbjct: 3107 WVFSWGDGDFGKLGRGGSEGCNIPHNI 3133



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 123
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
              E+    P  + +LK    V VC    ++F   D
Sbjct: 759 DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3925

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3986 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 4045

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4046 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4102

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4103 CKVPKKI 4109



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 58
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 3041

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 116
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 3042 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 3100

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 3101 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 3159

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 3160 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 3217

Query: 237  GYCGALGHGDEIDKTLP 253
               G  G+G  I    P
Sbjct: 3218 NDHGQQGNGTTIVNRKP 3234



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 19/291 (6%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + + +G  H L +S ++ V+S G    G LGHG     C +   I       ++ ++   
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPKLIEALQGYEIIDIACGG 4018

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             H+A +  +GQ++T G       GH D+   + +P+L+E L G     V  G      L 
Sbjct: 4019 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELVGYKVIDVACGSGDAQTLC 4077

Query: 120  IRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            I    +V + G   +G+LG G +     PK I  L  +G V+++  G  + +A+T +G V
Sbjct: 4078 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQFSVALTRSGSV 4136

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG  
Sbjct: 4137 YTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDEGEVFTWGDN 4194

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
              G L  GD+    +  P           V A + K    V  GS +   W
Sbjct: 4195 DEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVACGSAHTLAW 4234



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   G VY   
Sbjct: 3869 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA-- 3926

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++    ++ +G+ +
Sbjct: 3927 -TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LGH     C  P  I
Sbjct: 3986 DGKLGHGNRLACETPKLI 4003


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 28/346 (8%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           L  N  V+S G +  G+LGH    +       RI       + Q+S  + H A V + G+
Sbjct: 97  LTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE 156

Query: 71  VFTCGDNSSFCCGHR------------------DTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+T G+      GH                   D  +    P+ +E+L  +  KQV  G+
Sbjct: 157 VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGI 216

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            FT  L+  G V+T G N +G LG+  D     TP+ I  L ++   V+I+AG S+  A+
Sbjct: 217 QFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI---VKISAGYSFCAAI 273

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T  G +Y++G+  N  LG+ +   + +P  +  F  +   +V VS GD  + AL   G +
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN-SIVDVSCGDNFIAALTQQGQL 332

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           YTWG G  G LGHG++ D   P  +   K  +    C      F+  D   +Y FG    
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHV-EFKQKIIKIACGGSHAAFITEDN-QLYQFGRGSE 390

Query: 292 GSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDR 335
           G LG      S+  +R  P ++   +   V  ++ G  HT+ +T  
Sbjct: 391 GQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 31/354 (8%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+S G    G LG   E       T I   +   + +V A ++ +  +  +G+V++ G N
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTP-TEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 78  SSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                GH D  +  + +P  +E L G   KQ++ G      +T  G V+T G+   G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 137 HGDTLDRPTPKSIA----------------PLEEVGSV--VQIAAGPSYMLAVTGNGVVY 178
           H + L +     I                  +E +G++   Q+A G  + + ++ +G VY
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVY 229

Query: 179 SFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +FG      LG+  +Q+    P+ I+        +V++SAG     A+   G +YTWG  
Sbjct: 230 TFGYNQYGSLGYVSDQNSVTTPQLIKDLN----DIVKISAGYSFCAAITKQGKLYTWGNN 285

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
             G LG+   + +T P  ++   S  + V V         L   G +Y +G+ G G LG 
Sbjct: 286 RNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLG- 344

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              G    +  PR ++      + +I+ G  H   +T+  +L+ FG     QLG
Sbjct: 345 --HGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLG 394



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 25/266 (9%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINF----------PS 48
           QI+ G++H   ++ +  V++ G+   G LGH  E    Q +   R N           P 
Sbjct: 140 QISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199

Query: 49  AAHVV------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
               +      QV+        + + G+V+T G N     G+      +  P+L++ L  
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND 259

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           +   +++AG +F   +T +G ++T G+N +GQLG+  +L +  P  +       S+V ++
Sbjct: 260 IV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G +++ A+T  G +Y++G G +  LGHG + D   PR ++ F++K   +++++ G  H 
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE-FKQK---IIKIACGGSHA 373

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEI 248
             +     +Y +G+G  G LG G  +
Sbjct: 374 AFITEDNQLYQFGRGSEGQLGIGQNV 399



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 34/302 (11%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSI 149
           + P  +E L     K+V AG + +  LT  G V++ G N  G LGH D L  +   P+ I
Sbjct: 71  YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERI 130

Query: 150 APLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--------------- 193
             L  +G  + QI+ G  +M AVT +G VY++G+     LGH E+               
Sbjct: 131 EKL--LGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLS 188

Query: 194 HDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEI 248
           HD LQ    P+ I++     I   +V+ G +  V L   G VYT+G    G+LG+  D+ 
Sbjct: 189 HDYLQDSMLPQKIESLGN--IKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQN 246

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
             T P+ +  L     V++ A       +   G +Y +G    G LG      S    +P
Sbjct: 247 SVTTPQLIKDLND--IVKISAGYSFCAAITKQGKLYTWGNNRNGQLG---NSQSLYQTKP 301

Query: 309 RILDSLRAHH-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQ 366
            I+    + + +  +S G      +T +G+L+ +G     QLGH        P  + F Q
Sbjct: 302 SIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ 361

Query: 367 EM 368
           ++
Sbjct: 362 KI 363



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           +VYS+G G    LG   +++   P  I+    K I   +V AG    +AL  +G VY+WG
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIK--KVEAGKSISMALTHNGEVYSWG 107

Query: 236 KGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           K   G LGH D +  + T PE +  L      Q+   +     + + G VY +G   FG 
Sbjct: 108 KNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGK 167

Query: 294 LGFPDRGVSDKVLR----------------PRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           LG  +    ++ ++                P+ ++SL      Q++ G+  TVV+++ G+
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGK 227

Query: 338 LFGFGDNERAQLGH 351
           ++ FG N+   LG+
Sbjct: 228 VYTFGYNQYGSLGY 241



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VY+WG G  G LG  +E +   P  +  L      +V A K  +  L   G VY +G   
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG  DR +S  + +P  ++ L    + QIS G +H   VT+ G ++ +G+ E  +LG
Sbjct: 111 GGILGHEDR-LSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 351 HD 352
           H+
Sbjct: 170 HE 171


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%), Gaps = 29/362 (8%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QVS    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           LG  DE ++  P  L +L++ L V+   C  +   F L + G V+  G   +G LG    
Sbjct: 230 LGLNDETNRAYPTQLKTLRT-LGVRFAACGDEFSVF-LTNEGGVFTCGAGAYGQLG---H 284

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCL 358
           G S   + PR++  L    ++Q++ G  HT+  V  RG+++ FG     QLG  + +  +
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLM 344

Query: 359 EP 360
            P
Sbjct: 345 LP 346



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q++ G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+     + GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--AACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T   V + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP+ I P     +V Q++ G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 241 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 360 PTEI 363
           PT++
Sbjct: 241 PTQL 244



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 15/262 (5%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 114
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPSYMLAVTG 173
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G  V+ AA G  + + +T 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG--VRFAACGDEFSVFLTN 267

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 232
            G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +A + S G VY
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLAFVPSRGKVY 325

Query: 233 TWGKGYCGALGHGDEIDKTLPE 254
            +G G  G LG        LP+
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  +    G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFAACGDEFSV 263

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSR 321

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 112 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 306

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 307 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 366

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 367 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 423

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G     +LGH  +     PT I
Sbjct: 424 SWGRGSNGRLGHGDVEDRKAPTLI 447



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 131 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 186

Query: 57  ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 187 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 246

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 171
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 247 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 305

Query: 172 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 363

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 283
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 364 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 422

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 423 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 468



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 113 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 170

Query: 253 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 310
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 171 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 228

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 229 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 281


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 112
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 231
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 232 YTWGKGYCGALGHGDEIDKTLPE 254
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 241 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 360 PTEI 363
           PT++
Sbjct: 241 PTQL 244



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 22/321 (6%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           ++    HA  V + GQ+F+ G++S    GH   +  + +P++++AL       V  G   
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGH-GADADVSQPKVIDALSESNVVLVACGEFH 361

Query: 115 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           T  +T+ G+++T G +TH  G LGHG  +    P+ +    E   +  ++ GP +  AV+
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVS 421

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------- 224
             G +++FG G+   LGHG++    +PR +++   KG+  ++VS G  H  A        
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--KGLRTLKVSCGIWHTAAVIDFINES 479

Query: 225 --LDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             LD+S  G ++TWG G  G LGHGDE  + +P  +S        QV      T  L   
Sbjct: 480 DRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAG--VCQVACAHSMTIALTVL 537

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G VY  G   +G LG P    S   L       +R  H+ QI+ G +H V ++  G ++ 
Sbjct: 538 GQVYTMGAADYGQLGSP---CSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYT 594

Query: 341 FGDNERAQLGHDTLRGCLEPT 361
           +G     QLGH  ++    PT
Sbjct: 595 WGKGINGQLGHGDIKDRHTPT 615



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ S ++++ G      G LGHG   +  +    I    +  +  VS   
Sbjct: 355 VACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGP 414

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
            H A V   G++FT GD +    GH D +    +PR VE+LKG+   +V+ G+  T  + 
Sbjct: 415 WHTAAVSSQGKLFTFGDGTFGALGHGDRSS-TSKPREVESLKGLRTLKVSCGIWHTAAVI 473

Query: 119 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                      ++ G + T G+   GQLGHGD   R  P  ++       V Q+A   S 
Sbjct: 474 DFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS---MPAGVCQVACAHSM 530

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A+T  G VY+ G+     LG      +L        R    H+ +++ G  HVVAL S
Sbjct: 531 TIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIR--NCHIKQIACGSHHVVALSS 588

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +G VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 589 NGDVYTWGKGINGQLGHGDIKDRHTPTLVKALK 621



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 30/282 (10%)

Query: 90  PIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 144
           PI R     P+ ++ +  +  + +  G      +T +G + + G ++ G+LGHG   D  
Sbjct: 280 PIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS 339

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAI 202
            PK I  L E  +VV +A G  +  AVT +G +Y++G  ++    LGHG       PR +
Sbjct: 340 QPKVIDALSE-SNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
              + + + +  VS G  H  A+ S G ++T+G G  GALGHGD    + P  + SLK  
Sbjct: 399 -IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGL 457

Query: 263 LAVQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             ++V      T  ++D            +G ++ +G    G LG  D         PR+
Sbjct: 458 RTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDE-------EPRL 510

Query: 311 LDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           + S  +    V Q++     T+ +T  G+++  G  +  QLG
Sbjct: 511 VPSCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLG 552



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)

Query: 171 VTGNGVVYSFGSG-SNFCLGHGE---------QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           V G G V   G G SN  LG            + D L P+A+   R   +    ++ G +
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALD--RIAALDAQIIACGSK 308

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H V +   G +++WG+   G LGHG + D + P+ + +L     V V   +  T  +  +
Sbjct: 309 HAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVS 368

Query: 281 GSVYGF-------GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G++Y +       G++G GS       VS  + R  ++  + +  +S +S G +HT  V+
Sbjct: 369 GNLYTWGDDTHNTGYLGHGS------AVSHWIPR-EVIGQIESVRISFVSCGPWHTAAVS 421

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +G+LF FGD     LGH       +P E+
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREV 451


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 112
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 231
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 232 YTWGKGYCGALGHGDEIDKTLPE 254
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 241 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 360 PTEI 363
           PT++
Sbjct: 241 PTQL 244



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHVREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 112 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 224
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 225 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 277 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 119 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G VY+ GS     LG     + + P  ++ +      V  +S G  HV  L 
Sbjct: 543 MTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDST-VEEISCGSHHVAVLT 600

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLP 253
           S   VYTWGKG  G LGHGD  +K  P
Sbjct: 601 SRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 62  AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 163
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 224 ALDSSGYVYTWG 235
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 7/354 (1%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
             ++VF  G +    LG GP+ ++    T  +  SA   VQ+         V Q G+V+ C
Sbjct: 3463 QTNVFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYAC 3521

Query: 75   GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 132
            G+ ++   G   T   +  PR + +L     K+V   +G   +  LT  G V + G    
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 133  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            G+LGH    +   P+ I  L+    V  IA G S+  A+T NG +Y++G G    LGHG+
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKS-KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
               +L+P+ ++    + +  V   + D   +AL   G VY+WG G  G LG G      +
Sbjct: 3641 NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV 3700

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+     Q+    + +  L  +G V+ +G   +  LG    G    V +P+I++
Sbjct: 3701 PHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLG---HGTDAHVRKPQIVE 3757

Query: 313  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
             L+   +  ++ G  H + VTD G++F +GDN+  Q G+ T     +P  + ++
Sbjct: 3758 GLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLE 3811



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 124/246 (50%), Gaps = 4/246 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V + G+   G+LGHGD  +   P  I  L     V +I  G SY +A+T NG V
Sbjct: 634 LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSG-KQVAKICCGSSYSVALTSNGEV 692

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           YS+G G+   LGHG   D+  P  ++ F+   I  V   +GD   +A+  SG VY+WG G
Sbjct: 693 YSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDG 752

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L     V+V    + +  L  +G+VY +G      LG  
Sbjct: 753 DYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLG-- 810

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G  D    P+ +++L +  V  I+ G  H + +T+ G L+G+G NE+ QLG+ ++   
Sbjct: 811 -HGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNF 869

Query: 358 LEPTEI 363
            EPT I
Sbjct: 870 TEPTLI 875



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 7/310 (2%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 110
            +Q+   E     V   G+VF  G  +    G   T   +  P  +E+++ V  K+  V +
Sbjct: 4497 IQLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTES-VSHPTQLESIQHVFIKKLAVNS 4555

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G      L+  G V++ G    G+LGHG+      P+ I  L     VV IAAG ++   
Sbjct: 4556 GGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRG-KEVVDIAAGGAHSAC 4614

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T NG +Y++G G    LGHG+  D+ +P+ ++  +   +  +   +GD   + +     
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V++WG G  G LG G      +P  + +L+    ++V    + +  L  +GSVY +G   
Sbjct: 4675 VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGD 4734

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +  LG    G  D V RPR + +L+   V  ++ G  H V  TD G +F +GDN+  QLG
Sbjct: 4735 YHRLG---HGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791

Query: 351  HDTLRGCLEP 360
              T      P
Sbjct: 4792 DGTTNAIQRP 4801



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 113/240 (47%), Gaps = 6/240 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G+VF+ G+      GH D       P L+  L G    ++  G +++  LT
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH-EEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 177
             G V++ G    G+LGHG + D+ TP  +    +   +V +A  +G +  LAVT +G V
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           YS+G G    LG G       P+ I+     G  VVRV  G++  +AL  SG VYTWGKG
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLM--GQDVVRVYCGNQFSMALTKSGAVYTWGKG 804

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
               LGHG E     P+ + +L S     +         + + G +YG+G    G LG P
Sbjct: 805 DNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNP 864



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 10/263 (3%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + + +G  H L +S    V+S G    G LGHG   + C     I+      VV ++A  
Sbjct: 4551 LAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRVIDSLRGKEVVDIAAGG 4609

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+A +  +G+++T G       GH D+ ++P  RP+LVEALK      +  G      L
Sbjct: 4610 AHSACITANGELYTWGKGRYGRLGHGDSEDQP--RPKLVEALKSYRVVDMACGSGDAQTL 4667

Query: 119  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L+  G V+++  G  + +A+T +G 
Sbjct: 4668 CITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG-VMKVECGSQFSVALTKSGS 4726

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +PR +   + K   V+ V+ G  H VA   +G V++WG 
Sbjct: 4727 VYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK--KVIDVACGSLHCVACTDTGEVFSWGD 4784

Query: 237  GYCGALGHGDEIDKTLPEPLSSL 259
               G LG G       P  ++SL
Sbjct: 4785 NDEGQLGDGTTNAIQRPRLVASL 4807



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G +   G N  GQLG  D      P S   L  V   +Q+  G   + AVT  G V++ G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALA-VTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G       P  +++ +   I  + V++G +H +AL + G VY+WG+G  G 
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D   
Sbjct: 4580 LGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD--- 4636

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+   RP+++++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4637 SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV 4696

Query: 360  PTEI 363
            P +I
Sbjct: 4697 PMKI 4700



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L ++  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN-CDKPRLIEALKSKRVRDIACGSSHSAAI 3619

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              +G ++T G       GH D N    +P+ V+AL      QV  G     T  LT  G 
Sbjct: 3620 TSNGDLYTWGLGEYGRLGHGD-NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK 3678

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LG G +     P  +  L +   V QI  G  + LA+T +G V+++G G
Sbjct: 3679 VYSWGDGDFGKLGRGGSEGCNVPHEVDRLRD-QKVCQIECGAQFSLALTKSGQVWTWGKG 3737

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++    KG  +V V+ G  H +A+  SG V+ WG    G  G
Sbjct: 3738 DYFRLGHGTDAHVRKPQIVEGL--KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3795

Query: 244  HG 245
            +G
Sbjct: 3796 NG 3797



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 9/279 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L S+  VFS G+   G LGHG +         I   S   V ++    +++  +
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVAL 686

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 123
             +G+V++ G  +    GH  ++     P L++  KG     V  G      L +   G 
Sbjct: 687 TSNGEVYSWGKGNFGRLGH-GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 182
           V++ G   +G+LG G      TPK I  L  +G  VV++  G  + +A+T +G VY++G 
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKL--MGQDVVRVYCGNQFSMALTKSGAVYTWGK 803

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G N+ LGHG +     P+ I+    K   V  ++ G  H +A+   G +Y WG+   G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSK--KVKDIAIGSLHCMAITEDGELYGWGRNEQGQL 861

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           G+    + T P  +  ++    + V     +TF     G
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 9/225 (4%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I SN  +++ G    G LGHG  TTQ +   ++   +   VVQV+     
Sbjct: 3609 IACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ-LKPKQVKALAHERVVQVACGSRD 3667

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G+V++ GD      G R  +     P  V+ L+     Q+  G  F+  LT
Sbjct: 3668 AQTLALTDEGKVYSWGDGDFGKLG-RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALT 3726

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG       P+ +  L+    +V +A G  + LAVT +G V++
Sbjct: 3727 KSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKG-KKIVHVAVGALHCLAVTDSGQVFA 3785

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +     +G  + +V+ G  H +A
Sbjct: 3786 WGDNDHGQQGNGTTTVNRKPALVVL---EGYKISKVACGSSHSIA 3827



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 10/212 (4%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M   +G   TL I++  +V+S G    G LG G  +  C    +I       V++V    
Sbjct: 4657 MACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-SDGCKVPMKIETLQGQGVMKVECGS 4715

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  + +SG V+T G       GH   +  + RPR V AL+      V  G       T
Sbjct: 4716 QFSVALTKSGSVYTWGKGDYHRLGHGSDDH-VRRPRKVSALQNKKVIDVACGSLHCVACT 4774

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 178
              G V + G N  GQLG G T     P+ +A L  +G  + ++A G ++ LA + N  V 
Sbjct: 4775 DTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASL--LGKKINRVACGSAHSLAWSTNKAVS 4832

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +    S+  +    +++ LQ   I   R + I
Sbjct: 4833 AGKLPSDIPM----EYNHLQNIPITALRNRLI 4860


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 165/342 (48%), Gaps = 19/342 (5%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            ++  G++  G LG G  E  Q ++ +RI +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            N     GH     P  RP  +  L+     Q+  G   +  L+  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 136 GHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           GH    D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG    +
Sbjct: 119 GHASDQDIVKLPKIVRNLVS-KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPN 177

Query: 195 DELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           D  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++ 
Sbjct: 178 DLQQSNTPMRLTTLL--GIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 252 LPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            P  L +L++ L V+   C  +   F+ ++ G V+  G   +G LG    G S   + PR
Sbjct: 236 YPTQLKTLRT-LGVRFVACGDEFSVFLTIE-GGVFTCGAGAYGQLG---HGFSSNEMLPR 290

Query: 310 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 350
           ++  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 291 MVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---QDYVITQIACGSR 96

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQVF+ GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC 156

Query: 121 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D     TP  +  L  +  V  IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAV 215

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L   G V+T G
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTCG 271

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG    G L
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331

Query: 295 G 295
           G
Sbjct: 332 G 332



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 10/245 (4%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  G+ +HGQLG G   +    TP  I P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRI-PWKPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V++WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 240 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSS 175

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                +   P  L +L    VS I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 359 EPTEI 363
            PT++
Sbjct: 236 YPTQL 240



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTIEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 112 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 224
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 225 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 277 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 119 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G VY+ GS     LG     + + P  ++ +      V  +S G  HV  L 
Sbjct: 543 MTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDST-VEEISCGSHHVAVLT 600

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLP 253
           S   VYTWGKG  G LGHGD  +K  P
Sbjct: 601 SRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 62  AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 163
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 224 ALDSSGYVYTWG 235
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 326

Query: 112 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 327 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 386

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 444

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 445 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 504

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 505 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 561

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G     +LGH  +     PT I
Sbjct: 562 SWGRGSNGRLGHGDVEDRKAPTLI 585



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 269 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 324

Query: 57  ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 325 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 384

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 171
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 385 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 443

Query: 172 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 501

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 283
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 502 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 560

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 561 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 606



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 251 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 308

Query: 253 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 310
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 309 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 366

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 367 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 419


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 157/327 (48%), Gaps = 28/327 (8%)

Query: 46  FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVMHPKLIDA 358

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 156
           L     + V  G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE + 
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI- 417

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
            V  I+ GP +   VT  G +++FG G+   LGHG++     P+ +++   KG+  V+ +
Sbjct: 418 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL--KGLRTVQAA 475

Query: 217 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L     
Sbjct: 476 CGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 535

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
            QV      T     +G VY  G   +G LG P   ++D  L  R+   L    V +I+ 
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNP---LADGKLPTRVEGKLSKSFVEEIAC 592

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G YH  V+T +  ++ +G     +LGH
Sbjct: 593 GAYHVAVLTSKTEVYTWGKGANGRLGH 619



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 425

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  + I  P+ VE+LKG+   Q   G+  T  +
Sbjct: 426 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSISLPKEVESLKGLRTVQAACGVWHTAAV 484

Query: 119 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 485 IEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 543

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A T +G VY+ GS     LG+     +L  R      +    V  ++ G  HV  L 
Sbjct: 544 LTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKS--FVEEIACGAYHVAVLT 601

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 602 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 635



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP+ + SLK    VQ     
Sbjct: 419 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGV 478

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +++             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 479 WHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 535

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
            Q++ G   TV  T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEI 590



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    GVLGHG    + +S  + +        VQ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRTVQAACGVW 479

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 480 HTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 538

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T   T  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 539 ACGHSLTVARTTSGHVYTMGSPVYGQLGN-PLADGKLPTRVEGKLSKSFVEEIACGAYHV 597

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 598 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 642



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 9   HTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAF 64
           H+L ++ ++   V++ GS + G LG+     +    TR+    S + V +++    H A 
Sbjct: 542 HSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLP--TRVEGKLSKSFVEEIACGAYHVAV 599

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +    +V+T G  ++   GH DT+     P LVEALK    K +  G +FT  + +   V
Sbjct: 600 LTSKTEVYTWGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWV 658


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+LV+ LK    + V  G
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVLHPKLVDGLKNTNVELVACG 365

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              +  +T+ G ++T G ++H  G LG+ +      PK +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGI-HVAAVSCGPWHT 424

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESL--KGLRTVRAACGVWHTAAVVEV 482

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVA 542

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  TG VY  G   +G LG P    +D  L  R+   L  + V ++  G YH  V+T R 
Sbjct: 543 LTTTGHVYTMGSPVYGQLGNPQ---ADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRT 599

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S  +++ G S   CG+LG+  E +  V   ++N P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP-KKLNGPLEGIHVAAVSCG 420

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  SGQ+FT GD +    GH D  R +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RRSVSTPREVESLKGLRTVRAACGVWHTAAV 479

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVE-PNFCQVACGHS 538

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G VY+ GS     LG+ +   +L  R      +    V  +  G  HV  L 
Sbjct: 539 MTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKN--FVEELDCGAYHVAVLT 596

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALK 630



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 24/346 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  GR H  L++    VFS G  L G LGHG + +  +    ++     +V  V+  E H
Sbjct: 310 IACGRRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVLHPKLVDGLKNTNVELVACGEYH 368

Query: 62  AAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  V  SG ++T G +S  C   G+R+        +L   L+G+    V+ G   T  +T
Sbjct: 369 SCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVT 428

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSY 167
             G + T G  T G LGHGD     TP+ +  L+               +VV++  G S 
Sbjct: 429 SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVG-SS 487

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
             +   +G ++++G G    LGHG++   L P  +        +  +V+ G    VAL +
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP--NFCQVACGHSMTVALTT 545

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +G+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +
Sbjct: 546 TGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTW 604

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G    G LG  D   +D    P I+++L+   V  +  G   T  +
Sbjct: 605 GKGANGRLGHGD---TDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 27/299 (9%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDG 353

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 209
           L+   +V  +A G  +  AVT +G +Y++G  S+ C  LG+  +     P+ +     +G
Sbjct: 354 LKNT-NVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNG-PLEG 411

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           IHV  VS G  H   + SSG ++T+G G  G LGHGD    + P  + SLK    V+   
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAAC 471

Query: 270 RKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
               T  +V+             G ++ +G    G LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESRLVPTCVAALVEP 528

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEME 369
           +  Q++ G   TV +T  G ++  G     QLG+    G L P  +       F++E++
Sbjct: 529 NFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKL-PVRVEGKLSKNFVEELD 586



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 292 DSFVPKALESAVL--LDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPK 349

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILD 312
            +  LK+     V   +  +  +  +G +Y +G      G LG+  R  +   +  ++  
Sbjct: 350 LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGY--RNEASNWVPKKLNG 407

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L   HV+ +S G +HT VVT  G+LF FGD     LGH   R    P E+
Sbjct: 408 PLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREV 458



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 226 DSSGYVYTWGKGYCGALGHGD---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           D+ G VY WG+G  G +  G            D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESA-VLLDVQTIACGRRHAA 318

Query: 277 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           LV   G V+ +G    G LG    GV   VL P+++D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLS 375

Query: 336 GRLFGFG 342
           G L+ +G
Sbjct: 376 GDLYTWG 382


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNTNIELVACG 372

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 431

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             VT +G +++FG G+   LGHG+     +PR +++   KG   V  + G  H  A+   
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESL--KGHRTVISACGVWHTAAVVEI 489

Query: 227 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVA 549

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T R 
Sbjct: 550 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRT 606

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 607 EVYTWGKGANGRLGH 621



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 369 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 427

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  SGQ+FT GD +    GH DT + + +PR VE+LKG        G+  T  +
Sbjct: 428 PWHTAVVTSSGQLFTFGDGTFGVLGHGDT-KSVSKPREVESLKGHRTVISACGVWHTAAV 486

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L +  +  ++A G S
Sbjct: 487 VEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDP-NFCRVACGHS 545

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 546 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKS--FVEEIACGAYHVAVLT 603

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 604 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 637



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 149/343 (43%), Gaps = 25/343 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+  L+     +FS G    G LGHG ++   +    I+  S  ++  V+  E H   V
Sbjct: 321 GRHAALVTKQGEIFSWGEESGGRLGHGVDS-DVLHPKLIDSLSNTNIELVACGEYHTCAV 379

Query: 66  LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 380 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ 439

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAG-PSYMLA 170
           + T G  T G LGHGDT     P+ +  L+               +VV+I  G PS   +
Sbjct: 440 LFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSS--S 497

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
              +G ++++G G    LGHG++  +L P  +        +  RV+ G    VAL +SG+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VDPNFCRVACGHSLTVALTTSGH 555

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
           VYT G    G LG+  + D  LP  +   L      ++        VL     VY +G  
Sbjct: 556 VYTMGSPVYGQLGN-PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKG 614

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G LG  D   +D    P ++++L+   V  I+ G   T  +
Sbjct: 615 ANGRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTATI 654



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 420

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + SSG ++T+G G  G LGHGD    + P  + SLK H  V      
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGV 480

Query: 272 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+            +G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 481 WHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVDPNF 537

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
            +++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PTRVEGKLAKSFVEEI 592



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 60
           I+ G +HT ++++S  +F+ G    GVLGHG   T+ VS  R       H   +SA    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVW 481

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVDPNFCRV 540

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPTRVEGKLAKSFVEEIACGAYHV 599

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 644



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 70
           L ++  V++ GS + G LG+ P+    +  TR+    A   V+ ++    H A +    +
Sbjct: 550 LTTSGHVYTMGSPVYGQLGN-PQADGKLP-TRVEGKLAKSFVEEIACGAYHVAVLTSRTE 607

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 608 VYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S   + PR++  L    ++Q++ G  HT+ +V  RG+++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 114
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 233
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGKVYA 326

Query: 234 WGKGYCGALGHGDEIDKTLPE 254
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP+ I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 241 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 360 PTEI 363
           PT++
Sbjct: 241 PTQL 244



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 156/352 (44%), Gaps = 29/352 (8%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 193
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            D   P+ ++    +   +V V+ G  H + + +SG  + +GK   G LG    ID T+ 
Sbjct: 741 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTASGKAFAFGKNDYGQLG----ID-TME 793

Query: 254 EPLSSLKSH--LAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS----- 302
             L+ ++    L  Q C   R     T  L     ++ FG   +G LG      S     
Sbjct: 794 NQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNL 853

Query: 303 ----DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 854 QLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 183 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 622 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 676

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 295
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 677 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 736

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 737 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTME 793

Query: 356 GCLEPTEI 363
             L P ++
Sbjct: 794 NQLAPVQV 801



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 10/285 (3%)

Query: 70  QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 680

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 245
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 681 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 738

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
           D ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++
Sbjct: 739 DSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGID--TMENQL 796

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 797 APVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 841



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 30/353 (8%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 58
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 598 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 656

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 657 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 119 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 716 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTASG 774

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 232
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 775 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 830

Query: 233 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 831 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 890

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G +Y FG    G LG    G + + + P  +D      V+ ++ G YHTVV+T
Sbjct: 891 GVMYVFGRNNHGQLG---TGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 25/360 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQ---DYVIIQISCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVEQVACGHRHTLFLTANGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS  +  LGH    D    R +     +   ++++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDHSQLGH----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 241 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 KDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 360 PTEI 363
           PT++
Sbjct: 241 PTQL 244



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H+L +S+   V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGN 152

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 114
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 233
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 234 WGKGYCGALGHGDEIDKTLPE 254
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG+N
Sbjct: 2   LCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG++  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G      +T
Sbjct: 322 KHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACGEYHACAVT 380

Query: 120 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 176
           + G +++ G  TH  G LGHG+ +    PK +  PLE +  V  IA GP +   VT  G+
Sbjct: 381 LSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGL-RVASIACGPWHTALVTTTGL 439

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 225
           +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+           
Sbjct: 440 LFTFGDGTFGVLGHNDRKSAYSPREVESL--KGLRTVRAACGVWHTAAVVEVMVGSSSAG 497

Query: 226 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             SSG ++TWG G  G LGHGD+  + +P  +++L  H   QV      T  L   G V+
Sbjct: 498 SCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGGVF 557

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             G   +G LG P    +D  L   +   L   +V  I+ G +H  V+T    ++ +G  
Sbjct: 558 TMGSSTYGQLGDPQ---ADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKG 614

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEE 370
              +LGH  L     PT   ++ ++E
Sbjct: 615 ANGRLGHGDLEDRNTPT--LVEALKE 638



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH   ++ S  ++S G      G+LGHG + +  +   R+N P     V  ++  
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP-KRVNGPLEGLRVASIACG 427

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +G +FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHND-RKSAYSPREVESLKGLRTVRAACGVWHTAAV 486

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L +  +  Q+A G S
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVD-HNFRQVACGYS 545

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G V++ GS +   LG   Q D   P  ++  +    +V  ++ G  HV  L 
Sbjct: 546 LTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLT 603

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            +  VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 604 HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALK 637



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 15/277 (5%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 211
              + V +A G  +  AVT +G +YS+G G++    LGHG       P+ +     +G+ 
Sbjct: 363 SSTTEV-VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLR 420

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 421 VASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGV 480

Query: 272 RKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
             T  +V+            S   F W G G  G    G  ++ L P  + +L  H+  Q
Sbjct: 481 WHTAAVVEVMVGSSSAGSCSSGKLFTW-GDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQ 539

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           ++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 540 VACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKL 576



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 3   ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +HT L++ + + F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 424 IACGPWHTALVTTTGLLFTFGDGTFGVLGHN-DRKSAYSPREVESLKGLRTVRAACGVWH 482

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 483 TAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV-PTCVAALVDHNFRQVA 541

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT +G V T GS+T+GQLG     D   P  +        V  IA G  ++ 
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQA-DGKLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
            +T N  VY++G G+N  LGHG+  D   P  ++  + K +  +   A
Sbjct: 601 VLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++  GSG    L      D L P+ +++     + V  ++ G +H   +   G V+TWG+
Sbjct: 287 IHRIGSGGAINL------DALLPKPLESALV--LDVQLIACGGKHAALVTKQGEVFTWGE 338

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LGHG + D + P+ + +L S     V   +     +  +G +Y +G  G  +LG 
Sbjct: 339 ESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWG-DGTHNLGL 397

Query: 297 PDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
              G       P R+   L    V+ I+ G +HT +VT  G LF FGD     LGH+  +
Sbjct: 398 LGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRK 457

Query: 356 GCLEPTEI 363
               P E+
Sbjct: 458 SAYSPREV 465


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 23/324 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTM 349

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  TH  G LGHG+ +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG++ +   PR +++    G+  +  + G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDRENVAYPREVESL--SGLRTIAAACGVWHTAAVVEVIVTQSSSSI 466

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAM 526

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    +D  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 347 AQLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH  +     P  I ++ +++
Sbjct: 584 GRLGHGDIEDRKAP--ILVEALKD 605



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D     + PR VE+L G+       G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAY-PREVESLSGLRTIAAACGVWHTAAV 454

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSL 513

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+     +L P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFAMGSTVYGQLGNPYADGKL-PCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIAC 613



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 36/347 (10%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+  L+     VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 290 RHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDF--------VACGE 341

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H   V  +G+++T GD  +++   GH +        R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++   A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIA-AACGVWHTAAVVEVIVT 460

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--KIACGHSLTVGLT 518

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYG 285
           +SG+V+  G    G LG+    D  LP  +    S  +V ++        VL     VY 
Sbjct: 519 TSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYT 577

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           +G    G LG  D  + D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 578 WGKGANGRLGHGD--IEDRKA-PILVEALKDRHVKYIACGANYTAAI 621



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 21/300 (7%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRI-S 381

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 261
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRT 441

Query: 262 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
                   H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           L  ++  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEE 558



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +T G +HT L++++  +F+ G    GVLGHG    + V++ R +   S    +  +    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--ENVAYPREVESLSGLRTIAAACGVW 449

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 508

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV   GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDR--HVKYIACGANYTAAI 621


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 130/252 (51%), Gaps = 5/252 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G   +Q  +G   +  L   G VH+CG N+ GQLG         PK I  LE +  V  +
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETL-RVELV 91

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG GE +   L P+ I+T    GI +++VS G+ 
Sbjct: 92  SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL--TGIKIIQVSCGNY 149

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL   G V++WG    G LG G E+  +  P+ + SL      QV A    +F L  
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSL 209

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G+ +G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T  G++F
Sbjct: 210 SGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVF 269

Query: 340 GFGDNERAQLGH 351
            FGDN   QLGH
Sbjct: 270 TFGDNSCGQLGH 281



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 14/302 (4%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           P    + Q ++ E H+  +L  G V +CGDNS    G R   R   +P+ ++AL+ +  +
Sbjct: 31  PGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREE-QPKPIQALETLRVE 89

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 165
            V+ G   +  +  +G V   G+ + GQLG G+  +    P+ I  L  +  ++Q++ G 
Sbjct: 90  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI-KIIQVSCGN 148

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            + LA++ +G V+S+GS S+  LG G E   +  P+ +++    GI + +V+AG  H  A
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL--DGIPLAQVAAGGAHSFA 206

Query: 225 LDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           L  SG  + WG    G L   G    +    P  +S+LK+   V +      T VL   G
Sbjct: 207 LSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNG 266

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            V+ FG    G LG      + +   P++++ +    VSQI  G YHT+  V   G++  
Sbjct: 267 KVFTFGDNSCGQLG---HSPTAEKTGPQLMEGIEG-LVSQIDCGSYHTLAYVYTTGQVVS 322

Query: 341 FG 342
           FG
Sbjct: 323 FG 324



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 27/300 (9%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHVV 53
           Q  +G  H+LL+ S+ +V SCG +  G LG         P+  Q +   R+         
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVEL------- 90

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            VS  + H+  V   G+VF  G  S    G  +       P+ ++ L G+   QV+ G  
Sbjct: 91  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNY 149

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +  L+  G V + GSN+HGQLG G  L  + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGI-PLAQVAAGGAHSFALS 208

Query: 173 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +G   SFG GSN        G        +PR++   +  G  VV +S G EH   L  
Sbjct: 209 LSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG--VVYISCGHEHTAVLTQ 264

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V+T+G   CG LGH    +KT P+ +  ++  ++   C        +  TG V  FG
Sbjct: 265 NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 29/312 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           + GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  SKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGH ++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 288

Query: 364 FIQEMEEDTGLA 375
                 E T +A
Sbjct: 289 LELMGSEVTQIA 300



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG NS    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG    G  +  + PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG---HGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G   D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 GSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 7/276 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 358


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 168/330 (50%), Gaps = 24/330 (7%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQS--GQVFTCGDNSS------FCCGHRDTNR----- 89
           +IN     H++ +  ++N    + +S   ++ T  +NS+      F  G  D ++     
Sbjct: 516 KINPDFQKHILSMFYTQNRKLSISESKDDELCTLWENSTNKQVDVFMWGLNDKDQLGGLK 575

Query: 90  --PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 146
              +  P L + L  + CK +  G   T F+T +G +++CG ++ G+LG GD T +  +P
Sbjct: 576 GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSP 635

Query: 147 KSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           + +  L + + + V + +G ++++A+T +G+ +S+G G N  LGHG      +P  I+ F
Sbjct: 636 RLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF 695

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
              G  V  +S G  H  A+  + Y+YTWG G  G LGHGDE     P+ ++    +  V
Sbjct: 696 V--GKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVV 753

Query: 266 QVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
           QV   +R  +T  + D   V+ +G   FG LG   RG S++ L P  ++ LR   + +I 
Sbjct: 754 QVSCGSRDAQTVCITDDDKVWSWGDGDFGKLG---RGGSERCLIPVEVEQLRGLQICKIL 810

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            G   TV +T  G ++ +G  +  +LGH T
Sbjct: 811 CGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
           F+   G++++CG++S    G  D    +  PRLV  L  +   +V+  +G N    LT  
Sbjct: 605 FITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSD 664

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 180
           G   + G   +GQLGHG+ +    P  I     VG +V  I+ G ++  A+  N  +Y++
Sbjct: 665 GLAFSWGDGENGQLGHGNLMSCSKPHLIEAF--VGKIVTDISCGSAHSAAIVENKYLYTW 722

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGY 238
           G G    LGHG++   LQP+ +  F   G +VV+VS G  D   V +     V++WG G 
Sbjct: 723 GLGDFGRLGHGDEETILQPKFVTHFL--GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGD 780

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G      +P  +  L+     ++    + T  L  TG+V+ +G   F  LG   
Sbjct: 781 FGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG--- 837

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G    V +P++++ LR  HV  I+ G  H + VT  G +F +GDN+  QLG
Sbjct: 838 HGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 11/290 (3%)

Query: 75   GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 132
            G+N     G+ +T   +  PRL+E++K +  K+++  +G      L+  G V + G    
Sbjct: 1502 GNNGQLGLGYSET---VTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGED 1558

Query: 133  GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
            G+LGHG+      PK I      G ++  I AG S+  A+  NG +Y++G G    LGHG
Sbjct: 1559 GKLGHGNRQTSSQPKRIEFF--CGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHG 1616

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
            +  D+L+P+ ++  +   +  V   +GD   + + +   V++WG G  G LG G      
Sbjct: 1617 DSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCK 1676

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            +P  +  L     V+V    + +  L   G +Y +G   +  LG    G  + V RP ++
Sbjct: 1677 VPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLG---HGTEEHVRRPMMV 1733

Query: 312  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             +L    V+ IS G  H VV TD G ++ +GDN+  QLG  T+     PT
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPT 1783



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 14/338 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 59
           I  G   T  I+N   ++SCG S  G LG G  T    S   +   +   V +VS     
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH   +   G  F+ GD  +   GH +      +P L+EA  G     ++ G   +  + 
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNL-MSCSKPHLIEAFVGKIVTDISCGSAHSAAIV 714

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGV 176
              +++T G    G+LGHGD      PK +     +G +VVQ++ G   +  + +T +  
Sbjct: 715 ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF--LGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+S+G G    LG G     L P  ++  R  G+ + ++  G +  VAL  +G V+TWGK
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGK 830

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G    LGHG +I    P+ +  L+    + +         +   G V+ +G    G LG 
Sbjct: 831 GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG- 889

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
              G +D    P ++  L  H +  ++ G  H++  T+
Sbjct: 890 --TGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTE 925



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 18/320 (5%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSGQVFT 73
            VF+ G    G LG G   ++ V+  R+   S  H+    + V +   H   +   G+VF+
Sbjct: 1496 VFATGYGNNGQLGLG--YSETVTSPRL-LESIKHINIKKISVHSGGRHCLALSSDGEVFS 1552

Query: 74   CGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
             G+      GH  R T+    +P+ +E   G     + AG + +  + + G ++T G   
Sbjct: 1553 WGEGEDGKLGHGNRQTSS---QPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGR 1609

Query: 132  HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
            +G+LGHGD+ D+  PK +  L+    + V   +G +  L +T +  V+S+G G    LG 
Sbjct: 1610 YGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGR 1669

Query: 191  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            G       P  I+    KGI  V+V  G +  +AL   G +YTWGKG    LGHG E   
Sbjct: 1670 GGSDGCKVPMIIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727

Query: 251  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              P  +++L + +   +        V  D G VY +G    G LG    G       P +
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG---DGTIIARQTPTL 1784

Query: 311  LDSLRAHHVSQISTGLYHTV 330
               L    + +IS G  HT+
Sbjct: 1785 NTFLLNKKIDRISCGSAHTI 1804



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 7/250 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L S+  VFS G    G LGHG   T      RI F     +  + A  +H+A +
Sbjct: 1538 GRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP-KRIEFFCGKIITNICAGGSHSAAI 1596

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG--H 123
              +G+++T G       GH D++  + +P+ VEAL+      V  G      L I    +
Sbjct: 1597 GLNGELYTWGKGRYGRLGHGDSDDQL-KPKQVEALQFFFVLDVACGSGDAQTLCITNDDN 1655

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G   +G+LG G +     P  I  L   G +V++  G  + +A+T  GV+Y++G G
Sbjct: 1656 VWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKG-IVKVECGSQFSMALTKYGVLYTWGKG 1714

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              + LGHG +    +P  +     K   V  +S G  H V     G VY WG    G LG
Sbjct: 1715 DYYRLGHGTEEHVRRPMMVTALFNK--IVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG 1772

Query: 244  HGDEIDKTLP 253
             G  I +  P
Sbjct: 1773 DGTIIARQTP 1782



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGD 219
           IA G      +T  G +YS G  S   LG G+    +  PR +    +  +  V V +G 
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            HV+AL S G  ++WG G  G LGHG+ +  + P  + +    +   +      +  +V+
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE 715

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGR 337
              +Y +G   FG LG    G  + +L+P+ +     ++V Q+S G     TV +TD  +
Sbjct: 716 NKYLYTWGLGDFGRLG---HGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 338 LFGFGDNERAQLGHDTLRGCLEPTEI 363
           ++ +GD +  +LG      CL P E+
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEV 798



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            T   +V++ G G+N  LG G       PR +++ +   I  + V +G  H +AL S G V
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEV 1550

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            ++WG+G  G LGHG+    + P+ +      +   +CA    +  +   G +Y +G   +
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRY 1610

Query: 292  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQL 349
            G LG    G SD  L+P+ +++L+   V  ++  +G   T+ +T+   ++ +GD +  +L
Sbjct: 1611 GRLG---HGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKL 1667

Query: 350  GHDTLRGCLEPTEI 363
            G     GC  P  I
Sbjct: 1668 GRGGSDGCKVPMII 1681



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 231 VYTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+ WG   K   G L        TL + LSSL+      +    + TF + + G +Y  G
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKF---IAGGSKSTFFITNKGKLYSCG 616

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              FG LG  D  ++  V  PR++  L    V+++S  +G  H + +T  G  F +GD E
Sbjct: 617 ESSFGKLGIGD--ITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGE 674

Query: 346 RAQLGHDTLRGCLEP--TEIFIQEMEED 371
             QLGH  L  C +P   E F+ ++  D
Sbjct: 675 NGQLGHGNLMSCSKPHLIEAFVGKIVTD 702



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 176  VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVY 232
            V   F    +FCL     H   E+  + I    ++  H V++   D   V + + G  V+
Sbjct: 1443 VFEDFEKNLDFCLARVNGHFSAEMCVKLIDNLLKE--HNVKI---DCDTVCITTDGALVF 1497

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYGFGWM 289
              G G  G LG G     T P  L S+K H+ ++   V +  R    L   G V+ +G  
Sbjct: 1498 ATGYGNNGQLGLGYSETVTSPRLLESIK-HINIKKISVHSGGRHCLALSSDGEVFSWGEG 1556

Query: 290  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
              G LG  +R  S    +P+ ++      ++ I  G  H+  +   G L+ +G     +L
Sbjct: 1557 EDGKLGHGNRQTSS---QPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRL 1613

Query: 350  GHDTLRGCLEPTEI 363
            GH      L+P ++
Sbjct: 1614 GHGDSDDQLKPKQV 1627


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 141/279 (50%), Gaps = 14/279 (5%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPK 147
           P+F PR      G   K++  G   + FL   G V+TCGSN+ GQLGH    ++P  TP+
Sbjct: 20  PMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGH----NKPGITPE 75

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 206
            +  L+    +  ++ G ++ LAV   G V+++G+G    LG G     ++ PR I+  R
Sbjct: 76  FVGALD-TQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK--R 132

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAV 265
                + +V  G++H +AL   G ++TWG+   G LG G  E  K  P+PL SL      
Sbjct: 133 LCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLA 192

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           ++ A    +F L  +G+V+G+G    G LG  D  + D+ + P  +  LR+  V  IS G
Sbjct: 193 KITAGGDHSFALSLSGAVFGWGKNKAGQLGLND--IQDRAV-PCHIKFLRSQKVVHISCG 249

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
             HT  +T  G LF FGD    QLGH +    L P  + 
Sbjct: 250 EEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL 288



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 12/342 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G +  G LG G E          N  +   + ++     H+ F+L  G V+TCG NS   
Sbjct: 5   GKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS--- 61

Query: 82  CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 141
           CG    N+P   P  V AL       V+ G   +  +  +G V   G+   GQLG G T 
Sbjct: 62  CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 142 DR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 199
                P+ I  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           + +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D  D+ +P  +  L
Sbjct: 181 QPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFL 238

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
           +S   V +   +  T  L   G ++ FG   +G LG    G +   L PR +  L    V
Sbjct: 239 RSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLG---HGSTANELLPRRVLELMGTEV 295

Query: 320 SQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEP 360
           SQI+ G +HT+      G ++ FG N   QLG   L     P
Sbjct: 296 SQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSP 337



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 132/298 (44%), Gaps = 20/298 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS  + 
Sbjct: 42  GQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITL--------VSCGQA 93

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  V + GQVF  G       G   T   +  PRL++ L      QV  G      L+ 
Sbjct: 94  HSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK 153

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 178
            G + T G NT GQLG G     P+     PL+ +  +   +I AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVF 211

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      LG  +  D   P  I+  R +   VV +S G+EH  AL   G ++T+G G 
Sbjct: 212 GWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGEEHTAALTKDGGLFTFGDGS 269

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LGHG   ++ LP  +  L      Q+ C R         +G VY FG    G LG
Sbjct: 270 WGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLG 327



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 7/259 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 60
           ++ G+ H+L ++    VF+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG-TTETAVRIPRLIKRLCDHRIAQVMCGNQ 146

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   + + GQ+FT G N+S   G          P+ +++L G+P  ++TAG + +  L++
Sbjct: 147 HCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSL 206

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS-QKVVHISCGEEHTAALTKDGGLFTF 265

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 239
           G GS   LGHG   +EL PR +      G  V +++ G  H +A   SSG VY +G    
Sbjct: 266 GDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323

Query: 240 GALGHGDEIDKTLPEPLSS 258
           G LG G       P PL +
Sbjct: 324 GQLGTGVLSADKSPYPLKT 342



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + +++A  +
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGD 199

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-GNGVV 177
             G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    +G V
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGV 315

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKGIH--VVRVSAGDEHVVALDSS 228
           Y+FG  S+  LG G    +  P  ++T F    IH  V +++ G +H   L S+
Sbjct: 316 YAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 60
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKL-PNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 17/277 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           ++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKL 570



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKLPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 638



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 287 GSSFDM----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 341 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 399

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 400 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458

Query: 363 I 363
           +
Sbjct: 459 V 459


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVTAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QVTAG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  GS++ G LG G  E     +   +NF  A  + Q++  +N+   V + GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     G     +   R +L+  +  +  ++   G + T  +   G + + GSN  GQLG
Sbjct: 61  NDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 137 HGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG- 191
               LDR +     P  ++ +G+  +VQIA G  + +A+T NG +Y++GS S+  LG G 
Sbjct: 118 ----LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           +   EL+P+ + +     + +  V+ G  H + +  SG V+ WG+   G LG  D  ++ 
Sbjct: 174 DTKMELKPKLVHSL--AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 252 LPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
           +P  L +L+ S +    C  +   F+ +D G V+  G   +G LG    G     + PR 
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNKTSEILPRQ 287

Query: 311 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P  +F
Sbjct: 288 IMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVF 342



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 15/300 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 57
           QI  G  +T+ ++    V+SCG++  G LG   G +  Q +S    + F  AA       
Sbjct: 38  QIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKAA------C 91

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +H   V + GQ+F+ G N     G    +  I  PR+V+ L      Q+  GL  +  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 118 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G ++  GSN+ GQLG G DT     PK +  L  V  +  +A G  + + ++ +G 
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAV-PIAFVACGGYHTIVISKSGA 210

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G  +   LG  +  +   P  ++T R     V   + G+E  V L   G V+T G 
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNS--RVCYAACGEEFSVFLTMDGGVFTCGA 268

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G  G LGHG++  + LP  +  L      Q+   +R T  LV + G VY +G  G G LG
Sbjct: 269 GMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 5/251 (1%)

Query: 6   GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HTL+++    +FS GS++ G LG    +        +       +VQ++    H+  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +  +G+++  G NS    G     +   +P+LV +L  VP   V  G   T  ++  G V
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAV 211

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G NT GQLG  D  +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 243
              LGHG +  E+ PR I      G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 271 YGQLGHGNKTSEILPRQIMELM--GSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328

Query: 244 HGDEIDKTLPE 254
           +    + T P+
Sbjct: 329 NRIAQNSTTPQ 339


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 145/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           + +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G E   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVL 377


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 9/309 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3927 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMMPTLLESIQHVFVKK 3985

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 164
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V +A G
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDVACG 4043

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4044 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4103

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +GS+Y
Sbjct: 4104 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIY 4163

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN
Sbjct: 4164 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDN 4220

Query: 345  ERAQLGHDT 353
            +  QLG  T
Sbjct: 4221 DEGQLGDGT 4229



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 154/324 (47%), Gaps = 10/324 (3%)

Query: 42   TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 100
            T ++F  S   +VQ  AS        Q   V+  G N     G    ++ I  P   E+L
Sbjct: 2881 TSVSFLASDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSK-IKLPVYSESL 2939

Query: 101  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 159
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V
Sbjct: 2940 SKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKV 2999

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
             + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K I    V+ G 
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR--DVACGS 3057

Query: 220  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 277
             H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV   +R  +T  L
Sbjct: 3058 GHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMAL 3117

Query: 278  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
               GSVY +G   FG LG   RG SD    P ++D L    V QI  G   ++ +T  G 
Sbjct: 3118 TADGSVYSWGDGDFGKLG---RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGE 3174

Query: 338  LFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G  +  +LGH       +PT
Sbjct: 3175 VWTWGKGDYFRLGHGNDHHVRKPT 3198



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 157/325 (48%), Gaps = 16/325 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2963 LYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH + +  + +PRL+E+LK    + V  G   +  +T  G ++T G   +G+L
Sbjct: 3022 EGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRL 3080

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3081 GHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P  +   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3139 SDGCYTPLLVD--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3196

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    + V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3197 PTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3253

Query: 313  SLRAHHVSQISTGLYHTV--VVTDR 335
             L    V+++S G  H++  V+TD+
Sbjct: 3254 ELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 20/335 (5%)

Query: 5    TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 58
            TG   TL  + ++  V++ G    G LG G   T  V    +   S  HV    V V++ 
Sbjct: 3935 TGGEQTLFAVTADGKVYATGYGAVGRLGIG--GTDSVMMPTL-LESIQHVFVKKVAVNSG 3991

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 117
              H   +   G V++ G+      GH   NR  + RP+L+E L G     V  G + +  
Sbjct: 3992 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNG 175
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   V+ +A  +G +  L VT + 
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY-KVIDVACGSGDAQTLCVTDDD 4108

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWG
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVIKVECGSQFSVALTRSGSIYTWG 4166

Query: 236  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            KG    LGHG +     P  +++L+    + +           D G V+ +G    G LG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226

Query: 296  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4227 ---DGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 11/291 (3%)

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 122
            V Q G+++ CG+ ++   G  D       P+ +  L     K+V   +G      LT  G
Sbjct: 2957 VSQEGKLYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDG 3015

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LGHG+      P+ I  L+    +  +A G  +  A+T +G +Y++G 
Sbjct: 3016 RVFSWGEGEDGKLGHGNCSSLDKPRLIESLKS-KRIRDVACGSGHSAAITSSGELYTWGL 3074

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCG 240
            G    LGHG+ + +L+P+ +Q+    G  V++V+ G  D   +AL + G VY+WG G  G
Sbjct: 3075 GEYGRLGHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFG 3132

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG    G
Sbjct: 3133 KLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG---HG 3189

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                V +P +++ LR   V  ++ G  H + VTD G+++ +GDN+  Q G+
Sbjct: 3190 NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3240



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 121/253 (47%), Gaps = 13/253 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG     C S  +   I    +  +  V+    H+
Sbjct: 3005 GKHALALTQDGRVFSWGEGEDGKLGHG----NCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  SG+++T G       GH DTN  + +P+LV++L G    QV  G     T  LT 
Sbjct: 3061 AAITSSGELYTWGLGEYGRLGHGDTNTQL-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3119

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    TP  +  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3120 DGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3178

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+  +G VY WG    G
Sbjct: 3179 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3236

Query: 241  ALGHGDEIDKTLP 253
              G+G  I    P
Sbjct: 3237 QQGNGSTIVNKKP 3249



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3951

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ +    P+ +  L     V V      +  +   G +Y +G   +G LG  D
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4071

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4072 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4128

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4129 CKVPMKI 4135



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 9/262 (3%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 118
            H   + +   V++ G+      GH D  R  +  P+L+E+L       +  G  ++  L
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGD--RTWYEEPKLIESLVDKNITFIACGSTYSAAL 573

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G ++T G   +G+LGHG++ D   P  ++ L   +   V   +G S  L VT +G+V
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIV 633

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +S+G G    LG G  +    P+ +       I+V +V  G +   AL + G VYTWGKG
Sbjct: 634 FSWGDGDYGKLGRGGCNGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKG 691

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
               LGHG+E     P+ + +LK+    ++C        L +   VYG+G   +G +   
Sbjct: 692 EAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI--- 748

Query: 298 DRGVSDKVLRPRILDSLRAHHV 319
           D  +   V  P +  +L   +V
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNV 770



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT    V++ G+   G+LGHGD      PK I  L +  ++  IA G +Y  A++ NG +
Sbjct: 521 LTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVD-KNITFIACGSTYSAALSSNGEL 579

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   D + P  +       I  V   +GD   + + +SG V++WG G
Sbjct: 580 YTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDG 639

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 640 DYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 697

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + V  P+ +++L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 698 -HGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 25/292 (8%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L +S+   V+S G    G LGHG      +S+ R   I       +V V+  
Sbjct: 3988 VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSYDRPKLIEELLGTEIVDVACG 4043

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D+   +  P+LVEAL+      V  G      L
Sbjct: 4044 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVEALQDYKVIDVACGSGDAQTL 4102

Query: 119  --TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              T   +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4103 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VIKVECGSQFSVALTRSGS 4161

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            +Y++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4162 IYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVFTWGD 4219

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
               G LG G       P  + +L+            K    V  GS +   W
Sbjct: 4220 NDEGQLGDGTTCALQRPRLVHALQG-----------KKITRVACGSAHTLAW 4260



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 21/246 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 58
           G+++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++  
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITF--------IACG 566

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 116
             ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + T 
Sbjct: 567 STYSAALSSNGELYTWGRGNYGRLGHGNSDD-VMVPTLVSALNGHMIVYVACGSGDSQTL 625

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  G 
Sbjct: 626 CVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAYGE 684

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY++G G  + LGHG +     P+AI+  + K   V  +  G  HV+AL     VY WG+
Sbjct: 685 VYTWGKGEAYRLGHGNEEHVRYPKAIEALKTK--KVKELCVGSLHVLALTEDQLVYGWGR 742

Query: 237 GYCGAL 242
              G +
Sbjct: 743 NDYGQI 748



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 17/195 (8%)

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +L+ +GN  +  +GS + +            P+ +  F  K + ++      +H +AL  
Sbjct: 476 ILSTSGNVYMMYYGSETQY------------PQRVYGFSDKFVAMIASHPDGKHYLALTE 523

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
              VY+WG G  G LGHGD      P+ + SL       +      +  L   G +Y +G
Sbjct: 524 DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWG 583

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              +G LG    G SD V+ P ++ +L  H +  ++  +G   T+ VT  G +F +GD +
Sbjct: 584 RGNYGRLG---HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640

Query: 346 RAQLGHDTLRGCLEP 360
             +LG     G   P
Sbjct: 641 YGKLGRGGCNGSKTP 655


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVC 268
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 127 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 176
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 81  LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 141 TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 192

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 250

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 251 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 310

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 311 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 367

Query: 364 F 364
            
Sbjct: 368 L 368



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 109 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 164

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 223

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 281

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 282 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 341

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 342 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 399 GCGARGQLG 407



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 122 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 178

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 179 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 238

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 355

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 356 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 407



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 224

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 225 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 284

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 343

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 402 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 456


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 166/371 (44%), Gaps = 27/371 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSA 57
           ++  G  H+++I SN  V+S G++  G LG G    +   CV    I       + Q + 
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCV----IRSLQGIRITQAAV 204

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
                  V  +G V++ G          D  +  I  PR+ E+LKGV   Q   G  F+ 
Sbjct: 205 GSRCTMLVSDTGSVYSFGKEDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSA 264

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGN 174
            L+  G V+T       +LGH        P+ +  LE+V  V  I+AG  Y  MLA   N
Sbjct: 265 VLSREGRVYTFSWGKAERLGHSSDPSDVEPRLLPGLEDV-PVAYISAGNCYLLMLAYQPN 323

Query: 175 GV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           G+ VYS G G    LGHG + +   P+ ++ F+      V ++AG  H VAL + G V T
Sbjct: 324 GMSVYSVGCGLGGKLGHGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCT 383

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G+ G LGHGDE  + +P  +  L+   AV V   +  TFV+ + G VY FG     +
Sbjct: 384 WGWGHTGCLGHGDEECRAVPTVVEGLRDVKAVHVSTGEYTTFVVAENGDVYSFGSGESLA 443

Query: 294 LGFPDRGVSD-KVLRPRILDSLR--AHHVSQIS-----------TGLYHTVVVTDRGRLF 339
               D    +     P I+ SL+     V QIS            G  HT  V D G + 
Sbjct: 444 FQLDDEAEEEPDSSTPSIVSSLKDLNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVC 503

Query: 340 GFGDNERAQLG 350
            FG   R QLG
Sbjct: 504 AFGGGVRGQLG 514



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           RV AG  H + + S+G VY++G    G LG GD  D+  P  + SL+     Q     R 
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRC 208

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++ DTGSVY FG   F      D G   ++  PRI +SL+   V Q + G Y + V++
Sbjct: 209 TMLVSDTGSVYSFGKEDFRVAELVD-GAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLS 267

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEP 360
             GR++ F   +  +LGH +    +EP
Sbjct: 268 REGRVYTFSWGKAERLGHSSDPSDVEP 294



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           +V AG   +  +T  G V++ G+N  GQLG GD+ DR  P  I  L+ +  + Q A G  
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGI-RITQAAVGSR 207

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + V+  G VYSFG   +F +     G       PR  ++   KG+ VV+ + G     
Sbjct: 208 CTMLVSDTGSVYSFGK-EDFRVAELVDGAHFQITTPRIEESL--KGVFVVQAAIGGYFSA 264

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV---DT 280
            L   G VYT+  G    LGH  +     P  L  L+      + A      +L    + 
Sbjct: 265 VLSREGRVYTFSWGKAERLGHSSDPSDVEPRLLPGLEDVPVAYISAGNCYLLMLAYQPNG 324

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
            SVY  G    G LG    G       P++++  ++     +S   G +H V +   GR+
Sbjct: 325 MSVYSVGCGLGGKLG---HGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRV 381

Query: 339 FGFGDNERAQLGH 351
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 25/360 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH     P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       V+Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQ---DYVVIQISCGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 295 G 295
           G
Sbjct: 336 G 336



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTANGKVYAC 64

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           GS  +  LGH     EL   R +     +   V+++S G  H +AL   G V +WG   C
Sbjct: 65  GSNDHSQLGH-----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC 119

Query: 240 GALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                    P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +      
Sbjct: 180 PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239

Query: 359 EPTEI 363
            PT++
Sbjct: 240 YPTQL 244



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G  H+L +S    V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 114
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 233
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 234 WGKGYCGALGHGDEIDKTLPE 254
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 115
             NH+  + +SG VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNN---CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFS 262

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTG 173
            FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
            G VY+FG GS+  LG       + P+ +
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 20/304 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  G   +  +T
Sbjct: 318 HAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCAVT 375

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   VT  G +++
Sbjct: 376 LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFT 435

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DS 227
           FG G+   LGHG++     PR + +   KG+  VR + G  H  A+             S
Sbjct: 436 FGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 493

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG ++TWG G    LGHGD+  K +P  +++L      QV      T  L  +G VY  G
Sbjct: 494 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 553

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  ++ +G     
Sbjct: 554 SPVYGQLGNPH---ADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 348 QLGH 351
           +LGH
Sbjct: 611 RLGH 614



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 60
           +  G YH+  ++ S  +++ G    G+LGHG E +  V   R+NF     HV  ++    
Sbjct: 364 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KRVNFLMEGIHVSSIACGPY 422

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 423 HTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 481

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   +  P  +A L E  +  Q+A G S  
Sbjct: 482 VMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE-PNFCQVACGHSLT 540

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L S 
Sbjct: 541 VALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKS--FVEEIACGAYHVAVLTSR 598

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 599 TEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 630



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 20/221 (9%)

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           V  V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V 
Sbjct: 306 VLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELV- 364

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKR 272
            + G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C    
Sbjct: 365 -ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PY 422

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            T V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V
Sbjct: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAV 479

Query: 333 TD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +             G+LF +GD ++++LGH      L PT
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 520



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 358 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 415

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 416 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 475

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 532

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEI 585



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 21/340 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+      FS G    G LGHG ++   V   + I+  S  ++  V+  E H+  
Sbjct: 316 GQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCA 373

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V  SG ++T G       GH +        R+   ++G+    +  G   T  +T  G +
Sbjct: 374 VTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQL 433

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 172
            T G  T G LGHGD      P+ +  L+               +VV++  G S   +  
Sbjct: 434 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNC 492

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G G    LGHG++  +L P  +           +V+ G    VAL +SG+VY
Sbjct: 493 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSGHVY 550

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           T G    G LG+     K        L      ++        VL     VY +G    G
Sbjct: 551 TMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            LG  D   +D    P +++SL+   V  I+ G   T  V
Sbjct: 611 RLGHGD---ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 417 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 475

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 534

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 535 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVA 593

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 594 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 292 KMDSLLPKALES--TIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 349

Query: 253 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 350 PKLIDALSTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 406

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 407 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 458


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 8/245 (3%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3293 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3352

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3353 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3410

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             LGHGD   +  P+ +++L  H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3411 RLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3467

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3468 RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3527

Query: 359  EPTEI 363
            +PT I
Sbjct: 3528 KPTPI 3532



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 17/329 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 4396 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VTTPT 4454

Query: 96   LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 151
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4455 LVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4512

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4513 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4571

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + +     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4572 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGS 4631

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4632 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4688

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4689 CSDGGEVFTWGDNDEGQLGDGTVSAIQRP 4717



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 10/320 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4524

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4585 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4642

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDND 4702

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++               L 
Sbjct: 4703 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAVRPPPSPPLE 4759

Query: 351  HDTLRGCLEPTEIFIQEMEE 370
            +D +R  + P ++ +  ++E
Sbjct: 4760 YDLVRD-IAPEDVLVYSIKE 4778



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3260 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3316

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3317 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3376

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +       + 
Sbjct: 3377 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVV 3435

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3436 QVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGA 3495

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3496 QFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552

Query: 332  VTDRGRLFGFGDNERAQLG 350
            VTD G+++ +GDN+  Q G
Sbjct: 3553 VTDSGQVYAWGDNDHGQQG 3571



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 16/324 (4%)

Query: 29  LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 88
             HG  +T   S   I  P+   V QV+ SE     +  +GQV +   ++   C   DT 
Sbjct: 563 FAHG--STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN---CHTPDTT 617

Query: 89  RPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
            P    + +E L+ V   Q+ A         LT  G V + G+   G+LGHGDT  +  P
Sbjct: 618 AP----KPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP 673

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
             I  L E   V  +  G SY  A+T  G +Y++G G+   LGHG   D+  P  +Q  +
Sbjct: 674 TRIVALAE-RQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLK 732

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAV 265
           ++ +  V +  GD H + +  +G VY WG G  G LG+G     ++P  +   + S  AV
Sbjct: 733 QQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAV 792

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           +V +    +  L   G+VY +   G G  G    G S+    P+ + +L   ++  ++ G
Sbjct: 793 KVFSGSHFSVALGRDGTVYSW---GKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVG 849

Query: 326 LYHTVVVTDRGRLFGFGDNERAQL 349
           L H + +T  G L+G+G N+  QL
Sbjct: 850 LAHCLALTASGELYGWGRNDFQQL 873



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 21/339 (6%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 54
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3277 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3332

Query: 55   VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 113
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3333 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3390

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 171
             +  +T  G ++T G   +G+LGHGD   +  PK +  L +   VVQ+A G   +  L +
Sbjct: 3391 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALAD-HRVVQVACGSRDAQTLCL 3449

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            T  G+V+S+G G    LG G       P  ++  R  G+ V+++  G +  +AL  SG V
Sbjct: 3450 TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--RLNGVGVMQIECGAQFSLALTKSGEV 3507

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567

Query: 292  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3568 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3603



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 10/248 (4%)

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3239 LSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3295

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3356 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3415

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D       L+P+++ +L  H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3416 DNCTQ---LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3472

Query: 356  GCLEPTEI 363
            GC  P ++
Sbjct: 3473 GCSIPHQV 3480



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 13/277 (4%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L S+  VFS G    G LGHG       S+ R   I   S   V+ ++    H+
Sbjct: 4473 GKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVIDIACGSAHS 4528

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
            A +   G V T G       GH D+   + +P+LVEAL G     +  G      L I  
Sbjct: 4529 ACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDAQTLCITD 4587

Query: 123  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G VY++
Sbjct: 4588 DDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTRSGSVYTW 4646

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG    G
Sbjct: 4647 GKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDGGEVFTWGDNDEG 4704

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
             LG G       P  + SL+    V+V      T  L
Sbjct: 4705 QLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 128  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4383 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4438

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4439 GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4498

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4499 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4555

Query: 305  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4556 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4615

Query: 363  I 363
            I
Sbjct: 4616 I 4616



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 19/216 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 215
           V Q+A   + +  +T  G V S        L H   H  D   P+ I+    + +++V++
Sbjct: 584 VRQVACSETSIYILTTTGQVLS--------LQHSNCHTPDTTAPKPIEGL--ESVNIVQL 633

Query: 216 SAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           +A  E  HV+AL ++G V++WG G  G LGHGD   K +P  + +L       V      
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSY 693

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVV 331
           +  +   G +Y +G   +G LG    G S+    P I+  L+   V  ++ G    H++ 
Sbjct: 694 SAAITAAGELYTWGRGTYGRLG---HGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLC 750

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           VTD G ++ +GD +  +LG+ T  G   P  I + +
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQ 786



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L +   VFS G+   G LGHG  +++ +  TRI   +   V  V    +++A +
Sbjct: 639 GRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP-TRIVALAERQVTGVFCGSSYSAAI 697

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 123
             +G+++T G  +    GH ++      P +V+ LK      V  G      L  T  G 
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+  G    G+LG+G       P +I   +     V++ +G  + +A+  +G VYS+G G
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
               LGHG       P+AIQ    +G ++V ++ G  H +AL +SG +Y WG+
Sbjct: 817 HGGRLGHGHSEHTASPKAIQAL--EGKNIVDLAVGLAHCLALTASGELYGWGR 867


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G+++  +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G +    L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H   +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHNLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PR+++ L      QV+ G   +  L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHNLALSDRGQLFSWGAGSDGQLGLM-TTEDAVAVPRVIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+  +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 6   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 66  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 117

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 175

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 176 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 235

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 236 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 292

Query: 364 F 364
            
Sbjct: 293 L 293



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 34  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 89

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 148

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 149 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 206

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 207 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 266

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 267 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 324 GCGARGQLG 332



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 47  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 103

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 104 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 163

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 280

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 281 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 337

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 338 NVKCPSPVKGYWAAHSGQLS 357



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 91  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 149

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 150 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 209

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 268

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 327 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 381


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  T+  G LGHG+ +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T+R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRS 372

Query: 337 RLFGFGDNERAQLGH 351
            +F +G     +LGH
Sbjct: 373 EVFTWGKGANGRLGH 387



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 121/275 (44%), Gaps = 22/275 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVL 368

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            +   V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALK 403



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
            +  V  + G+ H  A+ ++G +YTWG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVA 187

Query: 267 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 326 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 143/342 (41%), Gaps = 24/342 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 67  QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G+++T GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 172
            T G  + G LGHGD      P+ +  L                ++V++    S      
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKL 265

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V 
Sbjct: 266 SAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQVL 323

Query: 233 TWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + G    G LG  H D     L E    +     +Q+        VL +   V+ +G   
Sbjct: 324 SMGNAVYGQLGNPHSDGRIPCLVE--DKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGA 381

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            G LG  D    D+ + P ++++L+   V  I+ G   T  +
Sbjct: 382 NGRLGHGD--TEDRKV-PTLVEALKDRAVRYIACGANFTAAI 420



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 20/276 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT  G +Y++G G+     LGHG       P+ I +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRI-SGALE 182

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 261
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 262 ----HLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
               H A  V+V   +  + V +  G ++ +G      LG  D+   +  L+P  + +L 
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK---ETRLKPTCVATLI 299

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            H   +++ G   TV +T  G++   G+    QLG+
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGN 335



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVLQIACGSYHVA 366

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
            +T    V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGA 414



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRIDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWG-DGTYNVGLLG 164

Query: 299 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 358 LEPTEI 363
             P E+
Sbjct: 225 SYPREV 230



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           SA DE     DS G VY WG+  C           +     ID  LP+P   L+S+L + 
Sbjct: 26  SAQDE----CDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKP---LESNLVLD 78

Query: 267 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           V    C  K    V+   G V+ +G    G LG    G  +  +RPR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALVM-KNGEVFTWGEDSGGRLG---HGTREDCVRPRLVESLTVSNVDFV 134

Query: 323 STGLYHTVVVTDRGRLFGFGD 343
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTTGELYTWGD 155


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 12/303 (3%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P L+ AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPELIGALAGQHIVHVAC 91

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 169
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 347
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 348 QLG 350
           QLG
Sbjct: 326 QLG 328



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 20/266 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G N + FL   G V+TCG NT GQLGH     +P        E +G+     +V 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP--------ELIGALAGQHIVH 88

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ +A++  G V+S+G+GS+  LG     D +  PR I+   ++ I  +++S G+
Sbjct: 89  VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGN 146

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWG+   G LG G E   +  P+ + SL      QV A    +F L 
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D    +    P  +  LR+  V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIF 364
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E ++      I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---ELIGALAGQHIVHVACGESHSVAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQVF+ G  S    G       +  PRL++ L      Q++ G      L   G   
Sbjct: 100 SDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  S
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           +  LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   +  T   V  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLA 264
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG    G      +P ++ +L   H+  ++ G  H+V ++D+G++F +G     QLG
Sbjct: 63  KGQLGHESEGS-----KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGL 374
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 152/350 (43%), Gaps = 25/350 (7%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 193
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 494 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 551

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            D   P+ ++    +   +V V+ G  H + +  SG  + +GK   G LG     ++  P
Sbjct: 552 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAP 609

Query: 254 EPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS------- 302
                ++  L  Q C   R     T  L     ++ FG   +G LG      S       
Sbjct: 610 ---VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQL 666

Query: 303 --DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 667 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 183 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 433 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 487

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 295
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 488 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 547

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 548 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTME 604

Query: 356 GCLEPTEI 363
             L P ++
Sbjct: 605 NQLAPVQV 612



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 10/285 (3%)

Query: 70  QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 491

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 245
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 492 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 549

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
           D ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++
Sbjct: 550 DSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGID--TMENQL 607

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 608 APVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 652



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 153/353 (43%), Gaps = 30/353 (8%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 58
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 409 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 467

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 468 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 119 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 527 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTVSG 585

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 232
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 586 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 641

Query: 233 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 642 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 701

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G +Y FG    G LG  D   +++V  P  +D      ++ ++ G YHTVV+T
Sbjct: 702 GVMYVFGRNNHGQLGTGD--TTERVY-PFPIDDFVGKRIALVAAGFYHTVVLT 751


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIIH 89

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIF 364
           F FG     QLGHD++   + P  + 
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVL 290



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 321 GCGARGQLG 329



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 100

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  IHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 265

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                S K H+   + +   +TFVL
Sbjct: 324 ARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVL 378


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+    V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-TTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRFKYHIVKQIFSGGDQTFVL 377


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 405

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 523

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 583

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 584 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 640

Query: 339 FGFGDNERAQLGH 351
           + +G     +LGH
Sbjct: 641 YTWGKGSNGRLGH 653



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 60
           +  G YH+  ++ S  +++ G    G+LGHG E +  V   R+NF     HV  ++    
Sbjct: 403 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KRVNFLMEGIHVSSIACGPY 461

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 462 HTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 520

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   +  P  +A L E  +  Q+A G S  
Sbjct: 521 VMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHSLT 579

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L S 
Sbjct: 580 VALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS--FVEEIACGAYHVAVLTSR 637

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 638 TEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 669



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 20/221 (9%)

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           V  V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V 
Sbjct: 345 VLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV- 403

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKR 272
            + G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C    
Sbjct: 404 -ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PY 461

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            T V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V
Sbjct: 462 HTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAV 518

Query: 333 TD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +             G+LF +GD ++++LGH      L PT
Sbjct: 519 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 559



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 397 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 454

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 455 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 514

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 571

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 572 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 624



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 138/340 (40%), Gaps = 21/340 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+      FS G    G LGHG ++   V   + I+  +  ++  V+  E H+  
Sbjct: 355 GQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVACGEYHSCA 412

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V  SG ++T G       GH +        R+   ++G+    +  G   T  +T  G +
Sbjct: 413 VTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQL 472

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 172
            T G  T G LGHGD      P+ +  L+               +VV++  G S   +  
Sbjct: 473 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNC 531

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G G    LGHG++  +L P  +           +V+ G    VAL +SG+VY
Sbjct: 532 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSGHVY 589

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           T G    G LG+     K        L      ++        VL     VY +G    G
Sbjct: 590 TMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            LG  D   +D    P +++SL+   V  I+ G   T  V
Sbjct: 650 RLGHGD---ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 456 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 514

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 573

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 632

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 633 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 676



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 331 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388

Query: 253 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 445

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 446 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 497


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 371

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 489

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 549

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 550 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 606

Query: 339 FGFGDNERAQLGH 351
           + +G     +LGH
Sbjct: 607 YTWGKGSNGRLGH 619



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 60
           +  G YH+  ++ S  +++ G    G+LGHG E +  V   R+NF     HV  ++    
Sbjct: 369 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KRVNFLMEGIHVSSIACGPY 427

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 428 HTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 486

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   +  P  +A L E  +  Q+A G S  
Sbjct: 487 VMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHSLT 545

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L S 
Sbjct: 546 VALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS--FVEEIACGAYHVAVLTSR 603

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 604 TEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 635



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 20/221 (9%)

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           V  V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V 
Sbjct: 311 VLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV- 369

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKR 272
            + G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C    
Sbjct: 370 -ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PY 427

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            T V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V
Sbjct: 428 HTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAV 484

Query: 333 TD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +             G+LF +GD ++++LGH      L PT
Sbjct: 485 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 525



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 363 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 420

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 421 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 480

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 537

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 538 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 590



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 138/340 (40%), Gaps = 21/340 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+      FS G    G LGHG ++   V   + I+  +  ++  V+  E H+  
Sbjct: 321 GQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVACGEYHSCA 378

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V  SG ++T G       GH +        R+   ++G+    +  G   T  +T  G +
Sbjct: 379 VTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQL 438

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 172
            T G  T G LGHGD      P+ +  L+               +VV++  G S   +  
Sbjct: 439 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNC 497

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G G    LGHG++  +L P  +           +V+ G    VAL +SG+VY
Sbjct: 498 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSGHVY 555

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           T G    G LG+     K        L      ++        VL     VY +G    G
Sbjct: 556 TMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            LG  D   +D    P +++SL+   V  I+ G   T  V
Sbjct: 616 RLGHGD---ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 422 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 480

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 539

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 598

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 599 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 642



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 297 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS  V + R+  
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNE-VSHWVPK-RVNF 412

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 413 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 463


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVC 268
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 127 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 176
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 155/316 (49%), Gaps = 25/316 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HAA V + G+VF+ G+ S    GH  D++ P   P+L+E+L     + V  
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 371

Query: 111 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 167
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 430

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 225
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 431 TAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 488

Query: 226 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 489 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTL-VEPNCQVACGHSMTV 547

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            L  +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R
Sbjct: 548 ALSRSGHVYTMGSCVYGQLG---NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSR 604

Query: 336 GRLFGFGDNERAQLGH 351
             +F +G     +LGH
Sbjct: 605 TEVFTWGKGANGRLGH 620



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 127/274 (46%), Gaps = 22/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+N P    HV  +S  
Sbjct: 369 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-KRVNGPLEGIHVSSISCG 427

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  SGQ+FT GD +    GH D  + +  PR +E+LKG+   Q   G+  T  +
Sbjct: 428 PWHTAVVTSSGQLFTFGDGTFGALGHGD-RKSVSLPREIESLKGLRTVQAACGVWHTAAV 486

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +  L E     Q+A G S
Sbjct: 487 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN--CQVACGHS 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A++ +G VY+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 545 MTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKS--FVEEIACGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALK 636



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           GSNF    G + D L P+A+++     + V  ++ G +H   +   G V++WG+   G L
Sbjct: 291 GSNF----GVKMDSLLPKALESAVV--LDVQNIACGGKHAALVTKQGEVFSWGEESGGRL 344

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 300
           GHG + D   P+ + SL +     V   +  T  +  +G +Y  G G   +G LG  ++ 
Sbjct: 345 GHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ- 403

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VS  V + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 404 VSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLP 462

Query: 361 TEI 363
            EI
Sbjct: 463 REI 465



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT ++++S  +F+ G    G LGHG    + VS  R I        VQ +    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVW 481

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +  P  V  L    C QV
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV-PTCVVTLVEPNC-QV 539

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  L+  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 540 ACGHSMTVALSRSGHVYTMGSCVYGQLGNTQA-DGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    V+++G G+N  LGHG+ +D   P  ++  + K +  +
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSI 643



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           +F+ G    G LGHG + ++ V    +         QV+   +    + +SG V+T G  
Sbjct: 504 LFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN--CQVACGHSMTVALSRSGHVYTMGSC 561

Query: 78  SSFCCGHR--DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                G+   D   PI   R+   L     +++  G      LT R  V T G   +G+L
Sbjct: 562 VYGQLGNTQADGKLPI---RVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRL 618

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           GHGDT DR TP  +  L++   V  IA G ++  A+
Sbjct: 619 GHGDTNDRNTPTLVEALKD-KQVKSIACGTNFTAAI 653



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 57
           Q+  G   T+ +S S  V++ GS + G LG+    TQ      I      S + V +++ 
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLGN----TQADGKLPIRVEGKLSKSFVEEIAC 593

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +    +VFT G  ++   GH DTN     P LVEALK    K +  G NFT  
Sbjct: 594 GAYHVAVLTSRTEVFTWGKGANGRLGHGDTN-DRNTPTLVEALKDKQVKSIACGTNFTAA 652

Query: 118 LTIRGHV 124
           + +   V
Sbjct: 653 ICLHKWV 659


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 346

Query: 112 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 464

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 524

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 525 LTTSGQVFTMGSTVYGQLGNLQ---TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 581

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH  L     PT
Sbjct: 582 EVYTWGKGANGRLGHGDLEDRKVPT 606



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 344 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 404 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 462

Query: 120 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 463 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 521

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 522 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 579

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 580 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 621



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 270 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 329

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 330 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 389

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 390 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 448

Query: 265 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 449 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 505

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 369
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 506 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 565

Query: 370 E 370
           E
Sbjct: 566 E 566


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 112 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQ---TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 120 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 265 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 369
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 370 E 370
           E
Sbjct: 561 E 561


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 112 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 120 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 265 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 369
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 370 E 370
           E
Sbjct: 561 E 561


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 153/317 (48%), Gaps = 25/317 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G++F+ G+ +    GH   +  +  P+L+EAL     + V  G
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGH-GVDSDVLHPKLIEALSNTNIELVACG 370

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGI-HVSYISCGPWHT 429

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAACGVWHTAAVVEV 487

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKT 274
                     SSG ++TWG G  G LGHGD+  K +P    L ++K +     C     T
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSL-T 546

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L   G VY  G   +G LG P    +D  L   +   L    V +I+ G YH  V+T 
Sbjct: 547 VALTTKGHVYTMGSPVYGQLGIPQ---ADGKLPICVEWKLSESFVEEIACGAYHVAVLTS 603

Query: 335 RGRLFGFGDNERAQLGH 351
           R  ++ +G     +LGH
Sbjct: 604 RTEVYTWGKGANGRLGH 620



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 129/274 (47%), Gaps = 20/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+  CG+LGHG + +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP-KRVNGPLEGIHVSYISCG 425

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 426 PWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLKGLRTVRAACGVWHTAAV 484

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A +    +  Q+A G S
Sbjct: 485 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHS 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T  G VY+ GS     LG   Q D   P  ++ ++     V  ++ G  HV  L 
Sbjct: 545 LTVALTTKGHVYTMGSPVYGQLGI-PQADGKLPICVE-WKLSESFVEEIACGAYHVAVLT 602

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 636



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           G  +D   PKS+     V  V  IA G  +   VT  G ++S+G  +   LGHG   D L
Sbjct: 293 GVKMDSLFPKSLESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVL 351

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE- 254
            P+ I+      I +V  + G+ H  A+  SG +YTWG G   CG LGHG+++   +P+ 
Sbjct: 352 HPKLIEALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKR 409

Query: 255 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
              PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR +
Sbjct: 410 VNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPREV 463

Query: 312 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 359
           +SL+     + + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 464 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 523

Query: 360 PTEIFI 365
           PT + +
Sbjct: 524 PTRVAL 529



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 24/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G+G+  C  LGHG Q     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG-PLEGIH 418

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 419 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 478

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+    K++  R+       + 
Sbjct: 479 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTRVALVNVKPNF 536

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEP--TEIFIQEM 368
            Q++ G   TV +T +G ++  G     QLG     G    C+E   +E F++E+
Sbjct: 537 CQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEI 591



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 479

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-- 106
           H A V++            SG++FT GD      GH D    +   R+  AL  V     
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV--ALVNVKPNFC 537

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV  G + T  LT +GHV+T GS  +GQLG     D   P  +        V +IA G  
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQA-DGKLPICVEWKLSESFVEEIACGAY 596

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 643



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 10/175 (5%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASE 59
           +++  G   +   S+  +F+ G    G LGHG +  + V  TR+   +   +  QV+   
Sbjct: 485 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TRVALVNVKPNFCQVACGH 543

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTG 116
           +    +   G V+T G       G    D   PI    +L E+      +++  G     
Sbjct: 544 SLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESF----VEEIACGAYHVA 599

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            LT R  V+T G   +G+LGHGDT DR TP  +  L++   V  IA G ++  A+
Sbjct: 600 VLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKD-KDVKSIACGTNFTAAI 653



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSA 57
           Q+  G   T+ L +   V++ GS + G LG      +   CV +      S + V +++ 
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKL----SESFVEEIAC 593

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTNFTAA 652

Query: 118 LTIRGHV 124
           + +   V
Sbjct: 653 ICLHKWV 659


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA  V + G++F+ G+ S    GH      +  P+L++ L G+  + V  G N T  +T 
Sbjct: 309 HAVLVTKPGEIFSWGEESGGRLGH-GIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G   +  G LGHG       PK I    E   V  ++ GP +  AVT  G ++
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 225
           +FG G+   LGHG+      PR ++T R  G+  +RVS G  H  A              
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLR--GLRTIRVSCGVWHTAAAVEITTESSSPGGS 485

Query: 226 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
              + G ++TWG G    LGHGD+  +  PE + +L      QV      T  L   G V
Sbjct: 486 GSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRV 545

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y  G   +G LG P    + KV  P I++  +    + +I+ G YH  V+T +  ++ +G
Sbjct: 546 YTMGSTSYGQLGNPR--ATGKV--PAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWG 601

Query: 343 DNERAQLGHDTLRGCLEPTEI-FIQEME 369
                QLGH   +   +PT + F+++ +
Sbjct: 602 KGTNGQLGHGDNKDRNQPTVVDFLRDKQ 629



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 123/269 (45%), Gaps = 22/269 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G  HT  ++ S     +  G+  CG+LGHG E +  +           HV  VS   
Sbjct: 355 VACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGP 414

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 117
            H A V   GQ+FT GD +    GH D +     PR VE L+G+   +V+ G+  T    
Sbjct: 415 WHTAAVTSVGQLFTFGDGTFGALGHGDHSSATV-PREVETLRGLRTIRVSCGVWHTAAAV 473

Query: 118 -LTIR------------GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
            +T              G + T G+    +LGHGD   R  P+ +  L +  ++ Q+A G
Sbjct: 474 EITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGD-ENICQVACG 532

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +  LA+T  G VY+ GS S   LG+     ++   AI   +  G  +  ++ G  HV  
Sbjct: 533 HNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVP--AIVEGKIAGKIIEEIACGSYHVAV 590

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           L S   VYTWGKG  G LGHGD  D+  P
Sbjct: 591 LTSKAEVYTWGKGTNGQLGHGDNKDRNQP 619



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 22/277 (7%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F P+ +E+   +    +  G      +T  G + + G  + G+LGHG   D P PK I  
Sbjct: 287 FLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDT 346

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 209
           L  + ++  +A G ++  AVT +G +Y++G G+  C  LGHG +     P+ I     +G
Sbjct: 347 LAGM-NIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEG 404

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           IHV  VS G  H  A+ S G ++T+G G  GALGHGD    T+P  + +L+    ++V  
Sbjct: 405 IHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSC 464

Query: 270 RKRKTFVLVDT---------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
               T   V+                G ++ +G      LG  D+   +  L P  + +L
Sbjct: 465 GVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDK---EPRLFPECVVAL 521

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              ++ Q++ G   T+ +T  GR++  G     QLG+
Sbjct: 522 GDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGN 558



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 25/230 (10%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G +HT  +++   +F+ G    G LGHG  ++  V    +        ++VS    H
Sbjct: 410 VSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVP-REVETLRGLRTIRVSCGVWH 468

Query: 62  AAFVLQS---------------GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            A  ++                G++FT G+   +  GH D    +F P  V AL      
Sbjct: 469 TAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLF-PECVVALGDENIC 527

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAAG 164
           QV  G N T  LT  G V+T GS ++GQLG+     R T K  A +E    G +++  A 
Sbjct: 528 QVACGHNLTLALTAAGRVYTMGSTSYGQLGN----PRATGKVPAIVEGKIAGKIIEEIAC 583

Query: 165 PSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            SY +AV T    VY++G G+N  LGHG+  D  QP  +   R K +  V
Sbjct: 584 GSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAV 633



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   P+A+++     +H +  + G  H V +   G +++WG+   G LGHG + D   P+
Sbjct: 285 DAFLPKALESKVVLDVHYI--ACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPK 342

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + +L       V   +  T  +  +G +Y +G  G  + G    G       P RI   
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWG-DGAYNCGLLGHGSEASHWIPKRIGGD 401

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   HVS +S G +HT  VT  G+LF FGD     LGH        P E+
Sbjct: 402 MEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREV 451


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  130 bits (327), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 167/342 (48%), Gaps = 24/342 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           Q+  G+Y T +I +   V +CG +  G LG G  + Q V   RIN      + QVS+S  
Sbjct: 377 QVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVP-KRINI--NCKIKQVSSSKG 433

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEA-LKGVPCKQVTAGLNF 114
            + H+  +  +G+V++ GD      GH D  T++    P+L++    G   + V+AG   
Sbjct: 434 CDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHK---EPKLIQGPFIGKVIELVSAGYRH 490

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  +T  G ++T G   HG+LGHGD   R  P  +  L ++  V  +A G ++ LA + +
Sbjct: 491 SAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDM-PVGYVACGSTHTLACSRD 549

Query: 175 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           G  V+SFGSG N  LGHG      +P+ I+  R   I   +V+AG    VAL  +G V+T
Sbjct: 550 GNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIK--KVAAGIHFSVALTCTGEVFT 607

Query: 234 WGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG+G    LG G  EI    P  +  L   + + +         L    +VY +G  G G
Sbjct: 608 WGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKG 665

Query: 293 SLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G   +G S   V RP  + +L    ++QIS G  H+V  T
Sbjct: 666 QCG---QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVAWT 704



 Score =  129 bits (325), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 12/294 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTA 110
           VV+   ++N A       +VF  G NSS    H +    +   PRLV +L  V  +QV A
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSS--NQHAEGATEVTDIPRLVRSLSDV--QQVEA 380

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   T  +  +G V  CG N++G+LG G++ ++P PK I    ++  V        + LA
Sbjct: 381 GQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLA 440

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++  G VYS+G G    LGHG+     +P+ IQ  F  K I +  VSAG  H  A+ S G
Sbjct: 441 LSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL--VSAGYRHSAAVTSDG 498

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGW 288
            +YTWG+G  G LGHGD   + +P  + SL    +    C          D  +V+ FG 
Sbjct: 499 QLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGS 558

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
              G LG    G + ++ +P+ ++ LR + + +++ G++ +V +T  G +F +G
Sbjct: 559 GDNGKLG---HGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWG 609



 Score =  111 bits (278), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 22/331 (6%)

Query: 11   LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS---ASENHAAFVLQ 67
            +L S  +V SCG    G LGHG  +    + T I+      + QVS    S+ H+  + +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHG-HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE 3498

Query: 68   SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            +G+VF+ GD      GH +  R   +P+L+E+L  V   QV  G   +  L+  G V+  
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557

Query: 128  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
            GS  HG+LG G  +++  P  I   +   ++  IA G ++ + + G  VV++FG G    
Sbjct: 3558 GSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGK 3615

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LG G + D   P+ I T   K I   +   G+   + L   G +Y+     CG+    D 
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIK--KAYCGNGFTMFLSEDGELYS-----CGSDNLQDA 3668

Query: 248  ID-----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             D     K +PE +   +  +   V        VL   G V+ +G    G LGF   G  
Sbjct: 3669 TDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGF---GHD 3725

Query: 303  DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
              V +P I+  L   ++ QI+T   H    T
Sbjct: 3726 LPVQKPMIIQILSDKNIKQIATSRTHCAAWT 3756



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 148/314 (47%), Gaps = 18/314 (5%)

Query: 45   NFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
            NF  A  +V       +  FVL S G V +CG+ +    GH  ++  +    ++ AL+G 
Sbjct: 3424 NFKIAQRIV----CGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDS-LPNLTMISALQGF 3478

Query: 104  PCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
               QV+  +   G    LT  G V + G    G+LGHG+   +  PK I  L +V  V+Q
Sbjct: 3479 VITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDV-VVIQ 3537

Query: 161  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
            +A G  +   ++ +G VY FGS  +  LG G   ++ +P  I    +  +++  ++ G  
Sbjct: 3538 VACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI--VHKGFLNIKYIACGQN 3595

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            H + +  +  V+ +G+G  G LG G + D  +P+ + +L      +       T  L + 
Sbjct: 3596 HTICIGEN-VVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSED 3654

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            G +Y  G          D   ++K++  +I +  +   V+ ++TG  H +V+T RG ++ 
Sbjct: 3655 GELYSCGSDNLQDA--TDVLYTEKLIPEKIFE-FQGQIVTDVATGPDHVLVLTARGHVWA 3711

Query: 341  FGDNERAQL--GHD 352
            +G+N    L  GHD
Sbjct: 3712 WGNNCEGILGFGHD 3725



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 15/242 (6%)

Query: 128  GSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            G+  +GQLG    G  ++  +P  I   +      +I  G +    +T  G V S G G+
Sbjct: 3398 GNGRNGQLGDTAVGQCINIWSPIKI---QNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGN 3454

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGA 241
               LGHG  H +  P        +G  + +VS     D H +AL  +G V++WG G  G 
Sbjct: 3455 YGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGK 3512

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P+ + SL   + +QV    + + VL   G VY FG    G LG    G 
Sbjct: 3513 LGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGL---GG 3569

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                 RP  +      ++  I+ G  HT+ + +   ++ FG+ E  +LG  + +    P 
Sbjct: 3570 HINKKRPTKIVHKGFLNIKYIACGQNHTICIGE-NVVWAFGEGEGGKLGIGSKKDIYVPQ 3628

Query: 362  EI 363
            EI
Sbjct: 3629 EI 3630



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 11/239 (4%)

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GSN+  Q   G T     P+ +  L +V    Q+ AG      +   G V + G  S   
Sbjct: 348 GSNSSNQHAEGATEVTDIPRLVRSLSDVQ---QVEAGQYCTFIIDTKGCVSACGKNSYGR 404

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGALGHGD 246
           LG G   ++  P+ I    +  I  V  S G D H +AL  +G VY+WG G  G LGHGD
Sbjct: 405 LGLGNSSNQPVPKRININCK--IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGD 462

Query: 247 EIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
                 P+ +       +   V A  R +  +   G +Y +G    G LG  D    +  
Sbjct: 463 VATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGD---CNPR 519

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             P ++ SL    V  ++ G  HT+  + D   ++ FG  +  +LGH       +P +I
Sbjct: 520 FIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKI 578


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 169/386 (43%), Gaps = 28/386 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 60
           G YH    +   VF  G S+C  +  G   +   +   +  P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGK 296

Query: 61  -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HA  V + G++F+ G+              + +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 120 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQL 415

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 225
           ++FG GS   LGHG++     PR ++     G+ V +V+ G  H  AL            
Sbjct: 416 FTFGDGSFGALGHGDRRSTSVPREVKIL--SGLIVTKVACGVWHTAALVEVTNEASEAEV 473

Query: 226 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             S G V+TWG G  G LGHGD   + LPE + SL +    QV      T  L  TG VY
Sbjct: 474 GSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVY 533

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 345 ERAQLGHDTLRGCLEPTEI-FIQEME 369
              QLGH T+    EP  + F++E +
Sbjct: 591 LNGQLGHGTIENKREPAVVGFLKEKQ 616



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS---FTRI--NFPSA 49
           +  G +HT ++++S  +F+ G    G LGHG       P   + +S    T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLL-PECVISLSNENICQVA 517

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 164
            G + T  LT  GHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN------PTAKGNFPARVEGDIVEASVEEIACG 571

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    +Y++G G N  LGHG   ++ +P  +   + K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAI 620


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 26  SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 83

Query: 106 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 84  KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 142

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 200

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 201 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 260

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 261 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEME 369
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 318 GDNDHGQQGNGTTTVNRKPT--LVQGLE 343



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 132/262 (50%), Gaps = 9/262 (3%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 152
           P   E L  +   QV  G      +T+ G V++CG  T+G+LG G  +   P P+ I  L
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 153 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 79  SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 138

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 269
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 139 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 196

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 197 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 253

Query: 330 VVVTDRGRLFGFGDNERAQLGH 351
           + +T  G ++ +G  +  +LGH
Sbjct: 254 LALTKSGVVWTWGKGDYFRLGH 275



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1137

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 1138 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 1196

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1197 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1254

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1255 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1314

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1315 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES 1124

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1125 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1243

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1244 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1301 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1329



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 119/248 (47%), Gaps = 8/248 (3%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A  
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGG 1137

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGF 117
             H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  
Sbjct: 1138 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLC 1196

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G V
Sbjct: 1197 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAV 1255

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG  
Sbjct: 1256 YTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDN 1313

Query: 238  YCGALGHG 245
              G LG G
Sbjct: 1314 DEGQLGDG 1321



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1044

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1045 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAK 1104

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1164

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1165 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1221

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 1222 CKVPMKI 1228



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 92  GRHATALTVDGKVFSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKRIRDIACGSSHSAAL 150

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 151 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 268

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 269 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 326

Query: 244 HG 245
           +G
Sbjct: 327 NG 328



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 198

Query: 62  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 199 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 257

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 258 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 316

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 359



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1247

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1248 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1306

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1352



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 979  DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1038

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1039 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ +  +LGH     C  P  I
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVI 1122



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPR 309
           +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR
Sbjct: 20  SFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL---GMSSGTVPIPR 73

Query: 310 ILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 74  QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 129


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 21/329 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G +++ G  TH  G LGHG+ +    PK ++   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRN 372

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
            +F +G     +LGH  +     PT + +
Sbjct: 373 EVFTWGKGANGRLGHGDIEDRKVPTLVEV 401



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 120/275 (43%), Gaps = 22/275 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +  ++S G      G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVL 368

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
                V+TWGKG  G LGHGD  D+ +P  +  LK
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLK 403



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 20/276 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT  G +YS+G G++    LGHG       P+ + +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALE 182

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 261
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 262 ----HLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
               H A  V+V   +  + V +  G ++ +G      LG  D+   +  L+P  + +L 
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK---ETRLKPTCVATLI 299

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            H   +++ G   TV +T  G++   G+    QLG+
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGN 335



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
            +  V  + G+ H  A+ ++G +Y+WG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVA 187

Query: 267 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 326 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 142/342 (41%), Gaps = 24/342 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 67  QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G++++ GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 172
            T G  + G LGHGD      P+ +  L                ++V++    S      
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKL 265

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V 
Sbjct: 266 SAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQVL 323

Query: 233 TWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + G    G LG  H D     L E    +     +Q+        VL     V+ +G   
Sbjct: 324 SMGNAVYGQLGNPHSDGRIPCLVE--DKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGA 381

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            G LG  D  + D+ + P +++ L+   V  I+ G   T  +
Sbjct: 382 NGRLGHGD--IEDRKV-PTLVEVLKDRAVRYIACGANFTAAI 420



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 15/224 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVIQIACGSYHVA 366

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 367 VLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYI 410



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRTDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWG-DGTHNVGLLG 164

Query: 299 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            G       P R+  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 358 LEPTEI 363
             P E+
Sbjct: 225 SYPREV 230



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGA---------LGHGDEIDKTLPEPLSSLKSHLAVQ 266
           SA DE     DS G VY WG+  C           +      D  LP+P   L+S+L + 
Sbjct: 26  SAQDE----CDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKP---LESNLVLD 78

Query: 267 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           V    C  K    V+ + G V+ +G    G LG    G  +  +RPR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALVMKN-GEVFTWGEDSGGRLGH---GTREDCVRPRLVESLTVSNVDFV 134

Query: 323 STGLYHTVVVTDRGRLFGFGD 343
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTTGELYSWGD 155


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2952 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKK 3011

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3012 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3070

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3071 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3128

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3129 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3188

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P+I++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3189 WTWGKGDYFRLG---HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3245

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3246 NDHGQQGNGTTTVNRKPT--LVQGLE 3269



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4030

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4031 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4149

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4150 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4207 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4235



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2980

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +     P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2981 ATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3040

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3041 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3098

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3099 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3155

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3156 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3203



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4043

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4044 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4102

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4103 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4160

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4220

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4221 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 19/306 (6%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S+  V Q+  SE     + +SG V+T    S+              P L+  L      +
Sbjct: 400 SSTGVTQIVCSEKVFLILSRSGAVYTQNYKST-----------TLAPMLIHGLSSRKIVK 448

Query: 108 VTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGS-VVQIA 162
           + A  +   FL +   G V++ G    G+LGHGD   L+ P   +    ++ G  VVQIA
Sbjct: 449 LAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIA 508

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G +Y  AVT +G +Y++G G+   LGHG   D   P  +   + + +  V   +GD   
Sbjct: 509 CGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQT 568

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   G 
Sbjct: 569 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 628

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           VY +G      LG    G  + V  P++LDSL+   V  I+ G  H + +TD G +  +G
Sbjct: 629 VYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685

Query: 343 DNERAQ 348
            N++ Q
Sbjct: 686 SNDKLQ 691



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 111/202 (54%), Gaps = 9/202 (4%)

Query: 158 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 213
           +V++AA P   + LA++ +G VYS+G G    LGHG+     +P  I TF  ++ G  VV
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVV 505

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 271
           +++ G  +  A+ + G +YTWG+G  G LGHG   D T P  +++LK    V V   +  
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 566 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 332 VTDRGRLFGFGDNERAQLGHDT 353
           +T  G+++ +G  +  +LGH T
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGT 644



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 119/246 (48%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 3987 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 4045

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T  LT
Sbjct: 4046 SACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTLCLT 4104

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4105 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4163

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4221

Query: 240  GALGHG 245
            G LG G
Sbjct: 4222 GQLGDG 4227



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3950

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3951 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4010

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4011 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4067

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4127

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4128 CKVPMKI 4134



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3018 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3076

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3077 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3135

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3136 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3194

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3195 DYFRLGHGTDVHVRKPQIVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3252

Query: 244  HG 245
            +G
Sbjct: 3253 NG 3254



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPET---TQCVSFTRINFPSAAHVVQVSASENHA 62
           G++   L ++  V+S G    G LGHG  T      +  T     +   VVQ++    ++
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 120
           A V   G+++T G  +    GH  ++  +  P LV ALKG     V  G      L +  
Sbjct: 515 AAVTADGELYTWGRGNYGRLGH-GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE 573

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY++
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYTW 632

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G N  LGHG       P+ + +   +G  VV ++ G  H +AL   G V++WG     
Sbjct: 633 GKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDIAVGSTHCLALTDEGEVHSWGSN--D 688

Query: 241 ALGHGDEI--DKTLPEPLSSLKS 261
            L H D +  +K  P+ L  L S
Sbjct: 689 KLQHFDTLFPNKKQPKALPGLNS 711



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 19/209 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QI       L ++ +G VY+    S            L P  I     + I  +    
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYTQNYKST----------TLAPMLIHGLSSRKIVKLAAHP 453

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL----AVQVCARKRK 273
             +H +AL +SG VY+WG G  G LGHGD      P  +++          VQ+      
Sbjct: 454 DGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+ V  P ++ +L+   V  ++  +G   T+ 
Sbjct: 514 SAAVTADGELYTWGRGNYGRLG---HGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLA 570

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           VT+ G+++ +GD +  +LG     GC  P
Sbjct: 571 VTENGQVWSWGDGDYGKLGRGGSDGCKTP 599



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3066 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3124

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3125 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3183

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3184 KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3242

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3285



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4153

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4154 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4212

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4213 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4258



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3871 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3918

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3919 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLE 3975

Query: 313  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P  I
Sbjct: 3976 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 4028


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLG     D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 20/294 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 239 CGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
            G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 21/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 112 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  +  GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  V+   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGP 398

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-RETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 120 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIAC 616



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 21/301 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+HV  V+ G  H   + S G ++T+G G  G LGHGD      P  + SL     
Sbjct: 385 C-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRT 443

Query: 265 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 369
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 370 E 370
           E
Sbjct: 561 E 561



 Score = 37.7 bits (86), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L ++  VF+ GS++ G LG+     +          S   V ++S    H A +    +V
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASE-FVEEISCGAYHVAALTSRNEV 578

Query: 72  FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +T G  ++   GH D  +R +  P LVEALK    K +  G N+T  + +   V
Sbjct: 579 YTWGKGANGRLGHGDLEDRKV--PTLVEALKDRHVKYIACGSNYTAAICLHKWV 630


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P++   +     K+V  G N + FL   G V+TCG NT GQLGH    ++P  + I 
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 126

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L +  ++V +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ 
Sbjct: 127 ALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 268
           I  ++VS G+ H +AL + G  +TWGK   G LG G E   +  P+ + SL+     QV 
Sbjct: 186 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 243

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+V+ +G    G LG  D    +    P  +  LR   V  IS G  H
Sbjct: 244 AGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCGEEH 300

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T V+T  G +F FG     QLGHD++   + P  + 
Sbjct: 301 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 336



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 77  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQN 132

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 191

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 249

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 250 FALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 309

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 310 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 366

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 367 GCGARGQLG 375



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  ++V V+  E+H+  +
Sbjct: 90  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQNIVHVACGESHSLAL 146

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 147 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 206

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+++G  +
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFAWGMNN 265

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 266 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 323

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 324 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 375



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 134 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 193 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 252

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 253 SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 311

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 312 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 369

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 370 ARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFVL 424


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 1799 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1917

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1918 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQTL 1975

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1976 ALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VT+ G++F +GD
Sbjct: 2036 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGD 2092

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2093 NDHGQQGNGTTTVNRKPT--LVQGLE 2116



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 1827

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 1828 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 1887

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG---RGGSEGC 2002

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2050



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G +++ G    G+LGHG+      P+ I  
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES 2898

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV IAAG ++   +T +G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2899 LRGV-EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3017

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3075 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3103



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G++++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 2911

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 2912 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLC 2970

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3028

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3088

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 3089 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 2818

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G +Y+WG+  
Sbjct: 2819 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE 2878

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +  +G +Y +G   +G LG   
Sbjct: 2879 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG--- 2935

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2936 HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 2995

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 2996 CKVPMKI 3002



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1923

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 2099

Query: 244  HG 245
            +G
Sbjct: 2100 NG 2101



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 114/281 (40%), Gaps = 60/281 (21%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   ++S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 2855 VNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 2913

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------------- 102
            +A +  SG+++T G       GH D+   + +P+LVEAL+G                   
Sbjct: 2914 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTLCLT 2972

Query: 103  -------------------------VPCK----------QVTAGLNFTGFLTIRGHVHTC 127
                                     VP K          +V  G  F+  LT  G V+T 
Sbjct: 2973 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTW 3032

Query: 128  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
            G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G      
Sbjct: 3033 GKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3091

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 3092 LGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 3130



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 1971

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1972 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G V++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTETGQVFA 2089

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2753 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 2812

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2813 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L+ +G+ E  +LGH     C  P  I
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVI 2896



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTAEGKVYACG 1826

Query: 288  WMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   +  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 1827 EATNGRLGL---GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1883

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 1884 DDGKLGHFSRMNCDKPRLI 1902


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 149/313 (47%), Gaps = 20/313 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+S    H A V + G+VFT G+ S    GH   +     P+LVE+L       V  G
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH-FTHPKLVESLAVTNIDYVACG 325

Query: 112 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G + T G  SN  G LGHG  +    PK ++ PLE +  V+ IA G  + 
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGL-QVLSIACGTWHS 384

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++FG G+   LGHG++     P+ +Q+    G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL--NGLKTIKVACGVWHTAAIVEV 442

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L 
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALT 502

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G   +G LG P    S+  +   + D L    V +IS G YHT V+T R  +
Sbjct: 503 TSGHVFTMGGSAYGQLGNPS---SNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEV 559

Query: 339 FGFGDNERAQLGH 351
           F +G     QLGH
Sbjct: 560 FTWGRGANGQLGH 572



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 19/298 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +   Q++ G+     +T +G V T G  + G+LGHG       P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           K +  L  V ++  +A G  +  A++ +G ++++G GSN    LGHG       P+ + +
Sbjct: 309 KLVESL-AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRV-S 366

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+ V+ ++ G  H     S+G ++T+G G  GALGHGD    + P+ L SL     
Sbjct: 367 GPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKT 426

Query: 265 VQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
           ++V      T  +V+  S  G        F W G G       G  D  L P  + SL  
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGSNISSRKLFTW-GDGDKHRLGHGNKDAYLLPTCVSSLID 485

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEI---FIQEM 368
           ++  Q++ G   TV +T  G +F  G +   QLG+ +  G   CL    +   F++E+
Sbjct: 486 YNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEI 543



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  IS S     +  GS+  G+LGHG + +  +   R++ P     V+ ++  
Sbjct: 322 VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIP-KRVSGPLEGLQVLSIACG 380

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+A    +G++FT GD +    GH D  + +  P+ +++L G+   +V  G+  T  +
Sbjct: 381 TWHSALATSNGKLFTFGDGTFGALGHGD-RKSVSSPKELQSLNGLKTIKVACGVWHTAAI 439

Query: 119 T----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                          + T G     +LGHG+      P  ++ L +  +  Q+A G +  
Sbjct: 440 VEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDY-NFQQLACGHTMT 498

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  +   LG+   + ++ P  +Q  R  G  V  +S G  H   L S 
Sbjct: 499 VALTTSGHVFTMGGSAYGQLGNPSSNGKI-PCLVQD-RLVGEFVEEISCGAYHTAVLTSR 556

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWG+G  G LGHGD  D+ LP  + +LK
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALK 588



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI+ G  H  L++    VF+ G    G LGHG       P+  + ++ T I++       
Sbjct: 269 QISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDY------- 321

Query: 54  QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V+  E H   +  SG +FT GD  N+S   GH          R+   L+G+    +  G
Sbjct: 322 -VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACG 380

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +   T  G + T G  T G LGHGD     +PK +  L  +   +++A G  +  A+
Sbjct: 381 TWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGL-KTIKVACGVWHTAAI 439

Query: 172 ------TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                 +G+ +    ++++G G    LGHG +   L P  + +      +  +++ G   
Sbjct: 440 VEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSL--IDYNFQQLACGHTM 497

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            VAL +SG+V+T G    G LG+     K        L      ++      T VL    
Sbjct: 498 TVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRS 557

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            V+ +G    G LG  D    D+ L P ++++L+  HV  +S G   T  +
Sbjct: 558 EVFTWGRGANGQLGHGD--TEDRKL-PTLVEALKERHVKNLSCGANFTSSI 605



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 30/253 (11%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G +H+ L  SN  +F+ G    G LGHG +     S   +   +    ++V+   
Sbjct: 375 LSIACGTWHSALATSNGKLFTFGDGTFGALGHG-DRKSVSSPKELQSLNGLKTIKVACGV 433

Query: 60  NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            H A +++          S ++FT GD      GH + +  +  P  V +L     +Q+ 
Sbjct: 434 WHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLL-PTCVSSLIDYNFQQLA 492

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAG 164
            G   T  LT  GHV T G + +GQLG+      P+     P       VG  V+ I+ G
Sbjct: 493 CGHTMTVALTTSGHVFTMGGSAYGQLGN------PSSNGKIPCLVQDRLVGEFVEEISCG 546

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             +   +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  +S G      
Sbjct: 547 AYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKER--HVKNLSCG----AN 600

Query: 225 LDSSGYVYTWGKG 237
             SS  ++ W  G
Sbjct: 601 FTSSICIHKWVSG 613


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 134/245 (54%), Gaps = 8/245 (3%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G +  LGHG +    +P+ I++ R K   V  ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIESLRTK--RVRDIACGSSHSAAITSSGELYTWGLGEYG 3061

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3118

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            RG S+    P  ++ L +  V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3119 RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3178

Query: 359  EPTEI 363
            +PT I
Sbjct: 3179 KPTPI 3183



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 21/321 (6%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2911 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2967

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 2968 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIES 3027

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     V  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ + T   +G  
Sbjct: 3028 LR-TKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTL--QGHR 3084

Query: 212  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L S   +Q+  
Sbjct: 3085 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIEC 3144

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3201

Query: 330  VVVTDRGRLFGFGDNERAQLG 350
            + VTD G+++ +GDN+  Q G
Sbjct: 3202 LAVTDSGQVYAWGDNDHGQQG 3222



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 155/329 (47%), Gaps = 17/329 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3956 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSAPT 4014

Query: 96   LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 151
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4015 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4072

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4073 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4131

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + +     V++WG G  G LG G      +P  + SL     ++V    
Sbjct: 4132 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGS 4191

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4192 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4248

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4249 CSDSGEVFTWGDNDEGQLGDGTVTAIQRP 4277



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4084

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4145 ITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGS 4202

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG+      P+ +++L+    + +           D+G V+ +G   
Sbjct: 4203 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDND 4262

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4263 EGQLG---DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 25/339 (7%)

Query: 20  SCGSSLCGVLGHGPE-TTQCV------SFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 72
           SC   + G +      TTQ +      S   I  PS   V QV+ +EN+   +   GQVF
Sbjct: 486 SCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVF 545

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--NFTGFLTIRGHVHTCGSN 130
           +   NSS              P+  E L+GV   Q+ A         L+    V + G+ 
Sbjct: 546 SLHSNSS----------ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAG 595

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             G+LGHGDT+ +  P  I  L E   V  I  G SY  A+T  G ++++G G+   LGH
Sbjct: 596 DGGRLGHGDTVSKEHPTMIVGLHE-KQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGH 654

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D+L P  +Q  +   +  V + +GD H + +  +G ++ WG G  G LG+G     
Sbjct: 655 GNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS 714

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
            +P  + +L +    ++ +  + +  L   G++Y +G    G LG    G S+    P++
Sbjct: 715 PIPVQIDTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLG---HGNSEHSNVPKL 769

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           + +L    ++ ++ G  H + +T  G L+G+G N+  Q+
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 31/344 (9%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 52
            + I  G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2928 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2978

Query: 53   ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 108
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIESLRTKRVRDI 3036

Query: 109  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 166
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3037 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQG-HRVVQVACGSRDA 3095

Query: 167  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
              L +T  G+V+S+G G    LG G       P  ++  R   + V+++  G +  +AL 
Sbjct: 3096 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNSVGVMQIECGAQFSLALT 3153

Query: 227  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             SG V+TWGKG    LGHG +     P P+  L+    + V         + D+G VY +
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAW 3213

Query: 287  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3214 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3254



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            I   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 2890 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 2946

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LGHG+ +    P+ + SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3066

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3067 DNCTQ---LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3123

Query: 356  GCLEPTEI 363
            GC  P ++
Sbjct: 3124 GCSVPHQV 3131



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 13/277 (4%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L S+  VFS G    G LGHG       S+ R   I   S   V+ ++    H+
Sbjct: 4033 GKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVIDIACGSAHS 4088

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
            A +   G V T G       GH D+   + +P+LVEAL G     +  G      L I  
Sbjct: 4089 ACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDAQTLCITD 4147

Query: 123  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G VY++
Sbjct: 4148 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGSQFSVALTRSGSVYTW 4206

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG V+TWG    G
Sbjct: 4207 GKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVFTWGDNDEG 4264

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
             LG G       P  + SL+    V+V      T  L
Sbjct: 4265 QLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 128  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 3943 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 3998

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 3999 GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4059 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4115

Query: 305  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4116 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMK 4175

Query: 363  I 363
            I
Sbjct: 4176 I 4176



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 15/222 (6%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P+  A   E+ S +Q+       +A T N +      G  F L H    + + P+A +  
Sbjct: 510 PRYSAATIELPSTLQV-----RQVACTENNIYILTTGGQVFSL-HSNSSENIAPKAFEGL 563

Query: 206 RRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
             +G+HVV+++A  E  HV+ L S+  V++WG G  G LGHGD + K  P  +  L    
Sbjct: 564 --EGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQ 621

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
              +      +  +   G ++ +G   +G LG    G SD  L P  + +L+++ V  ++
Sbjct: 622 VCGIYCGASYSAAITIAGELFTWGRGTYGRLG---HGNSDDKLVPTQVQALKSYKVVDVA 678

Query: 324 --TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H++ VTD G LF +GD +  +LG+ +  G   P +I
Sbjct: 679 LGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQI 720


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 162/359 (45%), Gaps = 24/359 (6%)

Query: 16  SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 68
           SS+++ G S  G  G G       PE  Q +            VV  +    ++AFV + 
Sbjct: 37  SSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQ--------GKDVVHAAGGSYNSAFVTRD 88

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+++T G N +   G +        P  V AL+      V  G      +   GH+   G
Sbjct: 89  GELYTTGSNDARQLGVKG-REVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWG 147

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           SN +GQLG G+         +          ++AAG ++ LA+T +G VYSFG GS   L
Sbjct: 148 SNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGAL 207

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG+ ++  +P  +Q    + I  V ++AG+    A+  SG V+TWG+   G LG+G+  
Sbjct: 208 GHGDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFG 265

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGVSDK 304
           +  LP+P+  ++   AVQV         L   G VY +G    G LG         ++  
Sbjct: 266 NAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGC 323

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +  P  +DSL    + Q+S G  H+  V+   +L+G G N+  QL   ++     PT +
Sbjct: 324 LCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRV 382



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 16/300 (5%)

Query: 6   GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           G Y++  ++ +  +++ GS+    LG  G E    +   R++     +V  V+  + H  
Sbjct: 78  GSYNSAFVTRDGELYTTGSNDARQLGVKGREV--ALEPIRVSALEMNNVHGVACGQGHML 135

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            V+ +G +   G N     G  +      +PR+++ ++G    +V AG   +  LT  G 
Sbjct: 136 AVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++ G  + G LGHGD  +R  P  +  L    ++V IAAG  +  AV+ +G V+++G  
Sbjct: 196 VYSFGEGSFGALGHGDVNNRAKPTLVQALWPE-AIVSIAAGEYFSAAVSLSGRVFTWGRN 254

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG+GE  +   P+ +    +     V+V+ GD H +AL   G VYTWG    G LG
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGIEQ----AVQVACGDHHCIALTRWGEVYTWGLHSSGQLG 310

Query: 244 HGDEIDKTL-------PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  +           P  + SL      QV A  R +F +     ++G G    G L  
Sbjct: 311 QGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLAL 370



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           G+    PTP    P+E  G   Q++ A P    AV+    +Y++G       G G   + 
Sbjct: 4   GEDSRPPTPSE--PMEADGMERQLSWALPELPPAVSS---LYTWGRSDLGQTGSGRDQNS 58

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEP 255
             P  +Q    +G  VV  + G  +   +   G +YT G      LG  G E+    P  
Sbjct: 59  TAPEPVQAL--QGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREV-ALEPIR 115

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +S+L+ +    V   +     +VD G +  +G   +G LG  + G S    +PR+L  +R
Sbjct: 116 VSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGAS--AAQPRVLKRIR 173

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             H ++++ G  H++ +T  G+++ FG+     LGH  +    +PT +
Sbjct: 174 GAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLV 221



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G Y +  +S S  VF+ G +  G LG+G       +F     P     VQV+  +
Sbjct: 230 VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGN---AFLPQPVPGIEQAVQVACGD 286

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH------RDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +H   + + G+V+T G +SS   G          N  +  P  V++L     +QV+AG  
Sbjct: 287 HHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGAR 346

Query: 114 FTGFLTIRGHVHTCGSNTHGQL 135
            + F++    +   G+N  GQL
Sbjct: 347 HSFFVSPGEQLWGAGANDEGQL 368


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSNYVV 3051

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3285

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVVKVECGSQFSVALTKSGA 4222

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGS 4211

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS            I  P+LV++L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSD-----------ILGPQLVQSLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  +  G  H + +T+   ++ +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAH 4107

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4108 SACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4166

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  VG VV++  G  + +A+T +G VY+
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVKVECGSQFSVALTKSGAVYT 4225

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 240  GALGHG 245
            G LG G
Sbjct: 4284 GQLGDG 4289



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V+++ G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVSCGSQFSVALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V AG  H +AL     VY+W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGEKVIDVVAGSTHCLALTEDSEVYSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T P+P
Sbjct: 735 GSN--DQCQHFDTLRITKPDP 753



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYSWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  ++ V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 244  HG 245
            +G
Sbjct: 3295 NG 3296



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DILGPQLVQSLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     ++ +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIIHVAVGALHCLAVTDTGQVYA 3284

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H V+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVS 3327



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVVKVECGSQFSV 4215

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+VS     + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           V++ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VYSWGSNDQCQ--HFDTLRITKPDPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 21/184 (11%)

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
            F     E+ D+ +       R+K       ++G E V  + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------TSGLESVATIRTK--VFVWGLNDKDQLGGL 2979

Query: 244  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLS 3033

Query: 303  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 360  PTEI 363
            P  I
Sbjct: 3094 PRLI 3097


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 141 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 268
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G    G LG  P T + +   R I   +   +VQ++    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVPRNIKSLTDIQIVQIACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 161/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2987 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3105

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3106 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3163

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G+V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3164 ALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3223

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3224 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3280

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3281 NDHGQQGNGTTTVNRKPT--LVQGLE 3304



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3015

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3016 ATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3075

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3076 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3133

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3134 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLG---RGGSEGC 3190

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3191 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3238



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 23/308 (7%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S+  V Q+  SE     +  SG V++    S+              P L+  L      +
Sbjct: 440 SSLGVTQIVCSEKGFLILSSSGAVYSQNYKST-----------TLAPMLIHVLSSRKIVK 488

Query: 108 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 162
           + A  +   +L +   G V + G    G+LGHGDT     PK I     ++ G  VV +A
Sbjct: 489 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVA 548

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 220
            G +Y  A+T +G +Y++G G+   LGHG   D+  P  +  F  KG+ VV V+  +GD 
Sbjct: 549 CGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAF--KGLKVVDVACGSGDA 606

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   
Sbjct: 607 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 666

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G VY +G      LG    G  + V  P++LDSL+   V  ++ G  H + +TD G +  
Sbjct: 667 GQVYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLS 723

Query: 341 FGDNERAQ 348
           +G N++ Q
Sbjct: 724 WGSNDKLQ 731



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4087 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGS 4205

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4206 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4263 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4291



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4099

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4100 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4158

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4216

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4276

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4277 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 158 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 213
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P+ I TF  ++ G HVV
Sbjct: 486 IVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVV 545

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 271
            V+ G  +  A+ + G +YTWG+G  G LGHG   D+T P  +++ K    V V   +  
Sbjct: 546 HVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGD 605

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 606 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 662

Query: 332 VTDRGRLFGFGDNERAQLGHDT 353
           +T  G+++ +G  +  +LGH T
Sbjct: 663 LTKDGQVYTWGKGDNQRLGHGT 684



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 119/246 (48%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4043 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 4101

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T  LT
Sbjct: 4102 SACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTLCLT 4160

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4161 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4219

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4220 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4277

Query: 240  GALGHG 245
            G LG G
Sbjct: 4278 GQLGDG 4283



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3053 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3111

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3230 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3287

Query: 244  HG 245
            +G
Sbjct: 3288 NG 3289



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   + AVT +G +Y+ G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPV-QLIGGEQTLFAVTADGKLYATG 4009

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+   G 
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG    G 
Sbjct: 4070 LGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG---HGD 4126

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4127 SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI 4186

Query: 360  PTEI 363
            P +I
Sbjct: 4187 PMKI 4190



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 61
           G+++  L SN  VFS G    G LGHG +TT       I       +  HVV V+    +
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 120
           +A +   G+++T G  +    GH  +      P +V A KG+    V  G      L + 
Sbjct: 554 SAAITADGELYTWGRGNYGRLGHGSSEDQT-TPMVVTAFKGLKVVDVACGSGDAQTLAVT 612

Query: 121 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 671

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G N  LGHG       P+ + +   +G  VV V+ G  H +AL   G V +WG    
Sbjct: 672 WGKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDVAVGSTHCLALTDDGEVLSWGSN-- 727

Query: 240 GALGHGDEI--DKTLPEPLSSLKS 261
             L H D +  +K  P+ L  L S
Sbjct: 728 DKLQHFDTLFSNKKQPKALPGLNS 751



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3159

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3160 AQTLALTDEGFVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3277

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3320



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 21/210 (10%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QI       L ++ +G VYS    S            L P  I     + I  +    
Sbjct: 444 VTQIVCSEKGFLILSSSGAVYSQNYKST----------TLAPMLIHVLSSRKIVKLAAHP 493

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 272
             +H +AL S+G V++WG G  G LGHGD      P+ + +        H+    C    
Sbjct: 494 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 330
              +  D G +Y +G   +G LG    G S+    P ++ + +   V  ++  +G   T+
Sbjct: 554 SAAITAD-GELYTWGRGNYGRLG---HGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            VT+ G+++ +GD +  +LG     GC  P
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRGGSDGCKTP 639



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4268

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4269 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4314


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G + + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     + +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LRA  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   +H+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ RG + + G+ + GQLG   T +    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T + V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 141 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 268
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G    G LG  P T + +   R I   +   +VQ++    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVPRNIKSLTDIQIVQIACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 24/362 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 71  VFTCGDNSSFCCGHR-DTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           V+ CG N     GH   T RP   P  L+  L+     Q+  G   +  L+  G V + G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            N  GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 121 DNDCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 183 GSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
                LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  C
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNC 232

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    
Sbjct: 233 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---H 289

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           G S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  +
Sbjct: 290 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLM 349

Query: 359 EP 360
            P
Sbjct: 350 LP 351



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 14/303 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 58
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +  P      ++Q+   
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  L
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           T  G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G
Sbjct: 164 TSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSG 222

Query: 176 VVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T
Sbjct: 223 AV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 278

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFG 292
            G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G
Sbjct: 279 CGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSG 338

Query: 293 SLG 295
            LG
Sbjct: 339 QLG 341



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 98  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 155

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 112
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 156 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 212

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 213 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 271

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 231
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 329

Query: 232 YTWGKGYCGALGHGDEIDKTLPE 254
           Y +G G  G LG        LP+
Sbjct: 330 YAFGLGSSGQLGTRSTKSLMLPQ 352



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 181 GSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           GS     LGH    +   + P  +    +  + ++++  G  H +AL   G V +WG   
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYV-IIQICCGSRHSLALSDWGQVLSWGDND 123

Query: 239 CGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           CG LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 183

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
                     P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +     
Sbjct: 184 SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR 243

Query: 358 LEPTEI 363
             PT++
Sbjct: 244 SYPTQL 249



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 151 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 210

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 211 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 268

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 174
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 326

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           G VY+FG GS+  LG       + P+ +
Sbjct: 327 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 38.1 bits (87), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)

Query: 282 SVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            +Y +G    G LG    G+ D ++L P  +       V Q++ G  HT+ +T  G+++ 
Sbjct: 6   ELYCWGSTSHGQLGLG--GIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63

Query: 341 FGDNERAQLGHD--TLRGCLEPTEIFIQEMEE 370
            G N+ +QLGHD  T R  + P  + I E+++
Sbjct: 64  CGSNDYSQLGHDLPTKRPRMSPF-LLIPELQD 94


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 17  SVFSCGSSL---CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           SVFS G +     G+ G G +     S   +   +   + ++S    H   +L+ G V  
Sbjct: 2   SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
           CG N     G    +RP      V A + +   QV+ G + T  +T RG V   G N  G
Sbjct: 62  CGANDR---GQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 134 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           Q  L  GD+ D+  P+ +  L     V Q+A G  + +A+T +G ++++G  S   LG G
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSC-QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG 177

Query: 192 EQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
                L    P+ + +    G+ + R++ G  H  AL  SG V+ WGK  CG LG G   
Sbjct: 178 APGRTLYRDHPQQLSSL--PGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTE 235

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
           D+  P PL +LK+     +   +  T +L  +G ++ FG    G LG    G     + P
Sbjct: 236 DRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLG---HGSHSNEVNP 292

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG--HDTLRGCLEP 360
           R +       ++Q++ G  HT+V+  R GR F  G   + QLG  +D+ + C  P
Sbjct: 293 RSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASP 347



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 15/276 (5%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPL 152
           PR V AL G   ++++ GL  T  L   G V  CG+N  GQLG     DRP +  +  P 
Sbjct: 29  PREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQ----DRPGSELAHVPA 84

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGI 210
            E   + Q++ G  + LAVT  G V  +G        L  G+  D+ +PR +++      
Sbjct: 85  TETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSL--SSC 142

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQV 267
            V +V+ G  H +AL   G ++ WG    G LG    G  + +  P+ LSSL      ++
Sbjct: 143 QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRL 202

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                 +F L  +G+V+G+G    G LG    G ++  + P  L +L+   V  I+ G  
Sbjct: 203 ACGGWHSFALSVSGAVFGWGKNNCGQLGL---GTTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +T ++T  G LF FG     QLGH +    + P  +
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSV 295



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 13/247 (5%)

Query: 124 VHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           V + G    GQLG    GD +   +     P      + +I+ G  +   +  +G V   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK--- 236
           G+     LG      EL    A +T     + + +VS G++H +A+   G V  WG+   
Sbjct: 63  GANDRGQLGQDRPGSELAHVPATET-----LVITQVSCGNDHTLAVTDRGQVLGWGRNDR 117

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G CG L  GD  DK  P  L SL S    QV      +  L   G ++ +G   FG LG 
Sbjct: 118 GQCG-LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGI 176

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G +     P+ L SL    + +++ G +H+  ++  G +FG+G N   QLG  T   
Sbjct: 177 GAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236

Query: 357 CLEPTEI 363
            + PT +
Sbjct: 237 RVSPTPL 243



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 133/341 (39%), Gaps = 54/341 (15%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G +H+  +S S +VF  G + CG LG G  T   VS T +       V  ++  +N
Sbjct: 201 RLACGGWHSFALSVSGAVFGWGKNNCGQLGLG-TTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           + A +  SG +F  G  S    GH   +  +  PR V+   G    QV  G   T  L  
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEV-NPRSVQGFLGSEITQVACGRQHTLVLEG 318

Query: 121 R-GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVTGN 174
           R G   + G  + GQLG    LD  + KS A     P E   S    + G      +   
Sbjct: 319 RTGRFFSLGQGSKGQLG----LDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSII--- 371

Query: 175 GVVYSFGSGSNFCL---GHGEQH------------------DELQP-----------RAI 202
           G +++ G   +FC+   G+   H                  D LQ            +A+
Sbjct: 372 GSIFA-GGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAV 430

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
           QT     + +   +  +   +    SG ++ +G+G  G LGHG   ++  P  +     +
Sbjct: 431 QTLE---MALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGN 487

Query: 263 LAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVS 302
              QV   ++ T VL   TG  Y  G    G LG  D G S
Sbjct: 488 EITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGL-DNGSS 527



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 51/327 (15%)

Query: 2   QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 58
           Q+  GR HTL++   +   FS G    G LG   ++++ C S     + + +     S  
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFT 115
           E   + +   G +F  GD S FC   R  D + P+ FR    EA+  +    +T  L   
Sbjct: 365 EESRSII---GSIFAGGDQS-FCIVSRGNDPDHPLDFR----EAIPSIEPVVLTKDL--- 413

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
                             ++     L  P+ K++  LE   ++   A   +  L   G+G
Sbjct: 414 ----------------LQEVSESSPLLEPS-KAVQTLEM--ALSSPACLNASFLVGAGSG 454

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTW 234
            ++ FG GS   LGHG   +E+ PR+++ F   G  + +V+ G +H + L+  +G  Y+ 
Sbjct: 455 GLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSL 512

Query: 235 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           G+G  G LG  +   K+    +P P  +  S    + C+   ++  ++  GS++  G   
Sbjct: 513 GQGSKGQLGLDNGSSKSCASLVPGPWEAPSS---TEGCSNGEESRSII--GSIFAGGDQS 567

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAH 317
           F  +    RG    +L   ++ +++ H
Sbjct: 568 FCIV---SRGNISGILNTHLIPTIQKH 591


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 20/266 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G +   FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 37  KEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP--------EQIGALADQHIIH 88

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 146

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 147 WHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIF 364
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  Q     +I   +  H++ V+  E+H+  +
Sbjct: 43  GDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFF 159

Query: 126 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 304 KVLRPRILDSLRAHHVSQIS 323
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   +H  F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN----QPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G++FT G+ S    GH    R + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTM 349

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G + T G  TH  G LGHG  +    PK I+ PLE +  V  +  GP +   VT    +
Sbjct: 350 AGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTTTRQL 408

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 226
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSASV 466

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V   
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 526

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNPQ---SDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 347 AQLGHDTLRGCLEPT 361
            +LGH  +     PT
Sbjct: 584 GRLGHGDIEDRKTPT 598



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +  +F+ G      G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  + Q+FT GD +    GH D +   + PR VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY-PREVESLSGLRTIAVACGVWHTAAV 454

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L E  +  ++A G S 
Sbjct: 455 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEY-NFQKVACGHSL 513

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V + GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGQVCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIAC 613



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 21/227 (9%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  IA G  +   VT  G ++++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFT 332

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAV- 265
            +    V+ G+ H  A+  +G ++TWG G    G LGHG ++   +P+ +S     L V 
Sbjct: 333 SVDF--VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 390

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      T ++  T  ++ FG   FG LG  D+   D V  PR ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDK---DNVAYPREVESLSGLRTIAVACG 447

Query: 326 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  P+ +E+   +    +  G+     +T +G + T G  + G+LGHG   D   P
Sbjct: 264 TRADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L    SV  +A G  +  AVT  G ++++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRI-S 381

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 261
              +G+ V  V+ G  H   + ++  ++T+G G  G LGHGD+ +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRT 441

Query: 262 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
                   H A  V     ++   V +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           L  ++  +++ G   TV +T  G++   G     QLG+    G L
Sbjct: 499 LIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKL 543



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     +H   ++ G  H   +   G ++TWG+   G LGHG   D   P 
Sbjct: 267 DLLLPKPLESNVVLDVH--HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 324

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + SL       V   +  T  +   G ++ +G  G  + G    G       P RI   
Sbjct: 325 LVESLAFTSVDFVACGEFHTCAVTMAGELFTWG-DGTHNAGLLGHGTDVSHWIPKRISGP 383

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    V+ ++ G +HT +VT   +LF FGD     LGH        P E+
Sbjct: 384 LEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREV 433


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 167/346 (48%), Gaps = 23/346 (6%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           VF+CG +  G LGH     Q V  + +       +V+V+A    + F+ + G+V+ CG N
Sbjct: 42  VFACGQNRKGELGHSTFREQ-VEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLN 100

Query: 78  SSFCCGHR----DTNRPIFRPRLVEALKGVP--CKQVTA----GLNFTGFLTIRGHVHTC 127
           S+            NR       +E ++G+P  CK V      G      +T  G V++C
Sbjct: 101 STGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSC 160

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVYSFGSGSN 185
           G N HGQLG G T   P   S+  +E +  V  ++A  SY   + V+ +G  +SFG    
Sbjct: 161 GCNNHGQLGLGSTKMSP---SLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDC 217

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG G + ++L P  ++       H+VR++A G  H + L   G V++ GK   G LG 
Sbjct: 218 GQLGIGTRPNQLLPHRVEL---PSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGL 274

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G      +P  +++L+   A  +      T V+++ G ++ FG+   G LG    G +D 
Sbjct: 275 GSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGL---GHTDS 331

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           V  P  +++LR   V +IS G + T V+++ G L+ FG N   QLG
Sbjct: 332 VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLG 377



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 20/177 (11%)

Query: 6   GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------VSAS 58
           G+YHT+ ++    VFSCG +L G LG G       S +  N P+    +Q      ++  
Sbjct: 248 GQYHTIFLTEEGMVFSCGKNLNGQLGLG-------SRSSTNVPTLIAALQERPASMIACG 300

Query: 59  ENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            +H   VL+ G++FT G N       GH D+   +  P  VE L+ V   +++ G +FT 
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS---VSSPMQVETLRNVKVVKISCGTHFTC 357

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            L+  G + + G N HGQLG GD+ DR  P  + P     ++ +IA G  +++A++G
Sbjct: 358 VLSESGELWSFGCNCHGQLGLGDSTDRLVP-VLVPSMTKKNLSEIACGFHHLVAISG 413



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 16/202 (7%)

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           G+  V++ G      LGH    ++++   +Q+ RRK   +V+V+AG E    L   G VY
Sbjct: 38  GDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRK--RIVKVAAGSETSYFLTEEGKVY 95

Query: 233 TWGKGYCGALGHGD-----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             G    G L                 D  L E L      + V          V+   G
Sbjct: 96  CCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAG 155

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            VY  G    G LG     +S  +L   +++SL+   V   S   +H+VVV+  G  F F
Sbjct: 156 QVYSCGCNNHGQLGLGSTKMSPSLL---LVESLKHVRVLSASCSYHHSVVVSSDGSAFSF 212

Query: 342 GDNERAQLGHDTLRGCLEPTEI 363
           G N+  QLG  T    L P  +
Sbjct: 213 GLNDCGQLGIGTRPNQLLPHRV 234


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2761 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-AKRIRDIACGS 2879

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 2880 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 2937

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2938 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2997

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2998 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3054

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3055 NDHGQQGNGTTTVNRKPT--LVQGLE 3078



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2790 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2849

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 2850 LGHFSRMNCDKPRLIEALKAKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 2907

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2908 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2964

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2965 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3012



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 23/308 (7%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 412 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKMVK 460

Query: 108 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 162
           + A  +   +L +   G V + G    G+LGHGDT     P  IA    ++ G  VV IA
Sbjct: 461 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIA 520

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 220
            G +Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 521 CGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 578

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   
Sbjct: 579 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 638

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G VY +G      LG    G  + V  P++LD+L+   V  ++ G  H + +TD G +  
Sbjct: 639 GQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 695

Query: 341 FGDNERAQ 348
           +G N++ Q
Sbjct: 696 WGSNDKLQ 703



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 20/294 (6%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 3905

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 3906 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 3964

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T + +V+S+G G    LG G       P  I +    G+ V++V  G +  VAL  SG 
Sbjct: 3965 LTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSL--TGLGVIKVECGSQFSVALTKSGA 4022

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-- 288
            VYTWGKG    LGHG +     P  +  L+    + +           + G +  F W  
Sbjct: 4023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082

Query: 289  ----MGFGSL--------GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                +G G +        G    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3892

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 3893 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G       P  + SL     ++V    
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGS 4011

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4068

Query: 332  VTDRGRL-----------------FGFGDNERAQLGHDTLRGCLEP 360
             T+ GR+                 + +GDN+  QLG  T      P
Sbjct: 4069 CTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRP 4114



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 9/202 (4%)

Query: 158 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 213
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P  I  F  ++ G HVV
Sbjct: 458 MVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVV 517

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 271
            ++ G  +  A+   G +YTWG+G  G LGHG   D+T P  +++LK    V V   +  
Sbjct: 518 HIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGD 577

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 578 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 634

Query: 332 VTDRGRLFGFGDNERAQLGHDT 353
           +T  G+++ +G  +  +LGH T
Sbjct: 635 LTKDGQVYTWGKGDNQRLGHGT 656



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 17/265 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFN--GKQAGKHVVHIACGST 524

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 583

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 642

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 699

Query: 239 CGALGHGDEI--DKTLPEPLSSLKS 261
              L H D +  +K  P+ L  L S
Sbjct: 700 -DKLQHFDTLFSNKKQPKALPGLNS 723



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3812

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3872

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 3873 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 3929

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3930 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 3989

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3990 CKTPMKI 3996



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3061

Query: 244  HG 245
            +G
Sbjct: 3062 NG 3063



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 2933

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2934 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2992

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2993 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3094



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 21/210 (10%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QI       L ++ +G VY+    S            L P  I +   + +  +    
Sbjct: 416 VTQIVCSEKGFLILSSSGAVYTQNYKST----------TLAPMLIHSLSSRKMVKLAAHP 465

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 272
             +H +AL S+G V++WG G  G LGHGD      P  +++        H+    C    
Sbjct: 466 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTY 525

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 330
              + VD G +Y +G   +G LG    G S+    P ++ +L+   V  ++  +G   T+
Sbjct: 526 SAAITVD-GELYTWGRGNYGRLG---HGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            VT+ G+++ +GD +  +LG     GC  P
Sbjct: 582 AVTENGQVWSWGDGDYGKLGRGGSDGCKTP 611



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3733 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3780

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3781 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLE 3837

Query: 313  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P  I
Sbjct: 3838 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 3890


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 9/303 (2%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V+ VS   +H+  +L  G V + G       GH   ++    P  + AL       V 
Sbjct: 10  ARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQ-CTSPTCIAALTDAGVDAVV 68

Query: 110 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G  +T    + RG +++ G    G+LGHG+  D   P+ IA       V ++A G ++ 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGR-PVARVACGDTHT 127

Query: 169 LAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           L VT G+G +Y+FG   N  LG G  +D L P+ +     +G  V  V+ G EH +A   
Sbjct: 128 LVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTAL--QGERVSSVACGSEHSLAATE 185

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V++WG G  G LG GD  D+  P  +  L       V    R + V+ D G V+ FG
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFG 245

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           W  +G LG  D    D   RP ++  L+   VS ++ G  HT+     G L+ +G N+  
Sbjct: 246 WSKYGQLGHGDH--VDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFG 302

Query: 348 QLG 350
           QLG
Sbjct: 303 QLG 305



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 160/366 (43%), Gaps = 23/366 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSAS 58
           + ++ G  H++ L+    V S G    G LGHG +  QC S T I   + A V   V  +
Sbjct: 13  LGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           E   A     GQ+++ G       GH +    +F PR +    G P  +V  G   T  +
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG-DVFVPRPIAFFSGRPVARVACGDTHTLVV 130

Query: 119 TI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           T   G ++T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T  G V
Sbjct: 131 TQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGE-RVSSVACGSEHSLAATEAGTV 189

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +S+G G    LG G+  D   P  +      G+ V  V  G  H   +   G V+T+G  
Sbjct: 190 FSWGWGRYGNLGDGDSQDRYTPTRVVGL--DGVTVTSVVCGWRHSAVVTDEGRVFTFGWS 247

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LGHGD +D T P  ++ L+      V    R T      G++Y +GW  FG LG  
Sbjct: 248 KYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLG 307

Query: 298 DRGVSDKVLRPRILDSLRA------------HHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           D   S+    P  +                   V+ ++ G  HTV VT+ G ++ +G   
Sbjct: 308 D---SEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGV 364

Query: 346 RAQLGH 351
             QLGH
Sbjct: 365 NGQLGH 370



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 15/260 (5%)

Query: 2   QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++  G  HTL+++  + ++++ G +  G LG G  T  C+S   +       V  V+   
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLG-HTNDCLSPQLVTALQGERVSSVACGS 177

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+    ++G VF+ G       G  D+ +  + P  V  L GV    V  G   +  +T
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDS-QDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G + +GQLGHGD +D   P  +A L+    V  +A G  + +A    G +Y+
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC-RVSTVAGGWRHTMAADSEGNLYA 295

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGI----------HVVRVSAGDEHVVALDSSG 229
           +G      LG G+  D   P  +  F   G            V  ++ G  H VA+  +G
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355

Query: 230 YVYTWGKGYCGALGHGDEID 249
            VY+WG+G  G LGHG E D
Sbjct: 356 EVYSWGRGVNGQLGHGAEQD 375



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 7/213 (3%)

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
           +E   V+ ++ G S+ +A+   GVV S+G G +  LGHG+      P  I      G+  
Sbjct: 7   QEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDA 66

Query: 213 VRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V   A  E+ VA+ SS G +Y+WG G  G LGHG+  D  +P P++        +V    
Sbjct: 67  VVCGA--EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGD 124

Query: 272 RKTFVLVD-TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             T V+    G++Y FG    G LG    G ++  L P+++ +L+   VS ++ G  H++
Sbjct: 125 THTLVVTQGDGALYTFGRNQNGQLGL---GHTNDCLSPQLVTALQGERVSSVACGSEHSL 181

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             T+ G +F +G      LG    +    PT +
Sbjct: 182 AATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 5/166 (3%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 270
           V+ VS G  H +AL   G V +WG+G  G LGHG     T P  +++L  + +   VC  
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
           +    V    G +Y +GW  FG LG  + G    V  PR +       V++++ G  HT+
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG---DVFVPRPIAFFSGRPVARVACGDTHTL 128

Query: 331 VVTD-RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           VVT   G L+ FG N+  QLG      CL P  +   + E  + +A
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 10/314 (3%)

Query: 42   TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 100
            T ++F  S   VVQ   +   A+ V Q+  V+  G N     G    ++ I  P   E L
Sbjct: 2894 TSVSFLASDWEVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSK-IKLPVHSEVL 2952

Query: 101  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 159
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + +   V
Sbjct: 2953 SKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKV 3012

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
             + +G  + LA+T +G V+S+G G +  LGHG +    +PR I+  + K I    ++ G 
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIR--DIACGS 3070

Query: 220  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 277
             H  A+ S+G +YTWG G  G LGHGD      P+ + +L     +QV   +R  +T  L
Sbjct: 3071 GHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130

Query: 278  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
             + GSVY +G   FG LG   RG SD    P  +D L    V Q+  G   ++ +T  G 
Sbjct: 3131 TEDGSVYSWGDGDFGKLG---RGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187

Query: 338  LFGFGDNERAQLGH 351
            ++ +G  +  +LGH
Sbjct: 3188 VWTWGKGDYFRLGH 3201



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 13/311 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA   +Q++  E     V   G+V+  G  +      G  D+   +  P L+E+++ V  
Sbjct: 3925 SALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDS---VMVPTLLESIQHVFI 3981

Query: 106  KQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 162
            K+V   +G      L+  GHV++ G    G+LGHG+ +    PK I  L  +G+ +V IA
Sbjct: 3982 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL--LGTEIVDIA 4039

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +  A++  G +Y++G G    LGHG+  D+L+P  +   +   +  V   +GD   
Sbjct: 4040 CGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQT 4099

Query: 223  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            + +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+
Sbjct: 4100 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGA 4159

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G ++ +G
Sbjct: 4160 VYTWGKGDYHRLG---HGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWG 4216

Query: 343  DNERAQLGHDT 353
            DN+  QLG  T
Sbjct: 4217 DNDEGQLGDGT 4227



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 11/291 (3%)

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 122
            V Q G+++ CG+ ++   G  D N  +  P+ +  L     K+V   +G      LT  G
Sbjct: 2970 VSQEGKLYACGEGTNGRLGLGDNNN-VGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDG 3028

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LGHG+ +    P+ I  L+    +  IA G  +  A+  NG +Y++G 
Sbjct: 3029 KVFSWGEGEDGKLGHGNRVSLDKPRLIEALKS-KRIRDIACGSGHSAAIASNGELYTWGL 3087

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCG 240
            G    LGHG+    L+P+ +      G  V++V+ G  D   +AL   G VY+WG G  G
Sbjct: 3088 GEYGRLGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFG 3145

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LG G       P P+  L     VQV    + +  L   G V+ +G   +  LG    G
Sbjct: 3146 KLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG---HG 3202

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                V RP +++ LR   V  ++ G  H + VTD G+++ +GDN+  Q G+
Sbjct: 3203 NDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGN 3253



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 155/329 (47%), Gaps = 18/329 (5%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +         I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2976 LYACGEGTNGRLGLG-DNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWG 3034

Query: 76   DNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
            +      GH   NR  + +PRL+EALK    + +  G   +  +   G ++T G   +G+
Sbjct: 3035 EGEDGKLGH--GNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092

Query: 135  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 191
            LGHGDT     PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3093 LGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG 3150

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
                   P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3151 GSDGCYSPLPVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3208

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
             P  +  L+    V V         + D G VY +G    G  G     V+ K   P ++
Sbjct: 3209 RPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRK---PSLV 3265

Query: 312  DSLRAHHVSQISTGLYHTV--VVTDRGRL 338
             +L    V++++ G  H++  V+TD+  L
Sbjct: 3266 HNLEDAKVNRVACGSSHSIAWVLTDQPTL 3294



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 16/323 (4%)

Query: 14   SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 69
            ++  V++ G    G LG G   +  V        S  HV    V V++   H   +   G
Sbjct: 3944 ADGKVYATGYGALGRLGTGGVDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSSEG 4000

Query: 70   QVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
             V++ G+      GH   NR  + RP+L+EAL G     +  G + +  ++  G ++T G
Sbjct: 4001 HVYSWGEGDDGKLGH--GNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWG 4058

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
               +G+LGHGD+ D+  P  +  L+    + V   +G +  L VT +  V+S+G G    
Sbjct: 4059 KGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4118

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LG G       P  I++    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG +
Sbjct: 4119 LGRGGSDGCKVPMKIESL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTD 4176

Query: 248  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
                 P  +S+L+    V +           D G VY +G    G LG    G +     
Sbjct: 4177 DHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG---DGTTHAQQS 4233

Query: 308  PRILDSLRAHHVSQISTGLYHTV 330
            PR++ +L+  ++++++ G  HT+
Sbjct: 4234 PRLVHALQGKNITRVACGSAHTL 4256



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3949

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+ I    P+ + +L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4010 DGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD 4069

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               SD  L+P ++ +L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4070 ---SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4126

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4127 CKVPMKI 4133



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 2980

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3040

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ +    P  + +LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3041 LGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTT 3100

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                L+P+++D+L    V Q++ G     T+ +T+ G ++ +GD +  +LG     GC  
Sbjct: 3101 H---LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYS 3157

Query: 360  PTEI 363
            P  +
Sbjct: 3158 PLPV 3161



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 13/260 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNR----VSLDKPRLIEALKSKRIRDIACGSGHS 3073

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3074 AAIASNGELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTE 3132

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    +P  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3133 DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3191

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3192 GKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 241  ALGHGDEIDKTLPEPLSSLK 260
              G+G  +    P  + +L+
Sbjct: 3250 QQGNGSTMVNRKPSLVHNLE 3269



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 4/244 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT +G V++ G+   G+LGHGD+     P+ I  L +  +V  IA G +Y  A++  G +
Sbjct: 516 LTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSD-RTVTYIACGSTYSAAISSTGEL 574

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++G GS   LGHG   D   P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 575 LTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDG 634

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G      LP+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 635 DYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLG-- 692

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G  + V  P++++ LR   V  +S G  H + +T+   ++G+G N+  Q+        
Sbjct: 693 -HGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVV 751

Query: 358 LEPT 361
            EPT
Sbjct: 752 SEPT 755



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 25/292 (8%)

Query: 3    ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSAS 58
            + +G  H L +S+   V+S G    G LGHG      +++ R     A     +V ++  
Sbjct: 3986 VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----ITYDRPKLIEALLGTEIVDIACG 4041

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +H+A +  +G ++T G       GH D++  + +P +V AL+G     V  G      L
Sbjct: 4042 GHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPTVVTALQGYKVIDVACGSGDAQTL 4100

Query: 119  --TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              T   +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4101 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VVKVECGSQFSVALTRSGA 4159

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +PR +     +G  +V ++ G  H VA    G VYTWG 
Sbjct: 4160 VYTWGKGDYHRLGHGTDDHVRRPRKVSAL--QGKKIVSIATGSLHCVACSDKGEVYTWGD 4217

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
               G LG G    +  P  + +L+            K    V  GS +   W
Sbjct: 4218 NDEGQLGDGTTHAQQSPRLVHALQG-----------KNITRVACGSAHTLAW 4258



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 6/242 (2%)

Query: 49  AAHVVQVSASEN--HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           A  VVQ+++  +  H   +   G V++ G+      GH D+      P+++E L      
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVLSDRTVT 556

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGP 165
            +  G  ++  ++  G + T G  ++G+LGHG   D   P  +  L     + V   +G 
Sbjct: 557 YIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGD 616

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S  L VT +G+V+S+G G    LG G       P+ +     +  +VV+V  G +   AL
Sbjct: 617 SQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQ--NVVKVFCGGQFSAAL 674

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            + G VYTWGKG    LGHG+E     P+ +  L++     +         + +   VYG
Sbjct: 675 TAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734

Query: 286 FG 287
           +G
Sbjct: 735 WG 736



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L +   V+S G+   G LGHG ++  C     I   S   V  ++    ++A +
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
             +G++ T G  S    GH   +  I  P +V AL G     V   +G + T  +T  G 
Sbjct: 569 SSTGELLTWGRGSYGRLGHGICDD-ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI 627

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G   +G+LG G +     PK +  L +  +VV++  G  +  A+T +G VY++G G
Sbjct: 628 VFSWGDGDYGKLGRGGSDGSKLPKIVDKLLD-QNVVKVFCGGQFSAALTAHGEVYTWGKG 686

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++ LGHG +     P+ ++  R K +    +S G+ H++A+     VY WG+ 
Sbjct: 687 DHYRLGHGNEEHVRFPKLVEGLRNKKVR--DLSVGNLHILAITEDQLVYGWGRN 738



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 17/202 (8%)

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           + E+G V Q+      +L ++ +G VY    GS          +   P+++  F    + 
Sbjct: 455 IAEIG-VKQLCCTERALLILSLSGKVYMMYYGS----------ETQYPQSVYGFADDVVQ 503

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +     G +H +AL + G VY+WG G  G LGHGD      P+ +  L       +    
Sbjct: 504 IASHPDG-KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGS 562

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHT 329
             +  +  TG +  +G   +G LG    G+ D +  P ++ +L  H V+ ++  +G   T
Sbjct: 563 TYSAAISSTGELLTWGRGSYGRLG---HGICDDISIPTVVTALNGHTVTHVACGSGDSQT 619

Query: 330 VVVTDRGRLFGFGDNERAQLGH 351
           + VT+ G +F +GD +  +LG 
Sbjct: 620 LCVTNSGIVFSWGDGDYGKLGR 641



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 17/162 (10%)

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3869 QEHDE---QLLQWLSRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVK 3916

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G  D V+ P +L
Sbjct: 3917 LPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLG---TGGVDSVMVPTLL 3973

Query: 312  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 3974 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 354

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 472

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 532

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 533 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 589

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +     PT
Sbjct: 590 YTWGKGSNGRLGHGDVDDRNSPT 612



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 60
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 410

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 470 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 528

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 529 VALTTSGHVYTMGSPVYGQLGNS-HADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 586

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 618



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 346 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 403

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 463

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 520

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 550



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 405 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 463

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 522

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 581

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 582 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 625



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 274 GSSFDI----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 327

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 328 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 386

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 387 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 445

Query: 363 I 363
           +
Sbjct: 446 V 446


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  E   G   + V  G   T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G S+ LA+   G V+S+G GS+  LG     + ++ PR I++     
Sbjct: 80  ALD-AQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           + V +V+ G  H +AL   G++++WG+   G LG G      ++P+ L SL+     Q+ 
Sbjct: 137 VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+V+G+G   FG LG  D   +D+   P +L +LR+  V  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLND--TNDRCF-PALLKALRSQRVIYISCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R   F     V  V     H AF+L+ G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       ++ G + T  L  +G V + G  + GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNF 121

Query: 141 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 198
            +    P++I  L +V  V Q+A G  + LA++  G ++S+G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +Q+   +GI   +++AG  H  AL  SG V+ WG+   G LG  D  D+  P  L +
Sbjct: 181 PQHLQSL--QGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   + +   +  T  L   G V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGNV 295

Query: 319 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
           V+QI+ G  HT+  T   G++  FG     QLG
Sbjct: 296 VTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 9/293 (3%)

Query: 6   GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           GR HT  L+ + +V++CG +  G LGH     +      ++   A  +V +S  E+H   
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQIIVALSCGESHTLA 98

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +   GQVF+ G  S    G  +    I  PR +++L  V   QV  G   +  L+  GH+
Sbjct: 99  LNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 125 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            + G N +GQLG G T      P+ +  L+ +    QIAAG ++  A+T +G V+ +G  
Sbjct: 159 FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI-PFAQIAAGGAHSFALTLSGAVFGWGRN 217

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG  + +D   P  ++  R +   V+ +S G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDTNDRCFPALLKALRSQ--RVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           H     +  P  +  L  ++  Q+ C R+        +G +  FG  G G LG
Sbjct: 276 HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H+  ++ S +VF  G +  G LG      +C     +    +  V+ +S  E+
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFP-ALLKALRSQRVIYISCGED 252

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 119
           H A + + G VFT G       GH  TN  +  PR V  L G    Q+  G   T  F  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKVFELMGNVVTQIACGRQHTLAFTP 311

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
             G + + G   +GQLG   T +R +P  +
Sbjct: 312 SSGKMDSFGLGGNGQLGTRSTCNRKSPAPV 341


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 147/311 (47%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           + +F +   V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V++ G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   V+S G    G LG             I   S   +VQV+    H
Sbjct: 89  VSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT+ 
Sbjct: 149 SLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G   ++  P
Sbjct: 326 QLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 31  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 88

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 89  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 145

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 205

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 206 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 262

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 263 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 298



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 13/338 (3%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           S+   G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            N     GH  + +   +P  V AL       V  G   T  L  +G V+  G ++ GQL
Sbjct: 69  CNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 136 G-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 193
           G  G       P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G + 
Sbjct: 126 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P
Sbjct: 185 QKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 242

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
             L SL+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  
Sbjct: 243 NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFE 299

Query: 314 LRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           L    V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 300 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 53  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 109

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 110 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 228

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 229 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 286

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 287 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 98  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 155

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 156 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 215

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 216 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 274

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 275 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 332

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 333 NGQLGTGSTSNRKSP 347



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 149 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 208

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 209 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 267

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 325

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 326 YSFGLGGNGQLGTGSTSNRKSPFTVK 351


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 60
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 119
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNS-HADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 274 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 563



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSI 638



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 293 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS  V + R+  
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VSHWVPK-RVNF 408

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV 459


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 143/311 (45%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q + G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q  C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V + + G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   +Q++  E     +   G+V+  G  +    G       +  P L+E+L+ V  K+
Sbjct: 3645 SALRPIQLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAES-VTVPSLLESLQHVFVKK 3703

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  G V++ G    G+LGHG+ L    P+ I  L     VV +A G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRG-KDVVDVACGG 3762

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD    A+
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAI 3822

Query: 226  --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
              +  G V++WG G  G LG G      +P  + SL     ++V    + +  L + GSV
Sbjct: 3823 TDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            Y +G   +  LG    GV + V RP+ + +L+   V  ISTG  H VV TD+G ++ +GD
Sbjct: 3883 YTWGKGDYHRLG---HGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGD 3939

Query: 344  NERAQLGHDTLRGCLEP 360
            N+  QLG  T  G  +P
Sbjct: 3940 NDEGQLGDGTTTGIQKP 3956



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 156/338 (46%), Gaps = 15/338 (4%)

Query: 32   GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNR 89
            GP+ ++      +++  +   + V+        V QSG+ + CG+  N     GH   +R
Sbjct: 2713 GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGH---SR 2769

Query: 90   PIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
             +  P  + AL     ++V   +G      LT  G V + G    G+LGHGD     TP+
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 148  SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
             I  L     V  +AAG ++  AVT +G +Y++G G    LGHG+   +L P+ +++   
Sbjct: 2830 CIEALNGF-RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESL-- 2886

Query: 208  KGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             G  VV+VS G  D   +AL   G VY+WG G  G LG G     + P  +  L      
Sbjct: 2887 VGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVC 2946

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             V    + +  L   G VY +G   +  LG    G    V  P +++ LR   V  +S G
Sbjct: 2947 HVECGAQFSVALTCNGHVYTWGKGDYFRLG---HGSDQHVRWPTLVEGLRGKKVIGVSVG 3003

Query: 326  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              H + VTD G++F +GDN+  Q G+ ++     PT +
Sbjct: 3004 ALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLV 3041



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 13/283 (4%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH +   P  RPR++E+L+G     V  G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGN-KLPCDRPRIIESLRGKDVVDVACGG 3762

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYML 169
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L  +G  V+ +A  +G +   
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEAL--LGYRVMDVACGSGDAQTC 3820

Query: 170  AVTGN--GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            A+T    G V+S+G G    LG G       P  I++    G+ +++V  G +  VAL +
Sbjct: 3821 AITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL--SGLGIIKVECGSQFSVALSN 3878

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            +G VYTWGKG    LGHG +     P+ + +L+    + +        V  D G VY +G
Sbjct: 3879 NGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWG 3938

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                G LG    G +  + +PR++ +L+   ++++S G  HTV
Sbjct: 3939 DNDEGQLG---DGTTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 26/334 (7%)

Query: 11   LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ---VSASENHA 62
            L+  +   ++CG    G LG G           +N P      + HVV+   V +   HA
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRN-------VNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
              +   G+VF+ G+      GH D    +  PR +EAL G   + V AG N +  +T  G
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTS-LDTPRCIEALNGFRVRDVAAGSNHSAAVTSSG 2856

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYS 179
             ++T G   +G+LGHGD L + TPK +  L  VG  VVQ++ G   +  LA+   G+VYS
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRVESL--VGQRVVQVSCGSRDAQTLALVEGGLVYS 2914

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LG G       P  +      G+ V  V  G +  VAL  +G+VYTWGKG  
Sbjct: 2915 WGDGDFGKLGRGGSEGCSSPCLVDKL--SGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
              LGHG +     P  +  L+    + V         + D G V+ +G    G  G    
Sbjct: 2973 FRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSI 3032

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             V+    RP ++  +    +++++ G  H+V  T
Sbjct: 3033 TVNR---RPTLVQGIDGIKITRVACGSSHSVAWT 3063



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  G N  GQLG  +      P     L  +  + Q+A G   + A+T +G VY+ G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPI-QLAGGEQTLFAITSDGRVYATG 3672

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+G  G 
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+++    P  + SL+    V V      +  +   G +Y +G   +G LG    G 
Sbjct: 3733 LGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLG---HGD 3789

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR--GRLFGFGDNERAQLGHDTLRGC 357
            SD  L+P+++++L  + V  ++  +G   T  +TD   G ++ +GD +  +LG     GC
Sbjct: 3790 SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGC 3849

Query: 358  LEPTEI 363
              PT+I
Sbjct: 3850 KIPTKI 3855



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 126/291 (43%), Gaps = 21/291 (7%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G    G LGHG     C     I       VV V+    H
Sbjct: 3706 VNSGGKHCLALSSEGEVYSWGEGEDGKLGHG-NKLPCDRPRIIESLRGKDVVDVACGGAH 3764

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            +A +   G+++T G       GH D++  + +P+LVEAL G     V  G        I 
Sbjct: 3765 SAAITALGELYTWGKGRYGRLGHGDSDDQL-KPKLVEALLGYRVMDVACGSGDAQTCAIT 3823

Query: 122  ----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
                G V + G   +G+LG G +     P  I  L  +G ++++  G  + +A++ NG V
Sbjct: 3824 DEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLG-IIKVECGSQFSVALSNNGSV 3882

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y++G G    LGHG      +P+ + T   +G  V+ +S G  H V     G VYTWG  
Sbjct: 3883 YTWGKGDYHRLGHGVDEHVRRPKKVMTL--QGKKVISISTGALHCVVCTDQGEVYTWGDN 3940

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
              G LG G       P  +++L++           K    V  GS +   W
Sbjct: 3941 DEGQLGDGTTTGIQKPRLVAALQN-----------KKINRVSCGSAHTVAW 3980



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L ++  VFS G    G LGHG + T   +   I   +   V  V+A  NH+A V
Sbjct: 2794 GRHALALTADGRVFSWGEGDDGKLGHG-DVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 123
              SG+++T G       GH D N     P+ VE+L G    QV+ G      L +   G 
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD-NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGL 2911

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LG G +    +P  +  L  +G V  +  G  + +A+T NG VY++G G
Sbjct: 2912 VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYTWGKG 2970

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG       P  ++  R  G  V+ VS G  H +A+  +G V+ WG    G  G
Sbjct: 2971 DYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG 3028

Query: 244  HG 245
            +G
Sbjct: 3029 NG 3030



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 6/239 (2%)

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V+  G N   QLG         P+++     +  +  +A G   +  VT +G  Y+ G G
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPI-SVAGGSKSLFLVTQSGKAYACGEG 2758

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            SN  LG G   +   P  I    +  +  V V +G  H +AL + G V++WG+G  G LG
Sbjct: 2759 SNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLG 2818

Query: 244  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            HGD      P  + +L       V A    +  +  +G +Y +G   +G LG  D     
Sbjct: 2819 HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ- 2877

Query: 304  KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              L P+ ++SL    V Q+S G     T+ + + G ++ +GD +  +LG     GC  P
Sbjct: 2878 --LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP 2934


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 19/364 (5%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + ++ +V++ G +  G LG G   T      ++   S   VV  SA  
Sbjct: 150 VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSG--VVAASAGW 207

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+   L  G V+  G+N+S   G+  +      P  V+ L+GV    V AG  ++  L 
Sbjct: 208 AHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALR 265

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   GSN HGQ G G T+   +   +  L     VV +AAG ++ LAV  +G +++
Sbjct: 266 SDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS---GVVAMAAGSAHSLAVRSDGTLWA 322

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+     LG G + D   P+ +Q   R    VV V+AGD H +AL + G V+TWG  + 
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR----VVAVAAGDGHSIALCADGTVWTWGYNHD 378

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G L HG   D   P PL   +    V V A    +  ++  GSV+ +G+   G LG    
Sbjct: 379 GQLAHGSTNDS--PVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSL 436

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             S + +R + L       V+ +S GL H++     G ++ +G N   QLG  T    L 
Sbjct: 437 SSSAEPVRVQGLSG-----VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV 491

Query: 360 PTEI 363
           P  +
Sbjct: 492 PVRV 495



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 169/412 (41%), Gaps = 64/412 (15%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+L +  + +V++ G +  G LG G   +       +  P  + VV VSA +
Sbjct: 49  VAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHS---EPVRVPGLSGVVAVSAGD 105

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  +   G V+  GDN+S   G     +    P  +E L  V    V AG N +  + 
Sbjct: 106 NHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVA--VAAGGNHSLAVR 163

Query: 120 IRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V   G N  GQLG G+ L  R  PK +  L     VV  +AG ++ +    +G V+
Sbjct: 164 ADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS---GVVAASAGWAHSMVALSDGSVW 220

Query: 179 SFGS------GSNFCLGHGEQHDELQP-RAIQTFRRKGIH-------------------- 211
           ++G+      G+   +G+G   +++Q  R +      G++                    
Sbjct: 221 AWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQ 280

Query: 212 --------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
                               VV ++AG  H +A+ S G ++ WG  Y G LG G   D  
Sbjct: 281 RGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHD 340

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            P+ +  L     V V A    +  L   G+V+ +G+   G L       S   L  R L
Sbjct: 341 TPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVREL 398

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             + A     ++ G  H++ V   G ++ +G N + QLG  +L    EP  +
Sbjct: 399 SGVVA-----VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRV 445



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 39/361 (10%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           + +  G  H+L + S+ ++++ G++  G LG G       P+  Q +S           V
Sbjct: 302 VAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLS----------RV 351

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAG 111
           V V+A + H+  +   G V+T G N      H  TN  P+  P  V  L GV    V AG
Sbjct: 352 VAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPV--PLHVRELSGVVA--VAAG 407

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +  +   G V   G N  GQLG G       P  +  L     V  ++AG ++ LA 
Sbjct: 408 ALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLS---GVAAVSAGLNHSLAR 464

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGY 230
             +G V+++G  S   LG G   + L P      R +G+  V  +SAG  H +A  S G 
Sbjct: 465 GTDGGVWAWGGNSFGQLGEGTTSNALVP-----VRVRGLSGVETISAGFNHSLARASDGG 519

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           ++ WG  Y G LG G   + ++P  +  L    A  V A    +  +   GSV+ +G   
Sbjct: 520 LWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAA--VFAGLNHSLAVRTDGSVWAWGINS 577

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG    G ++    P  +  L    +  ++ G  H++ V   G ++ +G+N   QLG
Sbjct: 578 FGQLG---EGTTNTSFAPVRVQGLSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLG 632

Query: 351 H 351
           H
Sbjct: 633 H 633



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 159/369 (43%), Gaps = 32/369 (8%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L +  + +V++ G +  G LG G   +       +     + VV VSA E H
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHS---EPVRVRGLSGVVAVSAGEGH 57

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + + G V+  GDN+    G   T+     P  V  L GV    V+AG N +  L   
Sbjct: 58  SLALHRDGTVWAWGDNALGQLGD-GTSDSHSEPVRVPGLSGVVA--VSAGDNHSLALRSD 114

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA---PLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G V   G N   QLG       P  +S +    LE++  VV +AAG ++ LAV  +G V+
Sbjct: 115 GSVWAWGDNNSDQLG-----GAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGTVW 169

Query: 179 SFGSGSNFC--LGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           ++  G NF   LG G        P+ +Q        VV  SAG  H +   S G V+ WG
Sbjct: 170 AW--GDNFAGQLGDGNILTTRWLPKQVQGLSG----VVAASAGWAHSMVALSDGSVWAWG 223

Query: 236 KGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
               G LG+G  +    LPE +  L+  +A  V A    +  L   G+++ +G    G  
Sbjct: 224 NNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSNDHGQR 281

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G          +R R L  + A     ++ G  H++ V   G L+ +G N   QLG  T 
Sbjct: 282 GDGSTVYLSSSVRVRWLSGVVA-----MAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTR 336

Query: 355 RGCLEPTEI 363
           +    P  +
Sbjct: 337 KDHDTPKRV 345



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 16/260 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L ++S+ SV++ G +  G LG G  ++   S   +     + V  VSA  
Sbjct: 402 VAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS---SAEPVRVQGLSGVAAVSAGL 458

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+      G V+  G NS    G   T+  +  P  V  L GV  + ++AG N +    
Sbjct: 459 NHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGLSGV--ETISAGFNHSLARA 515

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   G N  GQLG G T +   P  +  L  V +V    AG ++ LAV  +G V++
Sbjct: 516 SDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVF---AGLNHSLAVRTDGSVWA 572

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S   LG G  +    P  +Q     G+  V  +AG  H +++ S G +++WG  + 
Sbjct: 573 WGINSFGQLGEGTTNTSFAPVRVQGL--SGMETV--AAGSLHSLSVGSDGSMWSWGNNHH 628

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LGHG  +    P P+ SL
Sbjct: 629 GQLGHG--LPGRSPTPVRSL 646


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   V+S G    G LG             I   S   +VQV+    H
Sbjct: 89  VSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT+ 
Sbjct: 149 SLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G   ++  P
Sbjct: 326 QLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 150/303 (49%), Gaps = 12/303 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VVQ++    H   + +   V++ G       GH D N   + P LV AL G   KQVT G
Sbjct: 41  VVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHAD-NHWKYVPHLVSALTGKSIKQVTCG 99

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 170
              T  ++  G + T G   +G+LGHG+ +  P P  +     +G  V QIA G  +  A
Sbjct: 100 SYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAA 157

Query: 171 VTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +   G VY +G   N   G GE  +H  L P+ ++    KG+ + +++A   H  A+   
Sbjct: 158 LLAGGEVYCWGDRENGVCGIGEAAEHQYL-PKKLEAL--KGVKITQIAACGFHTAAITQD 214

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +++WG+G  G LG G+E ++  P  +  L+     QV      +  + + G V  FG 
Sbjct: 215 GALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGG 274

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              G LG  D+  +++ + P ++ +L    + Q++ G  HTV +++ G++F FG+ +  +
Sbjct: 275 GEHGQLGHGDK--TNRTV-PCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGK 331

Query: 349 LGH 351
           LGH
Sbjct: 332 LGH 334



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 5/277 (1%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+T G YHT  IS++ ++++ G  + G LGHG E        R+       V Q++    
Sbjct: 95  QVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAP-CRVEAFIGREVEQIACGSR 153

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +L  G+V+  GD  +  CG  +     + P+ +EALKGV   Q+ A    T  +T 
Sbjct: 154 HTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQ 213

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G + + G    G+LG G+  ++ TP  +  L+ V  V Q+A G  +   VT +G V +F
Sbjct: 214 DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGV-RVKQVACGGFHSACVTEDGDVLTF 272

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G +  LGHG++ +   P  ++     GI  V+V+ G  H V L   G V+T+G G  G
Sbjct: 273 GGGEHGQLGHGDKTNRTVPCLVKALEGAGI--VQVTCGWSHTVTLSEDGKVFTFGNGDHG 330

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
            LGHG      LP+ + SL +    +V +    T  L
Sbjct: 331 KLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 19/358 (5%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  HT++++ +  V+S G    G LGH     + V    ++  +   + QV+   
Sbjct: 42  VQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHL-VSALTGKSIKQVTCGS 100

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H A +  +G ++T G       GH  +   P   P  VEA  G   +Q+  G   T  L
Sbjct: 101 YHTAAISDTGALWTWGGGMYGKLGHGNEVGHPA--PCRVEAFIGREVEQIACGSRHTAAL 158

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
              G V+  G   +G  G G+  + +  PK +  L+ V  + QIAA   +  A+T +G +
Sbjct: 159 LAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV-KITQIAACGFHTAAITQDGAL 217

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +S+G G    LG G + +++ P  ++    +G+ V +V+ G  H   +   G V T+G G
Sbjct: 218 WSWGEGKFGRLGQGNEKNQVTPCCVEGL--QGVRVKQVACGGFHSACVTEDGDVLTFGGG 275

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LGHGD+ ++T+P  + +L+    VQV      T  L + G V+ FG    G LG  
Sbjct: 276 EHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLG-- 333

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             G + K   P++++SL    V+++++   HTV +          + E+A +  D L+
Sbjct: 334 -HGANAKSALPKLVESLANMKVAKVASYNEHTVALC-------HAEQEQAVMSFDFLK 383



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 8/282 (2%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +++ G      CG+  TN     P  VE LK +   Q+  G   T  LT    V + G  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             G+LGH D   +  P  ++ L    S+ Q+  G  +  A++  G ++++G G    LGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTG-KSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 249
           G +     P  ++ F   G  V +++ G  H  AL + G VY WG    G  G G+  + 
Sbjct: 126 GNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEH 183

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           + LP+ L +LK     Q+ A    T  +   G+++ +G   FG LG   +G     + P 
Sbjct: 184 QYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG---QGNEKNQVTPC 240

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            ++ L+   V Q++ G +H+  VT+ G +  FG  E  QLGH
Sbjct: 241 CVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH 282



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 5/237 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           +++ G    GQ G+G T D+  P  +  L+ + +VVQIA G  + + +T +  V+S+G G
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHL-TVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +  LGH + H +  P  +     K I   +V+ G  H  A+  +G ++TWG G  G LG
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGKSIK--QVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG+E+    P  + +       Q+    R T  L+  G VY +G    G  G  +   ++
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE--AAE 182

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
               P+ L++L+   ++QI+   +HT  +T  G L+ +G+ +  +LG    +  + P
Sbjct: 183 HQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTP 239



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 5/177 (2%)

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           + ++YS+G G +   G+G  +D+  P  ++  +   + VV+++ G  H V L     V++
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKH--LTVVQIACGSGHTVVLTEDKDVWS 62

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG+G  G LGH D   K +P  +S+L      QV      T  + DTG+++ +G   +G 
Sbjct: 63  WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG    G       P  +++     V QI+ G  HT  +   G ++ +GD E    G
Sbjct: 123 LG---HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCG 176



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +Y+WG+G  G  G+G   D+ +P P+  LK    VQ+      T VL +   V+ +G   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG  D   +     P ++ +L    + Q++ G YHT  ++D G L+ +G     +LG
Sbjct: 68  DGRLGHAD---NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 351 HDTLRGCLEP--TEIFI-QEMEE 370
           H    G   P   E FI +E+E+
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQ 147


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           +  G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 159/333 (47%), Gaps = 23/333 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF  GD S    GH   +  +  P+LVEAL     + V  G
Sbjct: 309 VHHIACGNRHAALVTKQGEVFCWGDESGGRLGH-GVDVDVAHPKLVEALATTNTEFVACG 367

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              +  +T+ G + T G  TH  G LGHG+ +   TPK +  PLE +  V  +A G  + 
Sbjct: 368 EYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGI-RVSSVACGVWHT 426

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     P+ +++   KG+  VRV+ G  H  A+   
Sbjct: 427 ALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESL--KGLKTVRVACGVWHTAAVVEV 484

Query: 226 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    SSG ++TWG G  G LGHGD+  K +P  +++L  +   QV      T  L
Sbjct: 485 MVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVAL 544

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G V+  G   +G LG      +D  L   +   L    V +I+ G YH  V+T +  
Sbjct: 545 TINGRVFTMGSSLYGQLG---DVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTE 601

Query: 338 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           ++ +G     +LGH  +     PT   ++ ++E
Sbjct: 602 VYTWGKGANGRLGHGDVMDRNTPT--LVEALKE 632



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 129/277 (46%), Gaps = 28/277 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S  +F+ G      G+LGHG + +      R+  P     V  V+  
Sbjct: 364 VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP-KRVGGPLEGIRVSSVACG 422

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +V  G+  T  +
Sbjct: 423 VWHTALVTSAGQLFTFGDGTFGVLGHGD-KRSVALPKEVESLKGLKTVRVACGVWHTAAV 481

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G    G+LGHGD   +  P  +A L +  +  Q+A G + 
Sbjct: 482 VEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDY-NFKQVACGHTL 540

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDEL----QPRAIQTFRRKGIHVVRVSAGDEHVV 223
            +A+T NG V++ GS     LG      +L    + R  + F      V  ++ G  HV 
Sbjct: 541 TVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAF------VEEIACGAYHVA 594

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            L +   VYTWGKG  G LGHGD +D+  P  + +LK
Sbjct: 595 VLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALK 631



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 24/294 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    +  G      +T +G V   G  + G+LGHG  +D   PK +  L 
Sbjct: 298 PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALA 357

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 211
              +   +A G  +  AVT +G ++++G G++    LGHG       P+ +     +GI 
Sbjct: 358 TTNTEF-VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIR 415

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  V+ G  H   + S+G ++T+G G  G LGHGD+    LP+ + SLK    V+V    
Sbjct: 416 VSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGV 475

Query: 272 RKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             T  +V+           +G ++ +G    G LG  D+   ++ L P  + +L  ++  
Sbjct: 476 WHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDK---EQKLVPTCVAALVDYNFK 532

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLG----HDTLRGCLEPT--EIFIQEM 368
           Q++ G   TV +T  GR+F  G +   QLG       L G +E    E F++E+
Sbjct: 533 QVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEI 586



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G +HT L++++  +F+ G    GVLGHG + +  +    +        V+V+    H
Sbjct: 419 VACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALP-KEVESLKGLKTVRVACGVWH 477

Query: 62  AAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            A V++           SG++FT GD      GH D  + +  P  V AL     KQV  
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV-PTCVAALVDYNFKQVAC 536

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   T  LTI G V T GS+ +GQLG     D   P  +        V +IA G  ++  
Sbjct: 537 GHTLTVALTINGRVFTMGSSLYGQLGDVRA-DGKLPGLVEGRLWEAFVEEIACGAYHVAV 595

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           +T    VY++G G+N  LGHG+  D   P  ++  + K +  V   +G
Sbjct: 596 LTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSG 643



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 4/174 (2%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G + D L P+A+++     +H   ++ G+ H   +   G V+ WG    G LGHG ++D 
Sbjct: 290 GIKTDSLLPKALESAVVLDVH--HIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDV 347

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 309
             P+ + +L +     V   +  +  +  +G ++ +G  G  S G    G       P R
Sbjct: 348 AHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWG-DGTHSYGLLGHGNDISHWTPKR 406

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L    VS ++ G++HT +VT  G+LF FGD     LGH   R    P E+
Sbjct: 407 VGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEV 460



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           + G   G  ++   S+G  D G+    L P+ L+S     V  I+ G  H  +VT +G +
Sbjct: 269 EEGDALGDVFLWGESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEV 328

Query: 339 FGFGDNERAQLGH 351
           F +GD    +LGH
Sbjct: 329 FCWGDESGGRLGH 341


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            ++  G++  G LG G  E  Q ++ ++I +   + V QV+    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            N     GH     P  RP  +  L+     Q+  G   +  LT  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 196 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
             Q   P  + T    GI    ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LSQCNYPMRLTTLL--GIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 253 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
           P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G S   + PR+
Sbjct: 237 PTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGAYGQLG---HGFSSNEMLPRM 291

Query: 311 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 350
           +  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 292 VMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 15/301 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---EDYVITQIACGSR 96

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQV + GDN     GH      I  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G +++ GSN +GQLG     +      P  +  L  + +   IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAA-IACGGNHTFLISKSSAV 215

Query: 178 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 271

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG    G L
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331

Query: 295 G 295
           G
Sbjct: 332 G 332



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 10/245 (4%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  G+ +HGQLG G   D    TP  I P +   +V Q+A G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQI-PWKPDSAVNQVACGHRHTLFLTASGKVYAC 60

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 240 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH  + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKS 175

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                +   P  L +L     + I+ G  HT +++    +FG+G N   QLG +      
Sbjct: 176 PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 359 EPTEI 363
            PT++
Sbjct: 236 YPTQL 240



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 3057 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3114

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3115 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3173

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3231

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3232 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3291

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3292 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3349 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3374



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3086 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3145

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3146 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3203

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3204 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3260

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3261 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3306



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4168

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4227

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4285

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4345

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4155

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4156 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4274

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4275 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4332 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4360



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 570

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 688

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 689 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 748

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 749 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805

Query: 345 ERAQLGHDTLRGCL-EPTEI 363
           ++ Q   DTLR    EPT +
Sbjct: 806 DQCQ-HFDTLRVTKPEPTAL 824



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4075

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4135

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4195

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4196 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4252

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4253 CKVPMKI 4259



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4112 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4170

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4171 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4229

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4230 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4288

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4289 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4346

Query: 240  GALGHG 245
            G LG G
Sbjct: 4347 GQLGDG 4352



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3181

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3357

Query: 244  HG 245
            +G
Sbjct: 3358 NG 3359



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 626

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 627 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 685

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 686 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 744

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 745 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 802

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 803 GSN--DQCQHFDTLRVTKPEP 821



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3229

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3230 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3347

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3390



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4278

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4279 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4337

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4338 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4383



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4010 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4069

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4070 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4153



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3084

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3085 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3142 DDGKLGHFSRMNCDKPRLI 3160


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4104

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4163

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 240  GALGHG 245
            G LG G
Sbjct: 4281 GQLGDG 4286



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKTAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYSCGEATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3050

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3169 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3251



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3081 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3137

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4045

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4046 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4104

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4105 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4162

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4163 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4223 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4033 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4151

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4152 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4209 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4073 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4130 CKVPMKI 4136



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3989 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4047

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4048 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4106

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4107 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4165

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4166 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4223

Query: 240  GALGHG 245
            G LG G
Sbjct: 4224 GQLGDG 4229



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3058

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234

Query: 244  HG 245
            +G
Sbjct: 3235 NG 3236



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 503

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 562

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 621

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 680 GSN--DQCQHFDTLRVTKPEP 698



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3224

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4155

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4156 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4260



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3887 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3947 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4030



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2961

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2962 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3019 DDGKLGHFSRMNCDKPRLI 3037


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 6/269 (2%)

Query: 94  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P L+E+++ V  K+V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L  V  +V IA G  +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 63  LLGV-EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI 121

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            V   +GD   + +     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 122 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGS 181

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
           + +  L  +G+VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V 
Sbjct: 182 QFSVALTRSGAVYTWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 238

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D+G +F +GDN+  QLG  T      P
Sbjct: 239 CSDKGEVFTWGDNDEGQLGDGTTSALHRP 267



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
           V VS+   H   +   G V++ G+      GH   N+  + RP+L+E L GV    +  G
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACG 74

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
            + +  +T  G ++T G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L 
Sbjct: 75  GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLC 134

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 135 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGA 192

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +++L+    + +           D G V+ +G   
Sbjct: 193 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 252

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 253 EGQLG---DGTTSALHRPRLVHALQGKKITRVACGSAHTL 289



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 13/245 (5%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
           G++   L S   V+S G    G LGHG +    VS+ R   I       +V ++   +H+
Sbjct: 23  GKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSYDRPKLIEDLLGVEIVDIACGGHHS 78

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TI 120
           A +  +G ++T G       GH D++  + RP++VEAL+      V  G      L  T 
Sbjct: 79  AAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTLCVTD 137

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY++
Sbjct: 138 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VVKVECGSQFSVALTRSGAVYTW 196

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+TWG    G
Sbjct: 197 GKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVFTWGDNDEG 254

Query: 241 ALGHG 245
            LG G
Sbjct: 255 QLGDG 259


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 25/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
            Q++ G   TV +T+ G ++  G     QLG+    G L      + ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 26/349 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
             I  G  H  L++    VFS G    G LGHG + +       I+  S  ++  V+  E
Sbjct: 311 QNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACGE 369

Query: 60  NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  SG ++T GD   NS      +D +  + + R+   L+G+    ++ G   T 
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSISCGPWHTA 428

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 172
            +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV     
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHTAAVVEVII 487

Query: 173 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
                    +G ++++G G    LGHG++   L P  +        +  +V+ G    VA
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVACGHSLTVA 545

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSV 283
           L +SG++YT G    G LG+  + D  LP  +   L      ++        VL     V
Sbjct: 546 LTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEV 604

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           Y +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 605 YTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 255 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 121 RGHV 124
              V
Sbjct: 653 HKWV 656


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2996 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3053

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3054 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3112

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3170

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3171 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3230

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3231 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3287

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3288 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3313



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3025 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3084

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3085 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3142

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3143 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3199

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3200 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3245



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4107

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4108 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4166

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4167 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4224

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4225 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4284

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4285 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4094

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4095 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4213

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4214 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4271 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4299



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 507

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 625

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 626 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 685

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 686 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 743 DQCQ-HFDTLR 752



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4014

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4074

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4134

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4135 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4191

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4192 CKVPMKI 4198



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4051 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4109

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4110 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4168

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4169 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4227

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4228 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4285

Query: 240  GALGHG 245
            G LG G
Sbjct: 4286 GQLGDG 4291



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3120

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3296

Query: 244  HG 245
            +G
Sbjct: 3297 NG 3298



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 626

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +G VY
Sbjct: 627 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKDGQVY 685

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 686 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 742

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 743 -DQCQHFDTLRVTKPEP 758



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3168

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3169 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3227

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3228 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3286

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3329



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4217

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4218 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4276

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4277 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4322



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3949 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4008

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4009 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4092



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3023

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3024 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3081 DDGKLGHFSRMNCDKPRLI 3099


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPT 361
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 25/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 211
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
            Q++ G   TV +T+ G ++  G     QLG+    G L      + ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 26/349 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
             I  G  H  L++    VFS G    G LGHG + +       I+  S  ++  V+  E
Sbjct: 311 QNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACGE 369

Query: 60  NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  SG ++T GD   NS      +D +  + + R+   L+G+    ++ G   T 
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSISCGPWHTA 428

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 172
            +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV     
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHTAAVVEVII 487

Query: 173 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
                    +G ++++G G    LGHG++   L P  +        +  +V+ G    VA
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVACGHSLTVA 545

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSV 283
           L +SG++YT G    G LG+  + D  LP  +   L      ++        VL     V
Sbjct: 546 LTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEV 604

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           Y +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 605 YTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 255 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 311
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 121 RGHV 124
              V
Sbjct: 653 HKWV 656


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL +++   V+S G    G LG             I   S   +VQV+    H
Sbjct: 89  VSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYH 148

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT+ 
Sbjct: 149 SLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 208

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 240
           +G    LGH     E+ PR +  F   G  V +V+ G +H  A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325

Query: 241 ALGHGDEIDKTLP 253
            LG G   ++  P
Sbjct: 326 QLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 162/352 (46%), Gaps = 18/352 (5%)

Query: 19  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
           +S G +  G L H     + +  T I+F     ++ V+      AF+ ++G VFTCG N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLP-TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 79  SFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           S  CG   T+R +   RLV AL  + +   +   G      ++  G ++T G N+ GQLG
Sbjct: 73  SGQCGIGSTSR-VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           HG T    TP  I  L     VV++A    + + +T  G +Y+FG      LG  +  D 
Sbjct: 132 HGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----KT 251
             P  +  F  +   V+ V+ G  H V   ++G V  +GK   G LG G  +D       
Sbjct: 191 HVPVPLTYFNSRP--VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSL 248

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           L  PL SL   +   +      T  L + GSVY FG   +G LG    G    +  P ++
Sbjct: 249 LAAPLDSL---VVPSLACGYYHTIALAEHGSVYSFGRNDYGQLG---HGHRHHLSEPTLI 302

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +L   H  Q++ G YHT+V+++ G+++ FG N   QLG   L  C  P  I
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQII 354



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 18/330 (5%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQVSASENHAAFV 65
            L     VF+CG +  G  G G  +T  V   R+  P+      AH+   +  E H   +
Sbjct: 58  FLFETGDVFTCGYNDSGQCGIG--STSRVQSLRL-VPALVTEDIAHIRSANGCE-HLTAI 113

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
            +SG ++T G NS    GH  TN PI  P  ++ L      +V      T  +T+ G ++
Sbjct: 114 SRSGALYTFGFNSRGQLGHGSTN-PITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLY 172

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSG 183
             G N  GQLG  D +DR  P    PL    S  V+ +A G  + +    NG V +FG  
Sbjct: 173 AFGRNDLGQLGIDDGMDRHVP---VPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKN 229

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +  LG G   D     ++       + V  ++ G  H +AL   G VY++G+   G LG
Sbjct: 230 DHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLG 289

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG     + P  + +L    AVQV      T VL + G VY FG    G LG    G   
Sbjct: 290 HGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGL---GNLI 346

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               P+I+ SLR   V ++++G YH++ +T
Sbjct: 347 DCTSPQIIASLRDKFVVKVASGFYHSICLT 376


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGTRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV    R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGS 4208

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLGL---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLRGCL-EPTEI 363
           ++ Q   DTLR    EPT +
Sbjct: 738 DQCQ-HFDTLRVTKPEPTAL 756



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4104

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4163

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 240  GALGHG 245
            G LG G
Sbjct: 4281 GQLGDG 4286



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 357  CLEPTEI 363
               P +I
Sbjct: 4187 SKVPMKI 4193



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LG G +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGLGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G      V   +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPM-KIDSLTGLGVVKVECGSQFSV 4212

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2976 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3094

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3095 SHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3152

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3153 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3212

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3213 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3269

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3270 NDHGQQGNGTTTVNRKPT--LVQGLE 3293



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3004

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3005 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3064

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3065 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3122

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3123 ATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3179

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3180 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3227



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4016 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4075

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4076 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGS 4194

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4195 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4252 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4280



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4088

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4089 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4147

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T + +V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVTKVECGSQFSVALTKSGA 4205

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4265

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4266 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 24/323 (7%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 435 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKIVK 483

Query: 108 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 162
           + A  +   +L +   G V + G    G+LGHGD      P  IA    ++ G  VV IA
Sbjct: 484 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIA 543

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 220
            G +Y   +T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 601

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 661

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G VY +G      LG    G  + V  P++LD+L+   V  ++ G  H + +TD G +  
Sbjct: 662 GQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 718

Query: 341 FGDNERAQLGHDTLRGCLEPTEI 363
           +G N++ Q   DTL    +P  +
Sbjct: 719 WGSNDKLQ-HFDTLSNKKQPKAL 740



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 16/263 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFN--GKQAGKHVVHIACGST 547

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  ++     P LV ALKG+    V  G      L +
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGH-GSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAV 606

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 665

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 722

Query: 239 CGALGHGDEI-DKTLPEPLSSLK 260
              L H D + +K  P+ L  LK
Sbjct: 723 -DKLQHFDTLSNKKQPKALPGLK 744



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4032 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 4090

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T  LT
Sbjct: 4091 SACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTLCLT 4149

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G VY+
Sbjct: 4150 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTKVECGSQFSVALTKSGAVYT 4208

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4266

Query: 240  GALGHG 245
            G LG G
Sbjct: 4267 GQLGDG 4272



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3995

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3996 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4055

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4056 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4112

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4113 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4172

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4173 CKIPMKI 4179



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGD-NATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3276

Query: 244  HG 245
            +G
Sbjct: 3277 NG 3278



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3916 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3963

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3964 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLE 4020

Query: 313  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P  I
Sbjct: 4021 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 4073



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4257

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4258 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4303


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 583 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 640

Query: 106 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 641 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 699

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 757

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 758 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 817

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 818 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEME 369
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 875 GDNDHGQQGNGTTTVNRKPT--LVQGLE 900



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 553 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 611

Query: 130 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 612 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 671

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 672 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729

Query: 248 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
             +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 730 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 786

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 787 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 832



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1693

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 1694 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 1752

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1753 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1810

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1811 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1870

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1871 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 1680

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1681 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1799

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1800 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1857 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1885



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1600

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 1660

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1720

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1721 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1777

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 1778 CKVPMKI 1784



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 119/248 (47%), Gaps = 8/248 (3%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A  
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGG 1693

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGF 117
             H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  
Sbjct: 1694 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLC 1752

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G V
Sbjct: 1753 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAV 1811

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG  
Sbjct: 1812 YTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDN 1869

Query: 238  YCGALGHG 245
              G LG G
Sbjct: 1870 DEGQLGDG 1877



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHFSR-MNCDKPRLIEALKTKRIRDIACGSSHSAAL 707

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 708 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 825

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 826 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 883

Query: 244 HG 245
           +G
Sbjct: 884 NG 885



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 697 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 755

Query: 62  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 756 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 814

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 873

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 916



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1803

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1804 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1862

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1863 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1908



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 1535 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1594

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1595 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVI 1678



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 610

Query: 288 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
               G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 611 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667

Query: 345 ERAQLGHDTLRGCLEPTEI 363
           +  +LGH +   C +P  I
Sbjct: 668 DDGKLGHFSRMNCDKPRLI 686


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4104

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4163

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 240  GALGHG 245
            G LG G
Sbjct: 4281 GQLGDG 4286



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 152/315 (48%), Gaps = 21/315 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G+VFT G+ S    GH    + + +PR+VE+L       V  G   T  +TI
Sbjct: 292 HAALVTRQGEVFTWGEESGGRLGH-GVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTI 350

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  TH  G LGHG  +    PK ++ PLE +  V  +  GP +   VT  G +
Sbjct: 351 TGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGL-QVTSVTCGPWHTALVTSMGQL 409

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG++ +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 410 FTFGDGTFGALGHGDRENISYPKEVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSSSI 467

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V+  
Sbjct: 468 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSM 527

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    +D  +   + D L    V ++S G YH VV+T +  ++ +G    
Sbjct: 528 GSTVYGQLGNPS---ADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGAN 584

Query: 347 AQLGHDTLRGCLEPT 361
            +LGH  +     PT
Sbjct: 585 GRLGHGDVEDRKTPT 599



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   R++ P     V  V+  
Sbjct: 338 VACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP-KRVSGPLEGLQVTSVTCG 396

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V   GQ+FT GD +    GH D    I  P+ VE+L G+    V  G+  T  +
Sbjct: 397 PWHTALVTSMGQLFTFGDGTFGALGHGDREN-ISYPKEVESLSGLRTIAVACGVWHTAAV 455

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +     ++A G S 
Sbjct: 456 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-DFHKVACGHSI 514

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V+S GS     LG+     ++ P  ++  +  G  V  VS G  HVV L S
Sbjct: 515 TVGLTTSGQVFSMGSTVYGQLGNPSADGKI-PCLVED-KLFGESVEEVSCGAYHVVVLTS 572

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 614



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 25/310 (8%)

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           NSS+     D    +  PR +E+   +    +  G+     +T +G V T G  + G+LG
Sbjct: 259 NSSYVTLRTD----VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLG 314

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 194
           HG   D   P+ +  L    S+  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 315 HGVVKDVIQPRMVESL-AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDV 373

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P+ + +   +G+ V  V+ G  H   + S G ++T+G G  GALGHGD  + + P+
Sbjct: 374 SHWIPKRV-SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPK 432

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSD 303
            + SL     + V      T  +V+            G ++ +G      LG  D+   +
Sbjct: 433 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---E 489

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEP 360
             L+P  + +L  +   +++ G   TV +T  G++F  G     QLG+ +  G   CL  
Sbjct: 490 PRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVE 549

Query: 361 TEIFIQEMEE 370
            ++F + +EE
Sbjct: 550 DKLFGESVEE 559



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 143/346 (41%), Gaps = 34/346 (9%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+  L+     VF+ G    G LGHG       P   + ++ + I F        V+  E
Sbjct: 291 RHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGF--------VACGE 342

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H   V  +G+++T GD  +++   GH          R+   L+G+    VT G   T  
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTAL 402

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHGD  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 403 VTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIA-VACGVWHTAAVVEVIVT 461

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   L+P  +        H  +V+ G    V L 
Sbjct: 462 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFH--KVACGHSITVGLT 519

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +SG V++ G    G LG+     K        L      +V        VL     VY +
Sbjct: 520 TSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTW 579

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G    G LG  D  V D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 580 GKGANGRLGHGD--VEDRKT-PTLVEALKDRHVKYIACGSNYTAAI 622


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 42   TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            T I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-- 2739

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 2800 LK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 2856

Query: 212  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+  
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIEC 2916

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H 
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2973

Query: 330  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
            + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2974 LAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3011



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 23/304 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQPLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L++L+   V  ++ G  H + +T+   +  +G+N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNN 737

Query: 345 ERAQ 348
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 45/245 (18%)

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  G  VV ++AG
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GTEVVDIAAG 3778

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFV 276
              H   + S+G +YTWGKG  G LGH D  D+  P+ + +L+ H  V V   +   +T  
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 3838

Query: 277  LVDTGSVYGFGWMGFGSLG----------------------------FPD---------- 298
            L D  +V+ +G   +G LG                            +P           
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYH 3898

Query: 299  ---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
                G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T  
Sbjct: 3899 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTN 3958

Query: 356  GCLEP 360
                P
Sbjct: 3959 AIQRP 3963



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 157 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 212
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 270
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             +   + D G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQPLAVTDNGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 331 VVTDRGRLFGFGDNERAQLGHDT 353
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3686

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3687 ATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3746

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 3747 DGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD 3806

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3807 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3863

Query: 357  CLEPTEI 363
            C  P ++
Sbjct: 3864 CKVPMKV 3870



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2818

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2936

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2937 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994

Query: 244  HG 245
            +G
Sbjct: 2995 NG 2996



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEAL--QGKKVIDVAAGSTHCLALTEDSEVHSWGNN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D + +T PEP
Sbjct: 738 -DQCQHFDTLHQTKPEP 753



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G     + AG 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGTEVVDIAAGG 3779

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3780 AHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 3838

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  +    R G    R S        LD    
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVG----RPSTPPPSWPRLDVG-- 3892

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
                GKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3893 ----GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDND 3948

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 3949 EGQLG---DGTTNAIQRPRLVAALQGRKVNRVACGSAHTLA 3986



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 149 IAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           I P++  G     V QIA      L ++ NG VY+    S          D L P+ +Q 
Sbjct: 441 IGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQG 490

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 265 ----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
               V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V 
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVI 607

Query: 321 QIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            ++  +G    + VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 608 DVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 16/246 (6%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     +       VV ++A   H
Sbjct: 3723 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAGGAH 3781

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 3782 SACVTSAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 3840

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  +     VG        PS+     G      
Sbjct: 3841 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGR--PSTPPPSWPRLDVG------ 3892

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
             G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3893 -GKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEEGEVYTWGDNDE 3949

Query: 240  GALGHG 245
            G LG G
Sbjct: 3950 GQLGDG 3955



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2866

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2867 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2925

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2926 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2984

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2985 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3027



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3607 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3654

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3655 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGVGGTESVSAPTLLE 3711

Query: 313  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P
Sbjct: 3712 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 3761


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 11/311 (3%)

Query: 47   PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            P+   +V+  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   
Sbjct: 2942 PNTGSLVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVV 2999

Query: 107  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAG 164
            QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
              + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAA 3117

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGS 282
            + SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G 
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G
Sbjct: 3178 VFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234

Query: 343  DNERAQLGHDT 353
              +  +LGH T
Sbjct: 3235 KGDYFRLGHGT 3245



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S    V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4049 VNSGGKHCLALSFEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAH 4107

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G +FT G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4108 SACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4166

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4225

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 240  GALGHG 245
            G LG G
Sbjct: 4284 GQLGDG 4289



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 244  HG 245
            +G
Sbjct: 3295 NG 3296



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAE 4072

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+Q+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEG 4063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 21/352 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++   YH+L L S+ +V++ G +  G LG   +T+     +    P  A   +++A   H
Sbjct: 455 LSASSYHSLALRSDGTVWAWGDNAYGQLG---DTSGGRRPSPAQVPGVAGATEIAAGTYH 511

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +   G V+T GDNS    G   T R    P +V  L  +    V AGL  +  L   
Sbjct: 512 SLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVI--THVAAGLFHSLALDSS 569

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N +GQLG G T  R  P  ++ L     +  I AGPSY +A+  +G V+++G
Sbjct: 570 GQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPA--GIQAIVAGPSYSVALGADGSVWTWG 627

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             SN  LG G       P  +         +V +S    H VALD++G ++ WG+   G 
Sbjct: 628 ENSNGQLGDGTTTARPVPARVSLP----ATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG+G  + ++ P  + S      VQ  A   R TF L   G+V+ +G    G LG     
Sbjct: 684 LGNGTLVSESTPRRVPSFAR---VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATS 740

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            S     P  + ++       +++G  H + V+  G +F FG N R QLG++
Sbjct: 741 AS-----PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYE 787



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 158/350 (45%), Gaps = 23/350 (6%)

Query: 12   LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
            L ++ +V++ G +  G LG+G  +   V    + +P     V +++   H   V   G V
Sbjct: 717  LRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYP---RTVPLASGAQHVLAVSSDGSV 773

Query: 72   FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G NS    G+  +      PR    L G  C + V AG  F+  L+  G V   G N
Sbjct: 774  FSFGSNSRGQLGYEGSATQT-SPRW---LTGPECIEAVAAGALFSLALSCDGGVWAWGDN 829

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
              GQLG G    R  P  +  L  V   V IAAG  + LAV  +G V+++G+  +  LG 
Sbjct: 830  GSGQLGDGAVTARTAPARVPGLAHV---VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886

Query: 191  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            G       P  ++      + VV V+ G  H +A+ + G V+ WG    G LG G    +
Sbjct: 887  GTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR 942

Query: 251  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
            TLP  +S+L    A+   A+   +  L + G V+ +G  G G LG    G +    RP  
Sbjct: 943  TLPVFVSTLSGVQAIASGAQH--SLALAEGGVVWAWGANGSGQLG---DGTTTSRTRPVQ 997

Query: 311  LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +  L    V  +  G   ++ +T  G+++ +G+N   QLG  TL    +P
Sbjct: 998  VSGLSG--VQGLVAGASFSLALTP-GKVWSWGNNSAGQLGDGTLNSRSQP 1044



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 170/404 (42%), Gaps = 66/404 (16%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           Y   L ++ SV++ G +  G LG G  T + V   R++ P  A +V +S   +H   +  
Sbjct: 613 YSVALGADGSVWTWGENSNGQLGDGTTTARPVP-ARVSLP--ATLVALSTRGSHTVALDT 669

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +G ++  G N S   G+  T      PR V +   V  +   +GL  T  L   G V   
Sbjct: 670 TGMLWAWGRNVSGQLGN-GTLVSESTPRRVPSFARV--QGFASGLRTTFALRADGTVWAW 726

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           G N+ GQLG+G T   P P     ++ VG    V +A+G  ++LAV+ +G V+SFGS S 
Sbjct: 727 GDNSLGQLGNGATSASPVP-----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSR 781

Query: 186 FCLGHGEQHDELQPRAI------------------------------------------- 202
             LG+     +  PR +                                           
Sbjct: 782 GQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841

Query: 203 --QTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
                R  G+ HVV ++AG +H +A+ + G V+ WG    G LG G    + +P  +  L
Sbjct: 842 RTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL 901

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
                V V      +  +   G+V+ +G  G G LG  D   + + L P  + +L    V
Sbjct: 902 VD--VVAVAGGSGHSLAVRADGTVWAWGANGSGQLG--DGTTTSRTL-PVFVSTLSG--V 954

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             I++G  H++ + + G ++ +G N   QLG  T      P ++
Sbjct: 955 QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQV 998



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 25/340 (7%)

Query: 19  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
              G++  G LG+G  + + +       PS      ++A ++H       G V+  GDN+
Sbjct: 371 LGWGANGSGQLGNGSSSVRALPG---RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNT 427

Query: 79  SFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
               G       + RP   RL   L  V  + ++A    +  L   G V   G N +GQL
Sbjct: 428 ---YGQLGDGTLVSRPAPVRLSSTLTSV--RALSASSYHSLALRSDGTVWAWGDNAYGQL 482

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G      RP+P   A +  V    +IAAG  + LA+  +G V+++G  S   LG G    
Sbjct: 483 GDTSGGRRPSP---AQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-- 537

Query: 196 ELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
              PRA       G+ V+  V+AG  H +ALDSSG V+ WG    G LG G    + +P 
Sbjct: 538 PRGPRAPAVV--PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPG 595

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +S L + +   + A    +  L   GSV+ +G    G LG  D   + + +  R+  SL
Sbjct: 596 RVSGLPAGIQA-IVAGPSYSVALGADGSVWTWGENSNGQLG--DGTTTARPVPARV--SL 650

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
            A  V+ +ST   HTV +   G L+ +G N   QLG+ TL
Sbjct: 651 PATLVA-LSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTL 689



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 162/415 (39%), Gaps = 73/415 (17%)

Query: 3   ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           I  G  H+L + N +V++ G++  G LG G  T++    T         VV ++A + H+
Sbjct: 152 IAAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRS---TPAKVAGLTEVVAIAAGDFHS 208

Query: 63  AFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + + G V+  G N S   G      R T   +     + AL G     V A       
Sbjct: 209 LALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASST---- 264

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 175
            T+ G V   G NT+GQLG+G  +      S+ PLE  G   VV +A+G S+ LA+ G+ 
Sbjct: 265 -TLGGKVWAWGDNTYGQLGNGGDV-----SSLLPLEVPGLTQVVALASGTSHSLALRGDD 318

Query: 176 VVYSFGS----------------------------------------GSNFCLGHGEQHD 195
            V+++G                                         G N  LG G    
Sbjct: 319 SVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGS 378

Query: 196 ELQPRAIQTFRRKGIHV------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
                   + R     V        ++AGD HV    + G V+ WG    G LG G  + 
Sbjct: 379 GQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS 438

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           +  P  LSS  + +   + A    +  L   G+V+ +G   +G LG    G      RP 
Sbjct: 439 RPAPVRLSSTLTSVRA-LSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGG-----RRPS 492

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD-TLRGCLEPTEI 363
                     ++I+ G YH++ +   G ++ +GDN   QLG   T RG   P  +
Sbjct: 493 PAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVV 547



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 26/300 (8%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +++A  NH+ +V  +G V+  G N+    G   T +    P  V  L GV    V AG  
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH-STPTQVVGLTGVTA--VAAGNT 108

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  L   G V T G+NT GQLG G +  R  P  +A L     V  IAAG  + LA+  
Sbjct: 109 HSMALREEGTVWTWGTNTDGQLGDGVS-QRSVPAQVAGLT---GVTAIAAGNLHSLALI- 163

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           NG V+++G+ +   LG G       P  +         VV ++AGD H +AL   G V+ 
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTVWA 219

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGW 288
           WG  Y G LG G    ++ P  +S L   +A+        A    T      G V+ +G 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTL----GGKVWAWGD 275

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG    G     L P  +  L    V  +++G  H++ +     ++ +GDN +AQ
Sbjct: 276 NTYGQLG---NGGDVSSLLPLEVPGLT--QVVALASGTSHSLALRGDDSVWAWGDNAQAQ 330



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)

Query: 99  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
           +++G P + + AGLN + ++T  G V   G+N  GQLG G TL   TP  +  L     V
Sbjct: 45  SVQGRPYR-LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLT---GV 100

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
             +AAG ++ +A+   G V+++G+ ++  LG     D +  R++         V  ++AG
Sbjct: 101 TAVAAGNTHSMALREEGTVWTWGTNTDGQLG-----DGVSQRSVPAQVAGLTGVTAIAAG 155

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           + H +AL + G V+ WG    G LG G    ++ P  ++ L     V + A    +  L 
Sbjct: 156 NLHSLALIN-GAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALK 212

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR--- 335
             G+V+ +G    G LG    G  D    P  +  L    +  ++ G  H+V  +     
Sbjct: 213 RDGTVWAWGGNYSGQLG---DGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLG 267

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           G+++ +GDN   QLG+      L P E+
Sbjct: 268 GKVWAWGDNTYGQLGNGGDVSSLLPLEV 295



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 144/352 (40%), Gaps = 44/352 (12%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S + SVFS GS+  G LG+    TQ    T   + +    ++  A+   
Sbjct: 757  LASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ----TSPRWLTGPECIEAVAAGAL 812

Query: 62   AAFVLQ-SGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +  L   G V+  GDN S   G    T R  P   P L   +       + AG +    
Sbjct: 813  FSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA------IAAGSDHALA 866

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            +   G V   G+N  GQLG G T  R  P  +   +E+  VV +A G  + LAV  +G V
Sbjct: 867  VRADGTVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADGTV 923

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            +++G+  +  LG G       P  + T    G+  +  ++G +H +AL   G V+ WG  
Sbjct: 924  WAWGANGSGQLGDGTTTSRTLPVFVSTL--SGVQAI--ASGAQHSLALAEGGVVWAWGAN 979

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LG G    +T P  +S L     VQ         + +  G V+ +G    G LG  
Sbjct: 980  GSGQLGDGTTTSRTRPVQVSGLS---GVQGLVAGASFSLALTPGKVWSWGNNSAGQLG-- 1034

Query: 298  DRGVSDKVLRPR-------ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
                 D  L  R        L S  A     +S G  HTVV+        +G
Sbjct: 1035 -----DGTLNSRSQPGAGPTLSSFVA-----LSAGAQHTVVLRSDDSFLSWG 1076


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPEPIGALAGQHIVHVAC 91

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 169
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 347
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 348 QLG 350
           QLG
Sbjct: 326 QLG 328



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 10/261 (3%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           K+V  G N + FL   G V+TCG NT GQLGH     +P P      + +   V +A G 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEPIGALAGQHI---VHVACGE 93

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVA 224
           S+ +A++  G V+S+G+GS+  LG     D +  PR I+   ++ I  +++S G+ H +A
Sbjct: 94  SHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCLA 151

Query: 225 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           L + G  +TWG+   G LG G E   +  P+ + SL      QV A    +F L  +G+V
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           +G+G    G LG  D    +    P  +  LR+  V  IS G  HT V+T  G +F FG 
Sbjct: 212 FGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 344 NERAQLGHDTLRGCLEPTEIF 364
               QLGHD++   + P  + 
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVL 289



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E ++      I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---EPIGALAGQHIVHVACGESHSVAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQVF+ G  S    G       +  PRL++ L      Q++ G      L   G   
Sbjct: 100 SDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  S
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           +  LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   +  T   V  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLA 264
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 8/143 (5%)

Query: 234 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           WG    G  G G  +   +PEP     +      +V      +  L++ G VY  G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG    G      +P  + +L   H+  ++ G  H+V ++D+G++F +G     QLG 
Sbjct: 64  GQLGHESEGS-----KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118

Query: 352 DTLRGCLEPTEIFIQEMEEDTGL 374
            T+   +    + I+++ + T L
Sbjct: 119 TTIEDAVTVPRL-IKKLNQQTIL 140


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 46  FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
           FP A     V   +N      HAA V + G+VF+ G+ S    GH   +  +  P+L+EA
Sbjct: 299 FPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIEA 357

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 156
           L     + V  G   +  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE + 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI- 416

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  VR +
Sbjct: 417 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAA 474

Query: 217 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
            G  H  A+             SS  ++TWG G  G LGH D+  K +P  ++ L  H  
Sbjct: 475 CGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVA-LAEHNV 533

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
            QV      T  L  +G VY  G   +G LG P    +D  L   +   L    V +I+ 
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQ---ADGKLPILVEGKLSESFVEEIAC 590

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G YH  V+T R  ++ +G     +LGH
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGH 617



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 128/274 (46%), Gaps = 22/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S     +  G+   G+LGHG + +  V   R+N P    HV  +S  
Sbjct: 366 VACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP-KRVNGPLEGIHVSYISCG 424

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLKGLRTVRAACGVWHTAAV 483

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                            + T G    G+LGH D   +  P  +A  E   +V Q+A G S
Sbjct: 484 VEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEH--NVCQVACGHS 541

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D   P  ++    +   V  ++ G  HV  L 
Sbjct: 542 LTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESF-VEEIACGAYHVAVLT 599

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 360 NT-NIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 417

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 418 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 477

Query: 272 RKTFVLVDTG------------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+               ++ +G    G LG  D+   +  L P  + +L  H+V
Sbjct: 478 WHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDK---EAKLVPTCV-ALAEHNV 533

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
            Q++ G   TV +T  GR++  G     QLG+    G L      + +E F++E+
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEI 588



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 478

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            S  +FT GD      GH D    +  P  V   +   C QV
Sbjct: 479 HTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV-PTCVALAEHNVC-QV 536

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  LT  G V+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQA-DGKLPILVEGKLSESFVEEIACGAYHV 595

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 640



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 14/159 (8%)

Query: 18  VFSCGSSLCGVLGHGPETTQ----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           +F+ G    G LGH  +  +    CV+    N      V QV+   +    +  SG+V+T
Sbjct: 501 LFTWGDGDKGRLGHVDKEAKLVPTCVALAEHN------VCQVACGHSLTVALTTSGRVYT 554

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G       G+   +  +  P LVE  L     +++  G      LT R  V+T G   +
Sbjct: 555 MGSPVYGQLGNPQADGKL--PILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGAN 612

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           G+LGHGDT DR TP  +  L++   V  IA G ++  A+
Sbjct: 613 GRLGHGDTDDRNTPTLVEALKD-KDVKSIACGTTFTAAI 650



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESFVEEIACGAY 593

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G  FT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTTFTAAICL 652

Query: 121 RGHV 124
              V
Sbjct: 653 HKWV 656


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+VS G  H +AL  +  V++WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 141/293 (48%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ++ G  + LA++    V+S
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFS 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV+ G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQVS   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVSCGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +S VFS G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 141 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G    G LG  P T + +   R I   +   +VQ++    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVPRNIKSLTDIQIVQIACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 163/343 (47%), Gaps = 22/343 (6%)

Query: 39   VSFTRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRP 90
            V  ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      P
Sbjct: 2979 VGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVP 3038

Query: 91   IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
            I  PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ 
Sbjct: 3039 I--PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3096

Query: 149  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
            I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     
Sbjct: 3097 IEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL-- 3153

Query: 209  GIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
            G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213

Query: 267  VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
            +    + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGA 3270

Query: 327  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
             H + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3271 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIELVDVAAGG 4106

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4107 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4165

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4166 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4223

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4224 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4284 EGQLG---DGTTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4093

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  +V +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4094 LRGI-ELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4212

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4213 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4270 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       +V V+A   H
Sbjct: 4050 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIELVDVAAGGAH 4108

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4109 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4167

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4168 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4226

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4227 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4284

Query: 240  GALGHG 245
            G LG G
Sbjct: 4285 GQLGDG 4290



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4013

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4073

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4133

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4134 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4190

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4191 CKVPMKI 4197



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3294

Query: 244  HG 245
            +G
Sbjct: 3295 NG 3296



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3284

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4216

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4217 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4275

Query: 124  VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T  + RP    + P  +   V ++A G ++ LA
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRP---RLVPALQGKKVNRVACGSAHTLA 4321



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3948 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4007

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4008 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4091


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 250
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 85  RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 201
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 262 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           + SL  +   +++ G   TV +T  G++   G++   QLG+
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGN 333



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 17/312 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +++VS  E+H   +   G V+ CG+N     G+ +T   I  P  VE L  V    ++AG
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNT-IDINSPIPVEGLNKV--SSISAG 233

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             ++  L   G V T G N +GQLG G T  R +P     ++ +  ++ I++G S+ LA+
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSP---VQVQNLSGIIAISSGNSHSLAL 290

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             +G V+++G   +  LG G  + +  P  +Q        +V +S G  + +AL + G V
Sbjct: 291 KDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS----GIVSISCGFYYSMALKNDGTV 346

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           + WG    G LG G   D+    P+S L   +A+  C     +  L + G+V+ +G+  F
Sbjct: 347 WVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAI-ACGVNH-SMALRNDGTVWTWGFNAF 404

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG   +   +  +    LD + A     I+ G  H++ + D G ++ +GDN+  QLG+
Sbjct: 405 GQLGDGTKVSKNTAVPISGLDGIIA-----ITCGTSHSMALKDDGTVWAWGDNQYGQLGN 459

Query: 352 DTLRGCLEPTEI 363
            T      P+++
Sbjct: 460 GTFISNTTPSQV 471



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 29/369 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 55
           ++++ G  HTL L S+ +V++CG +  G LG+        +   IN P        V  +
Sbjct: 178 IKVSGGESHTLALESDGTVWACGENDYGQLGNN-------NTIDINSPIPVEGLNKVSSI 230

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           SA + ++  +   G V+T G+N     G   T      P  V+ L G+    +++G + +
Sbjct: 231 SAGKYYSMALKSDGTVWTWGENDYGQLGD-GTTATRLSPVQVQNLSGIIA--ISSGNSHS 287

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             L   G V   G N  GQLG G T  +  P  +  L     +V I+ G  Y +A+  +G
Sbjct: 288 LALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS---GIVSISCGFYYSMALKNDG 344

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+ +G  ++  LG G   D  +  A+      G  V+ ++ G  H +AL + G V+TWG
Sbjct: 345 TVWVWGDNTSGQLGDGTTTD--RNTAVPVSGLDG--VIAIACGVNHSMALRNDGTVWTWG 400

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G ++ K    P+S L   +A+  C     +  L D G+V+ +G   +G LG
Sbjct: 401 FNAFGQLGDGTKVSKNTAVPISGLDGIIAI-TCGTSH-SMALKDDGTVWAWGDNQYGQLG 458

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G       P  + +L    +  I  G   +  +   G ++ +G+NE  +LG     
Sbjct: 459 ---NGTFISNTTPSQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTT 513

Query: 356 GCLEPTEIF 364
             + PTE  
Sbjct: 514 RVIYPTETL 522



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 29/366 (7%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H++ + N  +V++ G +  G LG G   T+    T +       ++ ++   
Sbjct: 378 IAIACGVNHSMALRNDGTVWTWGFNAFGQLGDG---TKVSKNTAVPISGLDGIIAITCGT 434

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G V+  GDN     G+  T      P  V  L G+  K +  G + +  L 
Sbjct: 435 SHSMALKDDGTVWAWGDNQYGQLGN-GTFISNTTPSQVSNLSGI--KSIFCGYSTSFALK 491

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVV 177
             G V   G+N +G+LG G      T + I P E   +G +  I+ G S+ LA+  +G V
Sbjct: 492 PDGTVWAWGNNEYGELGKG-----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDGTV 546

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G    +  P  +Q     GI    +SAG  H +AL S G V+ WG+ 
Sbjct: 547 WAWGDNRYGQLGDGTTTIKSLP--VQVSGISGI--TAISAGGSHSLALKSDGTVWAWGQN 602

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G + D+  P  +S L     +  C    ++F L + G+V+ +   G  S   P
Sbjct: 603 NVGQLGDGTKEDRNTPVQVSELSGITVISNCI--YRSFALKNDGTVWVW---GSDSYNLP 657

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
                +K+  P  +  L    +  I  G YH + + + G ++ +G N   Q G  T    
Sbjct: 658 ----LEKMTMPIQISGLSG--IIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTT 711

Query: 358 LEPTEI 363
             P ++
Sbjct: 712 NIPVQV 717



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 139/353 (39%), Gaps = 61/353 (17%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSASENHAAFVLQSGQVF 72
           +V++ G++  G LG G  T       R+ +P+       +  +S   +H   +   G V+
Sbjct: 495 TVWAWGNNEYGELGKGFTT-------RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVW 547

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
             GDN     G   T      P  V  + G+    ++AG + +  L   G V   G N  
Sbjct: 548 AWGDNRYGQLGDGTTTIKSL-PVQVSGISGITA--ISAGGSHSLALKSDGTVWAWGQNNV 604

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NFCLGHG 191
           GQLG G   DR TP  ++   E+  +  I+       A+  +G V+ +GS S N  L   
Sbjct: 605 GQLGDGTKEDRNTPVQVS---ELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPL--- 658

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
               E     IQ     GI  + +  G  H +AL + G V+ WGK   G  G G      
Sbjct: 659 ----EKMTMPIQISGLSGI--IAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTN 712

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           +P  +S L    A+ V     ++  L   G+V+ +G                     RIL
Sbjct: 713 IPVQVSGLSGVKAIAVGG--NRSIALKSDGTVWQWG---------------------RIL 749

Query: 312 DSLRAHHVSQISTG-----------LYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            S+    V   +T            + + V + + G++F +G N+  QLG  T
Sbjct: 750 VSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGT 802



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 137/350 (39%), Gaps = 71/350 (20%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  H L + N  +V++ G +  G LG G  T + +    +     + +  +SA  +H
Sbjct: 530 ISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLP---VQVSGISGITAISAGGSH 586

Query: 62  AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVE------------ALKG---- 102
           +  +   G V+  G N+    G     D N P+    L              ALK     
Sbjct: 587 SLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTV 646

Query: 103 ---------VPCKQVTAGLNFTGF---------------LTIRGHVHTCGSNTHGQLGHG 138
                    +P +++T  +  +G                L   G V   G N  GQ G G
Sbjct: 647 WVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDG 706

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
            T     P  ++ L  V +   IA G +  +A+  +G V+ +G               + 
Sbjct: 707 TTTTTNIPVQVSGLSGVKA---IAVGGNRSIALKSDGTVWQWG----------RILVSVS 753

Query: 199 PRAIQTF----RRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           P  ++T+    +  G+  +V +S    + VAL + G V+TWG    G LG G    +   
Sbjct: 754 PSTVETWTTARQVDGLSEIVSIS----NNVALKNDGKVFTWGANDYGQLGDGTTTARVTV 809

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            P+S L+      V +    + VL++ G++  +G   FG LG  +RG  D
Sbjct: 810 APVSGLEG--VAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGERGFYD 857


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 160/360 (44%), Gaps = 36/360 (10%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
           +  V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+V TC
Sbjct: 432 DREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVP------CKQVTA--GLNFTGFLTIRGHVHT 126
           G N +  CG   T R       V  L  +P        QV A  G   T  +T+ G   T
Sbjct: 491 GYNDNGQCGQGGTAR-------VSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAAT 543

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------TGNGVVYSF 180
           CG N  GQLGHG+T     PK +  LE    +V++ +   Y   +      +G   +Y+F
Sbjct: 544 CGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LGH +  D   P+ ++    +  HVV V+ G  H + + ++G  + +GK   G
Sbjct: 602 GRNDYGQLGHNDSIDRKVPQHVEAMGDQ--HVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 241 ALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LG     ++ +P  + + L+ H  +++      T VL     ++ FG   +G LG    
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 300 GVS---------DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             S          +    R+++ L    + + + G YHTV V+D G ++ FG N   QLG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + +A+T +G V + G 
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQ-KEIIQIGAGNEHTIALTVDGKVLTCGY 492

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N   G G          +       I  V    G EH + +   G   T G  Y G L
Sbjct: 493 NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS----VYGFGWMGFGSLGFP 297
           GHG+   +++P+ + SL++ +   V C+         + GS    +Y FG   +G LG  
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHN 612

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           D  +  KV  P+ ++++   HV  ++ G YHT+VVT  G+ F FG N+  QLG D++   
Sbjct: 613 D-SIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQ 669

Query: 358 LEPTEI 363
           L P ++
Sbjct: 670 LVPVQV 675



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 150/353 (42%), Gaps = 27/353 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +QI  G  HT+ L  +  V +CG +  G  G G     +      ++   + + V   + 
Sbjct: 469 IQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNG 528

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            E H   V   G+  TCG N     GH +T      P++V +L+    + V+     T  
Sbjct: 529 CE-HTILVTMDGRAATCGYNYRGQLGHGNTASESV-PKIVRSLENRIVRLVSCSYYHTVM 586

Query: 118 L-----TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                 + + +++T G N +GQLGH D++DR  P+ +  + +   VV +A G  + + VT
Sbjct: 587 ACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGD-QHVVSVACGQYHTMVVT 645

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             G  ++FG      LG     ++L P  ++    K    + +  G  H + L S  +++
Sbjct: 646 ATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKH-ECLEIRCGYYHTIVLCSGAHLF 704

Query: 233 TWGKGYCGALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +G+   G LG G             +   +    +  L+    V+       T  + D 
Sbjct: 705 AFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDN 764

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G +Y FG    G LG  D   +++ + P  +D      V+ ++ G YHTVV+T
Sbjct: 765 GVMYVFGRNNHGQLGTGD---TNERVYPFPIDDFVGKRVALVAAGFYHTVVLT 814


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2992 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3049

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3108

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3166

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3167 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3226

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3227 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3284 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3309



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3020

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3021 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3080

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3081 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3139 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3195

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3196 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3241



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDVAAGG 4104

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4163

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3987 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESVQHVFIKK 4045

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  G V++ G    G+LGHG+      P+ +  L  +  VV +AAG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGI-EVVDVAAGG 4104

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4165 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4224

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+
Sbjct: 4225 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 4282 EGQLGDGTTNAIQRP 4296



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + +SG+V+T   NS               P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD-----------ALAPQLVQGLASRNIIKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE+ P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     +       VV V+A   H
Sbjct: 4048 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGIEVVDVAAGGAH 4106

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4107 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4165

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4166 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4224

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 240  GALGHG 245
            G LG G
Sbjct: 4283 GQLGDG 4288



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3116

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3292

Query: 244  HG 245
            +G
Sbjct: 3293 NG 3294



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +   +  P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNS----------DALAPQLVQGLASRNIIKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+  + P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4214

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 36/226 (15%)

Query: 141  LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----E 196
            LDR TP     LEEV   ++     S  L V                    E HD    E
Sbjct: 3891 LDRRTPLPRLFLEEVAKKIRELMADSENLDVLH------------------ESHDIFKRE 3932

Query: 197  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
               + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +P P 
Sbjct: 3933 QDEQLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPC 3983

Query: 257  SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
             +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+S++ 
Sbjct: 3984 EALAALRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESVQH 4040

Query: 317  HHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P
Sbjct: 4041 VFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 4086



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3019

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3020 EATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3077 DDGKLGHFSRMNCDKPRLI 3095


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3242



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           + Q++ +E     + ++G+V+    NS       DT      P+LV+ L      ++ A 
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DT----LGPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 33/237 (13%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVG------------------- 156
            G ++  G N  GQLG   G  +  PTP     ++ P++ +G                   
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 157  -SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
              V+ IA  +G +  L +T +  V+S+G G    LG G       P  I +    G+ VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVV 4072

Query: 214  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            +V  G +  VAL  SG VYTWGKG    LGHG +     P  +  L+    + +      
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4132

Query: 274  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                 + G VY +G    G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4186



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + QIA      L ++ NG VY     S          D L P+ +Q    + I  +   +
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS----------DTLGPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4083 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4187



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3075

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 141 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G    G LG  P T + +   R I   +   +VQ++    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVPRNIKSLTDIQIVQIACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VVQV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 5/269 (1%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY   W  F        G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVY--TWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4270 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 12/282 (4%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 231  VYTWG--KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            VYTW   + Y   LGHG +     P  +  L+    + +           + G VY +G 
Sbjct: 4223 VYTWQVFRDY-HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4281

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
               G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4282 NDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 244  HG 245
            +G
Sbjct: 3295 NG 3296



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4107

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G +FT G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4108 SACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4166

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4225

Query: 180  FGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +    ++  LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG   
Sbjct: 4226 WQVFRDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 239  CGALGHG 245
             G LG G
Sbjct: 4284 EGQLGDG 4290



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           VVQ+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.8 bits (107), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 9/170 (5%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 64   FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
             + +SG V+T      F   HR    ++  + RPR V+ L+G     +  G       T 
Sbjct: 4216 ALTKSGAVYTW---QVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4272

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             G V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4273 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4321



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 244  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 303  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 360  PTEI 363
            P  I
Sbjct: 3094 PRLI 3097


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 22/332 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACG 327

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 328 EYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHS 386

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+   
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEV 444

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L 
Sbjct: 445 MSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALT 504

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +
Sbjct: 505 TSGHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEV 561

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           F +G     +LGH        PT  F++ +++
Sbjct: 562 FTWGRGANGRLGHGDTEDRRSPT--FVEALKD 591



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 28/348 (8%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 57
           QI  G  H  L++    VF+ G    G LGHG +      F+R   + F +  +V  V+ 
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDN----DFSRPHLVEFLAVNNVDFVAC 326

Query: 58  SENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
            E H   V  SG +FT GD  +++   GH          R+   L+G+    V  G   +
Sbjct: 327 GEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHS 386

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 171
              T  G + T G  T G LGHGD    P P+ +  L  +   +++A G  +  A+    
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGL-KTIKVACGVWHTAAIIEVM 445

Query: 172 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +G  +    ++++G G    LGHG +   L P  +        H  +++ G    VAL
Sbjct: 446 SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH--QLACGHTMTVAL 503

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +SG+V+T G    G LG+    D  LP  +   L      ++        VL     V+
Sbjct: 504 TTSGHVFTMGGTAYGQLGNPLS-DGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVF 562

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +G    G LG    G ++    P  +++L+  +V  IS G   T  +
Sbjct: 563 TWGRGANGRLG---HGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI 607



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACG 434

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH  +      P  V AL      Q+
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 493

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 552 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 597



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+++++     +H  +++ G  HV  +   G V+TWG+   G LGHG + D + P 
Sbjct: 254 DVLTPKSLESNVVLDVH--QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            +  L  +    V   +  T  +  +G ++ +G  G  + G    G       P R+   
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWG-DGTHNAGLLGHGTEVSHWIPKRVSGP 370

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+ I
Sbjct: 371 LEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQI 422



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 225 LDSSGYVYTWGKGYC-GALGHGD------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           ++S G VY WG+ +C G L  G       +ID   P+ L S       Q+    R   ++
Sbjct: 223 IESLGDVYVWGEVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G V+ +G    G LG    G+ +   RP +++ L  ++V  ++ G YHT  V+  G 
Sbjct: 283 TRQGEVFTWGEESGGRLG---HGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGD 339

Query: 338 LFGFGD--NERAQLGHDT 353
           LF +GD  +    LGH T
Sbjct: 340 LFTWGDGTHNAGLLGHGT 357


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 141 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G    G LG  P T + +   R I   +   +VQ++    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVPRNIKSLTDIQIVQIACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  QV AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 163/352 (46%), Gaps = 20/352 (5%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M+I  G  H+L +S   +V++ G +  G LG   E T          PS   +V V + E
Sbjct: 52  MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGG--EATPLQRLAPAPLPSPRDIVSVVSGE 109

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++G V+  G NSS   G   T   +  P  V  L  V    V AG   +  L 
Sbjct: 110 AHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVT-PMQVAGLTDVVA--VAAGDFHSLALR 166

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G+N HGQLG G T    TP+ +  LE    VV +AAG  + LAV  +G V +
Sbjct: 167 GDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE---GVVALAAGFDFTLAVMDDGTVRA 223

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+ S+  LG G     L P  ++     GI  V  +AG  H VAL   G V+TWG    
Sbjct: 224 WGANSSGQLGDGTFTQRLAP--VEVAHISGISAV--TAGTYHAVALGKDGGVWTWGANSS 279

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D+ +P  +  L+   A  V +    +  L++ GSV  +G  G G LG  D 
Sbjct: 280 GQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSGQLG--DS 335

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G  D+   P  +  LR+  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 336 GTDDRAT-PGEVPGLRS--VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGH 384



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 25/372 (6%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            ++ GR  +L +  + + ++ G++  G LG G   +Q V        S   V  +SA  +H
Sbjct: 955  VSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPK---QVTSVKRVRAMSAGAHH 1011

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
               + + G V+T GDN+    G   +      PR V  L+ V  + V AG  F+  + + 
Sbjct: 1012 VVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDV--EAVAAGEQFSVAVLVG 1069

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G  H  GSN +GQLG G T  R TP  +    + L +   V  + A   + +A+  +G V
Sbjct: 1070 GGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQ--PVRTVRAWAQHAVALMADGTV 1127

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
             ++G  ++  LG G       P  ++        VV VS G  H +AL S G V+ WG  
Sbjct: 1128 QAWGDNAHGQLGDGTTERRAAPVVVRGL----TGVVAVSTGAWHSLALRSDGTVWAWGAN 1183

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LG G  + +T P  ++ L+    V + A       +   GSV+ +G+  FG LG  
Sbjct: 1184 GFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLG-- 1239

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
              G ++  L P  ++ L   +V+ ++ G +H++ +   G L  +G+N   QLG  T  G 
Sbjct: 1240 -DGTAESRLLPVRVEGL--SNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGT--GT 1294

Query: 358  LEPTEIFIQEME 369
               + ++++ ++
Sbjct: 1295 TRYSRVWVKGVD 1306



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G +H+L  + + +V+S G +  G LG G   T       +     + +  V+AS +H
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDG---TTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G V+  G N++   G   T R   RP  V  L  V    V  G + T  L   
Sbjct: 462 SLAVGADGTVWAWGRNAAGQLGDGST-RDRARPVAVSGLTSVVA--VATGGSHTMALRGD 518

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N  GQLG G T+DR TP  +A L+   SVV +AAG  + +A+ G+G V+++G
Sbjct: 519 GTVWAWGYNALGQLGDGTTVDRLTPVRVARLD---SVVAVAAGTYFSMALRGDGTVWTWG 575

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    +G G     L P  +        +V RV+AG  H +A+   G V+ WG    G 
Sbjct: 576 EGFEGQVGDGGGVQRLFPVQVAGL----TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQ 631

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G   D+  P  +  L    A  V   +  +  L   GSV  +G+ G+G LG    G 
Sbjct: 632 LGDGTWSDRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLG---DGT 686

Query: 302 SDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
               +RP +   L  ++A H S +     H + +   G L G+G N   QLG        
Sbjct: 687 FTSRVRPAVVPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLGLGAAGWSS 741

Query: 359 EPTEI 363
            P ++
Sbjct: 742 RPVQV 746



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 156/365 (42%), Gaps = 17/365 (4%)

Query: 1    MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M +  G  H L    + ++++ G++  G LG G  T    S T +       V  VSA  
Sbjct: 903  MSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP---SPTPVRVKGLEGVASVSAGR 959

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  V Q G  +  G N S   G   TN     P+ V ++K V  + ++AG +    L 
Sbjct: 960  AFSLAVRQDGTAWAWGANPSGQLGD-GTNHSQRVPKQVTSVKRV--RAMSAGAHHVVALG 1016

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G NT GQLG G +   PT      + E+  V  +AAG  + +AV   G  ++
Sbjct: 1017 EDGAVWTWGDNTLGQLGDGTSA--PTWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHA 1074

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 238
            +GS     LG G+    L P  ++    K    VR V A  +H VAL + G V  WG   
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LG G    +  P  +  L   +AV   A    +  L   G+V+ +G  GFG LG   
Sbjct: 1135 HGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWH--SLALRSDGTVWAWGANGFGQLG--- 1189

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
             G +     P  +  L+   V  I  G YH + V   G ++ +G N   QLG  T    L
Sbjct: 1190 DGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRL 1247

Query: 359  EPTEI 363
             P  +
Sbjct: 1248 LPVRV 1252



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 159/370 (42%), Gaps = 27/370 (7%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHG---PETTQC---VSFTRINFPSAAHVVQVSASEN 60
            ++   ++      + GS+  G LG G   P  T     +  +++  P    V  V A   
Sbjct: 1061 QFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQP----VRTVRAWAQ 1116

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            HA  ++  G V   GDN+    G   T R    P +V  L GV    V+ G   +  L  
Sbjct: 1117 HAVALMADGTVQAWGDNAHGQLGDGTTERRAA-PVVVRGLTGVVA--VSTGAWHSLALRS 1173

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V   G+N  GQLG G TL R TP  +A L++V   V I AG  + LAV  +G V+++
Sbjct: 1174 DGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV---VAIGAGGYHALAVRSDGSVWAW 1230

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G  +   LG G     L P  ++       +V  V+ GD H +AL + G +  WG    G
Sbjct: 1231 GYNAFGQLGDGTAESRLLPVRVEGLS----NVTSVAGGDHHSLALLADGSLGAWGNNAAG 1286

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LG G    +     +  +     V+V A    T  L   G+V+ +G      LG  D  
Sbjct: 1287 QLGDGTGTTRYSRVWVKGVDG--VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDS 1344

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
               +++ PR +  L    V+ I  G  H+  V  +G ++ +G N   QLG        EP
Sbjct: 1345 TRTRIV-PRPVPGLSG--VTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEP 1401

Query: 361  TEIFIQEMEE 370
              + ++E+ E
Sbjct: 1402 --LRVKELAE 1409



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 158/355 (44%), Gaps = 21/355 (5%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H+L ++ + SV++ G++  G LG G   ++ +   R++    A  V      + 
Sbjct: 805  VASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIP-ARVDGLQGAVAVAAGGDASL 863

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 120
            A  +L  G  +  G N+    G   T+      R V     +P   ++  L  T  L   
Sbjct: 864  A--LLADGTAWAWGANAHGQLGDGSTSD-----RAVPGQLKLPSNIMSVALGETHGLAAG 916

Query: 121  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G +   G+N  GQLG G T   PTP  +  LE V SV   +AG ++ LAV  +G  ++
Sbjct: 917  EDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV---SAGRAFSLAVRQDGTAWA 973

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G+  +  LG G  H +  P+ + + +R    V  +SAG  HVVAL   G V+TWG    
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR----VRAMSAGAHHVVALGEDGAVWTWGDNTL 1029

Query: 240  GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G      + P  +  L+   A  V A ++ +  ++  G  + +G   +G LG   
Sbjct: 1030 GQLGDGTSAPTWMWPRQVPELRDVEA--VAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGK 1087

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
             G     ++ RI  S     V  +     H V +   G +  +GDN   QLG  T
Sbjct: 1088 TGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT 1142



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 19/251 (7%)

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQI 161
            P  ++ AG   + +++  G V   G NT GQLG   T L R  P   APL     +V +
Sbjct: 49  APPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAP---APLPSPRDIVSV 105

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
            +G ++ LA+   G V+++G  S+  LG G   D + P  +         VV V+AGD H
Sbjct: 106 VSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGL----TDVVAVAAGDFH 161

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +AL   G V+ WG  + G LG G       PEP+  L+    V + A    T  ++D G
Sbjct: 162 SLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMDDG 219

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRLF 339
           +V  +G    G LG       D     R+     AH   +S ++ G YH V +   G ++
Sbjct: 220 TVRAWGANSSGQLG-------DGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVW 272

Query: 340 GFGDNERAQLG 350
            +G N   QLG
Sbjct: 273 TWGANSSGQLG 283



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            ++  GR HTL++  + +V + G +  G LG G  T +         P    V  V++   
Sbjct: 754  RLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPC---VRSVASGVL 810

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            H+  +   G V+  G N     G   T   +  P  V+ L+G          +    L  
Sbjct: 811  HSLALACDGSVWAWGANGRGQLGDGTTASRVI-PARVDGLQGAVAVAAGGDASLA--LLA 867

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G     G+N HGQLG G T DR  P     L+   +++ +A G ++ LA   +G ++++
Sbjct: 868  DGTAWAWGANAHGQLGDGSTSDRAVPGQ---LKLPSNIMSVALGETHGLAAGEDGALWAW 924

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            G+  +  LG G       P      R KG+  V  VSAG    +A+   G  + WG    
Sbjct: 925  GANGSGQLGEGSTTPSPTP-----VRVKGLEGVASVSAGRAFSLAVRQDGTAWAWGANPS 979

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G    + +P+ ++S+K   A+   A       L + G+V+ +G    G LG  D 
Sbjct: 980  GQLGDGTNHSQRVPKQVTSVKRVRAMSAGAHH--VVALGEDGAVWTWGDNTLGQLG--DG 1035

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              +   + PR +  LR   V  ++ G   +V V   G    +G NE  QLG       L 
Sbjct: 1036 TSAPTWMWPRQVPELR--DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLT 1093

Query: 360  PTEIFIQ 366
            P ++ I+
Sbjct: 1094 PVQVRIE 1100



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 149/356 (41%), Gaps = 28/356 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L+   SV + G++  G LG      +    T    P    V  V     HA  +   G +
Sbjct: 315 LLEAGSVLAWGANGSGQLGDSGTDDRA---TPGEVPGLRSVAAVVGGAQHALALRGDGTL 371

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVHTCGSN 130
           +  G   +   GH  + R +    L   L+      + AG +F     +  G V + G N
Sbjct: 372 WAWGGGLAGQLGHGGSERHVVPAPL---LRLADVASMAAG-SFHSLAALGDGTVWSWGRN 427

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           T+GQLG G T +R    +   +E +  +  +AA   + LAV  +G V+++G  +   LG 
Sbjct: 428 TYGQLGDGTTAER---HAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGD 484

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D  +P A+         VV V+ G  H +AL   G V+ WG    G LG G  +D+
Sbjct: 485 GSTRDRARPVAVSGL----TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDR 540

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LR 307
             P  ++ L S   V V A    +  L   G+V+ +G       GF  +         L 
Sbjct: 541 LTPVRVARLDS--VVAVAAGTYFSMALRGDGTVWTWG------EGFEGQVGDGGGVQRLF 592

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           P  +  L   +V++++ G  H + V   G ++ +GDN   QLG  T      P ++
Sbjct: 593 PVQVAGLT--NVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQV 646



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 23/321 (7%)

Query: 51   HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVT 109
             V +++    H   V   G V   G+N+S   G   T      P LV   +GVPC + V 
Sbjct: 751  RVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAG-PVLV---RGVPCVRSVA 806

Query: 110  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            +G+  +  L   G V   G+N  GQLG G T  R  P  +  L+   +V          L
Sbjct: 807  SGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG---DASL 863

Query: 170  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            A+  +G  +++G+ ++  LG G   D    RA+    +   +++ V+ G+ H +A    G
Sbjct: 864  ALLADGTAWAWGANAHGQLGDGSTSD----RAVPGQLKLPSNIMSVALGETHGLAAGEDG 919

Query: 230  YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
             ++ WG    G LG G       P  +  L+      V A +  +  +   G+ + +G  
Sbjct: 920  ALWAWGANGSGQLGEGSTTPSPTPVRVKGLEG--VASVSAGRAFSLAVRQDGTAWAWGAN 977

Query: 290  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
              G LG    G +     P+ + S++   V  +S G +H V + + G ++ +GDN   QL
Sbjct: 978  PSGQLG---DGTNHSQRVPKQVTSVK--RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL 1032

Query: 350  GHDTLRGCLEPTEIFIQEMEE 370
            G     G   PT ++ +++ E
Sbjct: 1033 GD----GTSAPTWMWPRQVPE 1049



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 1    MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + I  G YH L + S+ SV++ G +  G LG G   ++ +    +     ++V  V+  +
Sbjct: 1209 VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLP---VRVEGLSNVTSVAGGD 1265

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            +H+  +L  G +   G+N++   G   T    +    V+ + GV   +V AG   T  L 
Sbjct: 1266 HHSLALLADGSLGAWGNNAAGQLGD-GTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALR 1322

Query: 120  IRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
              G V T G NTH QLG GD  T  R  P+   P+  +  V  I AG  +  AV   G V
Sbjct: 1323 GDGTVWTWGDNTHSQLGAGDDSTRTRIVPR---PVPGLSGVTAIGAGARHSFAVGPKGTV 1379

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            +++G  S+  LG G+  +  +P  ++        V  VS G +  +A+   G V +WG  
Sbjct: 1380 WAWGRNSHGQLGLGDNANRAEPLRVKEL----AEVSVVSGGADFSLAMQRDGTVSSWGSS 1435

Query: 238  YCGALGHGDEIDKTLP 253
              GALG G    ++ P
Sbjct: 1436 LHGALGLGTAGQRSSP 1451



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQ 198
           L++P       +      ++IAAG  + L V+  G V+++G  ++  LG GE      L 
Sbjct: 34  LEQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPLQRLA 92

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P  + + R     +V V +G+ H +ALD +G V+ WG    G LG G   D+  P  ++ 
Sbjct: 93  PAPLPSPR----DIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAG 148

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L     V V A    +  L   G+V+ +G    G LG   RG ++  L P  +  L    
Sbjct: 149 LTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLG---RGHTEPGLTPEPVPGLEG-- 201

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           V  ++ G   T+ V D G +  +G N   QLG  T    L P E+
Sbjct: 202 VVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEV 246



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 29/368 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + + TG  HT+ L  + +V++ G +  G LG G   T     T +       VV V+A  
Sbjct: 503 VAVATGGSHTMALRGDGTVWAWGYNALGQLGDG---TTVDRLTPVRVARLDSVVAVAAGT 559

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  +   G V+T G+      G     + +F P  V  L  V   +V AG      L 
Sbjct: 560 YFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLF-PVQVAGLTNV--TRVAAGSAHA--LA 614

Query: 120 IRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +RG   V   G N  GQLG G   DR  P  +  L     +  ++ G S+ +A+ G+G V
Sbjct: 615 VRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLT---GITAVSGGRSHSMALHGDGSV 671

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++G      LG G     ++P  +      GI  +  S    HV+AL + G +  WG  
Sbjct: 672 RAWGYNGYGQLGDGTFTSRVRPAVVPGL--TGIQALHPS--HLHVLALHADGTLRGWGYN 727

Query: 238 YCGALGHGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G     + P  +  L     LAV     +  T ++   G+V  +G    G LG
Sbjct: 728 RFGQLGLGAAGWSSRPVQVRGLGRVDRLAVG----RAHTLMVRPDGAVLAWGENASGQLG 783

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G +     P ++  +    V  +++G+ H++ +   G ++ +G N R QLG  T  
Sbjct: 784 ---DGTTTHRAGPVLVRGVPC--VRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTA 838

Query: 356 GCLEPTEI 363
             + P  +
Sbjct: 839 SRVIPARV 846



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 5/151 (3%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            +++  G  HTL L  + +V++ G +    LG G ++T+     R   P  + V  + A  
Sbjct: 1309 VEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPR-PVPGLSGVTAIGAGA 1367

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             H+  V   G V+  G NS    G  D N     P  V+ L  V    V+ G +F+  + 
Sbjct: 1368 RHSFAVGPKGTVWAWGRNSHGQLGLGD-NANRAEPLRVKELAEVSV--VSGGADFSLAMQ 1424

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
              G V + GS+ HG LG G    R +P  +A
Sbjct: 1425 RDGTVSSWGSSLHGALGLGTAGQRSSPGQVA 1455


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2970 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3027

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3028 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3086

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3144

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3145 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3204

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3205 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3261

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3262 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3287



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2998

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2999 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3058

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3059 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3173

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3174 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3221



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4081

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4082 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4140

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4141 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4198

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4199 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4258

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4259 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4009 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4068

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4069 LRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4127

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4128 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4187

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4188 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4244

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4245 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4273



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 478

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 596

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 656

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4025 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAH 4083

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G +FT G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4084 SACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4142

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4143 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4201

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4202 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4259

Query: 240  GALGHG 245
            G LG G
Sbjct: 4260 GQLGDG 4265



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 534

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 593

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 652

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 653 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 711 GSN--DQCQHFDTLRITKPEP 729



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3036 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3270

Query: 244  HG 245
            +G
Sbjct: 3271 NG 3272



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3988

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4048

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4049 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4105

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4106 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4165

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4166 CKVPMKI 4172



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 479

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 539

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 596

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3142

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3143 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3201

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3202 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3303



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 707 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 752



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4191

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4192 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4250

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4251 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4296



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3923 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3982

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3983 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4066



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2905 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2955

Query: 244  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2956 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3009

Query: 303  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3010 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3069

Query: 360  PTEI 363
            P  I
Sbjct: 3070 PRLI 3073


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 17/349 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  GS++ G LG G    + +   R ++F  A  V Q++  EN+   +   GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     GH    +   R +L+  L     K++  G   T  +   G + + G N  GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 137 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
               D  +R TP+ +  L     +VQIA G  + +A+T +G +YS+GS     LG G   
Sbjct: 118 LNSVDCTER-TPRMVKAL-GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 195 -DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             E++P+ I T     + +  ++ G  H V +  SG V+ WG+   G LG  D   + +P
Sbjct: 176 VTEIKPKRIITL--AAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVP 233

Query: 254 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G     + PR + 
Sbjct: 234 CQLRTLRNAKVCYAACGEEFSVFLTLD-GGVFTCGAGMYGQLG---HGNGMNEILPRQVM 289

Query: 313 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   R    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTP 338



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 9/297 (3%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  +T+ I+N   V+SCG++  G LGH     +      ++   A    +++    
Sbjct: 38  QIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD---AFVFKKIACGSC 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V + GQ+F+ G N     G    +     PR+V+AL      Q+  G+  +  LT 
Sbjct: 95  HTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN 154

Query: 121 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G +++ GSN  GQLG G  T+    PK I  L  V  +  IA G  + + ++ +GVV++
Sbjct: 155 DGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAV-PIAFIACGGYHTVVISKSGVVFA 213

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG  +    + P  ++T R     V   + G+E  V L   G V+T G G  
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNA--KVCYAACGEEFSVFLTLDGGVFTCGAGMY 271

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G LGHG+ +++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 272 GQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 14/241 (5%)

Query: 128 GSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           GS  HG+LG G   D     P+ +    +   V QIA G +Y + +T +G VYS G+   
Sbjct: 5   GSTIHGELGLGGIEDENIFMPRQV-DFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LGH +    LQ    +  F  K     +++ G  H +A++  G +++WG    G LG 
Sbjct: 64  GQLGHEKARKRLQLIPGLDAFVFK-----KIACGSCHTLAVNEWGQLFSWGCNMKGQLGL 118

Query: 245 G--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
              D  ++T P  + +L + + VQ+      +  L + G +Y +G    G LG     V+
Sbjct: 119 NSVDCTERT-PRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVT 177

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           +  ++P+ + +L A  ++ I+ G YHTVV++  G +F +G N   QLG +  +  + P +
Sbjct: 178 E--IKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQ 235

Query: 363 I 363
           +
Sbjct: 236 L 236


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 2799

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3033

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2993



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 3796 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 3854

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 3855 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 3913

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3914 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3971

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3972 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4031

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4032 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4068



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3841

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 3842 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3960

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3961 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4018 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4046



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 3798 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAH 3856

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 3857 SACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 3915

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3916 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3974

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3975 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4032

Query: 240  GALGHG 245
            G LG G
Sbjct: 4033 GQLGDG 4038



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPI----QLIGGEQTLFAVTADGKLY 3761

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3762 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 3822 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 3878

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3879 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3938

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3939 CKVPMKI 3945



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3042

Query: 244  HG 245
            +G
Sbjct: 3043 NG 3044



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+S+G G    LG G       P+ I+    + + VV+V  G +  VAL   G VY+W
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-------KTFVLVDTGSVYGFG 287
           GKG    LGHG E     P+ L  L++ L    C  K+       K  V +  G    F 
Sbjct: 467 GKGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFA 526

Query: 288 W 288
           W
Sbjct: 527 W 527



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           F  I G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G 
Sbjct: 404 FSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQ 462

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           VYS+G G N  LGHG +     P+ ++
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLE 489



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3964

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3965 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4069



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 220
            P   L      +        N  + H E HD    E   + +Q   R+          D+
Sbjct: 3648 PRLFLDEVAKKIRELMADSENLDVLH-ESHDIFKREQDEQLVQWMNRRP---------DD 3697

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
              ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F +   
Sbjct: 3698 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTAD 3757

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 3758 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3814

Query: 339  FGFGDNERAQLGHDTLRGCLEPTEI 363
            + +G+ E  +LGH     C  P  I
Sbjct: 3815 YSWGEAEDGKLGHGNRSPCDRPRVI 3839



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
            F     E+ D+ +       R+K       ++G E    + +   V+ WG      LG  
Sbjct: 2677 FLASDNEEEDDEKANTGSLIRKK-------ASGLESAATIRTK--VFVWGLNDKDQLGGL 2727

Query: 244  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2728 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 2781

Query: 303  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 2782 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 2841

Query: 360  PTEI 363
            P  I
Sbjct: 2842 PRLI 2845



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V +T  G+++ 
Sbjct: 409 GQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYS 465

Query: 341 FGDNERAQLGHDT 353
           +G  +  +LGH T
Sbjct: 466 WGKGDNQRLGHGT 478



 Score = 38.1 bits (87), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           A F L  GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 122 GHVHTCGSNTHGQLGHG 138
           G V++ G   + +LGHG
Sbjct: 461 GQVYSWGKGDNQRLGHG 477


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 20/312 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++  ENHAA V + G+VF+ G+ SS   GH+  N  +  P+LVEAL  V  K V  G
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-INDSVSCPKLVEALASVHVKAVAFG 322

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 168
              T  +T+ G +       H  G L +    ++ +P K   P++ + SV +IA G  + 
Sbjct: 323 SKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSI-SVSKIACGEWHT 381

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G ++++G G+   LGHG++    +P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESL--KGLRVKSVACGPWHTAAVVEV 439

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    SG ++TWG    G LGH D+  K +P  +  L S+  +QV      T VL 
Sbjct: 440 TSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLT 499

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            TG V+  G    G LG P    +D      +  +L+   V +IS+G  H  V+T +G++
Sbjct: 500 STGVVFTIGSSKHGQLGNPH---ADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQV 556

Query: 339 FGFGDNERAQLG 350
           F +G     QLG
Sbjct: 557 FTWGKGADGQLG 568



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 19  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
           +S G+   G+L +  E  Q           +  V +++  E H A +  SGQ+FT GD +
Sbjct: 338 WSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGT 397

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL----------TIRGHVHTCG 128
               GH D  + I RP+ VE+LKG+  K V  G   T  +             G + T G
Sbjct: 398 FGVLGHGD-KQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWG 456

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
               G+LGH D   +  P  +  L      +Q++ G +  + +T  GVV++ GS  +  L
Sbjct: 457 DADRGKLGHADKKIKLVPTCVDLLTSY-DFLQVSCGAALTVVLTSTGVVFTIGSSKHGQL 515

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G+     E       T + +   V  +S+G  HV  L   G V+TWGKG  G LG GD  
Sbjct: 516 GNPHADGESICTVEGTLKNE--FVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYD 573

Query: 249 DKTLPEPLSSLK 260
           +++ P  + +L+
Sbjct: 574 NRSSPTLVEALQ 585



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 19/275 (6%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P   PRLV +   +  + +  G N    +T  G V + G+ +   LGH        PK +
Sbjct: 249 PKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLV 308

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTF-R 206
             L  V  V  +A G  +  AVT +G +  +  G++    L +  + ++  P  +  F  
Sbjct: 309 EALASV-HVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKL--FGP 365

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
              I V +++ G+ H   + SSG ++T+G G  G LGHGD+     P+ + SLK      
Sbjct: 366 MDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKS 425

Query: 267 VCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
           V      T  +V+          +G ++ +G    G LG  D+ +    L P  +D L +
Sbjct: 426 VACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIK---LVPTCVDLLTS 482

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +   Q+S G   TVV+T  G +F  G ++  QLG+
Sbjct: 483 YDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGN 517



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 19/242 (7%)

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           G +   + + +  P+ +A    +  V  IA G ++   VT  G V+S+G+ S+  LGH  
Sbjct: 240 GSMLDSEDIPKALPRLVASTTML-DVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQI 298

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
                 P+ ++      +HV  V+ G +H  A+  SG +  W +G    G L +  E ++
Sbjct: 299 NDSVSCPKLVEAL--ASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQ 356

Query: 251 TLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
             P  L      ++V ++   +  T ++  +G ++ +G   FG LG  D+     + RP+
Sbjct: 357 WSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDK---QGIARPK 413

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLE 359
            ++SL+   V  ++ G +HT  V +           G+LF +GD +R +LGH   +  L 
Sbjct: 414 EVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV 473

Query: 360 PT 361
           PT
Sbjct: 474 PT 475



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 143/349 (40%), Gaps = 32/349 (9%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I  G  H  +++    VFS G+     LGH  +    VS  + +   ++ HV  V+    
Sbjct: 267 IACGENHAAIVTKLGEVFSWGNESSRTLGH--QINDSVSCPKLVEALASVHVKAVAFGSK 324

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHR------DTNRPIFRP-RLVEALKGVPCKQVTAGLN 113
           H   V  SG++    + +     HR         R  + P +L   +  +   ++  G  
Sbjct: 325 HTCAVTVSGELLEWSEGA-----HRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEW 379

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T  +T  G + T G  T G LGHGD      PK +  L+ +  V  +A GP +  AV  
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGL-RVKSVACGPWHTAAVVE 438

Query: 174 ----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
                     +G ++++G      LGH ++  +L P  +          ++VS G    V
Sbjct: 439 VTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLL--TSYDFLQVSCGAALTV 496

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            L S+G V+T G    G LG+     +++     +LK+    ++ +      VL   G V
Sbjct: 497 VLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQV 556

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           + +G    G LG  D    D    P ++++L+  HV  I+ G   +  V
Sbjct: 557 FTWGKGADGQLGLGDY---DNRSSPTLVEALQGRHVQSIACGSNFSAAV 602


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 14/334 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     
Sbjct: 3251 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQVTALSSYVV 3308

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3309 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3367

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3425

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3426 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3485

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3486 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            GDN+  Q G+ T     +PT +   E ++ T +A
Sbjct: 3543 GDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVA 3576



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3279

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3280 ATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3339

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3340 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3398 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3454

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3455 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3500



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVADVAAGG 4359

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4360 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4418

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4419 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4476

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4477 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4536

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4537 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4573



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4346

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  V  +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4347 LRGI-EVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4465

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4466 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4523 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4551



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 52   VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 714  VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 762

Query: 112  LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
             +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 763  SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 167  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
            Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 823  YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 880

Query: 225  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 881  VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 940

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 941  SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997

Query: 345  ERAQLGHDTLRGCL-EPTEI 363
            ++ Q   DTLR    EPT +
Sbjct: 998  DQCQ-HFDTLRVTKPEPTAL 1016



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3375

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3551

Query: 244  HG 245
            +G
Sbjct: 3552 NG 3553



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       V  V+A   H
Sbjct: 4303 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVADVAAGGAH 4361

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4362 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4420

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4421 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4479

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4480 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4537

Query: 240  GALGHG 245
            G LG G
Sbjct: 4538 GQLGDG 4543



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4266

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4326

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+      V A    +  +   G +Y +G   +G LG  D
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4386

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4387 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4443

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4444 CKVPMKI 4450



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 4    TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
            + G ++  L +   V+S G    G LGHG   P     V  T     +  HVV ++    
Sbjct: 763  SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 823  YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 881

Query: 121  --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 882  TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 940

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 941  SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 997

Query: 239  CGALGHGDEIDKTLPEP 255
                 H D +  T PEP
Sbjct: 998  -DQCQHFDTLRVTKPEP 1013



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3365 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3423

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3424 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3482

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3483 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3541

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +     +G  + RV+ G  H VA
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGL--EGQKITRVACGSSHSVA 3584



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4411 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4469

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4470 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4528

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4529 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4574



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4201 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4260

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4261 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4344



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3278

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3279 EATNGRLGL---GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3336 DDGKLGHFSRMNCDKPRLI 3354


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3082

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGS 4211

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G  VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGA 4222

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAH 4107

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G +FT G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4108 SACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4166

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L ++G VV++  G  + +A+T +G VY+
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKVECGSQFSVALTKSGAVYT 4225

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 240  GALGHG 245
            G LG G
Sbjct: 4284 GQLGDG 4289



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 244  HG 245
            +G
Sbjct: 3295 NG 3296



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTDLGVVKVECGSQFSV 4215

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.4 bits (106), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 244  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 303  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3093

Query: 360  PTEI 363
            P  I
Sbjct: 3094 PRLI 3097


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4131

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4132 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4190

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4191 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4248

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4249 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4308

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4309 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4118

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4119 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4237

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4238 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4295 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4323



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4038

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4098

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4158

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4159 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4215

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4216 CKVPMKI 4222



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4075 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4133

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4134 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4192

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4193 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4251

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4252 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4309

Query: 240  GALGHG 245
            G LG G
Sbjct: 4310 GQLGDG 4315



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 679

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 736

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 737 -DQCQHFDTLRVTKPEP 752



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4241

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4242 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4300

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4301 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4346



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3973 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4032

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4033 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4116



 Score = 44.7 bits (104), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2628 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYMV 2685

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2686 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2744

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2802

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2803 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 2862

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2863 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2920 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2945



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2657 ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2716

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2717 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2774

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2775 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2831

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2832 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2877



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 3738

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3739 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3797

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3798 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL--TGLGVVKVECGSQFSVALTKSGA 3855

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3856 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3915

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3916 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + +SG+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 190

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK+I+    ++ G  VV IA G +
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 308

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 368

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 369 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 426 DQCQ-HFDTLR 435



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 3725

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3726 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGS 3844

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3845 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3902 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3930



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3645

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3705

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3706 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3765

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3766 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3822

Query: 357  CLEPTEI 363
            C  PT+I
Sbjct: 3823 CKVPTKI 3829



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG  +  C     I       VV V+A   H
Sbjct: 3682 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVIESLRGIEVVDVAAGGAH 3740

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 3741 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 3799

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3800 DDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3858

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3859 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3916

Query: 240  GALGHG 245
            G LG G
Sbjct: 3917 GQLGDG 3922



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2752

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2870

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2871 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2928

Query: 244  HG 245
            +G
Sbjct: 2929 NG 2930



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQ----AGKHVVHIA 246

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 247 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 305

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 306 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 364

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 422

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 423 GSN--DQCQHFDTLRVTKPEP 441



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 191

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 192 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTY 251

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 252 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 308

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 345



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2800

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2801 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2918

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2961



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C   T+I+  +   VV+V      + 
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGLGVVKVECGSQFSV 3848

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3849 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3907

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3908 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3953



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 419 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 464



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3580 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3639

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3640 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVI 3723



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2579 GSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2633

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2634 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPIPRQITALSSYMVKKVAV 2690

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2691 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2731


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 137/280 (48%), Gaps = 8/280 (2%)

Query: 91   IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
            I  P ++E L+ +  ++++  +G      LT    V + G    G+LGHGD L   TP+ 
Sbjct: 3843 IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRK 3902

Query: 149  IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
            I  L  +G  +V I+ G S+  A+T  G +Y++G G    LGHG+  D L+P+ ++  + 
Sbjct: 3903 IEAL--LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKS 3960

Query: 208  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
              +  V   +GD   +A+     V++WG G  G LG G       P  + SL      +V
Sbjct: 3961 YKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKV 4020

Query: 268  CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                + +  L   G +Y +G   +  LG    G +D V RPR +  L+   +  ++ G  
Sbjct: 4021 ECGSQFSVALTKNGDLYTWGKGDYYRLG---HGTNDHVRRPRKVACLQGKQIVTVAAGSL 4077

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            H V  TD G +F +GDN+  QLG+ TL    EPT + + E
Sbjct: 4078 HCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLE 4117



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 28/331 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           + Q+  S ++   +  +G+V++   N+  C            P L+++L  +  K++ A 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNAR-CEA----------PVLLDSLIDIKIKKIAAN 519

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
           +    +L +   G V++ GS   G+LGHGD   R  P+ +  L     + QIA G +Y  
Sbjct: 520 VEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKELVN-KKITQIACGSTYSA 576

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDS 227
           AVT NG +Y++G GS   LGHG   D L P  +      G HVV V+  +GD H +A+D 
Sbjct: 577 AVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGL--SGSHVVDVACGSGDAHTLAIDK 634

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQVCARKRKTFVLVDTGSVYG 285
            G V++WG G  G LG G      +P+ + +LK H    V V    + +  L   G+V+ 
Sbjct: 635 DGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWT 694

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG-DN 344
           +G      LG    G  D V  P++++ L  +H+  I+ G  H + +TD  ++F +G D 
Sbjct: 695 WGKSDGYRLG---HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDV 751

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           ++  L  D     +EPT I     E   G+A
Sbjct: 752 QKYALSSDNYN--MEPTCISAINKEFIAGVA 780



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 9/340 (2%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
            +S VF  G +  G LG G + ++  S T +   +A   V ++        V   G+V+  
Sbjct: 2868 DSRVFVWGLNDKGQLG-GCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVS 2926

Query: 75   GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTH 132
            G+ ++   G  +T   I  P  ++ L     K+VT   G   +  +T  G V + G    
Sbjct: 2927 GEGANGRLGLGNTEN-ISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 133  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            G+LGHGD   R +P  I  LE    +V+IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2986 GKLGHGDVTSRLSPTLIEALES-KLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD 3044

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P+ ++  +   +  +   + D   +AL  +  V++WG G  G LG G      +
Sbjct: 3045 SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI 3104

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P+ + +L      ++    + +  L  TG V+ +G   +  LG    G       P++++
Sbjct: 3105 PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLG---HGNDSHYRSPQLIE 3161

Query: 313  -SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              L+   +++I+ G  H + VTD G ++ +GDN+  Q G+
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGN 3201



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+  +L SN  VFS G    G LGHG + +   +  +I       +V +S   +H+A +
Sbjct: 3866 GRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRKIEALLGKQIVHISCGSSHSAAI 3924

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-- 123
               G+++T G       GH D +    +P+L+EALK      V  G      L I     
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGD-DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC 3983

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V + G   +G+LG G +     P  I  L  +G +V ++  G  + +A+T NG +Y++G 
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKPLRIESL--IGMAVCKVECGSQFSVALTKNGDLYTWGK 4041

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG      +PR +     +G  +V V+AG  H VA   +G V+TWG    G L
Sbjct: 4042 GDYYRLGHGTNDHVRRPRKVACL--QGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQL 4099

Query: 243  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G+G      +PEP           V   +      V  GS + F W
Sbjct: 4100 GNGTL--NPIPEP---------TLVTVLENVKLNRVGCGSAHSFAW 4134



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 12/249 (4%)

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            I   V   G N  GQLG   G  +  PT  K+IA L  V     IA G   +  VT +G 
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS----IAGGSKTVFIVTYDGK 2922

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY  G G+N  LG G   +   P  + T     +  V V  G  H + +   G V++WG+
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LGHGD   +  P  + +L+S L V++      +  +   G +Y +G   +G LG 
Sbjct: 2983 GIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGH 3042

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTL 354
             D   S  +  P+ + +L+ + V  I+ G     T+ +TD   ++ +GD +  +LG    
Sbjct: 3043 GD---SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGS 3099

Query: 355  RGCLEPTEI 363
             GC  P +I
Sbjct: 3100 EGCNIPQKI 3108



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 8/252 (3%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   +     VFS G  + G LGHG  T++ +S T I    +  +V+++   +H+A V
Sbjct: 2965 GRHSLCITREGKVFSWGEGIDGKLGHGDVTSR-LSPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
               G+++T G       GH D+ + +  P+ V+AL+      +  G     T  LT    
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDS-KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V + G    G+LG G +     P+ I  L   G  V +IA G  + LA++  G V+++G 
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGK 3140

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG       P+ I+   +K   +  ++ G  H +A+  +G VY+WG    G  
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKK-RITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199

Query: 243  GHGDEIDKTLPE 254
            G+G+      P+
Sbjct: 3200 GNGNTTVNKRPQ 3211



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 12/244 (4%)

Query: 125  HTCGSNTHGQLG--HGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            +  G N  GQLG   G  +  P    I A L        +A G   +  +T  G VY+ G
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTA----VAGGEQTLFILTSEGKVYASG 3828

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G +  LG G   + + P  I+  +   I  + V +G  H + L S+  V++WG G  G 
Sbjct: 3829 LGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGK 3888

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHGD++    P  + +L     V +      +  +   G +Y +G   +G LG  D   
Sbjct: 3889 LGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGD--- 3945

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             D  L+P++L++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC +
Sbjct: 3946 GDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKK 4005

Query: 360  PTEI 363
            P  I
Sbjct: 4006 PLRI 4009



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 19/238 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           G ++  L S+  V+S GS   G LGHG     PE  + +   +I         Q++    
Sbjct: 522 GEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKI--------TQIACGST 573

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A V  +G+++T G  S    GH ++   +  P LV  L G     V  G      L I
Sbjct: 574 YSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL-PTLVAGLSGSHVVDVACGSGDAHTLAI 632

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVV 177
              G V + G   +G+LG G +     PK +  L+     +V +  G  + +A+  +G V
Sbjct: 633 DKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTV 692

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           +++G    + LGHG       P+ ++       H+V ++ G  H +AL  +  ++TWG
Sbjct: 693 WTWGKSDGYRLGHGTLDHVRYPKMVEGL--INYHIVDIAVGPSHCLALTDNCQIFTWG 748



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 5    TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL I++   V+S G    G LG G  +  C    RI       V +V      + 
Sbjct: 3970 SGDAQTLAITDDDCVWSWGDGDYGKLGRGG-SDGCKKPLRIESLIGMAVCKVECGSQFSV 4028

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + ++G ++T G    +  GH  TN  + RPR V  L+G     V AG       T  G 
Sbjct: 4029 ALTKNGDLYTWGKGDYYRLGH-GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGE 4087

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 155
            V T G N  GQLG+G     P P  +  LE V
Sbjct: 4088 VFTWGDNDEGQLGNGTLNPIPEPTLVTVLENV 4119


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1295 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1413

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1414 SHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL--GHRVVQVACGSRDAQTL 1471

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1472 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 1531

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 1532 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 1588

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 1589 NDHGQQGNGTTTVNRKPT--LVQGLE 1612



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 9/262 (3%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 152
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTAL 1347

Query: 153  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 1348 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 1407

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 269
               ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  VQV   +
Sbjct: 1408 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGS 1465

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
            R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 1522

Query: 330  VVVTDRGRLFGFGDNERAQLGH 351
            + +T  G ++ +G  +  +LGH
Sbjct: 1523 LALTKSGVVWTWGKGDYFRLGH 1544



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 2408

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVGIACGSGDAQTLC 2467

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VVRV  G +  VAL  +G 
Sbjct: 2468 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVRVECGSQFSVALTKAGA 2525

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+   A+ +           + G VY +G   
Sbjct: 2526 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 2586 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 2291 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 2349

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  G V++ G    G+LGHG       P+ I  L  +  VV +AAG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGI-EVVDVAAGG 2408

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     V+V    + +  L   G+VY 
Sbjct: 2469 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYT 2528

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR +  L+      I+TG  H V  T+ G ++ +GDN+
Sbjct: 2529 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 2586 EGQLGDGTTNAIQRP 2600



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1361 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH DT   + +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1420 TSSGELYTWGLGEYGRLGHGDTTTQL-KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL 1478

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1479 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 1537

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 1538 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 1595

Query: 244  HG 245
            +G
Sbjct: 1596 NG 1597



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 2315

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2375

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2435

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2436 ---SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2492

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 2493 CKVPMKI 2499



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG  +  C     I       VV V+A   H
Sbjct: 2352 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVIESLRGIEVVDVAAGGAH 2410

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQVTAGLNFTG 116
            +A V  +G ++T G       GH D+   + +P+LVEAL+     G+ C    +G   T 
Sbjct: 2411 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVGIACG---SGDAQTL 2466

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T  G 
Sbjct: 2467 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVRVECGSQFSVALTKAGA 2525

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +PR +Q    +G   + ++ G  H V     G VYTWG 
Sbjct: 2526 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKAIAIATGSLHCVCCTEDGEVYTWGD 2583

Query: 237  GYCGALGHG 245
               G LG G
Sbjct: 2584 NDEGQLGDG 2592



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 167  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            + L+  G+G +Y +G      LG  E      P   +      +  V++  G++ + A+ 
Sbjct: 2252 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEAL--AALRPVQLIGGEQTLFAVT 2309

Query: 227  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 284
            + G +Y  G G  G LG G     + P  L S++     +V      +    L   G VY
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 285  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             +G    G LG   R   D   RPR+++SLR   V  ++ G  H+  VT  G L+ +G  
Sbjct: 2370 SWGEAEDGKLGHGSRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 345  ERAQLGHDTLRGCLEP 360
               +LGH      L+P
Sbjct: 2427 RYGRLGHSDSEDQLKP 2442



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2250 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 2309

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2310 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVI 2393



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2460 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVRVECGSQFSV 2518

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + ++G V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2519 ALTKAGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 2623



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILD 312
            E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR + 
Sbjct: 1292 ETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPLPRQVT 1345

Query: 313  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 1346 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1398


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2968 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3025

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3026 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3084

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3142

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3143 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3202

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3203 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3260 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3285



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2996

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2997 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3056

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3057 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3115 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3171

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3172 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3217



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4067

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4068 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4186

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4187 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4244 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4272



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4080

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4081 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4139

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4140 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4197

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4198 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4257

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4258 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 479

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 597

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 657

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 658 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 715 DQCQ-HFDTLR 724



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4024 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4082

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4083 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4141

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4142 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4200

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4201 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4258

Query: 240  GALGHG 245
            G LG G
Sbjct: 4259 GQLGDG 4264



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3987

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4047

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4107

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4108 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4164

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4165 CKVPMKI 4171



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3092

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3210

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3211 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3268

Query: 244  HG 245
            +G
Sbjct: 3269 NG 3270



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 598

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 599 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 657

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 658 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 714

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 715 -DQCQHFDTLRVTKPEP 730



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 480

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 481 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 540

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 541 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 597

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 634



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3140

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3141 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3258

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3301



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4190

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4191 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4249

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4250 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4295



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 708 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 753



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3922 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3981

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3982 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4065



 Score = 44.7 bits (104), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2919 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2973

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2974 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3030

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3031 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3071


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2799

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3033

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2830

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3852

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3853 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3911

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3912 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3969

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4030 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3780 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3839

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3840 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3958

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3959 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4016 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4044



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     V ++G+V T   NS       DT      P+LV+ L      ++ A 
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------DT----LVPQLVQGLASRNVVKIAAH 478

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G     +LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 596

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 656

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   +LAVT +G +Y
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLLAVTADGKLY 3759

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3819

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3820 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3879

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3880 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3936

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3937 CKVPMKI 3943



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2866

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2985 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3042

Query: 244  HG 245
            +G
Sbjct: 3043 NG 3044



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G      LGHG   P     V        +  HVV ++    
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 597

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 598 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 656

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 657 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 713

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 714 -DQCQHFDTLRVTKPEP 729



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA     +L V  NG V +    S          D L P+ +Q    + +  +   +
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS----------DTLVPQLVQGLASRNVVKIAAHS 479

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G    LGHGD +    P+ +S+     A    V +      
Sbjct: 480 DGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 539

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 596

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 113/281 (40%), Gaps = 60/281 (21%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3796 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3854

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG------------------- 102
            +A V  +G ++T G       GH D+   + +P+LVEAL+G                   
Sbjct: 3855 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 3913

Query: 103  -------------------------VPCK----------QVTAGLNFTGFLTIRGHVHTC 127
                                     VP K          +V  G  F+  LT  G V+T 
Sbjct: 3914 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTW 3973

Query: 128  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
            G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G      
Sbjct: 3974 GKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4032

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 4033 LGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 4071



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3032

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 647

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 648 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 166
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 707 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPA 748



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++    + 
Sbjct: 3694 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT 3753

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3754 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3837



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2693 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2747

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2748 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2804

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2805 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2845


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4102

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4161

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGT-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4148

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             ++ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAAGGAH 4104

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4163

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4280

Query: 240  GALGHG 245
            G LG G
Sbjct: 4281 GQLGDG 4286



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4271

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4003

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + R +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRRKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4105

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4106 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4164

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4223

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 240  GALGHG 245
            G LG G
Sbjct: 4282 GQLGDG 4287



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4105

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4106 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4164

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4223

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 240  GALGHG 245
            G LG G
Sbjct: 4282 GQLGDG 4287



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2993 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3050

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     +  IA 
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR-AKRIRDIAC 3109

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3167

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3168 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3227

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3228 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3285 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3310



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3022 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3081

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  R K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3140 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3196

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3197 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH  +  P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDVACGSGDAQTLC 4163

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG       P+ +  
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES 4091

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4092 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGS 4210

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4268 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4296



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  PR+L+ L    V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRAKRIRDIACGSSHSAAL 3117

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3235

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3236 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3293

Query: 244  HG 245
            +G
Sbjct: 3294 NG 3295



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG  +  C     +       VV V+A   H
Sbjct: 4048 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVVESLRGIEVVDVAAGGAH 4106

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVE L+G     V   +G   T  LT
Sbjct: 4107 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDVACGSGDAQTLCLT 4165

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4166 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVKVECGSQFSVALTKSGAVYT 4224

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 240  GALGHG 245
            G LG G
Sbjct: 4283 GQLGDG 4288



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P++++ L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVS 56
           + G ++  L +   VFS G    G LGHG      V        SA        HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHG----DTVPLEEPKVISAFSGKQGGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-EVVKVRCGSQFSVALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     PR ++     G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 22/220 (10%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 272
              H +AL ++G V++WG G  G LGHGD +    P+ +S+        H+    C    
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 330
              +  + G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+
Sbjct: 564 SAAITAE-GELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 369
            VT+ G+++ +GD +  +LG     GC  P  I  +Q++E
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLE 659



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3165

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3166 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3224

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3225 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3283

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3326



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  PRL+E L G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I   +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 5/144 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3946 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4005

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4006 ADGKLYA---TGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 337  RLFGFGDNERAQLGHDTLRGCLEP 360
             ++ +G+ E  +LGH +   C  P
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRP 4086



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + SAG E   A+ +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2944 GSLIRKKSAGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2998

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2999 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAV 3055

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3056 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3096


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4103

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGT-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             ++ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAAGGAH 4105

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4106 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4164

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4223

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4281

Query: 240  GALGHG 245
            G LG G
Sbjct: 4282 GQLGDG 4287



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4272

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4004

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2985 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3042

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3043 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3101

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3159

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3160 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3219

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3220 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3277 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3302



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3013

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3014 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3073

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3074 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3132 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3188

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3189 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3234



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4095

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4096 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4154

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4155 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4212

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4213 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4272

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4273 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4082

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4083 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4201

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4202 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4259 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4287



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4002

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4062

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4122

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4123 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4179

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4180 CKVPMKI 4186



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4039 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4097

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4098 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4156

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4157 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4215

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4216 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4273

Query: 240  GALGHG 245
            G LG G
Sbjct: 4274 GQLGDG 4279



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3109

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3227

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3228 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3285

Query: 244  HG 245
            +G
Sbjct: 3286 NG 3287



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 679

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 736

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 737 -DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3157

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3158 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3275

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3318



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4205

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4206 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4264

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4265 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4310



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3937 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3996

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3997 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4080



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2936 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2990

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2991 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3047

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3048 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3088


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2989 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3046

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3105

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3163

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3164 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3223

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3224 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3281 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3306



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3017

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3018 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3077

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3078 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3136 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3192

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3193 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3238



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4101

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4160

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4161 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4218

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4219 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4279 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3984 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4042

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4101

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4162 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4221

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4222 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 346  RAQLGHDTLRGCLEP 360
              QLG  T      P
Sbjct: 4279 EGQLGDGTTNAIQRP 4293



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4045 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAAGGAH 4103

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4104 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 4162

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4163 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4221

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4222 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4279

Query: 240  GALGHG 245
            G LG G
Sbjct: 4280 GQLGDG 4285



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4008

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4068

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4128

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4129 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4185

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4186 CKVPMKI 4192



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3113

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3231

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3232 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3289

Query: 244  HG 245
            +G
Sbjct: 3290 NG 3291



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3161

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3162 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3279

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3322



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4211

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4212 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4270

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4271 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4316



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3943 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4002

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4003 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4086



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2940 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2994

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2995 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3051

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3052 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3092


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 9/311 (2%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           ++++  A  + + +   +H   +   G++++CG+N     GH   + P  RP+L+ AL+ 
Sbjct: 340 KMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN 399

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 161
               Q   G   +  LT  G V++ GSN  GQLG   DT  +  P+ I  +     VVQI
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI-AAKQVVQI 458

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 220
           AAG  + LA+T +G +Y++GS +   LG G  ++++  P  +Q+    G+ +  ++ G  
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL--AGVPIAFIACGGN 516

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  A+  SG ++ WGK   G LG  D   +  P  L +L+S     V      +  L   
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAG 576

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+  G   FG LG    G  +  + PR++  L    ++QI+ G  HT+  V  RG+++
Sbjct: 577 GGVFTCGAGTFGQLG---HGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633

Query: 340 GFGDNERAQLG 350
           GFG +   QLG
Sbjct: 634 GFGLSGVGQLG 644



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 152/323 (47%), Gaps = 14/323 (4%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HTLL++N   ++SCG++  G LGH  E+        +       + Q      H+  
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLA 414

Query: 65  VLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           +   GQV++ G N+    G   DT R I  PRL+ ++      Q+ AG      LT  G 
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473

Query: 124 VHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           ++  GSN +GQLG G T ++  TP  +  L  V  +  IA G ++  AV+ +G ++ +G 
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV-PIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            +   LG  + +    P  ++T R  G+    VS GD+  V L + G V+T G G  G L
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRY--VSCGDDFSVFLTAGGGVFTCGAGTFGQL 590

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGV 301
           GHG   ++ LP  +  L      Q+   +R T   V + G +YGFG  G G LG    G+
Sbjct: 591 GHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGI---GI 647

Query: 302 SDKVLRPRILDSLRAHHVSQIST 324
                 P+I   +R    SQI T
Sbjct: 648 VGNYNTPQI---VRGPWQSQILT 667



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 9/277 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSI 149
           +  PR ++ +      +   G + T  LT  G +++CG+N HGQLGH  ++L    P+ +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRK 208
             LE    + Q   G ++ LA+T  G VYS+GS +   LG   +   ++ PR I++   K
Sbjct: 395 TALENY-IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQV 267
              VV+++AG  H +AL +SG +Y WG    G LG G   +K + P  + SL       +
Sbjct: 454 --QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFI 511

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                 +F +  +G+++G+G   FG LG  D         P  L +LR+  V  +S G  
Sbjct: 512 ACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ---FPTQLRTLRSLGVRYVSCGDD 568

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            +V +T  G +F  G     QLGH +    + P  +F
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF 605



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 5/246 (2%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H+L ++N   V+S GS+  G LG   +TT+ +    I   +A  VVQ++A   
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +  SG+++  G N+    G   TN  +  P LV++L GVP   +  G N +  ++ 
Sbjct: 464 HCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G NT GQLG  D   R  P  +  L  +G V  ++ G  + + +T  G V++ 
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLTAGGGVFTC 582

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G+   LGHG  ++E+ PR +  F   G  + +++ G  H +A + S G +Y +G    
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640

Query: 240 GALGHG 245
           G LG G
Sbjct: 641 GQLGIG 646



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH L ++NS  +++ GS+  G LG G    +  + T +   +   +  ++   
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGG 515

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V +SG +F  G N+    G  D N   F P  +  L+ +  + V+ G +F+ FLT
Sbjct: 516 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQF-PTQLRTLRSLGVRYVSCGDDFSVFLT 574

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 575 AGGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 632

Query: 178 YSFG 181
           Y FG
Sbjct: 633 YGFG 636


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4147

Query: 212  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 330  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4265 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4162

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4105

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4106 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHHVVDVACGSGDAQTLCLT 4164

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4223

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 240  GALGHG 245
            G LG G
Sbjct: 4282 GQLGDG 4287



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2279 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2336

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2337 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2395

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2453

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2454 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2513

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2514 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2571 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2596



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2307

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2308 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2367

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2368 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2426 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2482

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2483 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2528



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3389

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3390 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3448

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3449 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3506

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3507 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3566

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3567 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3376

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3377 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3495

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3496 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3553 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3581



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3296

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3356

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3416

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3417 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3473

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3474 CKVPMKI 3480



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3333 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3391

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 3392 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 3450

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3451 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3509

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3510 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3567

Query: 240  GALGHG 245
            G LG G
Sbjct: 3568 GQLGDG 3573



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2345 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2403

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2404 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2521

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2522 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2579

Query: 244  HG 245
            +G
Sbjct: 2580 NG 2581



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2451

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2452 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2569

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2612



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3499

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3500 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3558

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3559 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3604



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3231 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3290

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3291 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3374



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2306

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2307 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 2364 DDGKLGHFSRMNCDKPRLI 2382


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 679

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 736

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 737 -DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2998 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3055

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3056 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3114

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3172

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3173 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3232

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3233 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3290 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3315



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3026

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3027 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3086

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3087 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3145 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3201

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3202 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3247



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4097

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4098 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4154

Query: 212  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4214

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4271

Query: 330  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4272 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4302



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4110

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4111 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4169

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4170 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4227

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4228 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4287

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4288 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4017

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4077

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4137

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4194

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4195 CKVPMKI 4201



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4054 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4112

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 4113 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHHVVDVACGSGDAQTLCLT 4171

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4172 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4230

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4231 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4288

Query: 240  GALGHG 245
            G LG G
Sbjct: 4289 GQLGDG 4294



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3122

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3240

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3241 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3298

Query: 244  HG 245
            +G
Sbjct: 3299 NG 3300



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLRVTKPEP 753



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3170

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3171 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3288

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3331



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4162 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4220

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4221 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4279

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4280 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4325



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3952 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4011

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4012 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4095



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2949 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 3003

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 3004 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3060

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3061 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3101


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2995 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3052

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3053 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3111

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3169

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3170 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3229

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3230 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3286

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3287 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3312



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3023

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3024 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3083

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3084 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3142 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3198

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3199 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3244



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4106 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4164

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 447

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 625

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4132

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4133 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4107

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4108 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4166

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4225

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 240  GALGHG 245
            G LG G
Sbjct: 4284 GQLGDG 4289



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3119

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3237

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3238 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3295

Query: 244  HG 245
            +G
Sbjct: 3296 NG 3297



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 566

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 567 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 625

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 682

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 683 -DQCQHFDTLRVTKPEP 698



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 448

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 565

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 602



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3167

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3168 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3226

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3227 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3285

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3328



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4320



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 721



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2946 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 3000

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 3001 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3057

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3058 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3098


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2983 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3040

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3041 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3099

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3157

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3158 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3217

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3218 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3274

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3275 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3300



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3011

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3012 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3071

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3072 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3130 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3186

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3187 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3232



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4042

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4043 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4101

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4102 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4159

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4160 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4220 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4256



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4030 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4148

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4149 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4206 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4234



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4044

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4045 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4103

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4104 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4162

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4220

Query: 240  GALGHG 245
            G LG G
Sbjct: 4221 GQLGDG 4226



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3107

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3225

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3226 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3283

Query: 244  HG 245
            +G
Sbjct: 3284 NG 3285



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 5/167 (2%)

Query: 199  PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
            P  +++ +   I  V V++G +H +AL S G VY+WG+   G LGHG+      P  + S
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 259  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
            L+    V V A    +  +   G +Y +G   +G LG  D   S+  L+P+++++L+ H 
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---SEDQLKPKLVEALQGHR 4086

Query: 319  VSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +I
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3155

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3156 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3214

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3215 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3273

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3316



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2934 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2988

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2989 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3045

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3046 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3086


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 CHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2686 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2743

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2744 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2802

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2860

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2861 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2920

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2921 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2978 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3003



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2714

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2715 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2774

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2775 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2833 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2889

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2890 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2935



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3796

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3797 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3855

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3856 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3913

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3914 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3973

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3974 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3783

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3784 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3902

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3903 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3960 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3988



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3703

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3763

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3823

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3824 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3880

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3881 CKVPMKI 3887



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3740 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3798

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 3799 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 3857

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3858 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3916

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3917 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3974

Query: 240  GALGHG 245
            G LG G
Sbjct: 3975 GQLGDG 3980



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2810

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2928

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2929 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2986

Query: 244  HG 245
            +G
Sbjct: 2987 NG 2988



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P   E L  +   Q+         L+  G V+T   N+       DTL    P+ + 
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-------DTL---APQLVQ 443

Query: 151 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 206
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 444 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + 
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 562

Query: 267 V 267
           V
Sbjct: 563 V 563



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 456

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 457 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 516

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 574

Query: 225 L 225
           +
Sbjct: 575 V 575



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2858

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2859 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2976

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3019



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3906

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3907 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3965

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3966 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4011



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3638 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3697

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3698 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3781



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2637 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2691

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2692 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2748

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2749 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2789


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2930 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYMV 2987

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2988 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3046

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3104

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3105 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 3164

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3165 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3222 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3247



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2958

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2959 ATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3018

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3019 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3076

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3077 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3133

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3134 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3179



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+GV    V AG 
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGVEVVDVAAGG 4040

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4041 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4099

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4100 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4157

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4158 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4217

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4218 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 4027

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  V  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4028 LRGV-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4146

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4147 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4204 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4232



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG  +  C     I       VV V+A   H
Sbjct: 3984 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVIESLRGVEVVDVAAGGAH 4042

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4043 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4101

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4102 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4160

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4161 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4218

Query: 240  GALGHG 245
            G LG G
Sbjct: 4219 GQLGDG 4224



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3947

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4007

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4067

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4124

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4125 CKVPMKI 4131



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3054

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3172

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3173 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3230

Query: 244  HG 245
            +G
Sbjct: 3231 NG 3232



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 28/313 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 432

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 492

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHV---VRVSAGDEHV 222
           Y  A+T  G +Y++G G+   L HG    +E+        R+K I+    +R +      
Sbjct: 493 YSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFA----QT 548

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +A   +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G 
Sbjct: 549 LAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 608

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           VY +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G
Sbjct: 609 VYSWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665

Query: 343 DNERAQLGHDTLR 355
            N++ Q   DTLR
Sbjct: 666 SNDQCQ-HFDTLR 677



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 13/258 (5%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 492

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           ++A +   G+++T G  +     H R     I    ++  L        + G+ F   L 
Sbjct: 493 YSAAITAEGELYTWGRGNYXRLDHGRSAMNEIL--IMISGLDRQKFIYKSCGIRFAQTLA 550

Query: 120 I--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
               G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G V
Sbjct: 551 FYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQV 609

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           YS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG  
Sbjct: 610 YSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN 667

Query: 238 YCGALGHGDEIDKTLPEP 255
                 H D +  T PEP
Sbjct: 668 --DQCQHFDTLRVTKPEP 683



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 48  SAAHVVQVSA-SENHAAFVLQS-GQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           ++ ++V+++A S+ H    L + G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 478

Query: 104 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
              +    +  G  ++  +T  G ++T G   + +L HG +        I+ L+    + 
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIY 538

Query: 160 QIAAGPSYM--LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + + G  +   LA   NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 539 K-SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 595

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+    + V A       L
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655

Query: 278 VDTGSVYGFG 287
            +   V+ +G
Sbjct: 656 TEDSEVHSWG 665



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3102

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3103 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3263



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4150

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4151 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4209

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4210 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4255



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3882 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3941

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3942 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVI 4025



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
           N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV++ 
Sbjct: 554 NGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           G   +   GH  T   +  P+L+E L+G     V AG      LT    VH+ GSN   Q
Sbjct: 613 GKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671

Query: 135 LGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 672 --HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 706



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2881 GSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2935

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2936 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYMVKKVAV 2992

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2993 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3033


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2215 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2272

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2273 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2331

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2389

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2390 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2449

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2450 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2507 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2532



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2244 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2303

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2304 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2362 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2418

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2419 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2464



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3327

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG-HRVVDVACGSGDAQTLC 3386

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3387 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3444

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + GS Y +G   
Sbjct: 3445 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDND 3503

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3504 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 7/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3255 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3314

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ +   +   + 
Sbjct: 3315 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVV 3373

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3374 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3433

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3434 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3490

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G  + +GDN+  QLG  T      P
Sbjct: 3491 CTEDGS-YTWGDNDEGQLGDGTTNAIQRP 3518



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3234

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3294

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3354

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3355 ---SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3411

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3412 CKVPMKI 3418



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2281 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 2339

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2340 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2457

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2458 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2515

Query: 244  HG 245
            +G
Sbjct: 2516 NG 2517



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 9/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3271 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3329

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LV+AL+G     V   +G   T  LT
Sbjct: 3330 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVDALQGHRVVDVACGSGDAQTLCLT 3388

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3389 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3447

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G  YTWG    
Sbjct: 3448 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGS-YTWGDNDE 3504

Query: 240  GALGHG 245
            G LG G
Sbjct: 3505 GQLGDG 3510



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2387

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2388 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2505

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2548



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 220
            P   L      +      G N  + H E HD    E   + +Q   R+          D+
Sbjct: 3121 PRLFLDEVAKKIRELMADGENMDVLH-ESHDIFRREQDEQLVQWMNRRP---------DD 3170

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3171 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD 3230

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 3231 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 339  FGFGDNERAQLGHDTLRGCLEPTEI 363
            + +G+ E  +LGH     C  P  I
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVI 3312



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3437

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3438 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS 3496

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             +T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3497 -YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3541



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2242

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2243 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 2300 DDGKLGHFSRMNCDKPRLI 2318


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H    + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +    V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 240  GALGHG 245
            G LG G
Sbjct: 4279 GQLGDG 4284



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 244  HG 245
            +G
Sbjct: 3291 NG 3292



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 161/350 (46%), Gaps = 31/350 (8%)

Query: 27  GVLGHGPETTQCVSFTRIN--FPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNS 78
           G++G G       S T+I+   P A        V  ++    HA  V + G+VF+ G+  
Sbjct: 261 GIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLG 136
               GH      +  P+L++AL G+  + V  G   +  +T+ G ++T G  TH  G LG
Sbjct: 321 GSRLGH-GVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLG 379

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           HG       PK ++   E   V  +A GP +   VT  G +++FG G+   LGHG+    
Sbjct: 380 HGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSM 439

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL---------------DSSGYVYTWGKGYCGA 241
             PR ++  R  G   +RV+ G  H  A+                SSG ++TWG G  G 
Sbjct: 440 SIPREVEALR--GQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGR 497

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHGD+  + +P+ +++L +    QV      +  L  +G VY  G   +G LG P   V
Sbjct: 498 LGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSP---V 554

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +D  +   +   +    V +++ G YH  V+T +  ++ +G     QLGH
Sbjct: 555 ADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGH 604



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S     +  G+   G+LGHG E +  +   +++ P    HV  V+  
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIP-KKVSGPMEGMHVSYVACG 407

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D +  +  PR VEAL+G    +V  G+  T  +
Sbjct: 408 PWHTAVVTSAGQLFTFGDGTFGALGHGD-HSSMSIPREVEALRGQRTMRVACGVWHTAAV 466

Query: 119 T---------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
                             G + T G    G+LGHGD   R  P+S+  L    S  Q+A 
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALIN-ESFCQVAC 525

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           G +  +A+T +G VY+ GS     LG     G+    ++ +   +F      V  V+ G 
Sbjct: 526 GHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSF------VEEVACGS 579

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 580 YHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLK 620



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 32/259 (12%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           VH  GS++  ++      D   PK++     V  V  IA G  + + VT  G V+S+G  
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTV-VLDVHSIACGGKHAVLVTKKGEVFSWGEE 319

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGA 241
               LGHG + D   P+ I      G+++  V+ G+ H  A+  SG +YTWG G    G 
Sbjct: 320 CGSRLGHGVEVDVSHPKLIDAL--CGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGL 377

Query: 242 LGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           LGHG E    +P+ +S      H++   C     T V+   G ++ FG   FG+LG  D 
Sbjct: 378 LGHGSEASHWIPKKVSGPMEGMHVSYVACG-PWHTAVVTSAGQLFTFGDGTFGALGHGDH 436

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD---------------RGRLFGFGDN 344
                +  PR +++LR     +++ G++HT  V +                G+LF +GD 
Sbjct: 437 S---SMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG 493

Query: 345 ERAQLGHDTLRGCLEPTEI 363
           ++ +LGH      L P  +
Sbjct: 494 DKGRLGHGDKEPRLVPQSV 512



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 143/347 (41%), Gaps = 28/347 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+     VFS G      LGHG E    VS  + I+     ++  V+  E H+  
Sbjct: 301 GKHAVLVTKKGEVFSWGEECGSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYHSCA 358

Query: 65  VLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
           V  SG ++T GD  ++S   GH          ++   ++G+    V  G   T  +T  G
Sbjct: 359 VTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAG 418

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQ--IAAGPSYM 168
            + T G  T G LGHGD      P+ +  L                +VV+  IA+     
Sbjct: 419 QLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFES 478

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
              + +G ++++G G    LGHG++   L P+++     +     +V+ G    VAL +S
Sbjct: 479 SGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESF--CQVACGHNLSVALTTS 536

Query: 229 GYVYTWGKGYCGALGH--GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           G VYT G    G LG    D    TL E    + +    +V        VL     VY +
Sbjct: 537 GRVYTMGSAVYGQLGSPVADGKIPTLVE--GKIANSFVEEVACGSYHVAVLTSKTEVYTW 594

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G    G LG  D   +D    P ++D L+   V  +  GL  T  ++
Sbjct: 595 GKGTNGQLGHGD---NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G +HT +++++  +F+ G    G LGHG  ++  +    +        ++V+    H
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIP-REVEALRGQRTMRVACGVWH 462

Query: 62  AAFVLQ---------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            A V++               SG++FT GD      GH D   P   P+ V AL      
Sbjct: 463 TAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGD-KEPRLVPQSVTALINESFC 521

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV  G N +  LT  G V+T GS  +GQLG     D   P  +        V ++A G  
Sbjct: 522 QVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++  +T    VY++G G+N  LGHG+      P  +   + K +  V
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L ++  V++ GS++ G LG      +  +       ++  V +V+    H A +    +V
Sbjct: 533 LTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANS-FVEEVACGSYHVAVLTSKTEV 591

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV----HTC 127
           +T G  ++   GH D N     P LV+ LK    K V  GLNFT  +++   V    H+ 
Sbjct: 592 YTWGKGTNGQLGHGD-NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSI 650

Query: 128 GSNTHGQLG 136
            S  H Q G
Sbjct: 651 CSGCHNQFG 659


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V  ++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 22/330 (6%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G  
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACGEY 326

Query: 114 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 170
            T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 327 HTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHSAL 385

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
            T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+     
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEVMS 443

Query: 226 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
                 SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L  +
Sbjct: 444 QSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTS 503

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +F 
Sbjct: 504 GHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFT 560

Query: 341 FGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           +G     +LGH        PT  F++ +++
Sbjct: 561 WGRGANGRLGHGDTEDRRSPT--FVEALKD 588



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 374 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACG 431

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH  +      P  V AL      Q+
Sbjct: 432 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 490

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 491 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 548

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 549 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 594


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 CHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 CHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 24/316 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 110
           V  ++    HAA V + G+VF+ G  S    GH  D++ P   P+L+E+L     + V  
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 364

Query: 111 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 167
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 423

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 225
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 481

Query: 226 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 482 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTV 541

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            L   G VY  G   +G LG      +D  L   +   L    V +I+ G YH  V+T R
Sbjct: 542 ALSRLGHVYTMGSCVYGHLG---NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSR 598

Query: 336 GRLFGFGDNERAQLGH 351
             +F +G      LGH
Sbjct: 599 TEVFTWGKGANGCLGH 614



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+N P    HV  +S  
Sbjct: 362 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-KRVNGPLEGIHVSSISCG 420

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  SGQ+FT GD +    GH D  + +  PR +E+LKG+   Q   G+  T  +
Sbjct: 421 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSLPREIESLKGLRTVQAACGVWHTAAV 479

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +  L+E  +  Q+A G S
Sbjct: 480 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP-NFCQVACGHS 538

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A++  G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 539 MTVALSRLGHVYTMGSCVYGHLGN-TQADGKLPTPVEGKLSKSF-VEEIACGAYHVAVLT 596

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 597 SRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALK 630



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 356 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 413

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  +S G  H   + SSG ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 414 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGV 473

Query: 272 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 474 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESKLVPTRVVTLDEPNF 530

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
            Q++ G   TV ++  G ++  G      LG+    G L PT +       F++E+
Sbjct: 531 CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKL-PTPVEGKLSKSFVEEI 585



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R I        VQ +    
Sbjct: 417 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSLPREIESLKGLRTVQAACGVW 474

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D    +   R+V   +   C QV
Sbjct: 475 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFC-QV 533

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G + T  L+  GHV+T GS  +G LG+    D   P  +        V +IA G  ++
Sbjct: 534 ACGHSMTVALSRLGHVYTMGSCVYGHLGNTQA-DGKLPTPVEGKLSKSFVEEIACGAYHV 592

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    V+++G G+N CLGHG+ +D   P  ++  + K +  +
Sbjct: 593 AVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSI 637



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ +S    V++ GS + G LG+     +  +       S + V +++    
Sbjct: 532 QVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKL-SKSFVEEIACGAY 590

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +VFT G  ++ C GH DTN     P LVEALK    K +  G NFT  + +
Sbjct: 591 HVAVLTSRTEVFTWGKGANGCLGHGDTN-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 649

Query: 121 RGHV 124
              V
Sbjct: 650 HKWV 653


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3018

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G +  LGHG +    +P+ +++ R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3019 GEGEDGKLGHGNRVTLEKPKLLESLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3076

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3077 RLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3133

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3134 RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVR 3193

Query: 359  EPTEI 363
            +PT I
Sbjct: 3194 KPTPI 3198



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 20/312 (6%)

Query: 40  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
           S   I  P +  V QV+ +EN    V  SGQ+++     S C            P+LVE 
Sbjct: 524 STATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---HSSCA-------ETVAPKLVEG 573

Query: 100 LKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
           L+GV   Q+ A         L+  G V++ G+   G+LGHGDT  +  P  IA LE+   
Sbjct: 574 LEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA-LEK--Q 630

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I AG SY  AV+  G ++++G G+   LGHG   D+  P  +Q  +   +  V + +
Sbjct: 631 VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGS 690

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           GD H +A+   G ++ WG G  G LG+G      LP  +  + S    ++ +  + +  L
Sbjct: 691 GDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSS--VARIYSGSQFSVAL 748

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G++Y +G    G LG    G S+    P+++ +L    +  ++ G  H + +T  G 
Sbjct: 749 SYDGTLYSWGKGHGGRLG---HGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805

Query: 338 LFGFGDNERAQL 349
           L+G+G N+  Q+
Sbjct: 806 LYGWGRNDYQQI 817



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 21/321 (6%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 93
            +++  P+ + V      + +S        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2926 SKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2982

Query: 94   PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ +    PK +  
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLES 3042

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +     +G  
Sbjct: 3043 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTAL--QGHR 3099

Query: 212  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L     VQ+  
Sbjct: 3100 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIEC 3159

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3216

Query: 330  VVVTDRGRLFGFGDNERAQLG 350
            + VTD G++F +GDN+  Q G
Sbjct: 3217 LAVTDSGQVFAWGDNDHGQQG 3237



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 40/324 (12%)

Query: 71   VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 190  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
            HG +    +P+ I+     GI VV ++ G  H   + S G+V TWGKG  G LGHGD  D
Sbjct: 4065 HGNRDSYDRPKLIEAL--SGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122

Query: 250  KTLPEP------------LSSLKSHLAVQVCARKRK---------------------TFV 276
            +  P+             ++++ + LA +V    R                      +  
Sbjct: 4123 QLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVA 4182

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V  +D G
Sbjct: 4183 LTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4239

Query: 337  RLFGFGDNERAQLGHDTLRGCLEP 360
             +F +GDN+  QLG  T+     P
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQRP 4263



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 48/333 (14%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3963 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSTPT 4021

Query: 96   LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 151
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4022 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4079

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR----------- 200
            L  +G VV IA G ++   +T  G V ++G G    LGHG+  D+LQP+           
Sbjct: 4080 LSGIG-VVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCG 4138

Query: 201  --------------------AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
                                 ++     G+ V++V  G +  VAL  SG VYTWGKG   
Sbjct: 4139 VGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 4198

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P+ +++L+    + +           D+G V+ +G    G LG    G
Sbjct: 4199 RLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG---DG 4255

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4256 TVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 31/344 (9%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 52
            + I+ G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2943 IHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2993

Query: 53   ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 108
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRVTLEKPKLLESLRTKRIRDI 3051

Query: 109  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 166
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQG-HRVVQVACGSRDA 3110

Query: 167  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
              L +T  G+V+S+G G    LG G       P  ++  R  G+ VV++  G +  +AL 
Sbjct: 3111 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNGVGVVQIECGAQFSLALT 3168

Query: 227  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
              G V+TWGKG    LGHG +     P P+  L+    + V         + D+G V+ +
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAW 3228

Query: 287  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3229 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3269



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 120  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            I   V   G N   QLG   G  +  PT  S+  L ++  +  I+ G   +  V+ +G +
Sbjct: 2905 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HISGGSKSLFIVSQDGKL 2961

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2962 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3021

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LGHG+ +    P+ L SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3022 EDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3081

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3082 DNCTQ---LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3138

Query: 356  GCLEPTEI 363
            GC  P ++
Sbjct: 3139 GCSVPHQV 3146



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 113/234 (48%), Gaps = 11/234 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L S   V+S G+   G LGHG   ++ V  T+I       V  + A  +++A V
Sbjct: 588 GRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVP-TKIAL--EKQVTAIYAGASYSAAV 644

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
              G++FT G  +    GH +++   F P  V+ALK      V   +G   +  +T  G 
Sbjct: 645 SSVGELFTWGRGTYGRLGHGNSDDK-FVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           +   G    G+LG+G     P P  I   E V SV +I +G  + +A++ +G +YS+G G
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSPLPVQI---EGVSSVARIYSGSQFSVALSYDGTLYSWGKG 760

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
               LGHG       P+ +     +G  +V V+ G  H +AL SSG +Y WG+ 
Sbjct: 761 HGGRLGHGNSEHSNVPKLVHAL--EGKKIVDVAVGSAHCLALTSSGELYGWGRN 812



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 20/210 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V Q+A   + +  VT +G +YS          H    + + P+ ++    +G+ V++++A
Sbjct: 536 VRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGL--EGVSVIQIAA 584

Query: 218 GDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
             E  H +AL S+G VY+WG G  G LGHGD   K +P  ++  K   A+   A    + 
Sbjct: 585 HCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYAGASY--SA 642

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVT 333
            +   G ++ +G   +G LG    G SD    P  + +L+A+ V  ++  +G  H++ VT
Sbjct: 643 AVSSVGELFTWGRGTYGRLG---HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           D G LF +GD +  +LG+ +  G   P +I
Sbjct: 700 DGGLLFAWGDGDFGKLGNGSCNGSPLPVQI 729



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 110/257 (42%), Gaps = 42/257 (16%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L S+  VFS G    G LGHG       S+ R   I   S   VV ++    H+
Sbjct: 4040 GKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVVDIACGSAHS 4095

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFR----------------------- 93
            A +   G V T G       GH D+       R + R                       
Sbjct: 4096 ACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMG 4155

Query: 94   ---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
               P  +E+L G+   +V  G  F+  LT  G V+T G   + +LGHG+T     PK +A
Sbjct: 4156 ARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVA 4215

Query: 151  PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
             L+    ++ IA G  + +A + +G V+++G      LG G      +PR +Q+   +G 
Sbjct: 4216 ALQG-KKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSL--QGK 4272

Query: 211  HVVRVSAGDEHVVALDS 227
            H+V+V  G  H +AL +
Sbjct: 4273 HIVKVICGSAHTLALST 4289


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V++WG+   G LG G + +K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFS 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G + + +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSL--TGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 11/256 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  + ++ +VF+ G N     G   D N+    P+L+++L G+P  QV AG   +  L
Sbjct: 147 YHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA-SPQLIKSLTGIPFMQVAAGGAHSFVL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V+
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 238 YCGALGHGDEIDKTLP 253
             G LG G   ++  P
Sbjct: 323 GNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VFS G +  G LG G +  +  S   I   +    +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M+I  G  H+L ++   +V++ G +  G LG    + Q +S  R+  P    +V V + +
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL--PVLEDIVSVVSGD 126

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G V+T G NSS   G   T      P+ VE    V    V AG   +  L 
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGD-GTTTDRAEPQRVEGFTDVVA--VAAGDFHSLVLK 183

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G+N HGQLG G T     PK +  LE    VV +AAG  + LAV  +G V S
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLE---GVVALAAGFDFTLAVHADGAVSS 240

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+ S   LG G     L P  I T       +  V+AG  H VAL   G V+TWG    
Sbjct: 241 WGANSFGQLGLGTFTQRLSPERIPTLS----GITSVAAGTYHAVALGKDGTVWTWGSNSS 296

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D+ +P PL  +    A  V +    +  L++ G V  +G    G LG  D 
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGG--ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD- 353

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             +D+   P ++  L A  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 354 -TADRST-PSLVPELSA--VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGH 401



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 169/366 (46%), Gaps = 22/366 (6%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            ++  GR H LL+ ++ SV + G++  G LG G  TT       +   S A    V++   
Sbjct: 771  RLAAGRAHALLVRADGSVVAWGANASGQLGDG-GTTHGARAVTVRGVSCAR--SVASGGQ 827

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            H+  +   G V+T G+N     G   T+  +  P  VE L+G+    V  G + +  L  
Sbjct: 828  HSLVLACDGTVWTWGENQRGQLGDGTTSARVA-PGRVEGLEGIVA--VAGGGDTSLALRS 884

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V   G+N  GQ+G G   DR TP+ I  L +V   + IA G S+ LAV  +G V+++
Sbjct: 885  DGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDV---MVIALGESHALAVGEDGTVWAW 941

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYTWGKGYC 239
            G+ ++  LG G +   L P      R KG+  V  V+AG    +A+   G  + WG    
Sbjct: 942  GANASGQLGDGGETPSLLP-----ARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANES 996

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G    + +P  ++S+K   AV   A       L + G+V+ +G    G LG  D 
Sbjct: 997  GQLGDGSNQSRRVPHRVASVKGLRAVSAGAHH--AMALGEDGAVWAWGDNTLGQLG--DG 1052

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              +  V+ P+ +  L    V  ++ G   +V V   G  F +G NE  QLG       L 
Sbjct: 1053 TSAFTVMWPQRVAEL--SDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLS 1110

Query: 360  PTEIFI 365
            P E+ I
Sbjct: 1111 PAEVKI 1116



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 1    MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M I  G  H L +  + +V++ G++  G LG G ET    S           V  V+A  
Sbjct: 920  MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP---SLLPARVKGLEGVGSVAAGR 976

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  V   G  +  G N S   G   +N+    P  V ++KG+  + V+AG +    L 
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLGD-GSNQSRRVPHRVASVKGL--RAVSAGAHHAMALG 1033

Query: 120  IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G NT GQLG G +      P+ +A L +V SV   AAG  + +AV  +G  +
Sbjct: 1034 EDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESV---AAGEQFSVAVAHDGTAF 1090

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            S+GS     LG G+    L P  ++    K   VV V A  +H VAL + G +  WG   
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LG G    ++ P  +  +    AV   A    +  L   G+V+ +G  GFG LG   
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVTRVTAVSTGA--WHSLALRLDGTVWAWGANGFGQLG--- 1205

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
             G +     P  +  LR   V  I+ G YH+V V   G ++ +G N   QLG  T     
Sbjct: 1206 DGTTTARAVPVPVQGLR--DVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRA 1263

Query: 359  EPTEIFIQE 367
             P ++   E
Sbjct: 1264 LPVQVHKLE 1272



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 18/270 (6%)

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLE 153
           RL E L   P + + AG   + FLT  G V   G N+ GQLG  DT   R +P  +  LE
Sbjct: 61  RLAEPLS--PMR-IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLE 117

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++ SVV   +G ++ LA+  +G V+++GS S+  LG G   D  +P+ ++ F      VV
Sbjct: 118 DIVSVV---SGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF----TDVV 170

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            V+AGD H + L S G V+ WG  + G LG G       P+P+  L+    V + A    
Sbjct: 171 AVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDF 228

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T  +   G+V  +G   FG LG    G   + L P  + +L    ++ ++ G YH V + 
Sbjct: 229 TLAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERIPTLSG--ITSVAAGTYHAVALG 283

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             G ++ +G N   QLG  T      P  +
Sbjct: 284 KDGTVWTWGSNSSGQLGDGTWNDRAVPAPL 313



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 138/303 (45%), Gaps = 19/303 (6%)

Query: 52   VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 110
            V +++A   HA  V   G V   G N+S   G   T       R V  ++GV C + V +
Sbjct: 769  VERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGA---RAVT-VRGVSCARSVAS 824

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G   +  L   G V T G N  GQLG G T  R  P  +  LE    +V +A G    LA
Sbjct: 825  GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLE---GIVAVAGGGDTSLA 881

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  +G V+++G+ ++  +G G   D L PR I+        V+ ++ G+ H +A+   G 
Sbjct: 882  LRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALS----DVMVIALGESHALAVGEDGT 937

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG    G LG G E    LP  +  L+      V A +  +  + D G+ + +G   
Sbjct: 938  VWAWGANASGQLGDGGETPSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANE 995

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             G LG    G +     P  + S++   +  +S G +H + + + G ++ +GDN   QLG
Sbjct: 996  SGQLG---DGSNQSRRVPHRVASVKG--LRAVSAGAHHAMALGEDGAVWAWGDNTLGQLG 1050

Query: 351  HDT 353
              T
Sbjct: 1051 DGT 1053



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 162/385 (42%), Gaps = 66/385 (17%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           ++ +V S G++  G LG G   TQ +S  RI  P+ + +  V+A   HA  + + G V+T
Sbjct: 234 ADGAVSSWGANSFGQLGLG-TFTQRLSPERI--PTLSGITSVAAGTYHAVALGKDGTVWT 290

Query: 74  CGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-HVHTCGSNT 131
            G NSS   G    N R +  P     L GV   +  A L+      + G  V   G+N 
Sbjct: 291 WGSNSSGQLGDGTWNDRAVPAP-----LPGVGGARAVASLDAGSLALLEGGDVLAWGANN 345

Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
            GQLG GDT DR TP S+ P  E+ +V  +  G  + LA+  +G ++++G G    LGHG
Sbjct: 346 SGQLGDGDTADRSTP-SLVP--ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHG 402

Query: 192 EQHDELQPRAIQTF---------------------------------------------R 206
                + P  +                                                R
Sbjct: 403 GSERHVVPATVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVR 462

Query: 207 RKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             G+  VR V+A   H +A+   G V+TWG+   G LG G   D+  P  +S L S LA 
Sbjct: 463 VPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLA- 521

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            + A       L   G V+ +G+   G LG    G S   L P  +  L    +  ++ G
Sbjct: 522 -IAAGGSHVLALRSDGDVWAWGYNALGQLG---DGTSGDKLTPVRVPGLAP--IQSVAAG 575

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLG 350
            Y ++ + + G ++ +G+    QLG
Sbjct: 576 TYFSMALANDGTVWTWGEGFEGQLG 600



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H L L  + ++++ G  L G LGHG      V  T +      +V  ++    H
Sbjct: 372 VVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL---TNVTSMATGSFH 428

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +   L+ G V+  G NS    G    T R +  P  V  L  V  + V A  + +  + +
Sbjct: 429 SLAALEDGSVWAWGRNSYGQLGDGTVTERHV--PVRVPGLPSV--RAVAAAGHHSIAVAM 484

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V T G N  GQLG G T DR  P +++ L    SV+ IAAG S++LA+  +G V+++
Sbjct: 485 DGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT---SVLAIAAGGSHVLALRSDGDVWAW 541

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 239
           G  +   LG G   D+L P      R  G+  ++ V+AG    +AL + G V+TWG+G+ 
Sbjct: 542 GYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFE 596

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G  + +  P  +  L     + V +       +   G+V+ +G    G LG  D 
Sbjct: 597 GQLGDGGGVQRLSPVAVKGLSDIRNISVGS--AHALAVRGDGTVWAWGDNNEGQLG--DG 652

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              D+   P  + +L    ++ +S G  H++ +   G +  +G N   QLG  TL   + 
Sbjct: 653 SWMDR-FAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVL 709

Query: 360 PTEI 363
           P+ I
Sbjct: 710 PSVI 713



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 162/396 (40%), Gaps = 65/396 (16%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG +H+L  + + SV++ G +  G LG G  T + V       PS   V  V+A+ +H
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAAAGHH 478

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRL------------VEALKG---- 102
           +  V   G V+T G N++   G    RD  RP+    L            V AL+     
Sbjct: 479 SIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDV 538

Query: 103 ----------------------------VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
                                        P + V AG  F+  L   G V T G    GQ
Sbjct: 539 WAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQ 598

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LG G  + R +P ++  L ++     I+ G ++ LAV G+G V+++G  +   LG G   
Sbjct: 599 LGDGGGVQRLSPVAVKGLSDI---RNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWM 655

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   P  +Q     GI    VS G  H +AL + G V  WG    G LG G    + LP 
Sbjct: 656 DRFAP--VQVRNLTGI--TAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPS 711

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +  L    A+           L    ++ G+G+  FG LG    G S + ++ R +   
Sbjct: 712 VIPGLSGIQALHPG--HLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIG-- 767

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               V +++ G  H ++V   G +  +G N   QLG
Sbjct: 768 ---RVERLAAGRAHALLVRADGSVVAWGANASGQLG 800



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 148/351 (42%), Gaps = 20/351 (5%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            ++ G +H + +  + +V++ G +  G LG G      +   R+   S   V  V+A E  
Sbjct: 1022 VSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DVESVAAGEQF 1079

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLT 119
            +  V   G  F+ G N     G   T  P   P  V+    K      V A       L 
Sbjct: 1080 SVAVAHDGTAFSWGSNEYGQLGDGKTG-PRLSPAEVKIGGSKARTVVTVGAWGQHAVALM 1138

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G +   G N  GQLG G T  R +P  I     V  V  ++ G  + LA+  +G V++
Sbjct: 1139 ADGTLQAWGDNATGQLGDGTTTRRSSPGEI---RGVTRVTAVSTGAWHSLALRLDGTVWA 1195

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G+     LG G       P  +Q  R     VV ++AG  H VA+ S G V+TWG    
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLR----DVVAIAAGGYHSVAVRSDGTVWTWGYNTF 1251

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G    + LP  +  L+   A  V      +  L   G+V G+G    G LG   R
Sbjct: 1252 GQLGDGTSESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSR 1309

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              +D+    R+ D      ++++  G  HTV +   G ++ +GDN   QLG
Sbjct: 1310 --TDRYTPVRLKD---VDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 158/411 (38%), Gaps = 68/411 (16%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFV 65
            ++   +  + + FS GS+  G LG G    +   +  +I    A  VV V A   HA  +
Sbjct: 1078 QFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVAL 1137

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHV 124
            +  G +   GDN++   G   T R   R    E ++GV     V+ G   +  L + G V
Sbjct: 1138 MADGTLQAWGDNATGQLGDGTTTR---RSSPGE-IRGVTRVTAVSTGAWHSLALRLDGTV 1193

Query: 125  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
               G+N  GQLG G T  R  P    P++ +  VV IAAG  + +AV  +G V+++G  +
Sbjct: 1194 WAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYNT 1250

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVV------------------------------- 213
               LG G       P  +Q  + +G+  V                               
Sbjct: 1251 FGQLGDGTSESRALP--VQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGS 1308

Query: 214  -----------------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPE 254
                              V AG  H VAL   G V+TWG    G LG G      + +P+
Sbjct: 1309 RTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPK 1368

Query: 255  PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            P+S L +  A  + A    +F        + +G    G LG  D     +  R ++L  L
Sbjct: 1369 PVSGLPA--ATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGL 1426

Query: 315  RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
            +      I+ G   ++ +T  G L  +G +    LG   L     P  + +
Sbjct: 1427 KV-----IAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLL 1472



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 9/166 (5%)

Query: 200 RAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLS 257
           RA Q  R  + +  +R++AG +H + L  +G V+ WG    G LG  D    +  P  L 
Sbjct: 55  RAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLP 114

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L+    V V +    +  L   G+V+ +G    G LG  D   +D+   P+ ++     
Sbjct: 115 VLED--IVSVVSGDAHSLALGADGTVWTWGSNSSGQLG--DGTTTDRA-EPQRVEGFT-- 167

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V  ++ G +H++V+   G ++ +G N   QLG    +  L P  +
Sbjct: 168 DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPV 213


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 170/346 (49%), Gaps = 20/346 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +VVQV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVVQVACSDR 102

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G VYTWG
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280

Query: 236 KGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           +G  G LGH   G E D   P+ LS+L+    V +      +  L D G +Y +G     
Sbjct: 281 QG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMT--K 336

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           ++G   +G+   +  P     L+  ++ Q+     H++ ++D G L
Sbjct: 337 NIGHGIQGIHPNM--PSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 94  PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 206
           +   +VVQ+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 325
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGH 351
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GS+ +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 246
           LG G   D L PR   + +    +VV+V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 247 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 154/336 (45%), Gaps = 13/336 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 141 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PQMIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSV 295

Query: 319 VSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 353
           V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 296 VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSE-- 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     V++WG+   G LG G E  K T P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRSQKVVHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +CV   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECVRVPRNIRSLSEIQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRS-QKVVHICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T   +  PR + +L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G    + T P+ I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRSQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GSVV QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 151/312 (48%), Gaps = 14/312 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            S    VQ+         V Q G++F CG+  N     G    N P  +PR + +L     
Sbjct: 2945 STLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP--QPRQLTSLSQYVI 3002

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     V  IA 
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIAC 3061

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+  NG +Y++G G    LGHG+   +L+P+ ++    +G  V++V+ G  D  
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKAL--EGQRVIQVALGSRDAQ 3119

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL  SG VY+WG G  G LG G     ++P P+  L      Q+    + +  L  +G
Sbjct: 3120 TLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSG 3179

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P+++++L+   V+ ++ G  H + V D G+++ +
Sbjct: 3180 QVWTWGKGDYFRLG---HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAW 3236

Query: 342  GDNERAQLGHDT 353
            GDN+  Q G+ T
Sbjct: 3237 GDNDHGQQGNST 3248



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 147/288 (51%), Gaps = 10/288 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            QVF  G N     G    ++ I  P + E L  + C Q+  G      +T  G +  CG 
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973

Query: 130  NTHGQLGHGDTL-DRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G +  + P P+ +  L + V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2974 ATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3033

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  R K   V  ++ G  H  A+ S+G +YTWG G  G LGHGD 
Sbjct: 3034 LGHFSRMNCDKPRLIEALRSK--RVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDN 3091

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ + +L+    +QV   +R  +T  L D+G+VY +G   FG LG   RG S+  
Sbjct: 3092 TTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG---RGGSEGC 3148

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LGH T
Sbjct: 3149 SVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3196



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P++I  
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     VV IAAG ++   +T  G +YS+G G    LGHG+  D+ +P+ +   +   + 
Sbjct: 4072 LRG-KEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVT 4130

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + +     V++WG G  G LG G      +P  + +L+    ++V    
Sbjct: 4131 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGS 4190

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D + RPR   +L+   +  I+ G  H V 
Sbjct: 4191 QFSVALTKSGAVYTWGKGDYHRLG---HGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             TD G ++ +GDN+  QLG  T      P
Sbjct: 4248 CTDAGEVYTWGDNDEGQLGDGTTNAIQRP 4276



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 146/303 (48%), Gaps = 19/303 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 110
           ++QV+ S N    +L++G+V+   +++     H   T   I   +L    +G  C  +T+
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTS 495

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
                      G V++ G+   G+LGHGDT+   +P  I  L    SVV +A G  +  A
Sbjct: 496 ----------EGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG-KSVVNVACGSHHSAA 544

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSS 228
           +T +G ++++G GS   LG G   D L P  +      G+ VV V+  +GD   +AL  +
Sbjct: 545 ITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLL--GVTVVDVACGSGDAQTIALADT 602

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G VY+WG G  G LG G       P+ +  L+     +V    + +  +   G+V+ +G 
Sbjct: 603 GSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGN 662

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
                LG    G  + V  PR +++L   HV+ +S G +H +  T+ G L  +G N++ Q
Sbjct: 663 GEGYKLG---HGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQ 719

Query: 349 LGH 351
           LG 
Sbjct: 720 LGE 722



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 127/274 (46%), Gaps = 7/274 (2%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           + G +   L S   V+S G+   G LGHG +T  C S   IN      VV V+   +H+A
Sbjct: 485 SEGSHCLALTSEGDVYSWGNGDFGKLGHG-DTVTCDSPMLINELHGKSVVNVACGSHHSA 543

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
            +  SG++FT G  S    G   T   I  P LV  L GV    V   +G   T  L   
Sbjct: 544 AITASGELFTWGRGSFGRLGLGSTED-ILTPALVSGLLGVTVVDVACGSGDAQTIALADT 602

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V++ G   +G+LG G +     PK +  L+ +  V ++  GP Y  AV  NG V+++G
Sbjct: 603 GSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGL-DVTRVYCGPQYSAAVCKNGAVFTWG 661

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           +G  + LGHG +     PR ++T    G HV  +S G  H +A    G + +WG+   G 
Sbjct: 662 NGEGYKLGHGTEEHVRFPRQVETL--AGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQ 719

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           LG G    K  P   +SL     + +     +TF
Sbjct: 720 LGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTF 753



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 19/289 (6%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I +G  H L +S    V+S G    G LGHG   + C     I       VV ++A   H
Sbjct: 4028 INSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRAIESLRGKEVVDIAAGGAH 4086

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            +A +  +G++++ G       GH D+     +P+LV+ALKG     V  G      L I 
Sbjct: 4087 SACITSTGELYSWGKGRYGRLGHGDSEDQT-KPKLVDALKGYRVTDVACGSGDAQTLCIT 4145

Query: 122  GH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L+ +G V+++  G  + +A+T +G VY+
Sbjct: 4146 DDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGSQFSVALTKSGAVYT 4204

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG +    +PR   T   +G  +V ++ G  H VA   +G VYTWG    
Sbjct: 4205 WGKGDYHRLGHGTEDHIRRPRRCTTL--QGKKIVSIACGSLHCVACTDAGEVYTWGDNDE 4262

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G LG G       P  +++L+            K    V  GS +   W
Sbjct: 4263 GQLGDGTTNAIQRPRLVAALQG-----------KKINRVACGSAHSLAW 4300



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G +   G N  GQLG  +      P S   L  +  V Q+  G   + ++TG+G V + G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPV-QLIGGEQTLFSITGDGKVCATG 3994

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G       P  I++ +   I  V +++G +H +AL + G VY+WG+G  G 
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + SL+    V + A    +  +  TG +Y +G   +G LG  D   
Sbjct: 4055 LGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD--- 4111

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+   +P+++D+L+ + V+ ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4112 SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV 4171

Query: 360  PTEI 363
            P +I
Sbjct: 4172 PMKI 4175



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
            + +G ++T G       GH D N    RP+LV+AL+G    QV  G     T  LT  G 
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGD-NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LG G +     P  I  L  VG V QI  G  + LA+T +G V+++G G
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++T   KG  V  V+ G  H +++  +G VY WG    G  G
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETL--KGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245

Query: 244  H 244
            +
Sbjct: 3246 N 3246



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 158 VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
           ++++AA    S+ LA+T  G VYS+G+G    LGHG+      P  I      G  VV V
Sbjct: 478 IIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELH--GKSVVNV 535

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRK 273
           + G  H  A+ +SG ++TWG+G  G LG G   D   P  +S L     V V   +   +
Sbjct: 536 ACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQ 595

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T  L DTGSVY +G   +G LG   RG S+    P+++D L+   V+++  G  ++  V 
Sbjct: 596 TIALADTGSVYSWGDGEYGKLG---RGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVC 652

Query: 334 DRGRLFGFGDNERAQLGHDT 353
             G +F +G+ E  +LGH T
Sbjct: 653 KNGAVFTWGNGEGYKLGHGT 672



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 103  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
            V  K+V  G   +G   I+  V   G N   QLG        TP     L  +   VQI 
Sbjct: 2898 VMAKKVKCG---SGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTL-KCVQIV 2953

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEH 221
             G   +  VT +G +++ G  +N  LG G     + QPR + +  +  I  V V +G  H
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRH 3013

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG+G  G LGH   ++   P  + +L+S     +      +  ++  G
Sbjct: 3014 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNG 3073

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 339
             +Y +G   +G LG  D       LRP+++ +L    V Q++ G     T+ +TD G ++
Sbjct: 3074 DLYTWGLGEYGRLGHGDNTTQ---LRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130

Query: 340  GFGDNERAQLGHDTLRGCLEPTEI 363
             +GD +  +LG     GC  P  I
Sbjct: 3131 SWGDGDFGKLGRGGSEGCSVPHPI 3154



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 127 CGSN---THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           CG+      G L   D     TP +I    ++  ++Q+A   + +L +   G VY   + 
Sbjct: 402 CGAQELFAWGWLSTSDATCHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNS 461

Query: 184 SNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCG 240
           +             +P+++        I +++++A  E  H +AL S G VY+WG G  G
Sbjct: 462 A-------------EPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFG 508

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD +    P  ++ L     V V      +  +  +G ++ +G   FG LG    G
Sbjct: 509 KLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGL---G 565

Query: 301 VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            ++ +L P ++  L    V  ++  +G   T+ + D G ++ +GD E  +LG     GC 
Sbjct: 566 STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCK 625

Query: 359 EP 360
            P
Sbjct: 626 AP 627



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAA 63
            G +   +ISN  +++ G    G LGHG  TTQ +    +       V+QV+  + +    
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKALEGQRVIQVALGSRDAQTL 3121

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             +  SG V++ GD      G R  +     P  +E L GV   Q+  G  F+  LT  G 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ 3180

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V T G   + +LGHG       P+ +  L+    V  +A G  + L+V  NG VY++G  
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQLVETLKG-KKVTHVAVGALHCLSVLDNGQVYAWGDN 3239

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---LDSS 228
             +   G+       +P  +Q    +G  + RV+ G  H +A   LDSS
Sbjct: 3240 DHGQQGNSTTTVNRKPALVQGL--EGCKISRVACGSSHSIAWCTLDSS 3285



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 8/205 (3%)

Query: 5    TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL I++  SV+S G    G LG G  +  C    +I+      V++V      + 
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH  T   I RPR    L+G     +  G       T  G 
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGH-GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGE 4253

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA + N  V +    
Sbjct: 4254 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHSLAWSTNKPVNAGKLP 4312

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRK 208
            +   +    +++ LQ   I   R +
Sbjct: 4313 AQIPM----EYNSLQSLPINVLRNR 4333


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4300

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLVTV 4324



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4205



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  ++Q+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G     +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   ++QV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIIQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 IQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4307

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4308 GSNSEGQLGLGHTNHVREPTLVTV 4331



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4212



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 156 VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 214

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 215 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 274

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 275 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 332

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 333 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 392

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 393 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 449

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           F +G     +LGH  +     PT++
Sbjct: 450 FTWGKGANGRLGHGDIEDRKVPTQV 474



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 211 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 270

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 271 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 329

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 330 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 388

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 446

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 447 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 478



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 131 DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 190

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 191 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 248

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 249 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 305

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 306 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 365

Query: 359 EPT 361
           +PT
Sbjct: 366 KPT 368



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 85  RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 135 RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 194

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 201
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 195 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 253

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 254 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 312

Query: 262 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 313 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 369

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 370 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 417



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 266 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 325

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 326 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 382

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 383 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 441

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 442 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 482



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 109 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 168

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 169 VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 225

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 226 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 254


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 12/363 (3%)

Query: 17   SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
            +++  G +  G LG G E  +    T I   ++   +Q+   E     V   G+++  G 
Sbjct: 3182 TIYGWGHNHRGQLG-GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 77   NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 134
             +S   G   T+  +  P L+E+++ V  K+V   +G      L++ G V++ G    G+
Sbjct: 3241 GASGRLGIGGTDS-VSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 135  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
            LGHG+      P+ I  L     V+ IA G ++   VT +G +Y++G G    LGHG+  
Sbjct: 3300 LGHGNRTQCDRPRVIESLRG-KEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358

Query: 195  DELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
            D+L+P+       KG  V+ V+  +GD   + +     V++WG G  G LG G      +
Sbjct: 3359 DQLRPKMADAL--KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P+ + +L S    +V    + +  L  +G VY +G   +  LG    G  D V RPR + 
Sbjct: 3417 PQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVA 3473

Query: 313  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
            +L+   +  I+TG  H V  +D+G ++ +GDN+  QLG  T      P  +   + ++ T
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKIT 3533

Query: 373  GLA 375
             +A
Sbjct: 3534 NVA 3536



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 10/303 (3%)

Query: 54   QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            Q SA ++  +  +Q+ +VF  G N     G    ++ I  P L E L  +       G  
Sbjct: 2192 QRSAGDHGGSREIQT-KVFVWGLNDKDQLGGPRGSK-IKTPVLNEFLSSLKVVCCAGGSK 2249

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 172
                +T  G V+ CG  T+G+LG G + +   PK +  L + V   V + +G  + +A+T
Sbjct: 2250 SLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT 2309

Query: 173  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             +G V+S+G G +  LGH  + +  +PR ++  + K I    ++ G  H  A+ SSG +Y
Sbjct: 2310 VDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIR--DIACGSSHSAAVTSSGELY 2367

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 290
            TWG G  G LGHGD   +  P+ + +L     +QV   +R  +T  L D G VY +G   
Sbjct: 2368 TWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            FG LG   RG S+    P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LG
Sbjct: 2428 FGKLG---RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484

Query: 351  HDT 353
            H T
Sbjct: 2485 HGT 2487



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 8/338 (2%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
             + VF  G +    LG GP  ++  +     F S+  VV  +        V   G+V+ C
Sbjct: 2205 QTKVFVWGLNDKDQLG-GPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 75   GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 132
            G+ ++   G   +++ +  P+ V  L     K+V   +G      LT+ G V + G    
Sbjct: 2264 GEGTNGRLG-LGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 133  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            G+LGH   ++   P+ +  L+    +  IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALK-TKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
               +L+P+ ++    K +  V   + D   + L   G VY+WG G  G LG G     ++
Sbjct: 2382 STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV 2441

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L     +Q+    + +  L   G V+ +G   +  LG    G    V +P++ +
Sbjct: 2442 PHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG---HGTDSHVRKPQVAE 2498

Query: 313  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             L+   +  ++ G  H + VTD G++F +GDN+  Q G
Sbjct: 2499 GLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 17/337 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 55
            +QI  G      ++ +  +++ G    G LG G   T  VS T     S  HV    V V
Sbjct: 3217 IQIVGGEQTLFAVTADGKLYATGYGASGRLGIG--GTDSVS-TPTLLESIQHVHIKKVAV 3273

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
            ++   HA  +   G+V++ G+      GH +  +   RPR++E+L+G     +  G   +
Sbjct: 3274 NSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPRVIESLRGKEVIDIACGGAHS 3332

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTG 173
              +T  G ++T G   +G+LGHGD+ D+  PK    L+    V+ +A  +G S  L ++ 
Sbjct: 3333 ACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGY-RVIDVACGSGDSQTLCISD 3391

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +  V+S+G G    LG G       P+ +       I V +V  G +  +AL  SG VYT
Sbjct: 3392 DDNVWSWGDGDYGKLGRGGSDGCKVPQKVDAL--SSIGVCKVECGSQFSIALTKSGCVYT 3449

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P  +++L+    + +           D G VY +G    G 
Sbjct: 3450 WGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQ 3509

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            LG    G ++ + RPRI+ +L+   ++ ++ G  HTV
Sbjct: 3510 LG---DGTTNAIQRPRIVTALQDKKITNVACGSAHTV 3543



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 11   LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQ 67
            ++ +   V++CG    G LG G  ++Q V   +     + +VV+   V +   HA  +  
Sbjct: 2253 VVTAEGKVYACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310

Query: 68   SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
             G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T 
Sbjct: 2311 DGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 128  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGS 184
            G   +G+LGHGD+  +  PK +  L  VG  V+Q+A G   +  L +T  G+VYS+G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPKLVKAL--VGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LG G       P  ++  R  G  V+++  G +  +AL  +G V+TWGKG    LGH
Sbjct: 2428 FGKLGRGGSEGCSVPHNVE--RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            G +     P+    LK    + V         + DTG V+ +G    G  G     V+ K
Sbjct: 2486 GTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK 2545

Query: 305  VLRPRILDSLRAHHVSQISTGLYHT 329
               P ++  L    +++++ G  H+
Sbjct: 2546 ---PALVQGLEGVRITRVACGSSHS 2567



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  G N  GQLG  +      P +I  L  +  + QI  G   + AVT +G +Y+ G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPI-QIVGGEQTLFAVTADGKLYATG 3239

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G++  LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+G  G 
Sbjct: 3240 YGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + SL+    + +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3300 LGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+  LRP++ D+L+ + V  ++  +G   T+ ++D   ++ +GD +  +LG     GC  
Sbjct: 3357 SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 360  PTEI 363
            P ++
Sbjct: 3417 PQKV 3420



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     +       +  ++   +H+A V
Sbjct: 2302 GRHAMALTVDGKVFSWGEGDDGKLGH-LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAV 2360

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 123
              SG+++T G       GH D+   + RP+LV+AL G    QV  G      LT+   G 
Sbjct: 2361 TSSGELYTWGLGEYGRLGHGDSTTQL-RPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V++ G    G+LG G +     P ++  L   G V+QI  G  + LA+T  G V+++G G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQG-VIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+  +    KG  ++ V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGL--KGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536

Query: 244  HG 245
             G
Sbjct: 2537 DG 2538



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 17/262 (6%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQI-- 161
            +Q +AG +  G   I+  V   G N   QLG   G  +  P       L E  S +++  
Sbjct: 2191 RQRSAG-DHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPV------LNEFLSSLKVVC 2243

Query: 162  -AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
             A G   +  VT  G VY+ G G+N  LG G   +   P+ +    +  +  V V +G  
Sbjct: 2244 CAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGR 2303

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            H +AL   G V++WG+G  G LGH   ++   P  L +LK+     +      +  +  +
Sbjct: 2304 HAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRL 338
            G +Y +G   +G LG  D   S   LRP+++ +L    V Q++ G     T+ +TD G +
Sbjct: 2364 GELYTWGLGEYGRLGHGD---STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMV 2420

Query: 339  FGFGDNERAQLGHDTLRGCLEP 360
            + +GD +  +LG     GC  P
Sbjct: 2421 YSWGDGDFGKLGRGGSEGCSVP 2442



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P  + SL S   +Q+   ++  F + 
Sbjct: 3171 DDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVT 3230

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y  G+   G LG    G +D V  P +L+S++  H+ +++  +G  H + ++  G
Sbjct: 3231 ADGKLYATGYGASGRLGI---GGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEG 3287

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVI 3314



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D+L P+ +   + +    + + + D   +A+  +G ++++G G  G LG G      LP+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY---GFGW 288
            +  L+   AV  C   + + +L  TG+VY    F W
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAW 100



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 142 DRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
           D+ TPK ++ L+E    V IA G +    LAVT  G+++SFG+G    LG G       P
Sbjct: 4   DQLTPKLVSGLKE-QKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLP 62

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           + +     +G H V    G++  V L  +G VYT
Sbjct: 63  KLVDKL--QGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 249 DKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           D+  P+ +S LK    V +   +   +T  + DTG ++ FG   +G LG   RG SD   
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLG---RGGSDGCK 60

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            P+++D L+  H      G   +V++T  G ++
Sbjct: 61  LPKLVDKLQGQHAVIACCGNQFSVILTKTGTVY 93


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 85  RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 201
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 262 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2901 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2958

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2959 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3017

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3075

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3076 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3135

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3136 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3193 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3218



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2930 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2989

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 2990 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3047

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3048 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3104

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3105 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3150



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4012

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4013 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4071

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4072 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4129

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4130 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4189

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4190 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3999

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4000 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4118

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4119 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4176 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4204



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 412

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 590

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 591 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647

Query: 345 ERAQ 348
           ++ Q
Sbjct: 648 DQCQ 651



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 20/269 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P   E L  +   QV         L+  G V+T   N+          D   P+ + 
Sbjct: 350 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQ 399

Query: 151 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 206
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 400 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 458

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + 
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 518

Query: 267 VC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V   +   +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  
Sbjct: 519 VACGSGDAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRC 575

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G   ++ +T  G+++ +G  +  +LGH T
Sbjct: 576 GSQFSIALTKDGQVYSWGKGDNQRLGHGT 604



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3919

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3979

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3980 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4039

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4040 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4096

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4097 CKVPMKI 4103



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3956 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4014

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4015 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4073

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4074 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4132

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4133 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4190

Query: 240  GALGHG 245
            G LG G
Sbjct: 4191 GQLGDG 4196



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2967 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIQALKTKRIRDIAYGSSHSAPL 3025

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3026 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3084

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3085 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3143

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3144 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3201

Query: 244  HG 245
            +G
Sbjct: 3202 NG 3203



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 468

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 469 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 527

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 586

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V++W
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEVHSW 644

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 645 GSN--DQCQHFDTLGVTKPEP 663



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 413

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 414 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 473

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 474 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 530

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 567



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3073

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3074 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3132

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3133 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3191

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3234



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4122

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4123 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4181

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4182 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4227



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P +   L+    +V IA GP+   A
Sbjct: 641 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDS-KHIVGIACGPAQSFA 686



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3854 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3913

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3914 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3997



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2928

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2929 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 2986 DDGKLGHFSRMNCDKPRLI 3004


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 143

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 144 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 202

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 260

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 261 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 320

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 347
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 321 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 377

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG+ TL     P  +
Sbjct: 378 QLGNGTLESSALPVTV 393



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 21/274 (7%)

Query: 86  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 68  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 120

Query: 146 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 199
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 121 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 179

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLS 257
           + I+  +   +H+V+++ G  H +AL ++G +++WG    G LG G +   ++ LP  +S
Sbjct: 180 KVIK--KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 237

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L       V      +  L  +G+V+ +G    G LG  D+   D+ L P +L  LR+ 
Sbjct: 238 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ--RDR-LHPTVLKPLRSQ 294

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +  +  G  HT  +T  G +F FG     QLGH
Sbjct: 295 RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 14/300 (4%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 89  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 145

Query: 61  HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 146 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 203

Query: 119 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 204 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 262

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 320

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G  G LGHG ++++ +P  +  L      Q+ C R         +G +Y FG    G LG
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLG 380



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 140 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 199

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 200 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 259

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 318

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 239
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 319 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 376

Query: 240 GALGHGDEIDKTLP 253
           G LG+G      LP
Sbjct: 377 GQLGNGTLESSALP 390



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)

Query: 231 VYTWGKGYCGALGH---GDEIDK----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           +Y+WG G  G LG     D +D     + PE +    +    +V    + T VL+  GSV
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y  G   FG LG       D+ +R    + +L AH +  ++ G  H++ ++D G++F +G
Sbjct: 107 YSCGANDFGQLG------QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG 160

Query: 343 DNERAQLG 350
            N   QLG
Sbjct: 161 CNRNGQLG 168


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKSI----APLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 80.9 bits (198), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 85  RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 201
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 262 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 10/277 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P+F PR+     G   K+V  G   T FL   G V+TCGSN+ GQLGH    +  +P+ +
Sbjct: 20  PVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELV 77

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRK 208
             L+    +  ++ G ++ +AV   G V+ +G+G    LG       ++ PR ++     
Sbjct: 78  GALD-TQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDH 136

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 267
            I   +V  G++H +AL   G ++TWG+   G LG G  E  K  P P+ SL      Q+
Sbjct: 137 SIS--QVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQI 194

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
            A     F L  +G+V+G+G    G LG  D+   D+ + P  +  LR+  V  IS G  
Sbjct: 195 TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK--QDRAV-PCHIKFLRSQRVVYISCGDE 251

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           HT  +T  G LF FGD  R QLGH +    L P  + 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM 288



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 14/311 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +V+    H  F+LQ G V+TCG NS   CG    ++    P LV AL       V+ G  
Sbjct: 37  EVACGGQHTLFLLQDGSVYTCGSNS---CGQLGHDKAGNSPELVGALDTQKITMVSCGRA 93

Query: 114 FTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            +  +  +G V   G+   GQLG    +T  R  P+ +  L +  S+ Q+  G  + +A+
Sbjct: 94  HSVAVNEQGQVFVWGAGDGGQLGLETAETAVR-IPRLLKKLCD-HSISQVVCGNQHCIAL 151

Query: 172 TGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           + +G ++++G  S+  LG G+ +  +L P  +++    GI + +++AG +H  AL  SG 
Sbjct: 152 SRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSL--AGIPLAQITAGGDHCFALSLSGA 209

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           V+ WGK   G LG  D+ D+ +P  +  L+S   V +      T  L  +G ++ FG   
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQL 349
            G LG    G S+  L PR +  L    VSQI+ G +HT+  V   G ++ FG N   QL
Sbjct: 270 RGQLG---HGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQL 326

Query: 350 GHDTLRGCLEP 360
           G   L     P
Sbjct: 327 GTGILADLRSP 337



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 137/302 (45%), Gaps = 19/302 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQV 55
           ++  G  HTL L+ + SV++CGS+ CG LGH      PE    +   +I          V
Sbjct: 37  EVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITM--------V 88

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           S    H+  V + GQVF  G       G       +  PRL++ L      QV  G    
Sbjct: 89  SCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHC 148

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
             L+  G + T G N+ GQLG G     + +P  +  L  +  + QI AG  +  A++ +
Sbjct: 149 IALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGI-PLAQITAGGDHCFALSLS 207

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+ +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL  SG ++T+
Sbjct: 208 GAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQ--RVVYISCGDEHTAALTKSGGLFTF 265

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGS 293
           G G  G LGHG   ++ LP  +  L      Q+ C R      +  +G+VY FG    G 
Sbjct: 266 GDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQ 325

Query: 294 LG 295
           LG
Sbjct: 326 LG 327



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QIT G  H   +S S +VF  G +  G LG   +  + V    I F  +  VV +S  + 
Sbjct: 193 QITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP-CHIKFLRSQRVVYISCGDE 251

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 119
           H A + +SG +FT GD S    GH  +N  +  PR V  L G    Q+T G + T  F+ 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-PRRVMELMGTEVSQITCGRHHTLAFVP 310

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
             G V+  G N+HGQLG G   D  +P    P++     + +  G  Y+   TG
Sbjct: 311 SSGTVYAFGCNSHGQLGTGILADLRSPH---PVKNDFLTLNLRKGKVYLRIDTG 361


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 128/255 (50%), Gaps = 3/255 (1%)

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 157
           EA  G   +Q  +G   +  L   G VH CG N+ GQLG      R  P  I  LE + +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETL-N 74

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  ++ G  + LAV   G V+++G+GS   LG GE   EL    ++     GI +++VS 
Sbjct: 75  VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSC 133

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           G  H +AL   G V++WG    G LG G E + +  P+ + SL+     QV A    +F 
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFA 193

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT V+T  G
Sbjct: 194 LSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDG 253

Query: 337 RLFGFGDNERAQLGH 351
           ++F FGDN   QLGH
Sbjct: 254 KVFTFGDNSSGQLGH 268



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 27/300 (9%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           Q  +G  H+LL+ S+ +V +CG + CG LG         P   Q +    ++        
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDL------- 77

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            +S  + H+  V   G+VF  G  S    G  +     F P  V+AL G+   QV+ G  
Sbjct: 78  -LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +  L+  G V + G+N+HGQLG G + L + +P+ +  LE +  + Q+AAG ++  A++
Sbjct: 137 HSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI-PLAQVAAGGAHSFALS 195

Query: 173 GNGVVYSFGSGSN----FCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +G   SFG GSN      L G+       +PR+I   +  G  VV +S G EH   L  
Sbjct: 196 LSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG--VVYISCGSEHTAVLTQ 251

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G V+T+G    G LGHG   +K  P+ +  +   ++   C        +  T  V  FG
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFG 311



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A + Q ++ E H+  +L  G V  CGDNS    G R       RP L++AL+ +    ++
Sbjct: 21  AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRK-RPGLIQALETLNVDLLS 79

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TP  +  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI-KIIQVSCGHYHS 138

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL--EGIPLAQVAAGGAHSFALSL 196

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           SG  + WG    G L   G+   +    P  + +LK    V +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVF 256

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            FG    G LG    G + +   P++++ +    VSQI  G YHT+V
Sbjct: 257 TFGDNSSGQLG---HGPTAEKRGPQLVEGIDG-LVSQIDCGSYHTLV 299



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 25/283 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +  SG  F  G N++        N P+  ++PR + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAV 248

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V T G N+ GQLGHG T ++  P+ +  ++  G V QI  G  + L       V
Sbjct: 249 LTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGID--GLVSQIDCGSYHTL-------V 299

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD------EHVVALDSSGYV 231
           Y + +      G G        R+    +   +  + +SA D      +H+ A   + +V
Sbjct: 300 YVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCL-ISADDLVNVQVKHIFAGTYANFV 358

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
            T+      ++       KTLPE +S +   L  +  A +R T
Sbjct: 359 TTYQDATSTSVSR-----KTLPE-ISRINQPLIKKWIAVERST 395


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 159/369 (43%), Gaps = 21/369 (5%)

Query: 3   ITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQ 54
           +  G  H+L +    S S V S G    G LGHG     +  Q V        ++ H   
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC-- 69

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
              +E   A      QV++ G       G  D  + +F P  + AL G     V  G   
Sbjct: 70  --GAEYSMAVAGGDKQVYSWGWGDFGRLGTGDV-KDVFIPCPLPALAGRRVASVACGDTH 126

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G +   G N +GQ G G   D   P+ +  L+    VV +A G  + + VT  
Sbjct: 127 TLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGK-EVVAVACGAEHSMCVTSE 185

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY +G G    +G GE  D   P   +    +G+ V +V+ G  H +A+D  G +YTW
Sbjct: 186 GEVYCWGWGRYGNIGDGESQDRHLPTLAKGL--EGVKVAQVNCGWRHSIAVDEGGAMYTW 243

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G    L  GD  D  +P+ + +++      V    R T      G ++  GW  FG  
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFGQC 301

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G ++ V+R + +++L    V Q+ +G  HT+ VT  G+ F +G N   QLGH  +
Sbjct: 302 GV---GHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGM 358

Query: 355 RGCLEPTEI 363
           +    P E+
Sbjct: 359 QDSNSPVEL 367



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)

Query: 211 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
            V+ ++ G  H +AL    S   V +WG+G  G LGHGD  D+  P+ + SL    A  V
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 268 -CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
            C  +    V      VY +GW  FG LG  D  V D V  P  L +L    V+ ++ G 
Sbjct: 68  HCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKD-VFIPCPLPALAGRRVASVACGD 124

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            HT+V T  G+LF FG N+  Q G  +++ CLEP  +   + +E   +A
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVA 173



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 9/277 (3%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HTL+  +   +F+ G +  G  G G     C+    +       VV V+    H
Sbjct: 120 VACGDTHTLVATAEGQLFAFGRNQNGQCGLG-SIQDCLEPQLVTALQGKEVVAVACGAEH 178

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G+V+  G       G  ++      P L + L+GV   QV  G   +  +   
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIGDGESQDRHL-PTLAKGLEGVKVAQVNCGWRHSIAVDEG 237

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G ++T G   + QL  GD  D   PK +  +++V +V   A G  + +A    G +  F 
Sbjct: 238 GAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQVATV---AGGWRHTMAADSQGRL--FA 292

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG N     G  H+E   R  Q     G  VV+V +G +H +A+  +G  ++WG+   G 
Sbjct: 293 SGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQ 352

Query: 242 LGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVL 277
           LGH    D   P  L++L +  +      R+ +  VL
Sbjct: 353 LGHSGMQDSNSPVELAALSRGGINTDALTRQAQPVVL 389


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 170/346 (49%), Gaps = 20/346 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +V+QV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVIQVACSDR 102

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G VYTWG
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280

Query: 236 KGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           +G  G LGH   G E D   P+ LS+L+    V +      +  L D G +Y +G     
Sbjct: 281 QG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMT--K 336

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           ++G   +G+   +  P     L+  ++ Q+     H++ ++D G L
Sbjct: 337 NIGHGIQGIHPNM--PSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 168/374 (44%), Gaps = 26/374 (6%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP------SAAHVVQVSASEN 60
           R+   ++SN  +++ G S  G LGHG +    +S   ++ P          V+QVS    
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +    +  T G       GH DT + IF P+L+E+L G+P K+++ G + T  L +
Sbjct: 161 HTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G ++  G    G+LG G T D   P+ +  PLE++  + +++ G  +  AVT  G VY+
Sbjct: 220 TGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLGSQHSAAVTKCGKVYT 278

Query: 180 FGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +G G    LGH   G +HD L P+ +    +    +V +S G+ H VAL   G +YTW  
Sbjct: 279 WGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSHSVALSDVGDIYTW-- 332

Query: 237 GYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G    +GHG + I   +P     L++   VQV      +  L D G++            
Sbjct: 333 GMTKNIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIGALV----QKSSETR 388

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            P     D+   P+  D       + + + +   ++   + +L   GD E+ +   D L 
Sbjct: 389 KPQSLAEDQ--EPKKADQSIEEFKTGLDSLIRRKILQGIKDKLKAGGDREKIEYLMDELE 446

Query: 356 GCLEPTEIFIQEME 369
              E   + +  ++
Sbjct: 447 KSEEQNAVLVSLLD 460



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 94  PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 206
           +   +V+Q+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 325
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGH 351
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 13/239 (5%)

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GS  +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 246
           LG G   D L PR   + +    +V++V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 247 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3107

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFIQEME 369
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3137

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737

Query: 345 ERAQ 348
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 20/269 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P   E L  +   QV         L+  G V+T   N+          D   P+ + 
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQ 489

Query: 151 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 206
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 490 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 608

Query: 267 VC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V   +   +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G   ++ +T  G+++ +G  +  +LGH T
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT 694



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4104

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4163

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 240  GALGHG 245
            G LG G
Sbjct: 4281 GQLGDG 4286



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIQALKTKRIRDIAYGSSHSAPL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 244  HG 245
            +G
Sbjct: 3292 NG 3293



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +G VY
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKDGQVY 680

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V++WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEVHSWGSN- 737

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 738 -DQCQHFDTLGVTKPEP 753



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P +   L+    +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDS-KHIVGIACGPAQSFA 776



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 231  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 288  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 345  ERAQLGHDTLRGCLEPTEI 363
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 149

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 150 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 208

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 266

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 267 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 326

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 347
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 327 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 383

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG+ TL     P  +
Sbjct: 384 QLGNGTLESSALPVTV 399



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 21/274 (7%)

Query: 86  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 74  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 126

Query: 146 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 199
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 127 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 185

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLS 257
           + I+  +   +H+V+++ G  H +AL ++G +++WG    G LG G +   ++ LP  +S
Sbjct: 186 KVIK--KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 243

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L       V      +  L  +G+V+ +G    G LG  D+   D+ L P +L  LR+ 
Sbjct: 244 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ--RDR-LHPTVLKPLRSQ 300

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +  +  G  HT  +T  G +F FG     QLGH
Sbjct: 301 RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 334



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 14/300 (4%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 151

Query: 61  HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 152 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 209

Query: 119 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 268

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 326

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G  G LGHG ++++ +P  +  L      Q+ C R         +G +Y FG    G LG
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLG 386



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 146 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 205

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 206 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 265

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 324

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 239
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 325 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 382

Query: 240 GALGHGDEIDKTLP 253
           G LG+G      LP
Sbjct: 383 GQLGNGTLESSALP 396



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)

Query: 231 VYTWGKGYCGALGH---GDEIDK----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           +Y+WG G  G LG     D +D     + PE +    +    +V    + T VL+  GSV
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y  G   FG LG       D+ +R    + +L AH +  ++ G  H++ ++D G++F +G
Sbjct: 113 YSCGANDFGQLG------QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG 166

Query: 343 DNERAQLG 350
            N   QLG
Sbjct: 167 CNRNGQLG 174


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4307

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4308 GSNSEGQLGLGHTNHVREPT 4327



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4212



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2542

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2658

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2716

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 2777 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2477 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2534

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2535 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2593

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2594 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2651

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2652 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 2711

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2712 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 2768

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 2769 GSNSEGQLGLGHTNHVREPT 2788



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2452 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2506

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2507 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2566

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2567 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2624

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2625 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2673



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2452 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2508

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2509 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2565

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 2566 KLGHGNSDRQRRPRQIEALQGEE 2588


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4300

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4301 GSNSEGQLGLGHTNHVREPT 4320



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4205



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4198

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 23/314 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALK 101
           PS +    + A + +  FV+ + G V  CG  S    G  D+N      +L      ++K
Sbjct: 400 PSFSDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
            V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV +
Sbjct: 459 KVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           +AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSH 572

Query: 222 VVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 281 GSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           G VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    
Sbjct: 633 GQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNE 685

Query: 338 LFGFGDNERAQLGH 351
           ++ +G+N   Q G 
Sbjct: 686 VYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4213



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4052

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4168

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4226

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4287 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL  +    VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3987 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4044

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4045 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4103

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4104 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4161

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4162 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4221

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4222 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4278

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4279 GSNSEGQLGLGHTNHVREPT 4298



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3962 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4016

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4017 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4076

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4077 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4134

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4135 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4183



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3962 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4018

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4019 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4075

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4076 KLGHGNSDRQRRPRQIEALQGEE 4098


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 21/305 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTM 347

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G   H  G LGHG  +    PK IA PLE +  +  +A GP +   +T  G +
Sbjct: 348 AGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL-QIAFVACGPWHTALITSTGQL 406

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSGTSI 464

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTM 524

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG     +SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLG---SSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 347 AQLGH 351
            +LGH
Sbjct: 582 GRLGH 586



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +H+  ++ +  +++ G  +   G+LGHG   +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT--- 115
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T   
Sbjct: 394 PWHTALITSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 116 --------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                   G     G + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDY-NFHKIACGHSL 511

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG      ++    +   +  G  +  ++ G  HV  L S
Sbjct: 512 TVGLTTSGRVFTMGSTVYGQLGSSLSDGKVP--CLVGDKIAGESIEEIACGAYHVAVLTS 569

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 56/357 (15%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+     VF+ G    G LGHG       P   + +  T I+F        V+  E
Sbjct: 288 RHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDF--------VACGE 339

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  V  +G+++T GD  +++   GH          R+   L+G+    V  G   T  
Sbjct: 340 FHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTAL 399

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++  +A G  +  AV      
Sbjct: 400 ITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA-VACGVWHTAAVVEVIAT 458

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 459 HSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFH--KIACGHSLTVGLT 516

Query: 227 SSGYVYTWGKGYCGALGH-----------GDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           +SG V+T G    G LG            GD+I     E ++    H+A           
Sbjct: 517 TSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVA----------- 565

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           VL     VY +G    G LG  D  + D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 566 VLTSKNEVYTWGKGANGRLGHGD--IEDRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   +   P+ + 
Sbjct: 266 VLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVE 325

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L    ++  +A G  +  AVT  G +Y++G G +    LGHG       P+ I     +
Sbjct: 326 ALIST-TIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRI-AGPLE 383

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ +  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL     + V 
Sbjct: 384 GLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVA 443

Query: 269 ARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
                T  +V+           +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 444 CGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK---EARLKPTCVSALIDY 500

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           +  +I+ G   TV +T  GR+F  G     QLG     G   CL   +I  + +EE
Sbjct: 501 NFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEE 556



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 23/238 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 47
           +  G +HT LI+++  +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
             A VV+V A+  H+   + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSGTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVSALIDYNFHK 504

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +  G + T  LT  G V T GS  +GQLG   + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLS-DGKVPCLVGDKIAGESIEEIACGAYH 563

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 16/319 (5%)

Query: 42  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
           ++I  PS      A +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR
Sbjct: 16  SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPR 75

Query: 96  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            + AL     K+V   +G      LT+ G V   G    G+LGH   ++   P+ I  L+
Sbjct: 76  QITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALK 135

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
               +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V+
Sbjct: 136 -TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVI 192

Query: 214 RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+    
Sbjct: 193 QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGA 252

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
           + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + 
Sbjct: 253 QFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 309

Query: 332 VTDRGRLFGFGDNERAQLG 350
           VTD G+++ +GDN+  Q G
Sbjct: 310 VTDSGQVYAWGDNDHGQQG 328



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 9/266 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKS 148
            I  P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ 
Sbjct: 17  KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQ 76

Query: 149 IAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
           I  L   V   V + +G  +  A+T +G V+ +G G +  LGH  + +  +PR I+  + 
Sbjct: 77  ITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKT 136

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV
Sbjct: 137 KRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 194

Query: 268 C--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
              +R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G
Sbjct: 195 ACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECG 251

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGH 351
              ++ +T  G ++ +G  +  +LGH
Sbjct: 252 AQFSLALTKSGVVWTWGKGDYFRLGH 277



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+ T L  +  VF  G    G LGH      C     I       +  ++   +H+A +
Sbjct: 94  GRHATALTVDGKVFWWGEGDDGKLGH-FSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 152

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 153 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 270

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG
Sbjct: 271 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWG 320



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 128 GSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G VY+ G  +
Sbjct: 3   GLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEGKVYACGEAT 58

Query: 185 NFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           N  LG G     +  PR I       +  V V +G  H  AL   G V+ WG+G  G LG
Sbjct: 59  NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLG 118

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           H   ++   P  + +LK+     +      +  L  +G +Y +G   +G LG  D     
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ- 177

Query: 304 KVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG     GC  P 
Sbjct: 178 --LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 235

Query: 362 EI 363
            I
Sbjct: 236 NI 237



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 142 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 200

Query: 62  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 201 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 259

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 260 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 318

Query: 180 FGSGSNFCLGHGEQ 193
           +G        HG+Q
Sbjct: 319 WGDND-----HGQQ 327


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 57
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1700

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1816

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1874

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1935 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 1970



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 47   PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1635 PSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1693

Query: 107  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 1694 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 1752

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H +
Sbjct: 1753 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHTL 1810

Query: 224  ALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 1811 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH 1870

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +G
Sbjct: 1871 VYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 1927

Query: 343  DNERAQLGHDTLRGCLEPTEIFI 365
             N   QLG        EPT + +
Sbjct: 1928 SNSEGQLGLGHTNHVREPTLVTV 1950



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1610 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1664

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1665 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1724

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1725 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1782

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1783 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1831



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1610 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1666

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1667 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1723

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 1724 KLGHGNSDRQRRPRQIEALQGEE 1746


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 21/320 (6%)

Query: 51  HVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            V++V+A     H   +   G+V++ G+      GH DTN            KG     +
Sbjct: 190 EVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNV---------CYKGQKVLVI 240

Query: 109 TAGLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQI 161
               +  G     LT  G V++ G+   G+LGHGDT  R  P  +  L  +++G  VV I
Sbjct: 241 VYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHI 300

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
             G +Y  A+T +G ++++G G+   LGHG   D+L P  + + + + +  +   +GD  
Sbjct: 301 VCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQ 360

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+   G V++WG G  G LG G       P+ +  L+    V+VC   + +  L  TG
Sbjct: 361 TLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTG 420

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            ++ +G      LG    G  + +  P+ L+ LR   V  ++ G  H +V+T+ G ++G+
Sbjct: 421 HIWTWGKGDSQRLG---HGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGW 477

Query: 342 GDNERAQLGHDTLRGCLEPT 361
           G N++ QLG  +     +PT
Sbjct: 478 GRNDQGQLGDSSFSTKSDPT 497



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L S   V+S G+   G LGHG +T  C    ++       V        H   +
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKV----LVIVYPYHPEGKHYMAL 254

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIR 121
              G+V++ G+      GH DTN     P LV  L G    +    +  G  ++  +T  
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 179
           G + T G   +G+LGHG + D+ TP  +  L+    V+ I   +G +  LAVT +G V+S
Sbjct: 314 GELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR-RVIDICCGSGDAQTLAVTDDGTVWS 372

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LG G       P+ I   R +G  +VRV  G +  +AL  +G+++TWGKG  
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIID--RLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDS 430

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---F 296
             LGHG E     P+ L  L+    V V        V+ + G VYG+G    G LG   F
Sbjct: 431 QRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSF 490

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
             +  SD  L P     L    +S I+ G   +   T  G
Sbjct: 491 STK--SDPTLMP-----LDGKSISGIACGPAQSFCWTSTG 523



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 89/225 (39%), Gaps = 44/225 (19%)

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L E+G V+Q+A     ++A+T  G VY        C    E      P+ +++   K + 
Sbjct: 144 LGELG-VLQLACAERCLIALTKTGRVY-------MCFYSSESQG---PQLMESLADKEVL 192

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            V      +H +AL S G VY+WG G  G LGHGD                    VC + 
Sbjct: 193 KVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGD------------------TNVCYKG 234

Query: 272 RKTFVLV--------------DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-A 316
           +K  V+V                G VY +G    G LG  D    ++    R L   +  
Sbjct: 235 QKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLG 294

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            HV  I  G  ++  +T  G LF +G     +LGH +    L PT
Sbjct: 295 RHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPT 339


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4314

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4219



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G   +  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFVLTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVF 289



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 145/314 (46%), Gaps = 12/314 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L ++  +VQ+
Sbjct: 84  QNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDI-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+S+G      LG G E   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL--GIPFAQIAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 340 GFGDNERAQLGHDT 353
            FG     QLG  T
Sbjct: 318 SFGLGGNGQLGMGT 331



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 8/292 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVTVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G       G   T      PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G +   + +P+ I  L  +    QIAAG ++   +T +G V+ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGI-PFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG 
Sbjct: 278 STAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G ++ G LG  G E    V    I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVP-RNIKSLSDIQIVQVACGYF 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLPEPLS 257
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGTTSNRKSPFPVK 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G +H+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFVLTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSPFPVK 342


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  GS++ G LG G    + +   R ++F  A++V Q++  EN+   + + G+V++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     GH    +   R +L+  L     +++  G   T  +   G + + G N +GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 137 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 193
               D  +R  P+ I  L     +VQIA G  + +A+T +G +Y++GS     LG G   
Sbjct: 118 LNSVDCTER-VPRMIKVL-GTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             E++P+ I T     + +  ++ G  H + +  SG V++WG+   G LG  D   + LP
Sbjct: 176 TTEIKPKRISTL--AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 254 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G +   + PR + 
Sbjct: 234 CQLRTLRNAKVCYATCGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNTTNEILPRQVM 289

Query: 313 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTP 338



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 9/297 (3%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  +T+ I+    V+SCG++  G LGH     +      ++   A    +++    
Sbjct: 38  QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLD---AFVFRKIACGNC 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V + GQ+F+ G N +   G    +     PR+++ L      Q+  G   +  LT 
Sbjct: 95  HTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN 154

Query: 121 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G ++  GSN  GQLG G  T     PK I+ L  V  +  IA G  + + ++ +G V+S
Sbjct: 155 DGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAV-PIAFIACGGYHTIVISKSGAVFS 213

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG  +      P  ++T R     V   + G+E  V L   G V+T G G  
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRTLRNA--KVCYATCGEEFSVFLTMDGGVFTCGAGMY 271

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 272 GQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)

Query: 2   QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +I  G  HTL ++    +FS G ++ G LG +  + T+ V    I       +VQ++   
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVP-RMIKVLGTNVIVQIACGT 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G+++  G N     G         +P+ +  L  VP   +  G   T  ++
Sbjct: 147 EHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G NT GQLG  D   R  P  +  L     V     G  + + +T +G V++
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRN-AKVCYATCGEEFSVFLTMDGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 238
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G 
Sbjct: 266 CGAGMYGQLGHGNTTNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 239 CGALGHGDEIDKTLPE 254
            G LG+      T P+
Sbjct: 324 AGQLGNRASQSATTPQ 339



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 6/205 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ ++N   +++ GS+  G LG G  TT  +   RI+  +A  +  ++   
Sbjct: 140 VQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   + +SG VF+ G N+    G  D  +    P  +  L+       T G  F+ FLT
Sbjct: 200 YHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNL-PCQLRTLRNAKVCYATCGEEFSVFLT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
           + G V TCG+  +GQLGHG+T +   P+ +  +E +GS V QI+ G  + LA V   G V
Sbjct: 259 MDGGVFTCGAGMYGQLGHGNTTNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRV 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAI 202
           Y++G G    LG+        P+ +
Sbjct: 317 YAWGLGGAGQLGNRASQSATTPQVV 341


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +F PR      G   K+V  G   + FL   G V+TCGSN+ GQLGH     RP      
Sbjct: 22  VFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL 81

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
             +++  V   + G ++ LAV   G V+++G+G    LG G   + ++ PR I+      
Sbjct: 82  DAQKISGV---SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I   +V  G+ H +AL   G ++ WG+   G LG G     TL P+PL SL      Q+ 
Sbjct: 139 IS--QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQIS 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+V+G+G    G LG  D    D+ + P  +  LR+  V  IS G  H
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDE--QDRAV-PCHIKFLRSQKVVYISCGEEH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
           T  +T  G LF FG+  + QLGHD+ R   EP    + E+
Sbjct: 254 TAALTKEGGLFTFGNGSKGQLGHDSTRN--EPLPRRVMEL 291



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 148/300 (49%), Gaps = 12/300 (4%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +V+    H+ F+L  G V+TCG NS   CG    ++   RP LV AL       V+ G  
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNS---CGQLGHDKGGSRPELVGALDAQKISGVSCGQA 94

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +  +  +G V   G+   GQLG G   +    P+ I  L E   + Q+  G  + +A++
Sbjct: 95  HSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNHHCIALS 153

Query: 173 GNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            +G ++ +G  S+  LG G+ +   L P+ +++    GI + ++SAG +H  AL  SG V
Sbjct: 154 KDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSL--CGIPLTQISAGGDHSFALSFSGAV 211

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           + WGK   G LG  DE D+ +P  +  L+S   V +   +  T  L   G ++ FG    
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSK 271

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 350
           G LG  D   ++ +  PR +  L    VSQI+ G  HT+  V   G ++ FG N + QLG
Sbjct: 272 GQLGH-DSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLG 328



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 141/308 (45%), Gaps = 21/308 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQV 55
           ++  G  H+L L+ + SV++CGS+ CG LGH      PE    +   +I+         V
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKIS--------GV 89

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           S  + H+  V + GQVF  G       G       +  PRL++ L      QV  G +  
Sbjct: 90  SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHC 149

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTG 173
             L+  G +   G N+ GQLG G     P+  S  PL+ +  +   QI+AG  +  A++ 
Sbjct: 150 IALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G V+ +G  S   LG  ++ D   P  I+  R +   VV +S G+EH  AL   G ++T
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHTAALTKEGGLFT 265

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFG 292
           +G G  G LGH    ++ LP  +  L      Q+ C R      +  TG +Y FG    G
Sbjct: 266 FGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQG 325

Query: 293 SLGFPDRG 300
            LG   RG
Sbjct: 326 QLGTGIRG 333



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 60
           ++ G+ H+L ++    VF+ G+   G LG G    + V   R+      H + QV    +
Sbjct: 89  VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG-TAEEAVRVPRLIKKLCEHRISQVMCGNH 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   + + GQ+F  G+NSS   G          P+ +++L G+P  Q++AG + +  L+ 
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N+ GQLG  D  DR  P  I  L     VV I+ G  +  A+T  G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTKEGGLFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+GS   LGH    +E  PR +      G  V +++ G  H +A + S+G +Y +G    
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324

Query: 240 GALGHGDEIDKTLPEPLSSLK 260
           G LG G       P P+S+++
Sbjct: 325 GQLGTGIRGSAKSPVPVSNIQ 345



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI+ G  H+  +S S +VF  G +  G LG   E  + V    I F  +  VV +S  E 
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 118
           H A + + G +FT G+ S    GH  T N P+  PR V  L G    Q+  G N T  F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310

Query: 119 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 152
              G ++  G NT GQLG G   +   P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1669

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1785

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1843

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1904 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 1604 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 1661

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 1662 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 1720

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 1721 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 1778

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 1779 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 1838

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 1839 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 1895

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 1896 GSNSEGQLGLGHTNHVREPT 1915



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1579 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1633

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1634 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1693

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1694 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1751

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1752 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1800



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1579 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1635

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1636 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1692

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 1693 KLGHGNSDRQRRPRQIEALQGEE 1715


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 156/312 (50%), Gaps = 15/312 (4%)

Query: 41   FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVE 98
            FT     +     +++A +NHA  +   G V++ G NS      G   T     RP+ + 
Sbjct: 1024 FTPTKVDALPPAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKIN 1083

Query: 99   ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
            A+  V    +  G + +  +   G + + G N +GQLG GD   + TP+ +     + +V
Sbjct: 1084 AISNVAA--IACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV---NAISNV 1138

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
              IAAG  Y LA+T +G V+S+G  S+  LG G+  D   P+ ++       +V  ++AG
Sbjct: 1139 AAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS----NVAAIAAG 1194

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            ++H +AL   G V++WG+   G LG  D  D+  P+P++++ +  A+   A    +F + 
Sbjct: 1195 EDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAIS 1252

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            + G  + +G+   G LG    G       P+ +  +   +V  +S G YH++ +T+ G L
Sbjct: 1253 EEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTEDGAL 1310

Query: 339  FGFGDNERAQLG 350
            + +GDN+  Q+G
Sbjct: 1311 WAWGDNDDGQIG 1322



 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 26/332 (7%)

Query: 41  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRP 94
           FT  N  +      ++A   HA  +   G V++ G NS           +   NRP    
Sbjct: 535 FTPTNVDALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRP---- 590

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
           + + A+  V    +  G + +  L   G   + G N +GQLG GD + + TP+ +  L  
Sbjct: 591 QKINAISNVAA--IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS- 647

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
             +VV +AAG  + LA+T +G ++S+G  +   LG G+      PR +        +VV 
Sbjct: 648 --NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS----NVVA 701

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++AG  H +AL   G V++WG    G LG GD  D+  P+P++++ +  A+ V      +
Sbjct: 702 IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAV--GNNYS 759

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             + + G V+ +G+   G LG    G ++D+    ++   +   +V  +S G  H++ +T
Sbjct: 760 IAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV---IVISNVVGLSAGSSHSIALT 816

Query: 334 DRGRLFGFGDNERAQL-GHDTLRGCLEPTEIF 364
           + G L+ +G+NE  Q+   + +     P ++F
Sbjct: 817 EDGALWAWGNNEAGQIAAEEAIEYIDNPVQVF 848



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V AG  F+  L   G +   G N +GQLG GD  +R TP     L +V +   IA G  +
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA---IAGGDYH 178

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LA T +G V++ G   +  LG    H +  P  +        +V  V+AG+   +AL +
Sbjct: 179 ALAATQSGEVWAMGRNDHGQLGFTGDHAD-APVQVAGLS----NVKSVAAGEFFSLALKN 233

Query: 228 SGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            G V+ WG      LG G   +    P P++ L +  A+   A +R    L + GSV+ +
Sbjct: 234 DGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAW 291

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G  G G LGF D         P  + SL    V+ I++G +H++ +T  G L+ +G+N  
Sbjct: 292 GANGSGQLGFGDFETPKA---PGRVSSLA--DVTAIASGWFHSLALTSDGVLWAWGNNGD 346

Query: 347 AQLGHDTLRGCLEPTEI 363
            +LG D       P ++
Sbjct: 347 GRLGTDATSDQSLPAQV 363



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 23/256 (8%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG----QLGHGDTLDRPTPKSIAPLEEVGS 157
           G P   V AG  F+  L   G V + G+N  G     LG  D +  PT     PL     
Sbjct: 491 GNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----- 545

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGS---NFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
              IAAG  + LA+  +G V+S+G  S         G    E +P+ I        +V  
Sbjct: 546 AASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS----NVAA 601

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++ G  H +AL   G  ++WG  Y G LG GD + KT P  +++L +   V + A  R +
Sbjct: 602 IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSN--VVAMAAGDRHS 659

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L   GS++ +G   +G LG  D   +D    PR ++++   +V  I+ G  H++ +T 
Sbjct: 660 LALTLDGSLWSWGDNTYGQLGLGD---NDHRNTPRKVNAIS--NVVAIAAGYRHSLALTR 714

Query: 335 RGRLFGFGDNERAQLG 350
            G ++ +G+N R QLG
Sbjct: 715 DGSVWSWGNNTRGQLG 730



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 19/256 (7%)

Query: 102  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVV 159
            G P   V AG NF+  L   G + + G N  G   LG G +++  TP  +  L       
Sbjct: 980  GNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP---PAA 1036

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVS 216
            +IAAG ++ LA+  +G V+S+G  S+  LG G       + +P+ I        +V  ++
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS----NVAAIA 1092

Query: 217  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
             G  H +A+   G +++WG  Y G LG GD   KT P+ ++++ +  A  + A +  +  
Sbjct: 1093 CGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAA--IAAGEYYSLA 1150

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            L   GSV+ +G    G LG  D    +   +  +L +     V+ I+ G  H++ +T  G
Sbjct: 1151 LTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSN-----VAAIAAGEDHSLALTRDG 1205

Query: 337  RLFGFGDNERAQLGHD 352
             ++ +G N R QLG D
Sbjct: 1206 SVWSWGRNSRGQLGLD 1221



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 86/311 (27%), Positives = 135/311 (43%), Gaps = 23/311 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           P  +++V V+A    +  +   G ++  G N     G  D +  +  P     L  V   
Sbjct: 114 PVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL-TPSKTPGLSDVA-- 170

Query: 107 QVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAG 164
              AG ++     T  G V   G N HGQLG  GD  D P    +A L  V SV   AAG
Sbjct: 171 -AIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADAPV--QVAGLSNVKSV---AAG 224

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + LA+  +G V+++G+  +  LG G   + +  P  I        ++  ++AG  H +
Sbjct: 225 EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRHAM 280

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           AL   G V+ WG    G LG GD      P  +SSL    A  + +    +  L   G +
Sbjct: 281 ALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTA--IASGWFHSLALTSDGVL 338

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           + +G  G G LG      SD+ L P  + S+   +    + G  H++ +   G ++ +G 
Sbjct: 339 WAWGNNGDGRLG--TDATSDQSL-PAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGG 393

Query: 344 NERAQLGHDTL 354
           N   QLG ++L
Sbjct: 394 NAYGQLGVESL 404



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +A+   + LA+ G+G V+ +G      LG G+  + L P           ++V V+AG  
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRL 127

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             +AL S G ++ WG  Y G LG GD  ++  P     L    A  +            +
Sbjct: 128 FSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA--IAGGDYHALAATQS 185

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G V+  G    G LGF      D    P  +  L   +V  ++ G + ++ + + G ++ 
Sbjct: 186 GEVWAMGRNDHGQLGF----TGDHADAPVQVAGLS--NVKSVAAGEFFSLALKNDGTVWA 239

Query: 341 FGDNERAQLG 350
           +G+NE AQLG
Sbjct: 240 WGNNESAQLG 249


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG 
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLPEPLS 257
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 14/332 (4%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           VF  G S  G L  G  E T  +S   ++      + ++S  E H   V + G++++CG 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 77  NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
           N     GH   R     I    LV +L  +   Q   G  F+  +T  G V + G N  G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 134 QLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           QLG G     +   PK +  L  V +VVQI  G ++ LA+T +G ++S+G      LG G
Sbjct: 124 QLGRGKLSKEEERKPKLMKSLA-VCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 192 EQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H     P+ I   R  GI + ++++G  H   L  S  V+ WGK   G LG  DE DK
Sbjct: 183 SSHSFHDTPQQIVCLR--GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
           + P    SL++   + +   +  T  L   G V+ FG  GFG LG       +++L  R+
Sbjct: 241 SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLG--HNSTQNEILPKRV 298

Query: 311 LDSLRAHHVSQISTGLYHTVVVT-DRGRLFGF 341
           ++ L    +SQ++ G  HTV  +   G+++ F
Sbjct: 299 ME-LMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 15/282 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  P+ V  L+ +  K+++ G   T  +T  G +++CGSN +G+LGH     R    SI 
Sbjct: 25  ILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SID 82

Query: 151 PLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQ 203
            +E V S     V+Q A G  + L +T  G V+S+G      LG G+  + +E +P+ ++
Sbjct: 83  VVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMK 142

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSH 262
           +       VV+++ G  H +AL   G +++WG    G LG G        P+ +  L+  
Sbjct: 143 SL--AVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI 200

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              Q+ +    +F+L  + +V+G+G   FG LG  D    DK   P +  SLR   V  I
Sbjct: 201 PIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDE--YDKS-HPTLCKSLRNQKVMYI 257

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           S G  HTV +T  G +F FG     QLGH++ +  + P  + 
Sbjct: 258 SCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVM 299



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 10/292 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 57
           +I+ G  HTL+++ +  ++SCGS+  G LGH    ++ VS   +      S+  V+Q + 
Sbjct: 41  EISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAG 100

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 116
               +  +  +G+VF+ G N     G    ++   R P+L+++L      Q+T G N   
Sbjct: 101 GSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCL 160

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            LT  G + + G N +GQLG G +     TP+ I  L  +  + QIA+G ++   +T + 
Sbjct: 161 ALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI-PIAQIASGGNHSFILTWSR 219

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+ +G  S   LG  +++D+  P   ++ R +   V+ +S G++H VAL   G V+++G
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQ--KVMYISCGEDHTVALTKEGGVFSFG 277

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 286
            G  G LGH    ++ LP+ +  L   +  QV C R+        +G +Y F
Sbjct: 278 AGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 6/261 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSAS 58
           +Q   G   +L+I+ +  VFS G +  G LG G  + +     ++    A   VVQ++  
Sbjct: 96  IQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCG 155

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            NH   +   G++F+ G N     G   ++     P+ +  L+G+P  Q+ +G N +  L
Sbjct: 156 ANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFIL 215

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T    V   G N+ GQLG  D  D+  P     L     V+ I+ G  + +A+T  G V+
Sbjct: 216 TWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRN-QKVMYISCGEDHTVALTKEGGVF 274

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTWGKG 237
           SFG+G    LGH    +E+ P+ +      G  + +V+ G  H VA   SSG +Y +G G
Sbjct: 275 SFGAGGFGQLGHNSTQNEILPKRVMELM--GSVISQVACGRRHTVAFSPSSGKMYAFGSG 332

Query: 238 YCGALGHGDEIDKTLPEPLSS 258
             G LG GD   +  P P+ S
Sbjct: 333 GSGQLGLGDTSARNSPFPILS 353



 Score = 44.3 bits (103), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 286 FGW----MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           FGW     G  S+GF +      +L P+ +  L+   + +IS G  HT++VT  G+L+  
Sbjct: 5   FGWGRSNDGQLSIGFSEET---SILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSC 61

Query: 342 GDNERAQLGHDTLR 355
           G NE  +LGH   R
Sbjct: 62  GSNEYGELGHSKPR 75


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 23/308 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G  TH  G LGHG  +    P+ ++   E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 225
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 226 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRV 537

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 344 NERAQLGH 351
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 128/293 (43%), Gaps = 22/293 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G YHT  ++ S     +  G+   G+LGHG E +  +            V  +S   
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGA 406

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 117
            H A V  +GQ+FT GD S    GH D     F PR VE L+G+   +V  G+  T    
Sbjct: 407 WHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRGLRTTKVACGVWHTAAAV 465

Query: 118 -----LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
                L+  G         ++T G    G+LGHGD   R  P+ +A L E   + Q+A G
Sbjct: 466 EAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALME-ERICQVACG 524

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
               +A+T  G VY+ GS +   LG    + +L P  ++        V  V+ G  HV  
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIANSF-VEEVACGSYHVAV 582

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           L S   VYTWGKG  G LGHGD   +  P  +  LK      V    + T V+
Sbjct: 583 LTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 28/298 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ + + + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV-SGQMEGIR 398

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--- 268
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 269 ----ARKRKTFVLVDTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
               A       L D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALME 515

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 120/255 (47%), Gaps = 25/255 (9%)

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q      LD   PK++     V  V  IA G  + + VT  G ++S+G  S   LGHG +
Sbjct: 269 QCSLNSKLDALLPKALESTV-VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVE 327

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKT 251
            D   P+ I T    G +V  V+ G+ H  A+  SG +YTWG G    G LGHG E+   
Sbjct: 328 ADVSHPKIIDTL--SGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHW 385

Query: 252 LPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
           +P+ +S     + V  +      T V+   G ++ FG   FG+LG  D   S+    PR 
Sbjct: 386 IPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSN---FPRE 442

Query: 311 LDSLRAHHVSQISTGLYHTVV-------VTDRG--------RLFGFGDNERAQLGHDTLR 355
           +++LR    ++++ G++HT         ++D G        +L+ +GD ++ +LGH    
Sbjct: 443 VETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNE 502

Query: 356 GCLEPTEIFIQEMEE 370
             L P E     MEE
Sbjct: 503 PRLVP-ECVAALMEE 516



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 65  VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 176
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 177 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE--RICQVACGNDLTVALTTA 534

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 225 LDSSGYVYTWGKGYCGALGH------------GDEIDKTLPEPLSSLKSHLAVQVCARKR 272
            D+ G VY WG+G    L                ++D  LP+ L S        +    R
Sbjct: 241 FDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGR 300

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              ++   G ++ +G    G LG    GV   V  P+I+D+L   +V  ++ G YHT  V
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLG---HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 333 TDRGRLFGFGD 343
           T  G L+ +GD
Sbjct: 358 TLSGDLYTWGD 368


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3730

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 3846

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 3904

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3965 GL---GHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 13/322 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3665 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3722

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3723 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3781

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 3782 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3839

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3840 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 3899

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3900 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 3956

Query: 342  GDNERAQLGHDTLRGCLEPTEI 363
            G N   QLG        EPT +
Sbjct: 3957 GSNSEGQLGLGHTNHVREPTVV 3978



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3640 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3694

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3695 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3754

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3755 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3812

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3813 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3861



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 123
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG    L +T     R H
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDREH 742



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3640 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3696

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3697 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3753

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 3754 KLGHGNSDRQRRPRQIEALQGEE 3776


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4200

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4258

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4319 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4019 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4076

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4135

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4193

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4194 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4253

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4254 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4310

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4311 GSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4048

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4049 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4108

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4109 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4166

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4167 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3994 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4050

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4051 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4108 KLGHGNSDRQRRPRQIEALQGEE 4130


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4093

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4209

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4267

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4328 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4363



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL  +    VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4028 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4085

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4086 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4144

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4145 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4202

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4203 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4262

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4263 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4319

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT I +
Sbjct: 4320 GSNSEGQLGLGHTNHVREPTLITV 4343



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4003 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4057

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4058 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4117

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4118 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4175

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4176 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4224



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4003 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4059

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4060 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4116

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4117 KLGHGNSDRQRRPRQIEALQGEE 4139


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 23/314 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALK 101
           PS +    + A + +  FV+ + G V  CG  S    G  D+N      +L      ++K
Sbjct: 400 PSFSDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
            V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV +
Sbjct: 459 KVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           +AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSH 572

Query: 222 VVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 281 GSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           G VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    
Sbjct: 633 GQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNE 685

Query: 338 LFGFGDNERAQLGH 351
           ++ +G+N   Q G 
Sbjct: 686 VYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAASNIDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 227 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 336
             +G V+  G   +G LG P+   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDVEDRKVPTTV 396



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +   GQ+FT GD S    GH +  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 168 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNPNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALR 400



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 31/246 (12%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++     I    V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESLAASNIDF--VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 251 TLPE----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            +P     PL  L+  +A   C     T ++   G ++ FG   FG LG    G    + 
Sbjct: 172 WIPRRISGPLEGLQ--IAYVSCG-TWHTALITSMGQLFTFGDGSFGVLGH---GNVKSIS 225

Query: 307 RPRILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLR 355
            PR ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH    
Sbjct: 226 CPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKE 285

Query: 356 GCLEPT 361
             L+PT
Sbjct: 286 ARLKPT 291



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 39/348 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+  N  VF+ G    G LGHG       P   + ++ + I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDF--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 171
            +T  G + T G  + G LGHG+      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 172 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +G    G LG  D  V D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--VEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 20/285 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESL- 126

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 127 AASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 261
           +  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           +++ G   TV +T  G+++  G++   QLG+    G  CL   +I
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKI 347



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G +HT LI S   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAV 404



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 242 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 137 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 243
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 360 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 417

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 418 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 474

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 475 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 521



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 18/294 (6%)

Query: 71  VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 242 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 299

Query: 190 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++T+G G  G LGHGD 
Sbjct: 300 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 297
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 360 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 419

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 420 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 470



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 27/264 (10%)

Query: 20  SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 66
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 279 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 338

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 121
            +GQ+FT GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 339 SAGQIFTYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 397

Query: 122 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 398 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 456

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 457 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 514

Query: 237 GYCGALGHGDEIDKTLPEPLSSLK 260
           G  G LG GD +D++ P  + +L+
Sbjct: 515 GTEGQLGLGDYVDRSYPTLVEALE 538



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 34/350 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQ 54
           +  G  H  +++    VFS G    G LGH        P+  + ++ TR+          
Sbjct: 220 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVK--------A 271

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           ++    H   V  SG+++  G+ +      G +      F  +L   L G+   ++  G 
Sbjct: 272 IAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGH 331

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T  ++  G + T G  T G LGHGDTL    PK +  L+ V +   IA GP +  A+ 
Sbjct: 332 WHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-IACGPWHTAAIV 390

Query: 173 G----------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
                      +G ++++G      LGH ++  +L P  ++          +VS      
Sbjct: 391 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL--NDFDFAQVSCAKAQT 448

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           + L  +G V+T G    G LG+    D ++      LK+    ++ +      VL   G 
Sbjct: 449 IVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGK 508

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           V+ +G    G LG  D    D+   P ++++L    V  I+ G   T+ +
Sbjct: 509 VFTWGKGTEGQLGLGD--YVDRSY-PTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 274

Query: 218 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 273
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 275 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 333

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 334 TAIISSAGQIFTYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 390

Query: 334 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 361
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 391 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 428



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 177 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 239

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 240 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 298

Query: 295 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 352
           G + D+    +    ++   L    + +I+ G +HT +++  G++F +GD     LGH D
Sbjct: 299 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGD 358

Query: 353 TL 354
           TL
Sbjct: 359 TL 360


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG 
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLPEPLS 257
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144


>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
           purpuratus]
          Length = 861

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 167/340 (49%), Gaps = 23/340 (6%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 60
           I+ G  HT +++    V + G+   G LG G + T   S  R+   P  + V  V+    
Sbjct: 71  ISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATH-TSPQRLRLGPHDSQVAGVACGSR 129

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           H    L++G+ ++CG+N     G+    ++       P  +  +      QV+ G  FT 
Sbjct: 130 HTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEKFTL 189

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           FL   G V  CG+N  GQLG+G   +  +PK   PL+   +V++IAAG  + LAVT  G 
Sbjct: 190 FLFESGQVAGCGANNFGQLGNGTRAEMVSPK---PLDNPENVIRIAAGSCHSLAVTATGE 246

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +Y++G G   C   G + D+L     +T RR   +VV V+ G  H +AL ++G VY+WG 
Sbjct: 247 LYAWGMG-RAC---GSRRDDLLTPQRKTTRRS--NVVGVAGGSGHSLALTANGTVYSWGG 300

Query: 237 GYCGALGHGDEIDK-TLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G  G LGHG+++     PE L+  +L   +A   C       +L D GS+Y   W     
Sbjct: 301 GVDGQLGHGEDVQYLAQPEALADGALPGRVAQVACGDSYSAALLGD-GSLY--MWGKSSH 357

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           +   D+  S KV RP +  SL    ++ ++ G +HT  +T
Sbjct: 358 VIQADQPSSQKVYRP-VGISLNGRSIAMVTCGSWHTAAIT 396



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 17/193 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVR 214
           V  I+ G S+   VTG   V ++G+G++  LG G++     P+ +    R G H   V  
Sbjct: 68  VKHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRL----RLGPHDSQVAG 123

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-----DKTLPEPLSSLKSHLAVQVCA 269
           V+ G  H V    +G  Y+ G  +   LG+   +     ++ LP  L  +     VQV  
Sbjct: 124 VACGSRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSC 183

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
            ++ T  L ++G V G G   FG LG    G   +++ P+ LD+    +V +I+ G  H+
Sbjct: 184 GEKFTLFLFESGQVAGCGANNFGQLG---NGTRAEMVSPKPLDN--PENVIRIAAGSCHS 238

Query: 330 VVVTDRGRLFGFG 342
           + VT  G L+ +G
Sbjct: 239 LAVTATGELYAWG 251



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 16/251 (6%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           K ++ G + T  +T +  V T G+   GQLG GD     +P+ +        V  +A G 
Sbjct: 69  KHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACGS 128

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIH--VVRVSAGDE 220
            + +    NG  YS G+     LG+    + + E Q   +  F R  +H  VV+VS G++
Sbjct: 129 RHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQ--VLPHFLRPIMHRKVVQVSCGEK 186

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             + L  SG V   G    G LG+G   +   P+PL + ++   +++ A    +  +  T
Sbjct: 187 FTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDNPEN--VIRIAAGSCHSLAVTAT 244

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G +Y +G      +G       D +L P+   + R  +V  ++ G  H++ +T  G ++ 
Sbjct: 245 GELYAWG------MGRACGSRRDDLLTPQ-RKTTRRSNVVGVAGGSGHSLALTANGTVYS 297

Query: 341 FGDNERAQLGH 351
           +G     QLGH
Sbjct: 298 WGGGVDGQLGH 308



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS--SLKSHLAVQVCA 269
           V  +S G  H   +     V TWG G  G LG GD+   T P+ L      S +A   C 
Sbjct: 68  VKHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACG 127

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLRPRILDSLRAHHVSQISTGLY 327
             R T V ++ G  Y  G   +  LG+  R     +  + P  L  +    V Q+S G  
Sbjct: 128 -SRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEK 186

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            T+ + + G++ G G N   QLG+ T    + P  +
Sbjct: 187 FTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPL 222


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4078

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4194

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4252

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4013 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4070

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4071 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4129

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4130 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4187

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4188 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4247

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4248 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4304

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4305 GSNSEGQLGLGHTNHVREPTLVTV 4328



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3988 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4042

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4043 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4102

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4103 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4160

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4161 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4209



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3988 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4044

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4045 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4101

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4102 KLGHGNSDRQRRPRQIEALQGEE 4124


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 9/257 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSA 57
           + ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+ 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVAC 144

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGV 263

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGK 236
           ++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G 
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 321

Query: 237 GYCGALGHGDEIDKTLP 253
           G  G LG G   ++  P
Sbjct: 322 GGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4208

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4261

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAW 4318

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4319 GSNSEGQLGLGHTNHVREPT 4338



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4056

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4057 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4116

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4117 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4174

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4175 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4223



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4058

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2735

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2851

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2909

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2970 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2670 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2727

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2728 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2786

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2787 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2844

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2845 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 2904

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2905 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 2961

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 2962 GSNSEGQLGLGHTNHVREPTLVTV 2985



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2645 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2699

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2700 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2759

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2760 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2817

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2818 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2866



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2645 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2701

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2702 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2758

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 2759 KLGHGNSDRQRRPRQIEALQGEE 2781


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  125 bits (314), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 11/300 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           +++S  + H A V ++G++F  G N+    G   T   + +P  V+ALK    K    G 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALKSERVKLTACGR 97

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A+T
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G +Y +G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G +Y
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           T+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG   
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTEN-EVYSFGLGQ 271

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG        ++  PR+++  R   V   + G  HT ++TD G L+ FGD    +LG
Sbjct: 272 FGQLGHGTFIFESRL--PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score =  100 bits (249), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 37/348 (10%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ----- 54
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT       +N P+    ++     
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT-------VNKPTCVKALKSERVK 91

Query: 55  -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAG 111
             +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG
Sbjct: 92  LTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAG 149

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 170
            N +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAF 205

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           VT +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL + 
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TE 261

Query: 229 GYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG
Sbjct: 262 NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 288 WMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 8/185 (4%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G  +  D     A   F  K    +R+S GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFADN----APSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67

Query: 242 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG G +     P  + +LKS  + +  C R   T V    G++Y  G    G LG  D  
Sbjct: 68  LGLGTKTTVNKPTCVKALKSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D+     +    +   +  ++ G   +  +T  GRL+ +GDN   Q+G       L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTP 184

Query: 361 TEIFI 365
            E+ +
Sbjct: 185 QEVSV 189



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 8/196 (4%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  + + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLT--ACG 96

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 277
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G +Y +G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMWGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 338 LFGFGDNERAQLGHDT 353
           L+ FG+ +  +LG  T
Sbjct: 212 LYTFGEKDSGKLGLST 227


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4086

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSSDG 4202

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4260

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4321 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      +++ 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4021 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4078

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4079 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4137

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4138 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4195

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ S G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4196 LAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4255

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4256 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4312

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4313 GSNSEGQLGLGHTNHVREPTLVTV 4336



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3996 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4050

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4051 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4110

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4111 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4168

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4169 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLG 4217



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3996 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4052

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4053 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4109

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4110 KLGHGNSDRQRRPRQIEALQGEE 4132


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 178/379 (46%), Gaps = 29/379 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSA 57
           Q+  G  H++++ +   V+S G +  G LG G    +   C+    I+      + Q + 
Sbjct: 153 QVIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCL----ISSLQGIRITQAAV 208

Query: 58  SENHAAFVLQSGQVFTCG-DNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFT 115
                  V  +G V+T G D   +   +  +N   +  P+L+E+LKGV   Q + G  F+
Sbjct: 209 GLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFS 268

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGN 174
             L+  G V+T       +LGH   L    P+ ++ PL++V  V QIAAG  Y+L ++ +
Sbjct: 269 AVLSREGRVYTFSWGRAERLGHSSELSDVEPRLLSGPLDDV-LVAQIAAGNCYLLLLSYH 327

Query: 175 GV---VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
                VYS G G    LGHG +  E  P+ I  F+   I  + +SAG  H   +   G V
Sbjct: 328 PTGMSVYSLGCGLGGKLGHGNKDFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRV 387

Query: 232 YTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +TWG    G LGHGD  D  TLP  +  L +  AV V A +  TFV+ D G VY FG+ G
Sbjct: 388 FTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKAVHVSAGEWCTFVVADNGDVYSFGFRG 447

Query: 291 FGSLGFPDRGVSDK-VLRPR---ILDSLRAHHVSQISTGLY---------HTVVVTDRGR 337
             +LGF D    ++ VL P+   +L  L    V    T  Y         HTV + + G 
Sbjct: 448 SHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISPTSAYNWNNAEQPHHTVALAESGI 507

Query: 338 LFGFGDNERAQLGHDTLRG 356
           ++ FG     QLG   + G
Sbjct: 508 VYAFGGGSMGQLGVKLVEG 526



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 3/158 (1%)

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
           + +RR+   V+   AG  H + + + G VY++G    G LG GD  +K  P  +SSL+  
Sbjct: 145 KNYRREKSQVI---AGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI 201

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              Q     R+T ++ DTGSVY FG   FG L        + V  P++L+SL+   V Q 
Sbjct: 202 RITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQA 261

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           S G Y + V++  GR++ F      +LGH +    +EP
Sbjct: 262 SIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDVEP 299



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 119/261 (45%), Gaps = 15/261 (5%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV AG   +  +T +G V++ G N  GQLG GD  ++  P  I+ L+ +  + Q A G  
Sbjct: 153 QVIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI-RITQAAVGLR 211

Query: 167 YMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + V+  G VY+FG  +   L   G    +    P+ +++   KG+ VV+ S G     
Sbjct: 212 RTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESL--KGVFVVQASIGGYFSA 269

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DT 280
            L   G VYT+  G    LGH  E+    P  LS  L   L  Q+ A      +L    T
Sbjct: 270 VLSREGRVYTFSWGRAERLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPT 329

Query: 281 G-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGR 337
           G SVY  G    G LG  ++   D    P+++   +A ++    IS G +H  V+   GR
Sbjct: 330 GMSVYSLGCGLGGKLGHGNK---DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGR 386

Query: 338 LFGFGDNERAQLGHDTLRGCL 358
           +F +G N    LGH     C+
Sbjct: 387 VFTWGWNSSGCLGHGDSEDCV 407


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G YH+L L  + +V++ G +  G  G     T+  S   +       VV ++A  
Sbjct: 49  IQIAAGNYHSLALKGDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAAGR 103

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + + G V+  G N     G+RD       P  V+ LK V    + AG  ++  L 
Sbjct: 104 YHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLGLK 161

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N   Q+  G   D   P  I  L++   VV IAAG  Y LA+  +G V+ 
Sbjct: 162 KDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTVWM 218

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +    N+        DE  P  +Q    K   VV ++AG  H +AL   G V+ WG  Y 
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWAWGNNYY 276

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG+G   D   P  + +LK    V + A +  +  L   G+++ +G   +G LG    
Sbjct: 277 GQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHSLALKKDGTIWAWGDNEWGQLG---N 331

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            +S+K+  P    SL+   V  I+ G  H++ +   G ++ +G+N   QLG+        
Sbjct: 332 SISEKLCVPVQFKSLK--DVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYV 389

Query: 360 PTEI 363
           P ++
Sbjct: 390 PVQV 393



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 182/402 (45%), Gaps = 68/402 (16%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  GRYH+L L  + +V++ G++  G LG+G       S+  +   +   VV ++A E
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED---SYDPVQVKNLKDVVAIAAGE 306

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  + + G ++  GDN     G+  + + +  P   ++LK V    + AG   +  L 
Sbjct: 307 NHSLALKKDGTIWAWGDNEWGQLGNSISEK-LCVPVQFKSLKDVVA--IAAGCEHSLALK 363

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G+N +GQLG+G+++D   P  +  L++V   V IA G ++ LA+  +G V++
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDV---VAIATGNAHSLALKKDGTVWA 420

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQ----------------TFRRKGI------------- 210
           +G+     LG+G       P  ++                 F++ G              
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG 480

Query: 211 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
                                VV V+AG  H +AL   G ++ WG  Y G L  G++I++
Sbjct: 481 NGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLL--GNDIER 538

Query: 251 T-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           + +P  +  LK    V + A    + VL   G+V+ +G + F  L    R V   V  P 
Sbjct: 539 SFVPVQVKGLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSV--PV 594

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +  L+   V  I+ G +H++ +   G ++ +GDN   QLG+
Sbjct: 595 QIKGLK--DVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGN 634



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 21/303 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQV 108
           VV ++A ++++  + + G V+      ++    R   D   P+  P  VE LK V    +
Sbjct: 197 VVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQVEGLKDVVA--I 252

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            AG   +  L   G V   G+N +GQLG+G + D   P  +  L++V   V IAAG ++ 
Sbjct: 253 AAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDV---VAIAAGENHS 309

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LA+  +G ++++G      LG+        P   ++ +     VV ++AG EH +AL   
Sbjct: 310 LALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLK----DVVAIAAGCEHSLALKKD 365

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V++WG  Y G LG+G+ ID  +P  +  LK    V +      +  L   G+V+ +G 
Sbjct: 366 GTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLALKKDGTVWAWGN 423

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             FG LG    G +     P  +  L+   V  I+ G  H++     G ++ +G+NE  Q
Sbjct: 424 NEFGQLG---NGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQ 478

Query: 349 LGH 351
           LG+
Sbjct: 479 LGN 481



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 27/359 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H+L L  + +V+S G++  G LG+G       S+  +       VV ++   
Sbjct: 350 VAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSID---SYVPVQVRGLKDVVAIATGN 406

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + + G V+  G+N     G+  TN+  F P  V+ LK V    + AG + +    
Sbjct: 407 AHSLALKKDGTVWAWGNNEFGQLGN-GTNKSSFVPVQVKGLKDVVA--IAAGSDHSLAFK 463

Query: 120 IRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             G V   G+N  GQLG+G          P  +  L++V   V +AAG  + LA+  +G 
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDV---VAVAAGSVHSLALKKDGT 520

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 235
           ++++GS  +  LG+  +      R+    + KG+  VV ++AG  H + L   G V+ WG
Sbjct: 521 IWAWGSNYHGLLGNDIE------RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWG 574

Query: 236 KGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           + +   L      +  ++P  +  LK    V + A +  +  L   G+V+ +G   FG L
Sbjct: 575 EVWFDLLNENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQL 632

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G   R      L P  +  L+   +  I+TG +H++ +   G ++ +G+N   QLG++T
Sbjct: 633 GNSPR--EKYSLVPVQVKGLK--DILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNET 687



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 24/357 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I TG  H+L L  + +V++ G++  G LG+G   T   SF  +       VV ++A  
Sbjct: 400 VAIATGNAHSLALKKDGTVWAWGNNEFGQLGNG---TNKSSFVPVQVKGLKDVVAIAAGS 456

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +H+    + G V+  G+N       G     +    P  V+ LK V    V AG   +  
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLA 514

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 175
           L   G +   GSN HG LG+         +S  P++  G   VV IAAG ++ L +  +G
Sbjct: 515 LKKDGTIWAWGSNYHGLLGN------DIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G      L    ++  L   ++    +    VV ++AG+ H + L   G V+ WG
Sbjct: 569 TVWAWGEVWFDLL---NENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWG 625

Query: 236 KGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
             + G LG+      +L P  +  LK  LA+     +  +  +   G+V+ +G    G L
Sbjct: 626 DNFFGQLGNSPREKYSLVPVQVKGLKDILAI--ATGEWHSLAIKKDGTVWAWGENSTGQL 683

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G    G       P  +  ++   V  IS G YH++ +   G ++G+G N R QLG+
Sbjct: 684 GNETSGKDKYSYVPVQVKGIK--DVLAISAGSYHSLALKKDGTVWGWGANARGQLGN 738



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 135/304 (44%), Gaps = 14/304 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV ++A   H+  + + G V+  G+N     G+  +    + P  V+ LK V    + AG
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS-YDPVQVKNLKDVVA--IAAG 305

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            N +  L   G +   G N  GQLG+  +     P     L++V   V IAAG  + LA+
Sbjct: 306 ENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDV---VAIAAGCEHSLAL 362

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             +G V+S+G+     LG+G   D   P  ++  +     VV ++ G+ H +AL   G V
Sbjct: 363 KKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSLALKKDGTV 418

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           + WG    G LG+G      +P  +  LK    V + A    +      G+V+ +G   F
Sbjct: 419 WAWGNNEFGQLGNGTNKSSFVPVQVKGLKD--VVAIAAGSDHSLAFKKDGTVWAWGNNEF 476

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG    G       P  +  L+   V  ++ G  H++ +   G ++ +G N    LG+
Sbjct: 477 GQLGNGSGGYGQYYAVPVQVKGLK--DVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGN 534

Query: 352 DTLR 355
           D  R
Sbjct: 535 DIER 538



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 26/317 (8%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +++Q++A   H+  +   G V+  G N    CG  +++     P  V+ LK V    + A
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESS---IIPVKVKGLKDVVA--IAA 101

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYM 168
           G   +  L   G V   GSN  GQLG+ D  +     SI P++  G   VV IAAG  Y 
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY----SIVPVQVKGLKDVVAIAAGDGYS 157

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDS 227
           L +  +G V+ +G   +  +  G   D   P     F+ KG+  VV ++AG ++ +AL  
Sbjct: 158 LGLKKDGTVWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLALKK 212

Query: 228 SGYVYTW--GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            G V+ W     Y   L  G +    +P  +  LK    V + A +  +  L   G+V+ 
Sbjct: 213 DGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKD--VVAIAAGRYHSLALKKDGTVWA 270

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G   +G LG    G S+    P  + +L+   V  I+ G  H++ +   G ++ +GDNE
Sbjct: 271 WGNNYYGQLG---NGKSEDSYDPVQVKNLK--DVVAIAAGENHSLALKKDGTIWAWGDNE 325

Query: 346 RAQLGHDTLRGCLEPTE 362
             QLG+        P +
Sbjct: 326 WGQLGNSISEKLCVPVQ 342



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 24/253 (9%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L  + ++++ GS+  G+LG+  E     SF  +       VV ++A  
Sbjct: 503 VAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIER----SFVPVQVKGLKDVVAIAAGS 558

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 117
           NH+  + + G V+  G+   +     + +R ++   P  ++ LK V    + AG + +  
Sbjct: 559 NHSLVLKKDGTVWAWGE--VWFDLLNENSRLVYSSVPVQIKGLKDVVA--IAAGEHHSLG 614

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVG--SVVQIAAGPSYMLAVTGN 174
           L   G V   G N  GQLG     + P  K S+ P++  G   ++ IA G  + LA+  +
Sbjct: 615 LKKDGTVWAWGDNFFGQLG-----NSPREKYSLVPVQVKGLKDILAIATGEWHSLAIKKD 669

Query: 175 GVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 232
           G V+++G  S   LG+     D+     +Q    KGI  V+ +SAG  H +AL   G V+
Sbjct: 670 GTVWAWGENSTGQLGNETSGKDKYSYVPVQV---KGIKDVLAISAGSYHSLALKKDGTVW 726

Query: 233 TWGKGYCGALGHG 245
            WG    G LG+G
Sbjct: 727 GWGANARGQLGNG 739


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 16/337 (4%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 58
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 117
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG- 698

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 699 -QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 10/283 (3%)

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           A  V ++ +V+  G NSS       T   I +P++  AL     + + AG   T  ++  
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVE-GTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTD 421

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           G V  CG  ++G+LG GD+ ++ T K +   P   +  V        + LA T  G V+S
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG    +  P+ IQ    +G  VV VSAG  H  A+   G +YTWG+G  
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD   + +P  +  + S++    C       +  D  +V+ FG    G LG  D 
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
             +++V +P+++++L+   + ++  G   ++ +T  G+++ +G
Sbjct: 599 --TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 22/301 (7%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNF 114
            +  FV+ + G V  CG  S    G  D+N      +L      ++K V   + + G   
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--H 469

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT +
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYT 233
           G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V++
Sbjct: 530 GELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---WMG 290
           +G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    +G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GS            LRP++++ L A  +  IS G    + +     ++ +G+N   Q G
Sbjct: 646 CGS-------SEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG 698

Query: 351 H 351
            
Sbjct: 699 Q 699



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 161/355 (45%), Gaps = 21/355 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  L+S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 365 IAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG--VTAIAAGGLH 422

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              ++ SG V+  G N+S   G     D++ P+    L   ++      + AG   T  L
Sbjct: 423 TCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 477

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 478 TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGDYHTCALTGSGGVW 535

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G   +  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG  +
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVSGLTSG---VTVIAAGRFHTCALTSSGGVWCWGANF 592

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   ++T P  +S L S +   + A    T  L  +G V+ +G   +G LG   
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGV-TAIAAGGWHTCALTSSGEVWCWGDNYYGQLG--- 648

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 649 DGTTTNRSTPGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGT 702



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 160/351 (45%), Gaps = 19/351 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L+S+  V+  G +  G LG G +T             A+ V  ++A   H
Sbjct: 416 IAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGL--ASGVETIAAGGWH 473

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 119
              +  SG V+  G N+S   G       I+    V A+ G+P     + AG   T  LT
Sbjct: 474 TCALTSSGGVWCWGRNNS---GQLGDGSTIYHITPV-AVSGLPSGVTAIAAGDYHTCALT 529

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A+T +G V+ 
Sbjct: 530 GSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTS--GVTVIAAGRFHTCALTSSGGVWC 587

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+  +  LG G   +   P A+         V  ++AG  H  AL SSG V+ WG  Y 
Sbjct: 588 WGANFDGQLGDGTTTNRTTPVAVSGLPSG---VTAIAAGGWHTCALTSSGEVWCWGDNYY 644

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G LG    
Sbjct: 645 GQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGWEHTCALTSSGEVWCWGDNYYGQLG---D 700

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 701 GTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 750



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 158/353 (44%), Gaps = 17/353 (4%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 314 IAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG--VETIAAGDYH 371

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 120
              ++ SG V+  G N+S   G   T      P  V  L  GV    + AG   T  L  
Sbjct: 372 TCALMSSGGVWCWGRNNSGQLGD-GTTTARSTPAAVSGLPSGV--TAIAAGGLHTCALMS 428

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+T +G V+ +
Sbjct: 429 SGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS--GVETIAAGGWHTCALTSSGGVWCW 486

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G  ++  LG G     + P A+         V  ++AGD H  AL  SG V+ WG    G
Sbjct: 487 GRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWGYNLSG 543

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   D++ P  +S L S + V + A +  T  L  +G V+ +G    G LG    G
Sbjct: 544 QLGDGTTTDRSTPVAVSGLTSGVTV-IAAGRFHTCALTSSGGVWCWGANFDGQLG---DG 599

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            +     P  +  L +  V+ I+ G +HT  +T  G ++ +GDN   QLG  T
Sbjct: 600 TTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGT 651



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 157/365 (43%), Gaps = 20/365 (5%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ S    C G +  G LG G  TT+         PS   V  ++A   H
Sbjct: 58  IAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG--VTAIAAGNYH 115

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 119
              +  SG V   G N S   G    N   F      A+ G+P     + AG + T  L 
Sbjct: 116 TCALTGSGGVRCWGANYSGQLG----NGLTFGRSTPGAVSGLPSGVTAIAAGGDHTCALM 171

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V+ 
Sbjct: 172 SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS--GVTAIAAGGLHTCALTGSGEVWC 229

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G   +    P A+         +  ++AG  H  AL SSG V+ WG+  
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPSG---MTAIAAGGLHTCALMSSGGVWCWGRND 286

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G + D + P  +S L S +   + A    T  L  +G V+ +G  GFG LG   
Sbjct: 287 SGQLGDGSDTDSSTPVAVSGLPSGV-TAIAAGDYHTCALTGSGEVWCWGGNGFGQLG--- 342

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G +     P  +  L +  V  I+ G YHT  +   G ++ +G N   QLG  T     
Sbjct: 343 DGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARS 401

Query: 359 EPTEI 363
            P  +
Sbjct: 402 TPAAV 406



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 158/363 (43%), Gaps = 17/363 (4%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L+S+  V+  G +  G LG G +T           PS   V  ++A + H
Sbjct: 263 IAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG--VTAIAAGDYH 320

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 120
              +  SG+V+  G N  F      T      P  V  L  GV  + + AG   T  L  
Sbjct: 321 TCALTGSGEVWCWGGNG-FGQLGDGTTTARSTPAAVSGLPSGV--ETIAAGDYHTCALMS 377

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G V+ +
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS--GVTAIAAGGLHTCALMSSGGVWCW 435

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G  ++  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG+   G
Sbjct: 436 GLNNSGQLGDGSDTDSSTPVAVSGLASG---VETIAAGGWHTCALTSSGGVWCWGRNNSG 492

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G  I    P  +S L S +   + A    T  L  +G V+ +G+   G LG  D  
Sbjct: 493 QLGDGSTIYHITPVAVSGLPSGV-TAIAAGDYHTCALTGSGGVWCWGYNLSGQLG--DGT 549

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D+   P  +  L +  V+ I+ G +HT  +T  G ++ +G N   QLG  T      P
Sbjct: 550 TTDRS-TPVAVSGLTSG-VTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTP 607

Query: 361 TEI 363
             +
Sbjct: 608 VAV 610



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 11/251 (4%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L+GV    + AG   T  LT  G V   G N  GQLG G    R TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS--GVT 107

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IAAG  +  A+TG+G V  +G+  +  LG+G       P A+         V  ++AG 
Sbjct: 108 AIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGG 164

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           +H  AL SSG V  WG  Y G LG G   ++  P  +S L S +   + A    T  L  
Sbjct: 165 DHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV-TAIAAGGLHTCALTG 223

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+ +G+  +G LG  D   +     P  +  L +  ++ I+ G  HT  +   G ++
Sbjct: 224 SGEVWCWGYNYYGQLG--DGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVW 280

Query: 340 GFGDNERAQLG 350
            +G N+  QLG
Sbjct: 281 CWGRNDSGQLG 291



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 111/257 (43%), Gaps = 20/257 (7%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  ++ S  V+  G +L G LG G  T +          S   V  ++A   H
Sbjct: 518 IAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG--VTVIAAGRFH 575

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVP--CKQVTAGLNFTG 116
              +  SG V+  G N     G    TNR  P+       A+ G+P     + AG   T 
Sbjct: 576 TCALTSSGGVWCWGANFDGQLGDGTTTNRTTPV-------AVSGLPSGVTAIAAGGWHTC 628

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +G 
Sbjct: 629 ALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGWEHTCALTSSGE 686

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G      LG G   +   P A+         V  ++AG  H  AL  SG V  WG 
Sbjct: 687 VWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCWGN 743

Query: 237 GYCGALGHGDEIDKTLP 253
              G LG G  + +T P
Sbjct: 744 NGDGQLGDGRPLYRTTP 760



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  GR+HT  L S+  V+  G++  G LG G  T +         PS   V  ++A   H
Sbjct: 569 IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG--VTAIAAGGWH 626

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
              +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGWEHTCALT 682

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V  
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGVMC 740

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
           +G+  +  LG G       P  + T    G+++  +
Sbjct: 741 WGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 776


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 11/256 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAA--HVVQVSAS 58
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R N  S A   +VQV+  
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPR-NIKSLADIQIVQVACG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  L
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V+
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 238 YCGALGHGDEIDKTLP 253
             G LG G   ++  P
Sbjct: 323 GNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGE 1853

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 1854 ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK 1913

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + + I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 1914 LGHFSRXNCDKPRLIEALKSRRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1971

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1972 TTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2028

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2029 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2074



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 157/326 (48%), Gaps = 12/326 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA + VQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1825 SALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKK 1884

Query: 108  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      LT  G V + G    G+LGH    +   P+ I  L+    +  IA G 
Sbjct: 1885 VAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGS 1943

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 223
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1944 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTL 2001

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2061

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2062 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 2118

Query: 344  NERAQLGHDTLRGCLEPTEIFIQEME 369
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2119 NDHGQQGNGTTTVNRKPT--LVQGLE 2142



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2923

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 2924 LRGI-EVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             V   +GD   + L     V++WG G  G LG G      +P  + +L    AV+V    
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGS 3042

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3043 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3100 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3128



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 2878 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 2936

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 2937 AHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 2995

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  +      G+  V+V  G +  VAL  SG 
Sbjct: 2996 LTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL--TGLGAVKVECGSQFSVALTKSGA 3053

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3054 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3113

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3114 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L ++  VFS G    G LGH      C     I    +  +  ++   +H+A +
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2067

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2068 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125

Query: 244  HG 245
            +G
Sbjct: 2126 NG 2127



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 2880 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 2938

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 2939 SACVTAAGGLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 2997

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  +  L  +G+ V++  G  + +A+T +G VY+
Sbjct: 2998 EDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGA-VKVECGSQFSVALTKSGAVYT 3056

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3057 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3114

Query: 240  GALGHG 245
            G LG G
Sbjct: 3115 GQLGDG 3120



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G V+  G N  GQLG   G  +  PTP +++A L       Q+  G   + AVT +G +Y
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPA----QLIGGEQTLFAVTADGKLY 2843

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD 2963

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  ++  +G   T+ +T+   ++ +GD +  +LG     G
Sbjct: 2964 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDG 3020

Query: 357  CLEPTEI 363
            C  P ++
Sbjct: 3021 CKVPMKV 3027



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +++  +    V+V      + 
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGLGAVKVECGSQFSV 3046

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3047 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3105

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3106 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3151



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG VY WG  + G LG  +     +P P  +L +    Q+   ++  F + 
Sbjct: 2778 DDWTLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT 2837

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2838 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVI 2921



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 209  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L    AV
Sbjct: 1776 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---AV 1830

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
            QV    +  F +   G VY  G    G LG    GVS   V  PR + +L ++ V +++ 
Sbjct: 1831 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GVSSGTVPVPRQVTALSSYVVKKVAV 1887

Query: 324  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 1888 HSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLI 1928


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 11/256 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAA--HVVQVSAS 58
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R N  S A   +VQV+  
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPR-NIKSLADIQIVQVACG 145

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  L
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL 205

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V+
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVF 264

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 238 YCGALGHGDEIDKTLP 253
             G LG G   ++  P
Sbjct: 323 GNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 331

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              +  +T+ G ++  G N +  G LG G    +  P+ ++ PLE +  V  ++ GP + 
Sbjct: 332 EYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGI-HVSSVSCGPWHT 390

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  +RV+ G  H  A+   
Sbjct: 391 AVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESL--KGLRTMRVACGVWHTAAVVEV 448

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 449 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVA 508

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  +G VY  G   +G LG P    +D  +  R+   L  + V +++ G YH  V+T R 
Sbjct: 509 LTTSGQVYTMGSPVYGQLGNPQ---ADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRT 565

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 566 EVYTWGKGANGRLGH 580



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 27  GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 86
           G+LG G E TQ V           HV  VS    H A V  +GQ+FT GD +    GH D
Sbjct: 355 GLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 414

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQ 134
            +  +  PR VE+LKG+   +V  G+  T  +               G + T G    G+
Sbjct: 415 RSS-VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 473

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LGHGD   R  P  +A L E  S  Q+A G S  +A+T +G VY+ GS     LG+  Q 
Sbjct: 474 LGHGDKEARLVPTYVATLVE-PSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQA 531

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D   P  ++    K   V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P 
Sbjct: 532 DGKVPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 590

Query: 255 PLSSLK 260
            + +LK
Sbjct: 591 IVEALK 596



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 27/307 (8%)

Query: 83  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
           G  D     F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D
Sbjct: 251 GGSDIQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD 310

Query: 143 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPR 200
              PK +  L+   +V  +A G     AVT +G +Y +G  + NF  LG G +  +  PR
Sbjct: 311 VSHPKFVDGLKNF-NVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 369

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            + +   +GIHV  VS G  H   + S+G ++T+G G  G LGHGD    + P  + SLK
Sbjct: 370 KL-SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLK 428

Query: 261 SHLAVQVCARKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
               ++V      T  +V+             G ++ +G    G LG  D+   +  L P
Sbjct: 429 GLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---EARLVP 485

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI----- 363
             + +L      Q++ G   TV +T  G+++  G     QLG+    G + PT +     
Sbjct: 486 TYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLM 544

Query: 364 --FIQEM 368
             F++E+
Sbjct: 545 KNFVEEL 551



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 146/353 (41%), Gaps = 38/353 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 56
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 276 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 329

Query: 57  ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPR-LVEALKGVPCKQVTAG 111
             E  +  V  SG ++  G N+       CG   T    + PR L   L+G+    V+ G
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLSGPLEGIHVSSVSCG 386

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              T  +T  G + T G  T G LGHGD     TP+ +  L+ +   +++A G  +  AV
Sbjct: 387 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGL-RTMRVACGVWHTAAV 445

Query: 172 T------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
                         +G ++++G G    LGHG++   L P  + T         +V+ G 
Sbjct: 446 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSF--CQVACGH 503

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
              VAL +SG VYT G    G LG+     K        L  +   ++        VL  
Sbjct: 504 SLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTS 563

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              VY +G    G LG  D   +D    P I+++L+   V  I  G   T  +
Sbjct: 564 RTEVYTWGKGANGRLGHGD---TDDRNFPSIVEALKDKQVKGIICGTSFTAAI 613



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 18/185 (9%)

Query: 1   MQITTGRYHTLLI-------------SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 47
           M++  G +HT  +             S+  +F+ G    G LGHG +  + V  T +   
Sbjct: 433 MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVP-TYVATL 491

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCK 106
                 QV+   +    +  SGQV+T G       G+   +  +  P  VE  L     +
Sbjct: 492 VEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV--PTRVEGKLMKNFVE 549

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++  G      LT R  V+T G   +G+LGHGDT DR  P  +  L++   V  I  G S
Sbjct: 550 ELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKD-KQVKGIICGTS 608

Query: 167 YMLAV 171
           +  A+
Sbjct: 609 FTAAI 613



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASE 59
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    V  TR+      + V+ ++   
Sbjct: 498 QVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQADGKVP-TRVEGKLMKNFVEELACGA 555

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +    +V+T G  ++   GH DT+   F P +VEALK    K +  G +FT  + 
Sbjct: 556 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 120 IRGHV 124
           +   V
Sbjct: 615 LHKWV 619


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 232 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 137 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 243
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 350 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 407

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 408 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 464

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 465 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 511



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 71  VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 232 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 289

Query: 190 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++ +G G  G LGHGD 
Sbjct: 290 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 297
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 350 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 409

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 410 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 460



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 27/264 (10%)

Query: 20  SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 66
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 269 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 328

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 121
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 329 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 387

Query: 122 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 388 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 446

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 447 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 504

Query: 237 GYCGALGHGDEIDKTLPEPLSSLK 260
           G  G LG GD +D++ P  + +L+
Sbjct: 505 GTEGQLGLGDYVDRSYPTLVEALE 528



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 264

Query: 218 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 273
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 265 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 323

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 324 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 380

Query: 334 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 361
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 381 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 418



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 177 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 229

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 230 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 288

Query: 295 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 352
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 289 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 348

Query: 353 TL 354
           TL
Sbjct: 349 TL 350



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 373

Query: 60  NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 104
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 374 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 432

Query: 105 C-----------------------------------------------KQVTAGLNFTGF 117
           C                                               +++++G +    
Sbjct: 433 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 492

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 493 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 545


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 23/326 (7%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H A V + G++FT G++S    GH   ++   +PRLV++L       V  G   T  ++
Sbjct: 273 SHIALVTRQGEIFTWGEDSGGRLGH-GFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS 331

Query: 120 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           I G ++T G  TH  G LGHG  +    PK +    E   VV IA G  +   +T NG +
Sbjct: 332 ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKL 391

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 225
           ++FG G+   LGHG++     P+ +Q     G   V+V+ G  H  A+            
Sbjct: 392 FTFGDGTLGVLGHGDRESVAYPKELQLL--SGHKAVKVACGVWHTAAIIEVNDQSGSSSN 449

Query: 226 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             SS  ++TWG G    LGH ++     P  +++L  +  +QV      T  L  +G V+
Sbjct: 450 TSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVF 509

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             G   +G LG P    SD  +   + D L+   V +IS G +H  V+T R  L+ +G  
Sbjct: 510 TMGSKAYGQLGNP---TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRG 566

Query: 345 ERAQLGHDTLRGCLEPTEIFIQEMEE 370
              +LGH  +    + T I ++ ++E
Sbjct: 567 ANGRLGHGDIED--QKTPILVEALKE 590



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 29/266 (10%)

Query: 116 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAV 171
           G + I G V   G+++ G LG      +D   PK   PLE   V  V  I  G S++  V
Sbjct: 223 GDVFIWGEVWAEGNSSDG-LGSQVPSKIDMLIPK---PLESDVVLDVNYIEPGVSHIALV 278

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T  G ++++G  S   LGHG   D  +PR + +     +  V  + G+ H  A+  SG +
Sbjct: 279 TRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFV--ACGEYHTCAVSISGDL 336

Query: 232 YTWGKG--YCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           YTWG G    G LGHG ++  ++P+ ++  L+ H  V +      T ++   G ++ FG 
Sbjct: 337 YTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTFGD 396

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-------------R 335
              G LG  DR   + V  P+ L  L  H   +++ G++HT  + +              
Sbjct: 397 GTLGVLGHGDR---ESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSS 453

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPT 361
            +LF +GD ++ +LGH      L+PT
Sbjct: 454 KKLFTWGDGDQYRLGHANKETYLQPT 479



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 16/301 (5%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V+  G++S        +   +  P+ +E+   +    +  G++    +T +G + T G
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWG 288

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 187
            ++ G+LGHG   D   P+ +  L  + SV  +A G  +  AV+ +G +Y++G G++   
Sbjct: 289 EDSGGRLGHGFDKDYGKPRLVDSL-AITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAG 347

Query: 188 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG       P+ + T   +G  VV ++ G  H   + S+G ++T+G G  G LGHGD
Sbjct: 348 ILGHGTDVSHSIPKRV-TGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGD 406

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG-----------FGWMGFGSLG 295
                 P+ L  L  H AV+V      T  +++     G           F W G G   
Sbjct: 407 RESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTW-GDGDQY 465

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
                  +  L+P  + +L  ++  Q++ G   TV +T  G +F  G     QLG+ T  
Sbjct: 466 RLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSD 525

Query: 356 G 356
           G
Sbjct: 526 G 526



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 22/275 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 58
           +  G YHT  +S S     +  G+   G+LGHG + +  +   R+  P   H VV ++  
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIP-KRVTGPLEGHQVVSIACG 378

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  +G++FT GD +    GH D    +  P+ ++ L G    +V  G+  T  +
Sbjct: 379 AWHTALITSNGKLFTFGDGTLGVLGHGD-RESVAYPKELQLLSGHKAVKVACGVWHTAAI 437

Query: 119 -------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
                        +    + T G     +LGH +      P  +A L +  + +Q+A G 
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADY-NFLQVACGH 496

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S  +A+T +G V++ GS +   LG+     ++ P  ++  + +G  V  +S G  HV  L
Sbjct: 497 SLTVALTASGHVFTMGSKAYGQLGNPTSDGKV-PILVRD-KLQGETVEEISCGTHHVAVL 554

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            S   +YTWG+G  G LGHGD  D+  P  + +LK
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALK 589



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + I  G +HT LI SN  +F+ G    GVLGHG    + V++ + +   S    V+V+  
Sbjct: 373 VSIACGAWHTALITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACG 430

Query: 59  ENHAAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
             H A +++             S ++FT GD   +  GH +      +P  V AL     
Sbjct: 431 VWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN-KETYLQPTCVAALADYNF 489

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            QV  G + T  LT  GHV T GS  +GQLG+  T D   P  +    +  +V +I+ G 
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            ++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  ++ G
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKER--HVKNIACG 599


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 230 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 137 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 243
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 348 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 406 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 462

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 463 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 509



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 71  VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 230 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 287

Query: 190 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++ +G G  G LGHGD 
Sbjct: 288 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 297
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 348 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 407

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 408 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 458



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 27/264 (10%)

Query: 20  SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 66
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 267 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 326

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 121
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 327 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 385

Query: 122 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 386 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 444

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 445 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 502

Query: 237 GYCGALGHGDEIDKTLPEPLSSLK 260
           G  G LG GD +D++ P  + +L+
Sbjct: 503 GTEGQLGLGDYVDRSYPTLVEALE 526



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 262

Query: 218 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 273
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 263 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 321

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 322 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 378

Query: 334 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 361
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 379 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 416



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 177 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 227

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 228 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 286

Query: 295 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 352
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 287 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 346

Query: 353 TL 354
           TL
Sbjct: 347 TL 348



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 371

Query: 60  NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 104
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 372 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 430

Query: 105 C-----------------------------------------------KQVTAGLNFTGF 117
           C                                               +++++G +    
Sbjct: 431 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 490

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 543


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 244

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
           +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 360

Query: 176 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 418

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 479 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 179 PSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 237

Query: 107 QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 238 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 296

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H +
Sbjct: 297 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHTL 354

Query: 224 ALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 355 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH 414

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +G
Sbjct: 415 VYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 471

Query: 343 DNERAQLGHDTLRGCLEPTEIFI 365
            N   QLG        EPT + +
Sbjct: 472 SNSEGQLGLGHTNHVREPTLVTV 494



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 154 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 208

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
           GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 209 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 268

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 269 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 326

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
           S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 327 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 375



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 154 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 210

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
           +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 211 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 267

Query: 348 QLGHDTLRGCLEPTEIFIQEMEE 370
           +LGH        P +I   + EE
Sbjct: 268 KLGHGNSDRQRRPRQIEALQGEE 290


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 21/314 (6%)

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGF 117
           EN     L+  ++   G  S    G   T +PI   PR    +     K+V  G N + F
Sbjct: 48  ENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIF 107

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT 172
           L   G V+TCG NT GQLGH     +P        E++G+     ++ +A G S+ LA++
Sbjct: 108 LLEDGEVYTCGVNTKGQLGHEKEGSKP--------EQIGALADQHIIHVACGESHSLALS 159

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  
Sbjct: 160 DQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLALAADGQF 217

Query: 232 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + WG+   G LG G E   +  P+ + SL      QV A    +F L  +G+V+G+G   
Sbjct: 218 FAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNT 277

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG  D    +    P  +  LR   V  IS G  HT V+T  G +F FG     QLG
Sbjct: 278 SGQLGLSDEQDRES---PCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG 334

Query: 351 HDTLRGCLEPTEIF 364
           HD+    + P  + 
Sbjct: 335 HDSFNDEVNPRRVL 348



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 12/302 (3%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL       V  G
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS---KPEQIGALADQHIIHVACG 151

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + +  L+ +G + + G+ + GQLG   T D    P+ I  L +   ++Q++ G  + LA
Sbjct: 152 ESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQ-EMILQVSCGNWHCLA 210

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           +  +G  +++G  S+  LG G++   +  P+ +++    GI + +V+AG  H  AL  SG
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLSG 268

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            V+ WGK   G LG  DE D+  P  +  L++   V +      T VL  TG V+ FG  
Sbjct: 269 AVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAG 328

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQ 348
             G LG      +D+V  PR +  L    VSQI+ G  HT+  V   G ++ FG   + Q
Sbjct: 329 SCGQLG--HDSFNDEV-NPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQ 385

Query: 349 LG 350
           LG
Sbjct: 386 LG 387



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E ++     +I   +  H++ V+  E+H+  +
Sbjct: 102 GNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKP---EQIGALADQHIIHVACGESHSLAL 158

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              G++F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 159 SDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFF 218

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             G N+HGQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 219 AWGQNSHGQLGLGKEFPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNT 277

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           +  LG  ++ D   P  ++  R +   VV +S G +H   L  +G V+T+G G CG LGH
Sbjct: 278 SGQLGLSDEQDRESPCHVKLLRTQ--KVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGH 335

Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 336 DSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLG 387



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 10/267 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 146 IHVACGESHSLALSDQGRLFSWGAGSDGQLGLT-TTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   GQ F  G NS    G          P+ V++L G+P  QV AG   +  L
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 264

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           ++ G V   G NT GQLG  D  DR +P  +  L     VV I+ G  +   +T  G V+
Sbjct: 265 SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVF 323

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLA 264
             G LG G   +   P P   +K H A
Sbjct: 382 IKGQLGSGHTCNLKCPSP---VKGHWA 405


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 12/331 (3%)

Query: 34   ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 93
            + T  VSF   ++      V +  S +      Q   V+  G N     G    ++ I  
Sbjct: 2557 QLTTSVSFLASDWEVLQEQVAIQRSTDTPP---QQSAVYVWGLNDKDQLGGLKGSK-IKL 2612

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
            P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK+I  L 
Sbjct: 2613 PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLS 2672

Query: 154  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
            + V   V + +G  + LA+T +G V+S+G G +  LGHG      +P+ I+  + K I  
Sbjct: 2673 QFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIR- 2731

Query: 213  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 270
              ++ G  H  A+ S+G +YTWG G  G LGHGD I +T P+ + +L     VQV   +R
Sbjct: 2732 -DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSR 2790

Query: 271  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +T  L   G VY +G   FG LG   RG SD    P  +D L    V Q+  G   ++
Sbjct: 2791 DAQTMALTTDGCVYSWGDGDFGKLG---RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSL 2847

Query: 331  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             +T  G ++ +G  +  +LGH       +PT
Sbjct: 2848 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 2878



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 14/318 (4%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 75
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2643 LYACGEGTNGRLGLGDDNNVC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 2702 EGEDGKLGHGNC-ISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760

Query: 136  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 2761 GHGDTITQTRPKLVQAL--VGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 2818

Query: 193  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  P A+   R  G+ V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 2819 SDGCYTPLAVD--RLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 2876

Query: 253  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 2877 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGATSVNRKPSLVH 2933

Query: 313  SLRAHHVSQISTGLYHTV 330
             L    V+++S G  H++
Sbjct: 2934 DLEDARVNRVSCGSSHSI 2951



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 17/320 (5%)

Query: 42   TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 95
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2608 SKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 2666

Query: 96   LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILK 2726

Query: 154  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +Q     G  VV
Sbjct: 2727 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVV 2783

Query: 214  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     +QV    
Sbjct: 2784 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGA 2843

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 2844 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 2900

Query: 332  VTDRGRLFGFGDNERAQLGH 351
            VTD G+++ +GDN+  Q G+
Sbjct: 2901 VTDTGQVYAWGDNDHGQQGN 2920



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 2685 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEILKSKRIRDIACGSGHS 2740

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 120
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALVGQRVVQVACGSRDAQTMALTT 2799

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V++ G    G+LG G +    TP ++  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 2800 DGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTW 2858

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 2859 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 2917 QQGNGATSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 2962

Query: 301  VSDKVLRPRILDSL 314
              D V  P + D L
Sbjct: 2963 NQDPVTFPTVRDPL 2976



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G+   G+LGHGDT+    PK I  L +  ++V IA G +Y  A++ +G +
Sbjct: 162 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLD-KNIVFIACGSTYSAALSASGEL 220

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G G+   LGHG   D L P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 221 YTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 280

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLG-- 338

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 339 -HGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           A   H   + Q G V++ G+      GH DT      P+L+E+L       +  G  ++ 
Sbjct: 154 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIESLLDKNIVFIACGSTYSA 212

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 174
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 213 ALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 271

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 272 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGGQFSAALTAHGEVYTW 329

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 330 GKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
              D  +   V  P +  +L +  V  +++G
Sbjct: 390 ---DPTLGPVVSEPTLCPTLSSKTVIGLASG 417



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 20/286 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L  +  V+S G+   G LGHG +T        I      ++V ++    ++A +
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
             SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T  G 
Sbjct: 215 SASGELYTWGRGNYGRLGHGNFD-DVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 273

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++G G
Sbjct: 274 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G   
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIK--DLSVGTTHILALTEDQFVYGWGRNDYG--- 387

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 288
              +ID TL   +S         +C     KT + + +G    F W
Sbjct: 388 ---QIDPTLGPVVSE------PTLCPTLSSKTVIGLASGPTQSFAW 424



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 2647

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G+ ++  +P+AI    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2648 EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2707

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ I    P+ +  LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 2708 LGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTIT 2767

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                 RP+++ +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2768 QT---RPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYT 2824

Query: 360  PTEI 363
            P  +
Sbjct: 2825 PLAV 2828



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           TP    P+  +G + Q+      ++ ++ NG  Y+   GS          +   P  +  
Sbjct: 93  TPFYCDPIAGLG-IKQLCCTERSLMILSLNGNAYNMYHGS----------ETQYPLRVHG 141

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD +    P+ + SL     
Sbjct: 142 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNI 201

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 323
           V +      +  L  +G +Y +G   +G LG    G  D VL P ++ +L+ H V  ++ 
Sbjct: 202 VFIACGSTYSAALSASGELYTWGRGNYGRLG---HGNFDDVLTPTLVTTLKGHTVVHVAC 258

Query: 324 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 259 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 296



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           +P++ + SH      A  +    L   G VY +G    G LG  D    D+   P++++S
Sbjct: 145 KPITMIASH------ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDE---PKLIES 195

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           L   ++  I+ G  ++  ++  G L+ +G     +LGH      L PT
Sbjct: 196 LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPT 243



 Score = 38.1 bits (87), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 33/69 (47%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3560 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3619

Query: 279  DTGSVYGFG 287
              G VY  G
Sbjct: 3620 ADGKVYSTG 3628


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 159/339 (46%), Gaps = 13/339 (3%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     D
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKD 178

Query: 196 ELQPRA-IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
                A ++     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  P 
Sbjct: 179 LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPS 238

Query: 255 PLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            L S+++ L V+   C  +   F L + G V+  G   +G LG    GVS+  + PR++ 
Sbjct: 239 QLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGVSNNEMIPRMVI 293

Query: 313 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 350
            L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 294 ELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 176
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 177 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 293
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 294 LG 295
           LG
Sbjct: 331 LG 332



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 12/268 (4%)

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 206
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID---KTLPEPLSSLKSHL 263
            +   VV+++ G+ H +AL S G +Y+WG    G LG     D      P  L+++    
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIP 195

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
              +      +F++  + +V+G+G    G LG  D         P  L S+R   V  ++
Sbjct: 196 LATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVRFVT 252

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            G  ++V +T+ G +F  G     QLGH
Sbjct: 253 CGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 113
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 232
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 233 TWGKGYCGALGHGDEIDKTLPE 254
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 124 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 180 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 239 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 358 LEPTEI 363
             P+++
Sbjct: 235 AYPSQL 240



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T  L   
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGVSNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 122 G-HVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           G  V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4314

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G    GQLG GDT D+  P  +  L  VG +  +  G  +  AV  NG +Y++G G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LGHG +     PR ++     G+ +V ++ G  H   + S G +YTWG    G  G
Sbjct: 61  MYGKLGHGNESGHSTPRRVEAL--VGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118

Query: 244 HGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           HGD E  +  P+ L  L     VQ+ A    T  L D    + +G   FG LG    G  
Sbjct: 119 HGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLG---NGTE 175

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
                PR+++SL   +  Q++ G +H+ V+T  G+++ FG  E  QLGH      L+PT 
Sbjct: 176 RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTL 235

Query: 363 I 363
           +
Sbjct: 236 V 236



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 93  RPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P  V+AL+GV     VT G   T  +   G ++T G   +G+LGHG+     TP+ +  
Sbjct: 22  EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEA 81

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 210
           L  + S+V IA G  +   VT  G +Y++G   N   GHG+ +  +  P+ ++  R  G 
Sbjct: 82  LVGL-SIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLE--RLNGK 138

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            VV++SA   H   L      + WG+G  G LG+G E +   P  + SL      QV   
Sbjct: 139 KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACG 198

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              + V+   G +Y FG    G LG  D+      L+P ++++L    V QI+ G  H+V
Sbjct: 199 GFHSAVITRDGKMYTFGGGEHGQLGHADK---VNKLKPTLVEALDGVVVKQITCGWSHSV 255

Query: 331 VVTDRGR 337
            +T  G 
Sbjct: 256 ALTSEGE 262



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 7/230 (3%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            +T G YHT  + SN  +++ G  + G LGHG E+       R+       +V ++    
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTP-RRVEALVGLSIVDIACGSR 95

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    T  LT 
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 179
                  G    G+LG+G   +  +P+ I  L  +G    Q+A G  +   +T +G +Y+
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRDGKMYT 213

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           FG G +  LGH ++ ++L+P  ++     G+ V +++ G  H VAL S G
Sbjct: 214 FGGGEHGQLGHADKVNKLKPTLVEAL--DGVVVKQITCGWSHSVALTSEG 261



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 5/268 (1%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           VFS G    G LG G  + Q              +  V+    H A V  +G ++T G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
                GH + +     PR VEAL G+    +  G   T  +T +G ++T G   +G  GH
Sbjct: 61  MYGKLGHGNESGH-STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 138 GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           GDT   + TPK +  L     VVQ++A   +   +T +   +++G G    LG+G + + 
Sbjct: 120 GDTEGHQYTPKLLERLNGK-KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNC 178

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
             PR I++   K  +  +V+ G  H   +   G +YT+G G  G LGH D+++K  P  +
Sbjct: 179 HSPRLIESLIGK--YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLV 236

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +L   +  Q+      +  L   G  +
Sbjct: 237 EALDGVVVKQITCGWSHSVALTSEGEYH 264


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 169
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 347
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 348 QLG 350
           QLG
Sbjct: 326 QLG 328



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 29/301 (9%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH     +P        E++G+     +V +A G S+ +A++  G ++S+G+GS+
Sbjct: 62  TKGQLGHDCEGSKP--------EQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           G E   +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               P  +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 364 F 364
            
Sbjct: 289 L 289



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E ++     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALAGQHIVHVACGESHSVAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  S
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           +  LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   +  T   V  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H++ +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLA 264
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG    G      +P  + +L   H+  ++ G  H+V ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLG 117

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGL 374
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 22/324 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HA+ V +SG+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG  +    P+ I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 226
            +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGR 337
            +G V+  G   +G LG P+   SD   RP ++ D +   HV Q++ G YH  V+T R  
Sbjct: 316 TSGKVWTMGNSVYGQLGNPN---SDG--RPCLVGDKITNEHVLQVACGSYHVSVLTSRSE 370

Query: 338 LFGFGDNERAQLGHDTLRGCLEPT 361
           +F +G     +LGH  +     PT
Sbjct: 371 VFTWGKGANGRLGHGDIEDQKVPT 394



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD S    GH +  + I  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDY-DFYRVACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           + +T +G V++ G   N   G  G  + + +P  +   +    HV++V+ G  HV  L S
Sbjct: 312 VGLTTSGKVWTMG---NSVYGQLGNPNSDGRP-CLVGDKITNEHVLQVACGSYHVSVLTS 367

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALK 400



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT +G V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P  +S     L V  V      T ++   G ++ FG   FG LG    G    +  PR
Sbjct: 172 WIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNVKSISCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 359 EPT 361
            PT
Sbjct: 289 NPT 291



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGALEGLQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 261
           V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 VAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V     ++   V  G ++ +G      LG  D+   +  L P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLNPTCVASLIDYDFY 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CL 358
           +++ G   TV +T  G+++  G++   QLG+    G  CL
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCL 342



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G +HT LI S   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           +G++FT GD      GH D       P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLNPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+Q+A G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNE--HVLQVACGSYHVS 363

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +T    V+++G G+N  LGHG+  D+  P  ++  + + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSV 404



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V  G  H   +  SG V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 328
            +  T  +  TG +Y +G  G  ++G    G       PR I  +L    V+ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWH 195

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T ++T  G+LF FGD     LGH  ++    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGNVKSISCPREV 230



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +  +G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRSGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 20/266 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 160
           K+V  G N + FL   G V+TCG NT GQLGH     +P        E++G+     +V 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP--------EQIGALAGQHIVH 88

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 219
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGN 146

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H +AL + G  +TWG+   G LG G E   +  P+ + SL      QV A    +F L 
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+G+G    G LG  D    +    P  +  LR+  V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIF 364
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 169
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 347
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 348 QLG 350
           QLG
Sbjct: 326 QLG 328



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 8/292 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E ++     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALAGQHIVHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  S
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           +  LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
               D+  P  +  L      Q+   +  T   V  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLA 264
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           WG    G  G G  I   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG    G      +P  + +L   H+  ++ G  H++ ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG 117

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGL 374
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4018

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4134

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4192

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   +      T  L  TG VY +G    G L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4253 GL---GHTNHVREPTLITILQGKNIRQISAGRCHSAAWT 4288



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL  +    VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3953 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4010

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4011 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4069

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4070 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4127

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4128 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4187

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ +   G ++ +
Sbjct: 4188 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAW 4244

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT I I
Sbjct: 4245 GSNSEGQLGLGHTNHVREPTLITI 4268



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3928 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3982

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3983 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4042

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4043 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4100

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4101 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4149



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3928 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3984

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3985 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4041

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4042 KLGHGNSDRQRRPRQIEALQGEE 4064


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLHDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+  P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 12/324 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R  F     V  V     H  F+L+ G V+TCG N     GH    +   +P  V +L  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 161
                V+ G   T  L  +G V   G  + GQLG     D    P+++  L EV  + Q+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-HITQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 220
           A G  + LA+   G ++S+G      LG G+Q   +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL--QGIPFGQISAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L  SG ++ WG+   G LG GD  D+  P  L +L+S   V +C  +  T  L   
Sbjct: 201 HSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 339
           G V+ FG  G+G LG      ++  + PR +  L    VSQI+ G  HT+  +   G++ 
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKID 317

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            FG     QLG  +    + PT +
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPV 341



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  E  +G   + V  G   T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L +  ++V ++ G ++ LA+   G V+++G GS+  LG     D L+ PR +++     
Sbjct: 80  SL-DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSE-- 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVC 268
           +H+ +V+ G  H +AL   G +++WG+   G LG G +      P+ + SL+     Q+ 
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQIS 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  +G+++G+G   FG LG  D   +D    P +L +LR+  V  I  G  H
Sbjct: 197 AGGAHSFGLTLSGAIFGWGRNKFGQLGLGD---NDDRRFPVLLKTLRSQQVVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 21/320 (6%)

Query: 6   GRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASE 59
           GR HT+ L+ + +V++CG +  G LGH      PE  Q VS        A ++V VS  E
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPE--QVVSL------DAQNIVAVSCGE 93

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   GQVF  G  S    G       +  PR V++L  V   QV  G   +  L 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153

Query: 120 IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G + + G N +GQLG G       +P+ I  L+ +    QI+AG ++   +T +G ++
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGI-PFGQISAGGAHSFGLTLSGAIF 212

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      LG G+  D   P  ++T R +   VV +  G++H  AL   G V+T+G G 
Sbjct: 213 GWGRNKFGQLGLGDNDDRRFPVLLKTLRSQ--QVVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGH     +  P  +  L   +  Q+ C R+     +  +G +  FG  G G LG  
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG-- 328

Query: 298 DRGVSDKVLRPRILDSLRAH 317
            R   +++    +    RAH
Sbjct: 329 TRSTCNRISPTPVKGCWRAH 348


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQMVTSCG 4074

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + + G+  +G+LG G+T ++  P+ ++ LE  +VG   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVG---QVACGLNHTLAVSADG 4190

Query: 176  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            + V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G VYT+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGNVYTF 4248

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ + +L       V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLISALQGKNIQQISAGRCHSAAWT 4344



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 16/341 (4%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 58
           I  G+Y T +IS+  SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 403 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSSSKGS 461

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 117
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 462 DGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 520

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 577

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 635

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 636 GACLGCG-SSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 693

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
                +  + +P+ +  L    + QIS G  H++  T   R
Sbjct: 694 -QGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPR 733



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 23/314 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALK 101
           PS +    + A + +  FV+ S G V  CG  S    G  D+N      +L      A+K
Sbjct: 395 PSFSDAQTIEAGQ-YCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIK 453

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
            V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV +
Sbjct: 454 KVSSSKGSDG--HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 511

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           +AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H
Sbjct: 512 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSH 567

Query: 222 VVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  T
Sbjct: 568 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST 627

Query: 281 GSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           G VY +G    +G GS            LRP++++ L    V  IS G  H + ++    
Sbjct: 628 GQVYAWGCGACLGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNE 680

Query: 338 LFGFGDNERAQLGH 351
           ++ +G+N   Q G 
Sbjct: 681 VYAWGNNSMGQCGQ 694



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 56/330 (16%)

Query: 86   DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
            +  R I  P L  +      +QV  G N T  +   G V  CG  ++G+LG G++ D   
Sbjct: 3997 EAGRNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV 4054

Query: 146  PKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
               I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +PR I+
Sbjct: 4055 LTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4114

Query: 204  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
                +G  VV++S G +H   + S G ++++G G  G LG G+  +K LPE +S+L+ H 
Sbjct: 4115 AL--QGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQ 4172

Query: 264  AVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF--------PDR-------GVS----- 302
              QV C       V  D  +V+ FG   +G LG         P +       G+      
Sbjct: 4173 VGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4232

Query: 303  ------------------DKVL-----------RPRILDSLRAHHVSQISTGLYHTVVVT 333
                              D+++           RP+ + +L    +  ++ G  HT+ ++
Sbjct: 4233 TQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLS 4292

Query: 334  DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              G ++ +G N   QLG        EPT I
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVREPTLI 4322



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G+  HGQL   G  +  PT   +AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VFLWGAGRHGQLAEAGRNILVPT---LAP--SFSQAQQVVCGQNCTFVIQANGTVSACGE 4038

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN--T 4156

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 350
            S+K L P  + +L  H V Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG 4205



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 15/196 (7%)

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           I AG + M++ T    VY +GS S+  L  G Q   LQP+   +F         + AG  
Sbjct: 355 IQAGEAAMVSETCE--VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQY 408

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFV 276
               + S G V   GKG  G LG GD  +++  + L + + H A++  +  +     T  
Sbjct: 409 CTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLA 467

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 335
               G V+ +G   +G LG    G S     P+++   L+   V  +S G  H+  V++ 
Sbjct: 468 FTSEGEVFSWGDGDYGKLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 524

Query: 336 GRLFGFGDNERAQLGH 351
           G L+ +G+ +  +LGH
Sbjct: 525 GELYTWGEGDFGRLGH 540



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 215  VSAGDEHVVALDSSGY----------VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
            VS  DE V++  +S            V+ WG G  G L    E  + +  P  +     A
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQA 4014

Query: 265  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
             QV   +  TFV+   G+V   G   +G LG   +G SD +    ++ +L+   V+Q+ T
Sbjct: 4015 QQVVCGQNCTFVIQANGTVSACGEGSYGRLG---QGNSDDLHVLTVISALQGFVVTQMVT 4071

Query: 325  GLY---HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
                  H++ +T+ G +F +GD +  +LGH        P +I   + EE
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4120


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 19/312 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 112 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             G+VY  G    G LG P     DK +   +   L+   V +IS+G YH   +T +G L
Sbjct: 546 CLGTVYTMGSAVHGQLGNPQ--AKDKSI-AIVGGKLKDEFVKEISSGSYHVAALTSKGSL 602

Query: 339 FGFGDNERAQLG 350
           + +G     QLG
Sbjct: 603 YTWGMGANGQLG 614



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 132/273 (48%), Gaps = 20/273 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           ++ G Y T  +++S  +++ G +  G+  +G   + +Q +  +R++ P +   +  V+  
Sbjct: 364 VSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIP-SRLSGPLNGTSISNVACG 422

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 116
           E H A V  SGQ+FT GD +    GH      I +P+ VE+L G+  K    G   T   
Sbjct: 423 EWHMAIVSTSGQLFTYGDGTFGVLGHGKLE-SISQPKEVESLSGLWVKAAACGPWHTAAI 481

Query: 117 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                    F T  G + T G    G+LGHGD   +  P  +A L +    VQ++ G   
Sbjct: 482 VEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVD-HDFVQVSCGRML 540

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T  G VY+ GS  +  LG+ +  D  +  AI   + K   V  +S+G  HV AL S
Sbjct: 541 TVGLTCLGTVYTMGSAVHGQLGNPQAKD--KSIAIVGGKLKDEFVKEISSGSYHVAALTS 598

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            G +YTWG G  G LG GD  D+  P  + +L+
Sbjct: 599 KGSLYTWGMGANGQLGLGDTEDRNSPAVVEALR 631



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 357 CLEPTEI 363
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 218 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 276 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 332
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 333 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 361
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 353
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 21/305 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       +  G   T  +T+
Sbjct: 291 HAAMVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTM 349

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G   H  G LGHG  +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           ++FG G+   LGHG + +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGNRENIAYPKEVESL--AGLRTIAVACGVWHTAAVVEVIVTQSSSSV 466

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  + +L      ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTM 526

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    +D  +   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 347 AQLGH 351
            +LGH
Sbjct: 584 GRLGH 588



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 21/227 (9%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMT 332

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAV- 265
            +  +  + G+ H  A+  +G +YTWG G  Y G LGHG +I   +P+ +S     L V 
Sbjct: 333 TVDFI--ACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVA 390

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      T ++  TG ++ FG   FG LG  +R   + +  P+ ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNR---ENIAYPKEVESLAGLRTIAVACG 447

Query: 326 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 21/282 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  ++ +  +++ G  +   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 IACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIP-KRISGPLEGLQVASVTCG 395

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGNREN-IAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDF-NFHKIACGHSL 513

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V++ GS     LG+    D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 268
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIAC 613



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 34/346 (9%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+  ++     VF+ G    G LGHG       P   + ++ T ++F        ++  E
Sbjct: 290 RHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDF--------IACGE 341

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H   V  +G+++T GD   +    GH          R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHG+  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA-VACGVWHTAAVVEVIVT 460

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFH--KIACGHSLTVGLT 518

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +SG+V+T G    G LG+     K        L      ++        VL     VY +
Sbjct: 519 TSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTW 578

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G    G LG  D G   K   P ++++L+  HV  I+ G  ++  +
Sbjct: 579 GKGANGRLGHGD-GEDRKT--PTLVEALKDKHVKYIACGANYSAAI 621



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +T G +HT L++++  +F+ G    GVLGHG    + +++ + +   +    + V+    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDFNFHKIA 508

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYHVA 567

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T    VY++G G+N  LGHG+  D   P  ++  + K  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDK--HVKYIACGANYSAAI 621



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 21/300 (7%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           T   +  PR +E+   +    +  G      +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 204
           + +  L  + +V  IA G  +  AVT  G +Y++G G ++   LGHG       P+ I +
Sbjct: 324 RLVESL-AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRI-S 381

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHG+  +   P+ + SL     
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRT 441

Query: 265 VQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           + V      T  +V+            G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           L   +  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEE 558



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 13/128 (10%)

Query: 226 DSSGYVYTWGKGYC-GALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKTF 275
           D+ G VY WG+  C  A+  G + + T         LP PL S        +    R   
Sbjct: 234 DALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACGFRHAA 293

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           ++   G V+ +G    G LG    GV   V++PR+++SL    V  I+ G +HT  VT  
Sbjct: 294 MVTRQGEVFTWGEESGGRLGH---GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMA 350

Query: 336 GRLFGFGD 343
           G ++ +GD
Sbjct: 351 GEIYTWGD 358


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL   G  + WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++  G  + 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+  G    
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + + G+ F  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S    F C G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 353
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 353
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 239
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 240 GALGHGDEIDKTLP 253
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLHDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+  P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 21/346 (6%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4091

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV-------VQIAAGPSYM 168
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G         +Q+A G ++ 
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHT 4210

Query: 169  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LAV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4211 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4268

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G+VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G
Sbjct: 4269 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4329 SNSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 457

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 458 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 515

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 516 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 571

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 572 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 631

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 632 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 685 YAWGNNSMGQCGQ 697



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 697 QGNSTGPITKPKKVSGLDGIAIQQISA 723



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 19/332 (5%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4026 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4083

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4084 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4142

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 214
             G  +   VT +G +++FG+G    LG G   ++  P  +           R   +  ++
Sbjct: 4143 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ 4202

Query: 215  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4203 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4262

Query: 274  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ + 
Sbjct: 4263 SVALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4319

Query: 334  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
              G ++ +G N   QLG        EPT + +
Sbjct: 4320 STGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4001 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4055

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4056 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4115

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4116 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4173

Query: 302  SDKVLRPRILDSLRAHHVS----------QISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + +           Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4174 SNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4232



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 427

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 428 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 486

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 487 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 543



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4001 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4057

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4058 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4114

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4115 KLGHGNSDRQRRPRQIEALQGEE 4137


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 16/267 (5%)

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
           +E    +  +QV  GL     + +   V+T G  + GQLGHGD L R  P+ +  L+   
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKG-K 693

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           S+V+   G  + + V+ NG+V + G GSN CLGHG+     +PR I+      + V  +S
Sbjct: 694 SIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLL--SVDVRAIS 751

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            G  HVVA+ S G V+ WG+G  G LG GDE D   P+ +   +     +V      T  
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTMF 811

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-------------PRILDSLRAHHVSQIS 323
           L D GSV   G      LG   R    + ++             P ++ +L  H    ++
Sbjct: 812 LTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMA 871

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G +HT V+ + G+++ FG N   QLG
Sbjct: 872 VGPHHTSVLVEPGKVYTFGRNLEGQLG 898



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 36  TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP 94
           T  ++ T I  P+   + QV+    H   V     V+T G+ S    GH D   R   +P
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGR--SKP 684

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
            +VEALKG    +   G  F+ F++  G V TCG  ++G LGHGD +    P+ I PL  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           V  V  I+ GP +++AV  +G V+++G G + CLG G++ D   P+ +Q    + + +  
Sbjct: 745 V-DVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI--SEPVFIRE 801

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEID-KTLPEPLSS 258
           V  G +  + L   G V   G      LG                  E+  + +P  + +
Sbjct: 802 VKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRA 861

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L +H A+ +      T VLV+ G VY FG    G LG       D  +  + L S+    
Sbjct: 862 LTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDL-SISDKT 920

Query: 319 VSQISTG-LYHTVVVTDRGRLFGFGDNERAQ 348
           V+ ++ G ++  V +     LF +G   R +
Sbjct: 921 VTMLACGDMFTAVGINSENALFFWGTRYRPK 951



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + Q+A G  +M+ V     VY++G GS   LGHG+     +P  ++    KG  +VR   
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEAL--KGKSIVRACC 700

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           GD   V +  +G V T G G  G LGHGD +  + P  +  L S     +         +
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAV 760

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G V+ +G    G LG  D    +    P+ +       + ++  G+  T+ +TD G 
Sbjct: 761 GSDGEVFAWGRGKHGCLGLGDE---EDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGS 817

Query: 338 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
           +   G+NE  +LG +  +G L   +  +Q++E
Sbjct: 818 VLACGNNENNKLGLNHRQGFLRAMKNLLQKVE 849



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           I + +V+ G EH+V +     VYTWG+G  G LGHGD + ++ PE + +LK    V+ C 
Sbjct: 641 IKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRACC 700

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +  + D G V   G    G LG  D   +    RPR+++ L +  V  IS G +H 
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSAS---RPRLIEPLLSVDVRAISCGPHHV 757

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           V V   G +F +G  +   LG         P E+ I E
Sbjct: 758 VAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISE 795



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 20/248 (8%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 66
           +   +  N  V +CG    G LGHG   +   S  R+  P  +  V  +S   +H   V 
Sbjct: 704 FSVFVSDNGIVMTCGDGSNGCLGHGDWMS--ASRPRLIEPLLSVDVRAISCGPHHVVAVG 761

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G+VF  G     C G  D     F P+ V+  + V  ++V  G++ T FLT  G V  
Sbjct: 762 SDGEVFAWGRGKHGCLGLGD-EEDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGSVLA 820

Query: 127 CGSNTHGQLG--HGDTLDRPTPKSIAPLE----EVGSVVQ---------IAAGPSYMLAV 171
           CG+N + +LG  H     R     +  +E    +V +VV+         +A GP +   +
Sbjct: 821 CGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVL 880

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 230
              G VY+FG      LG G       P  ++        V  ++ GD    V ++S   
Sbjct: 881 VEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFTAVGINSENA 940

Query: 231 VYTWGKGY 238
           ++ WG  Y
Sbjct: 941 LFFWGTRY 948


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 17/341 (4%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            ++  G++  G LG G  E  Q ++ +++ +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 76  DNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
            N     GH   + RP+  P LV+ +      Q+  G   +  LT  G V + G N  GQ
Sbjct: 62  SNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWGDNECGQ 117

Query: 135 LGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           LGH    D    PK++  L    +VVQIA G ++ LA+T  G +Y++GS     LG    
Sbjct: 118 LGHASDQDVVQLPKTVRALVS-KTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTP 176

Query: 194 HDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
            +  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++
Sbjct: 177 SELGQCNAPMLLTTLL--GIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNR 234

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             P  L +L++     V      +  L + G V+  G   +G LG    G     + PR+
Sbjct: 235 AYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFCGNEMLPRM 291

Query: 311 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 350
           +  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 292 VMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLG 332



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 137/315 (43%), Gaps = 43/315 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAAH 51
           QI  G  HTL ++ S  V++CGS+    LGH          PE   CV            
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV------------ 87

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           + Q++    H+  + + GQV + GDN     GH      +  P+ V AL      Q+  G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG----SVVQIAA 163
            N +  LT  G ++  GSN +GQLG        TP  +    AP+         V  IA 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           G ++   ++ +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 202 GGNHSFLISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEF 257

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT- 280
            V L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  +V   
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPAR 317

Query: 281 GSVYGFGWMGFGSLG 295
           G +YGFG    G LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            ++  G+ +HGQLG G   D    TP  + P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKM-PWQPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 181 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           GS     LGH     EL   R +Q        + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYAQLGH-----ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 240 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                +   P +L +L    V  I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 359 EPTEI 363
            PT++
Sbjct: 236 YPTQL 240



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 23/332 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 321

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 322 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 380

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 438

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 439 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 498

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 338
           +G ++  G   +G LG P+    +    PR++ + L    V +++ G YH  V+T  G +
Sbjct: 499 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEV 554

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           + +G     +LGH  +     PT  F++ + +
Sbjct: 555 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 584



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 318 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 376

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 377 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 433

Query: 117 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 434 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 492

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L  
Sbjct: 493 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVACGAYHVAVLTQ 550

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 551 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 583



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 366

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 367 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 426

Query: 269 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 427 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 483

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 484 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 515



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG       P 
Sbjct: 248 DILVPKPLES--NVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPR 305

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + SL       +   +  T  +  TG +Y +G  G  + G    G +     P R+   
Sbjct: 306 LVESLSICNVETIACGEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGP 364

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    VS +S G +HT ++T  G+L+ FGD     LGH        P E+
Sbjct: 365 LEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 414


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 21/312 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V++L  +  K+V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDSLSDIRVKKVACG 364

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYML 169
              T  LT  G V+T G ++   L     +     T K   P+E + S+  IA G  +  
Sbjct: 365 EYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI-SISSIACGEWHTA 423

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A+    
Sbjct: 424 IVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESL--KGLCVRSVACGTWHTAAIIEVS 481

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  T  L 
Sbjct: 482 AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALT 541

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T  G +
Sbjct: 542 NMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSV 597

Query: 339 FGFGDNERAQLG 350
           + +G  E  +LG
Sbjct: 598 YTWGKGENGELG 609



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 22/274 (8%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCG-VLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           ++  G YHT  +++S  V++ G   C  ++  G   +Q ++  + + P     +  ++  
Sbjct: 360 KVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTH-KFSLPVEGISISSIACG 418

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 116
           E H A V   G++FT GD +    GH + +     P+ VE+LKG+  + V  G   T   
Sbjct: 419 EWHTAIVSSCGRLFTYGDGTFGVLGHGNYH-SFSSPKEVESLKGLCVRSVACGTWHTAAI 477

Query: 117 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 478 IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 536

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALD 226
            LA+T  G V++ GS     LG+    D    RA+      K  +V  +S G  HV  L 
Sbjct: 537 TLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 592

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           SSG VYTWGKG  G LG GD  ++  P  + +L+
Sbjct: 593 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALR 626



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + SL      +V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVAC 363

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 320
            +  T  L D+G VY +G              SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGDVYTWG----------KDSCSDLVDEGRIRSQWLTHKFSLPVEGISIS 413

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            I+ G +HT +V+  GRLF +GD     LGH        P E+
Sbjct: 414 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEV 456



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  +A G ++   VT  G VY +G G    LG     D   P+ + +     I V +V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSL--SDIRVKKVAC 363

Query: 218 GDEHVVALDSSGYVYTWGKGYCGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTF 275
           G+ H  AL  SG VYTWGK  C  L   G    + L    S     +++  +   +  T 
Sbjct: 364 GEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTA 423

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 332
           ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +   
Sbjct: 424 IVSSCGRLFTYGDGTFGVLG---HGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEV 480

Query: 333 --------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                   T  G+LF +GD +  +LGH      L PT
Sbjct: 481 SAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 517



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 18/224 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 49
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 415 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHT 474

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +++VSA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 475 AAIIEVSAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 531

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 532 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 589

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T +G VY++G G N  LG G+  +   P  ++  R + +  +
Sbjct: 590 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTI 633



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 13/168 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +Y+T   S   +F+ G +  G LGH     + V  T ++       VQVS        + 
Sbjct: 486 KYNT---STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTLALT 541

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGFLTIRGH 123
             G+VF  G       G+     P  + R V     LK    K ++ G      LT  G 
Sbjct: 542 NMGKVFAMGSAKYGQLGN-----PHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGS 596

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           V+T G   +G+LG GDT +R TP  +  L +   V  I  GPS+ +A+
Sbjct: 597 VYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCGPSFTVAI 643


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 23/308 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G  TH  G LGHG  +    P+ +    E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 225
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 226 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRV 537

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 344 NERAQLGH 351
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 128/293 (43%), Gaps = 22/293 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G YHT  ++ S     +  G+   G+LGHG E +  +            V  +S   
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGA 406

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 117
            H A V  +GQ+FT GD S    GH D     F PR VE L+G+   +V  G+  T    
Sbjct: 407 WHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRGLRTTKVACGVWHTAAAV 465

Query: 118 -----LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
                L+  G         ++T G    G+LGHGD   R  P+ +A L E   + Q+A G
Sbjct: 466 EAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIE-ERICQVACG 524

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
               +A+T  G VY+ GS +   LG    + +L P  ++        V  V+ G  HV  
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIANSF-VEEVACGSYHVAV 582

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           L S   VYTWGKG  G LGHGD   +  P  +  LK      V    + T V+
Sbjct: 583 LTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 28/298 (9%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 211
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ +   + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGIR 398

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--- 268
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 269 ----ARKRKTFVLVDTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
               A       L D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALIE 515

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 65  VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 176
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 177 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE--RICQVACGNDLTVALTTA 534

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 42.7 bits (99), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 225 LDSSGYVYTW--------GKGYCGALGH----GDEIDKTLPEPLSSLKSHLAVQVCARKR 272
            D+ G VY W          G    +G       ++D  LP+ L S        +    R
Sbjct: 241 FDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGR 300

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              ++   G ++ +G    G LG    GV   V  P+I+D+L   +V  ++ G YHT  V
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLG---HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 333 TDRGRLFGFGD 343
           T  G L+ +GD
Sbjct: 358 TLSGDLYTWGD 368


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LG+G  +    PK I+ + E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G    LGHGD+  K  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQVLSMGNTVYGQLGNPR---SDGKL-PCLIEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDVEDRKIPT 394



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 123/273 (45%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ S     +  G+   G+LG+G + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 118
            H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  +
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAAV 251

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   +  P  +A L +     +IA G S 
Sbjct: 252 VEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY-DFCRIACGHSL 310

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G V S G+     LG+     +L P  I+     G HVV+V+ G  HV  L +
Sbjct: 311 TVGLTTSGQVLSMGNTVYGQLGNPRSDGKL-PCLIEDI--MGEHVVQVACGSYHVAVLTN 367

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              V+TWGKG  G LGHGD  D+ +P  + SL+
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLR 400



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++     + +  V+ G+ H  A+ +SG +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 251 TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S  L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 37/347 (10%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  SG+++T GD   N        D +  I + R+   L+G     V+ G   T 
Sbjct: 139 FHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGVLEGHQVAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 172
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 173 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                   +G ++++G G    LGHG++  +L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            +SG V + G    G LG+    D  LP  +  +     VQV        VL +   V+ 
Sbjct: 315 TTSGQVLSMGNTVYGQLGN-PRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFT 373

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           +G    G LG  D  V D+ + P +++SLR   V  I+ G   T  +
Sbjct: 374 WGKGANGRLGHGD--VEDRKI-PTLVESLRDRAVRHIACGSNFTSAI 417



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
            + +V  +A G  +  AVT +G +Y++G G++    LG+G       P+ I     +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGV-LEGHQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  VS G  H   + S G ++T+G G  G LGHG+    + P  + SL     + V    
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 272 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDK---EPKLKPTCVASLIDYDFC 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           +I+ G   TV +T  G++   G+    QLG+    G L
Sbjct: 303 RIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKL 340



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPKLKPTCVASLIDYDFCRIA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 167
            G + T  LT  G V + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQVLSMGNTVYGQLGN----PRSDGKLPCLIEDIMGEHVVQVACGSYH 361

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +  +T    V+++G G+N  LGHG+  D   P  +++ R + +
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAV 404



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + SL       V   +  T  +  +G +Y +G  G  ++G    G       P RI   
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTSGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGV 180

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%)

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           SA D++    DSSG VY WG+  C           +    + D  LP+P   L+S L + 
Sbjct: 26  SAQDDY----DSSGDVYVWGEVICDNTVRVGPDTVIRSTAKADFLLPKP---LESKLVLD 78

Query: 267 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           V    C  K    V    G V+ +G    G LG    G  +  + PR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALV-TKNGEVFTWGEESGGRLGH---GSREDSVHPRLVESLAICNVDIV 134

Query: 323 STGLYHTVVVTDRGRLFGFGD 343
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTSGELYTWGD 155


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 8/251 (3%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAA 163
           V  G   T  L   G V +CG N+ GQLG     G       P+ I  LE    VV ++ 
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALE-TQKVVHVSC 100

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  + LAV   G VYS+G+G+   LG GE  D L P+ I    +    V++V+ G +H +
Sbjct: 101 GKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSK--YKVIQVACGHDHSI 158

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           AL + G +++WG+   G LG G +I  +  P+ +S+L      QV A    +F L  +G 
Sbjct: 159 ALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGV 218

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           VYG+G      LG       +++ +P  + +LR+  V+ +S G  HT V+T  G ++ FG
Sbjct: 219 VYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFG 278

Query: 343 DNERAQLGHDT 353
           D+   QLG ++
Sbjct: 279 DDSAGQLGRNS 289



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 14/304 (4%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 103
           P+   VV V+  E H   +   G V +CGDNS    G R      +  + P L++AL+  
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ 93

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
               V+ G   +  +  +G V++ G+ T GQLG G+  DR  PK+I  L +   V+Q+A 
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVAC 152

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + +A+T +G ++S+G   +  LG G+    +  P+ +      GI + +V+AG  H 
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL--DGIPLAQVAAGGAHS 210

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKT---LPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            AL  SG VY WG+     LG      K     P  +++L+S     V      T VL  
Sbjct: 211 FALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRL 338
            GSVY FG    G LG      S     P+ ++ +    VS ++ G YHT+V ++  G+L
Sbjct: 271 NGSVYTFGDDSAGQLG--RNSSSSPKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQL 327

Query: 339 FGFG 342
             FG
Sbjct: 328 LSFG 331



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 19/238 (7%)

Query: 124 VHTCGSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           ++  G  + GQLG        G    RP P+  AP ++  +VV +A G  + L +  +G 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPR--APADQ--AVVLVACGERHTLLLRDDGG 57

Query: 177 VYSFGSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           V S G  S   LG     G++     P  IQ    +   VV VS G EH +A+ + G VY
Sbjct: 58  VASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ--KVVHVSCGKEHSLAVCNKGRVY 115

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           +WG G  G LG G+  D+ +P+ +++L  +  +QV      +  L + G ++ +G    G
Sbjct: 116 SWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHG 175

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            LG   + +S +   P+ + +L    ++Q++ G  H+  ++  G ++G+G N   QLG
Sbjct: 176 QLGL-GKDISSQA-SPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLG 231



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G+ H+L + N   V+S G+   G LG G    + +  T IN  S   V+QV+   
Sbjct: 96  VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKT-INALSKYKVIQVACGH 154

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G++F+ G N     G          P+ V AL G+P  QV AG   +  L+
Sbjct: 155 DHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           + G V+  G N   QLG      +     P SIA L  +  V  ++ G  +   +T NG 
Sbjct: 215 LSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSL-DVAFVSCGAEHTAVLTQNGS 273

Query: 177 VYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTW 234
           VY+FG  S   LG +     +  P+ ++        V  ++ G  H +V + +SG + ++
Sbjct: 274 VYTFGDDSAGQLGRNSSSSPKFGPQKVEWIDGP---VSLLACGSYHTLVRISTSGQLLSF 330

Query: 235 GKG 237
           G+G
Sbjct: 331 GRG 333



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +Y WG+G  G LG G     + P P      +      V V   +R T +L D G V   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 287 GWMGFGSLG--FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G    G LG   P  G   +   P ++ +L    V  +S G  H++ V ++GR++ +G  
Sbjct: 62  GDNSRGQLGRRLPS-GQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAG 120

Query: 345 ERAQLGHDTLRGCLEPTEI 363
              QLG   L   L P  I
Sbjct: 121 TFGQLGTGELGDRLIPKTI 139


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4026

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4142

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4200

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4261 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3961 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4018

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4019 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4077

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4078 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4135

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4136 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4195

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4196 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4252

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4253 GSNSEGQLGLGHTNHVREPT 4272



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3990

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3991 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4050

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4051 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4108

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4109 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4157



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3936 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3992

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3993 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4049

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4050 KLGHGNSDRQRRPRQIEALQGEE 4072


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 139
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 25/377 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN---HVIDIHSGVR 93

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 119
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G N +G+LG+G T  + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G   +   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGL----TDVMAIAAGGSHSLAIRQDGTVWAWGNNTY 263

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSN 321

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 356
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   QLG   ++  RG
Sbjct: 322 ASS---LIPVPVTGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRG 376

Query: 357 CLEPTEIFIQEMEEDTG 373
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  124 bits (310), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 15/309 (4%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V V+    H A +   G++FT G+NS    GH  +  +    PR VE  K  P   ++ G
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
               +  +     +++ GS+ +GQLGHG    +  PK I        V+ IA G ++ + +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSS 228
              +G +++FG   +  LG G   +   P  I+T    GIH   +  ++AG  H +    +
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 229  GYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            G +Y+WG    G LGHG+ I+K+L P+ +  LK    +++      T  + +  SVY +G
Sbjct: 1215 GDIYSWGANSKGQLGHGN-IEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWG 1273

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT------DRGRLFGF 341
                  LG    G +   L P++++      + ++  GLYHT  VT      DRG ++  
Sbjct: 1274 QGEHMCLG---NGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYIC 1330

Query: 342  GDNERAQLG 350
            G  E  +LG
Sbjct: 1331 GGGEHGKLG 1339



 Score =  118 bits (295), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 30/388 (7%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
            + +  G  H  +IS +  +F+ G++  G LGHG    +  S  R +    ++ ++ +S  
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF 117
              H+  V QS Q+++ G +     GH     P   P+ +E   G      +  G   T  
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMV 1153

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTG 173
            L   G + T G N  GQLG G+  +R  P  I   E VG     +  IAAG S+ +    
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLD 1213

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            NG +YS+G+ S   LGHG     L+P+ I     KG  ++++S G  H VA+     VY 
Sbjct: 1214 NGDIYSWGANSKGQLGHGNIEKSLRPKQIDEL--KGKPIIKISCGHFHTVAISELNSVYC 1271

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLV-----DTGSVYGFG 287
            WG+G    LG+G   ++  P+ +   +   +   VC       V       D G+VY  G
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331

Query: 288  WMGFGSLG--------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
                G LG        F D+        P ++ SL + ++   S+G   + ++T+ G L+
Sbjct: 1332 GGEHGKLGTGGDLKTPFFDKP------HPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385

Query: 340  GFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             +G     Q+G+        PT+I + +
Sbjct: 1386 TWGYGNFGQIGNGKTEDMWLPTKISLND 1413



 Score =  111 bits (277), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 14/232 (6%)

Query: 139  DTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
            D L  P P    PL +     V +A G  ++  ++ +G ++++G+ S   LGHG    + 
Sbjct: 1018 DLLLNPMP----PLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKY 1073

Query: 198  Q--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
            Q  PR ++TF+   I  + +S G EH VA+D S  +Y+WG    G LGHG    + LP+ 
Sbjct: 1074 QSTPRRVETFKSSPI--IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKK 1131

Query: 256  LSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRIL 311
            +        V   A     T VL  +G ++ FGW   G LG   F +R V  ++    I+
Sbjct: 1132 IEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIV 1191

Query: 312  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              +    ++ I+ G  H+++  D G ++ +G N + QLGH  +   L P +I
Sbjct: 1192 -GIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQI 1242



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGP 165
            V  G      ++  G + T G+N+ GQLGHG  + +   TP+ +   +    ++ I+ G 
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKS-SPIIMISCGG 1095

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + +AV  +  +YS+GS     LGHG    +  P+ I+ F   G  V+ ++ G  H + L
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFT-GGQKVLAIATGYAHTMVL 1154

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-----LKSHLAVQVCARKRKTFVLVDT 280
              SG ++T+G    G LG G+  ++ +P  + +     +       + A    + + +D 
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            G +Y +G    G LG    G  +K LRP+ +D L+   + +IS G +HTV +++   ++ 
Sbjct: 1215 GDIYSWGANSKGQLG---HGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYC 1271

Query: 341  FGDNERAQLGHDTLRGCLEPT--EIFIQEMEE 370
            +G  E   LG+ + +  L P   E FI +  E
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIE 1303


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4205

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4220



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4198

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4213



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 268
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 180 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G +   +  P+ I++    GI  ++++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++ G  HTL +++   V++ G    G LG  G E  +C+   R I   S   +VQV+   
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGY 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++ +VF  G N     G     +    P+L+++L G+P  Q+ AG   +  LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFT 265

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
           FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 239 CGALGHGDEIDKTLP 253
            G LG G   ++  P
Sbjct: 324 NGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +Q++A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALT 258

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            +A  +++  AS   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 1129 NAGSLIRKKASGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 1186

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 165
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 1187 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGG 1246

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A+
Sbjct: 1247 RHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAI 1304

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 283
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1364

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G 
Sbjct: 1365 FSWGDGDFGKLG---RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGR 1421

Query: 344  NERAQLGHDT 353
             +  +L  D+
Sbjct: 1422 GDFGELRPDS 1431



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    + AG 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDIAAGG 2319

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T+ G +++ G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 2320 AHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 2378

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2379 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 2436

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 2437 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 2497 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 2533



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 2306

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV IAAG ++   +T  G +YS+G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2307 LRGI-EVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 2425

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 2426 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 2483 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 2511



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+    NS       DT      P+LV+ L      +V A 
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DT----LGPQLVQGLASRNIVKVAAH 206

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 266

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 324

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 384

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 385 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 441

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 442 DQCQ-HFDTLR 451



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 13/251 (5%)

Query: 119  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G
Sbjct: 1146 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEG 1201

Query: 176  VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             VY+ G  +N  LG G     +  PR I       +  V V +G  H +AL   G V++W
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 1261

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+G  G LGH   ++   P  + +LK+     +      +  +  +G +Y +G   +G L
Sbjct: 1262 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 1321

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHD 352
            G  D       L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG  
Sbjct: 1322 GHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1378

Query: 353  TLRGCLEPTEI 363
               GC  P  I
Sbjct: 1379 GSEGCNVPQNI 1389



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 262

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 263 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 321

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 322 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 380

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V++W
Sbjct: 381 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEVHSW 438

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T P+P
Sbjct: 439 GSN--DQCQHFDTLRITKPQP 457



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     +       VV ++A   H
Sbjct: 2263 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGIEVVDIAAGGAH 2321

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G +++ G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 2322 SACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 2380

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 2381 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 2439

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 2440 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 2497

Query: 240  GALGHG 245
            G LG G
Sbjct: 2498 GQLGDG 2503



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2226

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+  
Sbjct: 2227 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAE 2286

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD 2346

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2347 ---SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2403

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 2404 CKVPMKI 2410



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY     S          D L P+ +Q    + I  V   +
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS----------DTLGPQLVQGLASRNIVKVAAHS 207

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 208 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 267

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 268 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 324

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 361



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1246 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGRG 1422



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 2429

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2430 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 2488

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 2489 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 2534



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 435 VHSWGSNDQCQ--HFDTLRITKPQPSALPGL-DTKHIVGIACGPAQSFA 480



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2161 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2220

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   V +++  +G  H + ++  G
Sbjct: 2221 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277

Query: 337  RLFGFGDNERAQLGHDTLRGCLEP 360
             ++ +G+ E  +LGH     C  P
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRP 2301



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 34/252 (13%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1352

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1353 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 1411

Query: 120  IRGHVHTCGSNTHGQL-------GHGDTLDRPTPKS----IAPLEEVGSVVQIAAGPSYM 168
              G V T G    G+L         G+  DR   ++    + PL   G V     G   +
Sbjct: 1412 KSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIV 1471

Query: 169  LAVTGNGV----------------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
                 +G+                VY++G   +   G+G      +P  +Q    +G  +
Sbjct: 1472 GIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKI 1529

Query: 213  VRVSAGDEHVVA 224
             RV+ G  H VA
Sbjct: 1530 TRVACGSSHSVA 1541


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 168/357 (47%), Gaps = 19/357 (5%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + + + ++  G++  G LG G  E  Q ++ +++ +   + + QV+    H  F+  SG+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+ CG N     GH   + P  RP L+  L      Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117

Query: 131 THGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
             GQLG     D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQLVS-KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 190 HG---EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
                E     QP  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  D
Sbjct: 177 VNTPKEVTHSNQPVRLTTLL--GIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLND 234

Query: 247 EIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           E  ++ P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G    
Sbjct: 235 ETSRSYPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGAYGQLG---HGFGAN 289

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            + PR++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG  + +    P
Sbjct: 290 EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLP 346



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 25/306 (8%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL +++S  V++CGS+    LGH   T + +    +       VVQ++    
Sbjct: 44  QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPEL---LDYVVVQIACGSR 100

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQV + GDN     G       +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVG----SVVQIAAGPSYMLAVT 172
            G +++ GSN +GQLG        TPK +     P+         V  IA G ++   ++
Sbjct: 161 CGELYSWGSNIYGQLGVN------TPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS 214

Query: 173 GNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  V  FG G N C  LG  ++     P  ++T R  G+    V+ GDE  V L + G 
Sbjct: 215 KSSAV--FGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGG 270

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 289
           V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG  
Sbjct: 271 VFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLG 330

Query: 290 GFGSLG 295
             G LG
Sbjct: 331 SSGQLG 336



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 8/249 (3%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           +T    ++  G+ +HGQLG G   D    TP  + P     ++ Q+A G  + L +T +G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQV-PWTPDSAIKQVACGHRHTLFLTSSG 59

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VY+ GS  +  LGH    D    R +         VV+++ G  H +AL   G V +WG
Sbjct: 60  RVYACGSNDHSQLGH----DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWG 115

Query: 236 KGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
              CG LG   + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G L
Sbjct: 116 DNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G           +P  L +L    V+ I+ G  H+ +++    +FG+G N   QLG +  
Sbjct: 176 GVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDE 235

Query: 355 RGCLEPTEI 363
                PT++
Sbjct: 236 TSRSYPTQL 244



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ +IS SS VF  G + CG LG   ET++    T++       V  V+  +  
Sbjct: 203 IACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYP-TQLKTLRTLGVRFVACGDEF 261

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 120
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           RG V+  G  + GQLG   T     P+ +
Sbjct: 321 RGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 14/278 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKP--RKKPEHVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G S+ LA+   G ++S+G GS+  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 266
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           + A    +F +  +G+V+G+G   FG LG  D   +D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGRNKFGQLGLND--TNDRWF-PALLKSLRSQRVIYVSCGE 251

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVF 289



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 145/311 (46%), Gaps = 12/311 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           +  F     V  V     H  F+L  G V+TCG N     GH    +P  +P  V AL  
Sbjct: 27  KCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHE---KPRKKPEHVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 161
                V+ G + T  L  +G + + G  + GQLG  +  +    P++I  L +V  + Q+
Sbjct: 84  QIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDV-QIAQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 220
           A G  +  A++  G V+S+G      LG G     +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSL--QGIPFAQLSAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  A+  SG V+ WG+   G LG  D  D+  P  L SL+S   + V   +  T  L   
Sbjct: 201 HSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKE 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLF 339
           G V+ FG  G+G LG      ++  + PR +  L  + V+QIS G  HT+  T   G+++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMY 317

Query: 340 GFGDNERAQLG 350
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 13/295 (4%)

Query: 6   GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALD---AQIIVAVSGGESHTLA 98

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +   GQ+F+ G  S    G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 125 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG  + +D   P  +++ R +   V+ VS G++H  AL   G V+T+G G  G 
Sbjct: 216 RNKFGQLGLNDTNDRWFPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           LGH     +  P  +  L  ++  Q+ C R+        +G +Y FG  G G LG
Sbjct: 274 LGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           ++ G  HTL +++   +FS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSGGESHTLALNDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYR 147

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRS-QRVIYVSCGEDHTAALTKEGGVFTF 266

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSGYVYTWGKGYC 239
           G+G    LGH   + E+ PR +  F   G  V ++S G +H +A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324

Query: 240 GALGHGDEIDKTLPEPLS 257
           G LG     ++  P P+ 
Sbjct: 325 GQLGTRSTCNRKSPAPVK 342



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 12/162 (7%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q++ G  H+  I+ S +VF  G +  G LG      +      +    +  V+ VS  E+
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFP-ALLKSLRSQRVIYVSCGED 252

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 119
           H A + + G VFT G       GH  TN  I  PR V  L G    Q++ G   T  F  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEI-NPRKVFELMGNIVTQISCGRQHTLAFTP 311

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTP--------KSIAPLE 153
             G +++ G   +GQLG   T +R +P         S AP+E
Sbjct: 312 SSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIE 353


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 1797 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 1855

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 1856 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 1914

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 1915 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 1973

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 1974 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 2033

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 2034 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 2090

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 2091 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 2137



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 1944

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 2062

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 2063 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 2122

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 2123 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 768  IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 825

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 883

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 884  AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 942

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 943  DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 1000

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 1061 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 779  IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 836

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 837  DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 893

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 894  TWGLGEYGRLGHGDNATQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 952  GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 1010

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 1011 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 1062



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 1889 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 1944

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 2003

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 2004 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGA 2062

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 2063 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 2120

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 2121 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 124 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 789

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 850 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 909

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 910 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 966

Query: 359 EPTEI 363
            P EI
Sbjct: 967 TPHEI 971



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 1790 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 1841

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 1842 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 1901

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 1902 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 1961

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 1962 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 2018

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 2019 YGKLGRGGSDGCKLPYKI 2036



 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 1787 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 1846

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 1847 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 1903

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 1904 EVYAWGEGEDGKLGH 1918


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4094

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4210

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  +  TG VY +G    G L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4329 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4029 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4086

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4087 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4145

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4146 CGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4203

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4204 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4263

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T  G ++ +
Sbjct: 4264 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAW 4320

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT I +
Sbjct: 4321 GSNSEGQLGLGHTNHVREPTLITV 4344



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P     A         Q+  G +    +  NG V + G 
Sbjct: 4004 VYLWGAGRHGQLAEAGRNVMIP-----AGAPSFSQAQQVICGQNCTFVIQANGTVLACGE 4058

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4059 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4118

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4119 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN--T 4176

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4177 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4225



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4004 VYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4060

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4061 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4117

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4118 KLGHGNSDRQRRPRQIEALQGEE 4140


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 227 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 336
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 168 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 261
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 171
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 172 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     + V  V  G  H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--NLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPR 121

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDS 313
            + SL +     V   +  T  +  TG +Y +G  G  ++G    G       PR I   
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGP 180

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    ++ +S G +HT ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 127/253 (50%), Gaps = 5/253 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G   +Q   G   +  L   G VH+CG NT GQLG         P  I  LE +  V  +
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETL-LVGLV 78

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG  E  +++  P+ I+T    GI +++VS G  
Sbjct: 79  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL--TGIKIIQVSCGHY 136

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL   G VY+WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 137 HSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 196

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G+ +G+G    G L         +  +P  + +L++  V  IS G  HT V+T  G++F
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 340 GFGDNERAQLGHD 352
            FGDN   QLG++
Sbjct: 257 TFGDNSCGQLGYN 269



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 14/299 (4%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V Q +  E H+  +L  G V +CGDN+    G R   R   RP L++AL+ +    V+
Sbjct: 21  AEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREE-RPGLIKALETLLVGLVS 79

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG  +  ++  TPK I  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGI-KIIQVSCGHYHS 138

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +G VYS+G  S   LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 196

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           SG  + WG    G L   G+   + +  P  + +LKS   + +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
            FG    G LG+          +   +D L    VSQI  G YHT+  V   G +  FG
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGL----VSQIDCGSYHTLAYVYTTGEVVSFG 311



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 14/288 (4%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SASENHAA 63
           R+  LL+S+ +V SCG +  G LG   +  +     R     A   + V   S  + H+ 
Sbjct: 31  RHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE----ERPGLIKALETLLVGLVSCGKEHSL 86

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            V   G+VF  G  S    G  +    IF P+ ++ L G+   QV+ G   +  L+  G 
Sbjct: 87  AVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQ 146

Query: 124 VHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           V++ G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G  + +GS
Sbjct: 147 VYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGTSFGWGS 205

Query: 183 GSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +   L   G+       +P +I     K + V+ +S G EH   L  +G V+T+G   C
Sbjct: 206 NNTGQLALSGNNTPVQRYKPHSIGAL--KSLDVIYISCGYEHTAVLTQNGKVFTFGDNSC 263

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 264 GQLGYNPTAKKRGPQQVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFG 311


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4056

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4172

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4230

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4291 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3991 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4048

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4049 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4107

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4108 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4165

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4166 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4225

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4226 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4282

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4283 GSNSEGQLGLGHTNHVREPTLVTV 4306



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3966 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4020

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4021 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4080

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4081 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4138

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4139 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4187



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3966 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4022

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4023 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4079

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4080 KLGHGNSDRQRRPRQIEALQGEE 4102


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 130/264 (49%), Gaps = 7/264 (2%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P+ R R+   L GV  +Q  +G   +  L   G VH+CG N  GQLG          K I
Sbjct: 12  PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI 69

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRK 208
             LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    
Sbjct: 70  RALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN-- 126

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 267
            I + +VS G  H +AL   G V++WG    G LG G +   +  P+ + SL      QV
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQV 186

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
            A    +F L  +G+ +G+G    G L      VS +  +P  + +L+   V  IS G  
Sbjct: 187 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 246

Query: 328 HTVVVTDRGRLFGFGDNERAQLGH 351
           HTVV+T  G++F FGDN   QLGH
Sbjct: 247 HTVVLTQNGKVFTFGDNTYGQLGH 270



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 15/320 (4%)

Query: 29  LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 88
           L  GP     VS  R+       + Q ++ E H+  +L +GQV +CGDN     G R   
Sbjct: 3   LSWGPGPRGPVSRRRVGL-GGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAP 61

Query: 89  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPK 147
                 R + AL+ +    V+ G   +  +  +G V   G+ + GQLG G+  +    P 
Sbjct: 62  CSAQLKR-IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM 120

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFR 206
            I  L ++  + Q++ G  + LA++  G V+S+GS S+  LG G++   +  P+ +++  
Sbjct: 121 KIKTLNDI-KIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL- 178

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEI--DKTLPEPLSSLKSHL 263
             GI + +V+AG  H  AL  SG  + WG+   G L  H + +      P  +S+LK+  
Sbjct: 179 -DGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG 237

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
            + +      T VL   G V+ FG   +G LG            P++++ +    VSQI 
Sbjct: 238 VIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG---PQLVEGIDGL-VSQID 293

Query: 324 TGLYHTVV-VTDRGRLFGFG 342
            G YHT+  V   G++  FG
Sbjct: 294 CGSYHTLAYVYTTGKVVSFG 313



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 19/296 (6%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 58
           Q  +G  H+LL+ SN  V SCG +  G LG    P + Q     RI      HV  VS  
Sbjct: 27  QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ---LKRIRALETLHVDLVSCG 83

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V   G+VF  G  S    G  +       P  ++ L  +  KQV+ G   +  L
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLAL 143

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G V + GSN+ GQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G  
Sbjct: 144 SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT- 201

Query: 178 YSFGSGSNFCLGHGEQHDE------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            SFG G N   G    H         +P +I   +  G  V+ +S G EH V L  +G V
Sbjct: 202 -SFGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 257

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +T+G    G LGH    +K+ P+ +  +   ++   C        +  TG V  FG
Sbjct: 258 FTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 16/254 (6%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           ++V+ G   T +L   G + +CG N +GQLG     +  + + I+ LE   ++V I+ G 
Sbjct: 37  QKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKS--NNSSIEQISSLE-AQTIVDISCGT 93

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVV 223
           ++ +AV+  G +YS+G GS   LG G        P+ I   F  K   ++++S G+ H +
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTK---IIQISCGNFHSL 150

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           AL   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   ++F L  +G+
Sbjct: 151 ALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGT 210

Query: 283 VYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           V+ +G    G LGF   P +G      +P  ++SLR   V+ IS G  HT V++  G ++
Sbjct: 211 VFAWGKNNAGQLGFKSDPMKGT----FKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVY 266

Query: 340 GFGDNERAQLGHDT 353
            FGD+   QLG ++
Sbjct: 267 TFGDDTHGQLGQNS 280



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 21/314 (6%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           F S   V +VS  E H  ++L+ G + +CG N     G +  N  I     + +L+    
Sbjct: 30  FQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSI---EQISSLEAQTI 86

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 164
             ++ G N +  ++  G +++ G  + GQLG G+   R  TPK I  L     ++QI+ G
Sbjct: 87  VDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNT-KIIQISCG 145

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + LA++ +G V+S+G      LG G Q  ++  P+ +++   KGI +V+V+AG     
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSL--KGIPLVQVTAGGSQSF 203

Query: 224 ALDSSGYVYTWGKGYCGALG-HGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           AL  SG V+ WGK   G LG   D +  T  P  ++SL++     +   +  T VL   G
Sbjct: 204 ALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDG 263

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           SVY FG    G LG   +   ++   P+ ++   A  VSQ++ G YHT+       L+ F
Sbjct: 264 SVYTFGDDTHGQLG---QNSGNQTSVPQKIED-YAGQVSQVACGRYHTL-------LYVF 312

Query: 342 GDNERAQLGHDTLR 355
             N     G  +LR
Sbjct: 313 SCNRIVSFGKGSLR 326



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 12/291 (4%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ G  HTL L+ + ++ SCG +  G LG     +   S  +I+   A  +V +S   N
Sbjct: 38  KVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNS---SIEQISSLEAQTIVDISCGTN 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 119
           H+  V   G +++ GD S    G  + +   F P+ +  L      Q++ G NF    L+
Sbjct: 95  HSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCG-NFHSLALS 153

Query: 120 IRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S   A++ +G V+
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQSFALSMSGTVF 212

Query: 179 SFGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++G  +   LG      +   +P A+ + R  G  V  +S G+EH   L   G VYT+G 
Sbjct: 213 AWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG--VAYISCGEEHTAVLSKDGSVYTFGD 270

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
              G LG       ++P+ +      ++   C R      +     +  FG
Sbjct: 271 DTHGQLGQNSGNQTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCNRIVSFG 321



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 231 VYTWGKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARK-----RKTFVLVDTGSV 283
           +Y WG    G  AL  G++      E       +   Q C +K     + T  L++ G++
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKE-----NDYFQSQECVQKVSCGEKHTLYLLEDGTL 55

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
              G   +G LG      S + +      SL A  +  IS G  H+V V+D G ++ +GD
Sbjct: 56  LSCGQNPYGQLGRKSNNSSIEQI-----SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGD 110

Query: 344 NERAQLGHDTL 354
               QLG   L
Sbjct: 111 GSEGQLGTGNL 121


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 8/359 (2%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           ++GR +     + +++  G +  G LG G E  +    T     +    VQ+   E    
Sbjct: 8   SSGRENLYFQGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIR 121
            V   G+++  G  +    G   T   +  P L+E+++ V  K+V   +G      L+  
Sbjct: 67  AVTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V++ G    G+LGHG+      P+ I  L  +  VV +AAG ++   VT  G +Y++G
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWG 184

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LGH +  D+L+P+ ++  +   +  +   +GD   + L     V++WG G  G 
Sbjct: 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 244

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G      +P  + SL     V+V    + +  L  +G+VY +G   +  LG    G 
Sbjct: 245 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GS 301

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 302 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 360



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 168

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH-RVVDIACGSGDAQTLC 227

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 285

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 16/257 (6%)

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 168
           L F G  TI G  H    N  GQLG   G  +  PTP +++A L  V    Q+  G   +
Sbjct: 14  LYFQGSGTIYGWGH----NHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTL 65

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            AVT +G +Y+ G G+   LG G       P  +++ +   I  V V++G +H +AL S 
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G VY+WG+   G LGHG+      P  + SL+    V V A    +  +   G +Y +G 
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNER 346
             +G LG  D   S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD + 
Sbjct: 186 GRYGRLGHSD---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 242

Query: 347 AQLGHDTLRGCLEPTEI 363
            +LG     GC  P +I
Sbjct: 243 GKLGRGGSDGCKVPMKI 259



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 60/283 (21%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + + +G  H L L S   V+S G +  G LGHG   + C     I       VV V+A  
Sbjct: 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGG 168

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG----------------- 102
            H+A V  +G ++T G       GH D+   + +P+LVEAL+G                 
Sbjct: 169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLC 227

Query: 103 ---------------------------VPCK----------QVTAGLNFTGFLTIRGHVH 125
                                      VP K          +V  G  F+  LT  G V+
Sbjct: 228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 287

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G    
Sbjct: 288 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDE 346

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
             LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 347 GQLGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 387


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 163/343 (47%), Gaps = 22/343 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G +H+ +I++S  +   G   CG LG G    + +   R+   S  +V+ VS S+ 
Sbjct: 46  EVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD--LKDIVIPRV-MTSIKNVINVSCSDR 102

Query: 61  HAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           H+A +L+ G+++T G N S   G         N  I  P+LVE L      +V+ G   T
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT     +T G    G+LGHGDT D  TPK I  L  + SV  I  G  +   +  NG
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGL-SVKNIVCGGHHTAILLNNG 221

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            VY  G G+   LG G + D   P+ +Q +   K I    VS G +H   + + G VYTW
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK--EVSLGYQHSAVITTKGKVYTW 279

Query: 235 GKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           G+G  G LGH   G E D   P+ +  L S +AV +      T V+ + G VY +G    
Sbjct: 280 GQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN 337

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
              G  D   +D  L P     L+  ++ Q+S G  HT+ ++D
Sbjct: 338 LGHGVIDSKPNDPTLHP----ILQNKNIVQVSCGKTHTIALSD 376



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 18/268 (6%)

Query: 92  FRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
             P+L+E+L      K+V  G + +  +T  G +   G    GQLG GD  D   P+ + 
Sbjct: 30  IEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMT 89

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ------PRAIQT 204
            ++   +V+ ++    +  A+  +G +Y++G   +  LG G  +  L       P+ ++ 
Sbjct: 90  SIK---NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
              +   V++VS G  H   L      YTWG G  G LGHGD  D   P+ + SL     
Sbjct: 147 LLNE--KVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSV 204

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 323
             +      T +L++ G VY  G   FG LGF   G  + +  P++L  SL    + ++S
Sbjct: 205 KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF---GSKEDIYIPKLLQGSLTNKSIKEVS 261

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            G  H+ V+T +G+++ +G   R  LGH
Sbjct: 262 LGYQHSAVITTKGKVYTWGQGGR--LGH 287



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 15/334 (4%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           S V + GSS  G LG   E +        +  S   + +V    +H+A +  SG++   G
Sbjct: 8   SGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                  G  D  + I  PR++ ++K V    V+     +  +   G ++T G N  G+L
Sbjct: 68  YGGCGQLGLGDL-KDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 136 GHGDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           G G            TP+ +  L     V++++ G  +   +T     Y++G G    LG
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLN-EKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLG 183

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           HG+ +D   P+ I++    G+ V  +  G  H   L ++G VY  G G  G LG G + D
Sbjct: 184 HGDTNDVYTPKLIESLA--GLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241

Query: 250 KTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
             +P+ L  SL +    +V    + + V+   G VY   W   G LG    G    +L P
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYT--WGQGGRLGHIYNGPEPDILSP 299

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           ++++ L +     IS G  HTVV+++ G ++ +G
Sbjct: 300 KLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWG 333


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 169/359 (47%), Gaps = 20/359 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT++++ N  +F+ G++  G LG G   T+    T +       +  V+A   H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTT-VKALKPEKITHVAAGRFH 98

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  S ++++ G  S    GH D    +  P  +E+L+      +  G   +  +T  
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 122 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  GSN+ GQLG   DT+  PT      L+   SV+ +A G  +   VT +G +Y+F
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTM-----LDLGKSVISVACGYYHTAVVTADGKLYTF 212

Query: 181 GS--GSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDSSGYVYTWGK 236
           G   G    LG  E H   +P+ +     KGI   VV+V+ G  H VAL +SG VYT+G 
Sbjct: 213 GETEGGKLGLGDIEAHKVTKPKVV-----KGISGKVVKVACGGNHTVALTASGQVYTFGS 267

Query: 237 GYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G  G LG G +I D  +P+ + +L       +   +  T V+ D G ++ FG    G LG
Sbjct: 268 GQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLG 327

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
             D   S+ + +P  +  L+   V  I+ G  HT+V  ++      GD++     +D +
Sbjct: 328 QGDESFSN-LFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEV 385



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 25/351 (7%)

Query: 33  PETTQCVSFTRINFPS---------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 83
           PET    +F +  F           +  V  ++  + H   V ++G++FT G+N     G
Sbjct: 9   PETGAVFTFGKSRFGDNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLG 68

Query: 84  HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
              +N+   +P  V+ALK      V AG   T  +T    +++ G  + G LGHGD  D 
Sbjct: 69  I-GSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL 127

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
             P SI  LE+   V  IA G  +  A+T NG +Y +GS S   LG   ++D +   +  
Sbjct: 128 NMPTSIESLED-KDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL--KNDTI---SYP 181

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDK-TLPEPLSSLKS 261
           T    G  V+ V+ G  H   + + G +YT+G+   G LG GD E  K T P+ +  + S
Sbjct: 182 TMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI-S 240

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
              V+V      T  L  +G VY FG    G LG   + +   +  P+++++L    +  
Sbjct: 241 GKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI--PKLVEALSKRKIKH 298

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPTEIFIQEMEE 370
           I+ G  HT VV+D+G LF FGD    +LG   ++     +P  + +Q ++E
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKP--VKVQRLKE 347



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 13/97 (13%)

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           +TG+V+ FG   FG         ++K         +R+  V+ I+ G  HTVVVT+ GRL
Sbjct: 10  ETGAVFTFGKSRFGD------NRTNKFW-------IRSDKVTDIACGDEHTVVVTENGRL 56

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           F FG+NE  QLG  + +   +PT +   + E+ T +A
Sbjct: 57  FTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVA 93


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 158/339 (46%), Gaps = 13/339 (3%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     D
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKD 178

Query: 196 ELQPRA-IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
                A ++     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  P 
Sbjct: 179 LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPS 238

Query: 255 PLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            L S+++ L V+   C  +   F L + G V+  G   +G LG    G S+  + PR++ 
Sbjct: 239 QLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGASNNEMIPRMVI 293

Query: 313 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 350
            L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 294 ELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 176
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 177 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 293
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 294 LG 295
           LG
Sbjct: 331 LG 332



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 18/271 (6%)

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 206
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH---- 262
            +   VV+++ G+ H +AL S G +Y+WG    G LG   +  K LP   + L+      
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSPKDLPHSNAPLRLTTILG 193

Query: 263 --LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             LA   C     +F++  + +V+G+G    G LG  D         P  L S+R   V 
Sbjct: 194 IPLATIACGGNH-SFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVR 249

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            ++ G  ++V +T+ G +F  G     QLGH
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 113
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 232
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 233 TWGKGYCGALGHGDEIDKTLPE 254
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 124 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 180 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 239 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 358 LEPTEI 363
             P+++
Sbjct: 235 AYPSQL 240



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T  L   
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGASNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 122 G-HVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           G  V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 6/225 (2%)

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +G G   
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G LGHGD
Sbjct: 60  NLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
             D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D   +    
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD---NIDHC 174

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 175 SPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 219



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 5/239 (2%)

Query: 21  CGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
            G +  G LG G  T   +   +I       +  V+A   H A V + G++F  G     
Sbjct: 1   WGRNQNGQLGLGT-TEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
             G  D N  +  P+ V ++ G     V  G   T  ++  G ++T G + +GQLGHGD 
Sbjct: 60  NLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
            DR  P  +  L    ++ QI+ G  + +A+T +G +Y +G      +G G+  D   P 
Sbjct: 119 EDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP- 176

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
            IQ    +   V+++S G  H +A+     V++WG+G  G LGHG+ +D+  P  L +L
Sbjct: 177 -IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 92

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 93  TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 151

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 209

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
           G G+N  LGHGE  D   P  ++     G
Sbjct: 210 GRGTNGQLGHGESVDRNTPMILEALSVDG 238



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG+   G LG G   D  +P+ + + +      V A    T  + + G ++G+GW  +G+
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  DR  +D+++ P+ + S+    +  ++ G  HT+ V+  G L+ +G ++  QLGH  
Sbjct: 61  LGLGDR--NDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 354 LRGCLEP 360
               L P
Sbjct: 118 FEDRLVP 124


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 17/330 (5%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  GS++ G LG G  E     +   +++  A  V++ +   NH  F+ + G+V++CG 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     GH   ++P  RP+LV  L       V  G   +  L+  G V + GS+ +GQLG
Sbjct: 61  NDYGQLGH---DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG 117

Query: 137 H--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 193
           H  G TL +  PK I  L +   VVQIAAG  + +A+T  G ++ +G+     LG G   
Sbjct: 118 HQLGGTL-QIVPKLIKSLAKY-QVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTIT 175

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             E  P  + +    GI    ++ G  H  A+  SG V+ WGK   G LG  D + K  P
Sbjct: 176 PYESTPTTVCSL--SGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFP 233

Query: 254 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
             L +L+ S +    C  +  TF+ +D G V+  G   +G LG    G S+++L PR + 
Sbjct: 234 TQLRTLRNSRVRFISCGDEFSTFLTLD-GGVFSCGAGMYGQLG--HGGTSNEIL-PRQVL 289

Query: 313 SLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
            L    ++QIS G  H++  V  RGR++ +
Sbjct: 290 ELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 12/264 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +F P+ ++  +     +   G N T FLT  G V++CGSN +GQLGH     R  P+ ++
Sbjct: 22  VFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQP--RKRPQLVS 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRK 208
            L+   S++ +A G  + LA++  G V+S+GS +   LGH +    LQ  P+ I++  + 
Sbjct: 80  GLDAY-SIINVACGEMHSLALSRWGEVFSWGSDNYGQLGH-QLGGTLQIVPKLIKSLAK- 136

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQV 267
              VV+++AG  H VAL ++G ++ WG    G LG G     ++ P  + SL       +
Sbjct: 137 -YQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALI 195

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                 TF +  +G+V+G+G    G LG  D  VS K   P  L +LR   V  IS G  
Sbjct: 196 ACGANHTFAVSKSGAVFGWGKNINGQLGLNDT-VSKKF--PTQLRTLRNSRVRFISCGDE 252

Query: 328 HTVVVTDRGRLFGFGDNERAQLGH 351
            +  +T  G +F  G     QLGH
Sbjct: 253 FSTFLTLDGGVFSCGAGMYGQLGH 276



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 9/289 (3%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M+   G  HTL ++ +  V+SCGS+  G LGH     +    + ++   A  ++ V+  E
Sbjct: 37  MKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLD---AYSIINVACGE 93

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + + G+VF+ G ++    GH+        P+L+++L      Q+ AG   +  LT
Sbjct: 94  MHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153

Query: 120 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G +   G+N  GQLG G  T    TP ++  L  +   + IA G ++  AV+ +G V+
Sbjct: 154 NAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVF 212

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G   N  LG  +   +  P  ++T R   +  +  S GDE    L   G V++ G G 
Sbjct: 213 GWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFI--SCGDEFSTFLTLDGGVFSCGAGM 270

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 286
            G LGHG   ++ LP  +  L      Q+ C R+     +   G VY +
Sbjct: 271 YGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 283 VYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           ++G+G    G LG    G+ ++ V  P+ LD   A  V + + G  HT+ +T  G+++  
Sbjct: 1   MFGWGSTIHGELGL--GGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSC 58

Query: 342 GDNERAQLGHDTLR 355
           G N+  QLGHD  R
Sbjct: 59  GSNDYGQLGHDQPR 72


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 20/327 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G+VFT G+ S    GH  +      P LVE+L       V  G
Sbjct: 94  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGH-GSREDYIHPSLVESLAVSNVDFVACG 152

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LGHG  L    PK I+   E   V  ++ G  +  
Sbjct: 153 EFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTA 212

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            +T  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 213 LITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESL--SGLKTIAVACGVWHTAAVVEVI 270

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 271 VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLT 330

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+G G   +G LG P    SD  L P +++ +   +V Q++ G YH  V+T +  +
Sbjct: 331 TSGQVWGMGNTVYGQLGNPR---SDGKL-PCLVEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFI 365
           F +G     +LGH  +     PT + +
Sbjct: 387 FTWGKGANGRLGHGDIEDRKIPTLVEV 413



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 148/354 (41%), Gaps = 35/354 (9%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           ++  L+  N  VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 102 KHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDF--------VACGE 153

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H   V  +G+++T GD +      GH          R+  AL+G     V+ G   T  
Sbjct: 154 FHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 172
           +T  G + T G  T G LGHG+    P P+ +  L  + ++  +A G  +  AV      
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIA-VACGVWHTAAVVEVIVT 272

Query: 173 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
                  +G ++++G G    LGHG++   ++P  + +      H  R++ G    V L 
Sbjct: 273 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFH--RIACGHSLTVGLT 330

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +SG V+  G    G LG+    D  LP  +  +     VQV        VL     V+ +
Sbjct: 331 TSGQVWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTW 389

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G    G LG  D  + D+ + P +++ LR   V  I+ G   T  +  R  + G
Sbjct: 390 GKGANGRLGHGD--IEDRKI-PTLVEVLRDRGVRHIACGANFTAAICQRKWMSG 440



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 29/293 (9%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 149 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGT 208

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +  +GQ+FT GD +    GH +    I  PR VE+L G+    V  G+  T  + 
Sbjct: 209 WHTALITSTGQLFTFGDGTFGVLGHGN-RESIPCPREVESLSGLKTIAVACGVWHTAAVV 267

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 268 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDY-DFHRIACGHSLT 326

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V+  G+     LG+     +L P  ++     G +VV+V+ G  HV  L   
Sbjct: 327 VGLTTSGQVWGMGNTVYGQLGNPRSDGKL-PCLVEDI--MGENVVQVACGSYHVAVLTVK 383

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLA------VQVCARK 271
             V+TWGKG  G LGHGD  D+ +P  +  L+     H+A        +C RK
Sbjct: 384 SEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQRK 436



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 18/281 (6%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P  + 
Sbjct: 80  VLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE 139

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +   +
Sbjct: 140 SL-AVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRI-SGALE 197

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G  V  VS G  H   + S+G ++T+G G  G LGHG+      P  + SL     + V 
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257

Query: 269 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
                T  +V+            G ++ +G      LG  D+   +  ++P  + SL  +
Sbjct: 258 CGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRVKPTCVASLIDY 314

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              +I+ G   TV +T  G+++G G+    QLG+    G L
Sbjct: 315 DFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKL 355



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 4/186 (2%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S  +GS+  +    +HD L P+ +++  +  + V  V  G +H   +  +G V+TWG+  
Sbjct: 63  SVRAGSDAVIRSTVRHDVLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEES 120

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 121 GGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWG-DGTHNIGLLG 179

Query: 299 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 180 HGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESI 239

Query: 358 LEPTEI 363
             P E+
Sbjct: 240 PCPREV 245



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 226 DSSGYVYTWGKGYC-GALGHGDEI--------DKTLPEPLSSLKSHLAVQV----CARKR 272
           DSSG VY WG+  C  ++  G +         D  LP+P   L+S L + V    C  K 
Sbjct: 47  DSSGDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKP---LESKLVLDVYHVDCGVKH 103

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              V    G V+ +G    G LG    G  +  + P +++SL   +V  ++ G +HT  V
Sbjct: 104 AALV-TKNGEVFTWGEESGGRLGH---GSREDYIHPSLVESLAVSNVDFVACGEFHTCAV 159

Query: 333 TDRGRLFGFGD 343
           T  G L+ +GD
Sbjct: 160 TTAGELYTWGD 170


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 135/261 (51%), Gaps = 10/261 (3%)

Query: 94  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P L+E+++ V  K+V   +G      L+  G V + G    G+LGHG+      P+ I  
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L     VV IAAG ++   +T  G ++++G G    LGHG+  D+++P+ ++    KG+ 
Sbjct: 438 LRG-KEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEAL--KGVR 494

Query: 212 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           V+ V+  +GD   + +     V++WG G  G LG G      +P+ + +L     V+V  
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
             + +  L  +G VY +G   +  LG    G  D V RPR + +L+  +V  I+TG  H 
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVAALQGKNVISIATGSLHC 611

Query: 330 VVVTDRGRLFGFGDNERAQLG 350
           V  TD+G +F +GDN+  QLG
Sbjct: 612 VACTDQGEVFTWGDNDEGQLG 632



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+VF+ G+      GH + N    RPR++E+L+G     + AG 
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAAGG 450

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
             +  +T  G + T G   +G+LGHGD+ D+  PK +  L+ V  V+ +A  +G +  L 
Sbjct: 451 AHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGV-RVIDVACGSGDAQTLC 509

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +  V+S+G G    LG G       P+ ++    +G  VV+V  G +  VAL  SG 
Sbjct: 510 ITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG--VVKVECGSQFSVALTKSGC 567

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +++L+    + +           D G V+ +G   
Sbjct: 568 VYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDND 627

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G LG    G +  + RPR++ +L+   +++++ G  H++
Sbjct: 628 EGQLG---DGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 165/378 (43%), Gaps = 50/378 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  H L +S+   VFS G +  G LGHG   + C     I       VV ++A   H
Sbjct: 394 VNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAAGGAH 452

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +A +  +G++FT G       GH D+   + +P+LVEALKGV    V  G      L I 
Sbjct: 453 SACITSTGELFTWGKGRYGRLGHGDSEDQM-KPKLVEALKGVRVIDVACGSGDAQTLCIT 511

Query: 122 GH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V + G   +G+LG G +     P+ +  L   G VV++  G  + +A+T +G VY+
Sbjct: 512 DDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG-VVKVECGSQFSVALTKSGCVYT 570

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG      +PR +     +G +V+ ++ G  H VA    G V+TWG    
Sbjct: 571 WGKGDYHRLGHGSDDHVRRPRKVAAL--QGKNVISIATGSLHCVACTDQGEVFTWGDNDE 628

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW----------- 288
           G LG G      +P P           V A + K    V  GS +   W           
Sbjct: 629 GQLGDGST--SAIPRPR---------LVAALQGKKINRVACGSAHSLAWSTSKPVNAGKL 677

Query: 289 -----MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI---STGLYHTVVVTDRGRLFG 340
                M +  L    + ++  VLR R+   +  HH S +   S  ++  +    RG+L  
Sbjct: 678 PVQVPMEYNHL----QNITMPVLRNRL---VLLHHFSDLFCPSIPMFDLL----RGKL-A 725

Query: 341 FGDNERAQLGHDTLRGCL 358
             +  +  +G DTLRG L
Sbjct: 726 DENGSKPLVGLDTLRGVL 743



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G +   G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AV      Y
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPV----QLIGGEQTLFAV------Y 357

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V++WG+  
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+      P  + SL+    V + A    +  +  TG ++ +G   +G LG   
Sbjct: 418 DGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLG--- 474

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            G S+  ++P+++++L+   V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 475 HGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 534

Query: 357 CLEPTEI 363
           C  P ++
Sbjct: 535 CKIPQKV 541



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           ++HDE   + +Q   R+          D+  ++   SG ++ WG  + G LG  +     
Sbjct: 283 QEHDE---QLLQWLSRRP---------DDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVK 330

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           LP P  +L +   VQ+   ++  F +  T         G+G+ G    G ++ V  P +L
Sbjct: 331 LPTPCDALAALRPVQLIGGEQTLFAVYAT---------GYGAGGRLGIGGTESVSSPTLL 381

Query: 312 DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +S++  H+ +++  +G  H + ++  G +F +G+ E  +LGH     C  P  I
Sbjct: 382 ESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVI 435


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 148/326 (45%), Gaps = 29/326 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVP-CK 106
           V  V+    H+  V  +G+V+  GD S    +     R     I  P +      +P   
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVA 269

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD------------RPTPKSIAPLEE 154
            V  G      +T  G + + G+   GQLG G   D            R    S+ P   
Sbjct: 270 TVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP-RL 328

Query: 155 VGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           VGS       +A G  + LA+T NG V+SFG G+   LGHG++ +   PR +      G+
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDAL--WGV 386

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQVC 268
            V +++AGD H  +L +SG VYTWG+G  GALGH D  +++ P P+ +L        Q+ 
Sbjct: 387 GVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIA 446

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGL 326
                T  +   GS     W G GS G    G +  VL P I+D   L    V QIS G 
Sbjct: 447 CGGDHTLAIAGGGSGVLLAW-GRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGS 505

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHD 352
            H+V VT+ G ++ +G   + QLGH+
Sbjct: 506 KHSVAVTEGGCVYTWGARTQGQLGHE 531



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 102/240 (42%), Gaps = 24/240 (10%)

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFCLGHGEQHDE--LQP 199
           PTP+S++ L+    V  +A G  + +AVT  G VY+FG  SG    L    +  E  + P
Sbjct: 197 PTPRSVSSLDGR-DVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDP 255

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
             +         V  V+ G  H  A+ +SG + +WG    G LG G   D +      SL
Sbjct: 256 PEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSL 315

Query: 260 KSHLA----------------VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
               A                  V      T  L   G V+ FG   FG+LG  DR   D
Sbjct: 316 IRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCD 375

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               PR++D+L    V+QI+ G  H+  ++  GR++ +G  +   LGH  +     PT +
Sbjct: 376 V---PRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPV 432



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HTL L +N  VFS G    G LGHG +   C     ++      V Q++A +NH
Sbjct: 339 VACGAGHTLALTANGRVFSFGRGAFGALGHG-DRLNCDVPRLVDALWGVGVAQIAAGDNH 397

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 118
           +A +  SG+V+T G       GHRD  NR   RP  V+AL   GV C+Q+  G + T  L
Sbjct: 398 SASLSASGRVYTWGRGKYGALGHRDVDNRS--RPTPVQALDDAGVRCEQIACGGDHT--L 453

Query: 119 TIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTG 173
            I G     +   G  + G  G G T D  TP  I   L     V QI+AG  + +AVT 
Sbjct: 454 AIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTE 513

Query: 174 NGVVYSFGSGSNFCLGH 190
            G VY++G+ +   LGH
Sbjct: 514 GGCVYTWGARTQGQLGH 530


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  123 bits (308), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 23/321 (7%)

Query: 41  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 100
           FT++ +P    ++ V+A   H A + QSG++FT G+      GH D    I  P+ V AL
Sbjct: 122 FTKL-YPEE-RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD-EESISTPKQVVAL 178

Query: 101 KGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVG 156
             +P K V  G   T  L  T    ++T G+N  GQLG GD  D  T  P+S+A +    
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA-VPGAK 237

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
            +V + AG S    +  +G ++++G G +  LGHG+  +  QP  + +    G  VV V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLY--GHVVVAVA 295

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLA-VQVCARKRKT 274
            G  H +AL  +G +++WG+G  G LGHG    + L P+ L         + + A    +
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS 355

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDR-----GVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              +D GSVY +G   +G LG  D       +  ++L PR +          IS G  HT
Sbjct: 356 VAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI------RFKTISCGFQHT 409

Query: 330 VVVTDRGRLFGFGDNERAQLG 350
           V +T    ++ +G     +LG
Sbjct: 410 VALTSDNTIYSWGCGLGGRLG 430



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 7/244 (2%)

Query: 14  SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           + S +++ G++  G LG G   +   C+    +  P A  +V + A  + AA +  SG +
Sbjct: 200 AGSGLYTWGNNEFGQLGRGDCGDDFTCLP-ESVAVPGAKRLVALDAGASRAAVIDSSGAL 258

Query: 72  FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           FT G       GH DT NR  ++P LV +L G     V  G   +  LT  G + + G  
Sbjct: 259 FTWGRGDHGRLGHGDTENR--YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRG 316

Query: 131 THGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
            +GQLGHG    +   PK +    ++  ++ I+AG  + +A   +G VY++G      LG
Sbjct: 317 ENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILG 376

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
            G+  D       +    +GI    +S G +H VAL S   +Y+WG G  G LG  +E +
Sbjct: 377 TGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436

Query: 250 KTLP 253
           +  P
Sbjct: 437 QCAP 440



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 102/359 (28%), Positives = 152/359 (42%), Gaps = 42/359 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRIN----FPSAAHV 52
           +  G  H  +IS S  +F+ G    G LGHG E +     Q V+   I     F      
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 53  VQVSASENHAAFVL---QSGQVF--TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           + +S +     +     + GQ+    CGD+  F C       P  + RLV          
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDD--FTCLPESVAVPGAK-RLV---------A 241

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           + AG +    +   G + T G   HG+LGHGDT +R  P  ++ L     VV +A G  +
Sbjct: 242 LDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYG-HVVVAVALGGGH 300

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            LA+T  G ++S+G G N  LGHG  Q  +L P+ +Q F      ++ +SAG  H VA  
Sbjct: 301 SLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMP-KIIGISAGGYHSVAQL 359

Query: 227 SSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             G VY WG    G LG GD  D    +P+ +   +      +    + T  L    ++Y
Sbjct: 360 DDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIY 419

Query: 285 GFGWMGFGSLG-FPDRGVSDKV------LRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            +G    G LG F ++     +       +P +     A  +S I  G  +TVV T  G
Sbjct: 420 SWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFS---AGEISTIVIGKKNTVVATSSG 475



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 128 GSNT-HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           G+N+ H +   G   +    K    L     ++ + AG +++  ++ +G ++++G G   
Sbjct: 100 GNNSLHNKDDSGSNNNNDDDKYFTKLYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYG 159

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG--YVYTWGKGYCGALGH 244
            LGHG++     P+  Q      I +  V  G    +AL  +    +YTWG    G LG 
Sbjct: 160 RLGHGDEESISTPK--QVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGR 217

Query: 245 GDEID--KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GD  D    LPE ++   +   V + A   +  V+  +G+++ +G    G LG  D   +
Sbjct: 218 GDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGD---T 274

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-CLEPT 361
           +   +P ++ SL  H V  ++ G  H++ +T  G LF +G  E  QLGH + +   L P 
Sbjct: 275 ENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPK 334

Query: 362 EI-FIQEMEEDTGLA 375
           ++ F  +M +  G++
Sbjct: 335 QLQFFVDMPKIIGIS 349


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 227 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 336
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 168 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 171
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 172 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 261
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 328
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  123 bits (308), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/300 (29%), Positives = 143/300 (47%), Gaps = 11/300 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           +++S  + H A V ++G++F  G N+    G   T   + +P  V+AL+    K    G 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALRSERVKLTACGR 97

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A+T
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G +Y  G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G +Y
Sbjct: 158 QDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           T+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG   
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTEN-EVYSFGLGQ 271

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG        ++  PR+++  R   V   + G  HT ++TD G L+ FGD    +LG
Sbjct: 272 FGQLGHGTFIFESRL--PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score =  100 bits (250), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 55
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 113
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 172
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 173 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 231 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 290 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 8/196 (4%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 277
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 338 LFGFGDNERAQLGHDT 353
           L+ FG+ +  +LG  T
Sbjct: 212 LYTFGEKDSGKLGLST 227



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 8/185 (4%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G  +  D     A   F  K    +R+S GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFADN----APSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67

Query: 242 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G LG  D  
Sbjct: 68  LGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G       L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTP 184

Query: 361 TEIFI 365
            E+ +
Sbjct: 185 QEVSV 189


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 39/345 (11%)

Query: 28  VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 87
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 88  NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 144
                 P+ + AL      ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTALDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 205 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 123
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
              E+    P  + +LK    V VC    ++F   D
Sbjct: 759 DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 22/301 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 230 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 287 GWMGFGSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           G   +G LG       RG       P++++ +    VSQI  G  HT+  +   G++  F
Sbjct: 261 GDNSYGQLGHDPTAEKRG-------PQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 177 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 227 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 336
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 119 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 168 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 171
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 172 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 261
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 49
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 328
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 226 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 337 RLFGFGD--NERAQLGHDTLRGCLEPTEI 363
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 146/313 (46%), Gaps = 21/313 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HAA + + G+VF  G+ S    GH+  +  +  P++VE+L GV  K V  G
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPKMVESLDGVHVKSVACG 365

Query: 112 LNFTGFLTIRGHVHTCGSNTHG-QLG-HGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  LT  G ++  G N +G  LG    +  +  P+ I+ PL  V  ++ +A G  + 
Sbjct: 366 EYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGV-CILNVACGDWHT 424

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
             V+ +G ++++G GS   LGHG      QP+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESL--KGLLVKSVACGSWHTAAIVDI 482

Query: 228 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                      G ++TWG G  G LGH D   K LP  ++ L      QV   +  T  L
Sbjct: 483 IVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVAL 542

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
            +TG VY  G    G LG P       V+   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TNTGKVYTMGSSVHGQLGNPHAKDKSIVI---VEGKLKEEFVKEISSGSYHVAALTSSGS 599

Query: 338 LFGFGDNERAQLG 350
           L+ +G     QLG
Sbjct: 600 LYTWGKGTNGQLG 612



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 136/293 (46%), Gaps = 28/293 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGV-LGHGPETTQCVSFTRINFP-SAAHVVQVSASE 59
           +  G Y T  +++S  +++ G +  G  LG    +       RI+ P +   ++ V+  +
Sbjct: 362 VACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGD 421

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 116
            H A V  SGQ+FT GD S    GH +    + +P+ VE+LKG+  K V  G   T    
Sbjct: 422 WHTAIVSSSGQLFTYGDGSFGVLGHGNL-LSVSQPKEVESLKGLLVKSVACGSWHTAAIV 480

Query: 117 --------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                   F  + G + T G    G+LGH D   +  P  +A L E+    Q++ G    
Sbjct: 481 DIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVEL-DFDQVSCGRMLT 539

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T  G VY+ GS  +  LG+    D  +   I   + K   V  +S+G  HV AL SS
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNPHAKD--KSIVIVEGKLKEEFVKEISSGSYHVAALTSS 597

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHLAVQVCARK 271
           G +YTWGKG  G LG G+  D+  P  + +L+          S+L   +C  K
Sbjct: 598 GSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHK 650



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +    ++ G      +T RG V   G  + G+LGH   +D  +PK +  L+
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLD 355

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQ-HDELQPRAIQTFRRKG 209
            V  V  +A G     A+T +G +Y++G    G+N  LG  E+   +  PR I +    G
Sbjct: 356 GV-HVKSVACGEYQTCALTDSGELYAWGENKYGAN--LGCEERSRSQWLPRRI-SGPLTG 411

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + ++ V+ GD H   + SSG ++T+G G  G LGHG+ +  + P+ + SLK  L   V  
Sbjct: 412 VCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVAC 471

Query: 270 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
               T  +VD            G ++ +G    G LG  D    +K L P  +  L    
Sbjct: 472 GSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLLPTCVAQLVELD 528

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             Q+S G   TV +T+ G+++  G +   QLG+
Sbjct: 529 FDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGN 561



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 154/357 (43%), Gaps = 33/357 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ GR H  LI+    VF  G    G LGH  +     S   +      HV  V+  E  
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDM-DVSSPKMVESLDGVHVKSVACGEYQ 368

Query: 62  AAFVLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 117
              +  SG+++  G+N   ++  C  R  +R  + PR +   L GV    V  G   T  
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEER--SRSQWLPRRISGPLTGVCILNVACGDWHTAI 426

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 173
           ++  G + T G  + G LGHG+ L    PK +  L+ +  V  +A G  +  A+      
Sbjct: 427 VSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGL-LVKSVACGSWHTAAIVDIIVD 485

Query: 174 ----NGV---VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
               NGV   ++++G G    LGH +   +L P  +       +   +VS G    VAL 
Sbjct: 486 RFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE--LDFDQVSCGRMLTVALT 543

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           ++G VYT G    G LG+    DK++      LK     ++ +       L  +GS+Y +
Sbjct: 544 NTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTW 603

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDR 335
           G    G LG  +  V D+   P ++++LR   V  I+ G        L+ ++ V+D+
Sbjct: 604 GKGTNGQLGLGN--VEDRNF-PTLVEALRDMQVQSIACGSNLTAAICLHKSISVSDQ 657



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   +T  G V+ +G GS   LGH    D   P+ +++    G+HV  V+ 
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESL--DGVHVKSVAC 364

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 274
           G+    AL  SG +Y WG+   GA    +E  ++  LP  +S  L     + V      T
Sbjct: 365 GEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHT 424

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV---- 330
            ++  +G ++ +G   FG LG    G    V +P+ ++SL+   V  ++ G +HT     
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLG---HGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVD 481

Query: 331 VVTDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++ DR       G+LF +GD ++ +LGH  L   L PT
Sbjct: 482 IIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPT 519



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 4/173 (2%)

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           +Q D L P+ +++     + V  +S G +H   +   G V+ WG+G  G LGH  ++D +
Sbjct: 289 KQVDALLPKLLESTVM--LDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVS 346

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS-LGFPDRGVSDKVLRPRI 310
            P+ + SL       V   + +T  L D+G +Y +G   +G+ LG  +R  S  + R RI
Sbjct: 347 SPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPR-RI 405

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              L    +  ++ G +HT +V+  G+LF +GD     LGH  L    +P E+
Sbjct: 406 SGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEV 458


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           ++V+ G   T F+   G V+TCGSN +GQLG      RPT   +    +  S+ Q++ G 
Sbjct: 37  REVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPT---VITALDTQSIQQVSCGD 93

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            + L V     V+S+G      LGH  +   ++  +PR ++      + +V+V+ G +H 
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL--SSLQIVQVACGGKHS 151

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +AL + G +++WG    G LG G   ++  P+ L+SL      Q+ A    +FVL  +G+
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGA 211

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V+GFG   FG LG  D G  D+   P  + SLR+  V+ IS G  HT V+T  G +  FG
Sbjct: 212 VFGFGRNTFGQLGLGDTG--DRKY-PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 343 DNERAQLGHDTLRGCLEPTEIF 364
                QLGH++      P ++F
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVF 290



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 20/354 (5%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G++  G LG G  E    ++     F +   + +VS    H  FVL  G V+TCG 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     G    ++   RP ++ AL     +QV+ G      +  +  V + G +  GQLG
Sbjct: 61  NDYGQLGQDKGHK---RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117

Query: 137 H-----GDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           H     G+   RP   K ++ L+    +VQ+A G  + LA++ +G ++S+G+ S+  LG 
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQ----IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   ++ +P+ + +    GI   ++ AG  H   L  SG V+ +G+   G LG GD  D+
Sbjct: 174 GSTKNQPKPQELTSL--TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDR 231

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             P  + SL+S     +   +  T VL   G V  FG   +G LG      ++    PR 
Sbjct: 232 KYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG---HNSNNHEALPRK 288

Query: 311 LDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +  L    V+Q++ G  HT+  V   GR++ FG     QLG      C  P  +
Sbjct: 289 VFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITV 342



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 16/301 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ GR HT+ + +  +V++CGS+  G LG      +    T ++  S   + QVS  + 
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQS---IQQVSCGDY 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           H   V    QVF+ G +     GH      + +R   RPR+V+ L  +   QV  G   +
Sbjct: 95  HNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHS 151

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             L+  G + + G+N+HGQLG G T ++P P+ +  L  +    QI AG S+   ++ +G
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI-PFCQIVAGGSHSFVLSKSG 210

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+ FG  +   LG G+  D   P  +++ R   + V  +S G+EH   L   G V T+G
Sbjct: 211 AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLR--SLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G  G LGH     + LP  +  L      Q+ C R      +  +G +Y FG  G G L
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQL 328

Query: 295 G 295
           G
Sbjct: 329 G 329



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H+ ++S S +VF  G +  G LG G +T      T +    +  V  +S  E 
Sbjct: 195 QIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG-DTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLT 119
           H A +   G V T G  S    GH   N     PR V  L G+   Q+  G ++   ++ 
Sbjct: 254 HTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL-PRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----------APLEEVGSVVQ-IAAGPSYM 168
             G +++ G   +GQLG   T +  TP ++            LEE   VVQ I AG    
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVVQAITAGGDQA 372

Query: 169 LAV 171
            A+
Sbjct: 373 FAL 375


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 22/301 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 230 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 287 GWMGFGSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           G   +G LG       RG       P++++ +    VSQI  G  HT+  +   G++  F
Sbjct: 261 GDNSYGQLGHDPTAEKRG-------PQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 177 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 12/328 (3%)

Query: 17  SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           +V+  G+++ G LG G  E  Q +    +++  ++ V Q +   +H   + + G++F+CG
Sbjct: 2   AVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           +N     GH     P  RP+ + +L+      V+ G   +  LT  G V + GSN+ GQL
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQL 121

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           GH   L   T   +       +VVQIA+G  + LA+T +G ++S+G+     LG G   +
Sbjct: 122 GHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGE 181

Query: 196 E-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           + + P  +++    GI +  ++ G  H  A+  SG ++ WGK   G LG  D + +  P+
Sbjct: 182 KVVTPTLVKSL--AGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQ 239

Query: 255 PLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
            L +L+ +L V+   C      F L   G V+  G   FG LG    G     + PR++ 
Sbjct: 240 QLKTLR-NLGVRYISCGDDFSAF-LTQEGGVFTCGAGTFGQLG---HGTCSNEILPRMVF 294

Query: 313 SLRAHHVSQISTGLYHTVV-VTDRGRLF 339
            L    ++QI+ G  HT+  V  RG+++
Sbjct: 295 ELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 13/282 (4%)

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP 146
           +  +  PR ++       +Q   G + T  LT  G + +CG+N HGQLGH  D L    P
Sbjct: 21  DEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRP 80

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTF 205
           + I+ LE    V  ++ G ++ LA+T  G V+S+GS S   LGH  +      PR I+T 
Sbjct: 81  QFISSLENY-IVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTI 139

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLA 264
             K   VV++++G  H +AL +SG +++WG    G LG G   +K + P  + SL     
Sbjct: 140 ATKT--VVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPI 197

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQI 322
             +      +F +  +G+++G+G   FG LG     ++D V R  P+ L +LR   V  I
Sbjct: 198 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLG-----LNDLVSRCFPQQLKTLRNLGVRYI 252

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           S G   +  +T  G +F  G     QLGH T    + P  +F
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVF 294



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 137/289 (47%), Gaps = 12/289 (4%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 57
           Q   G  HTLL++ +  +FSCG++  G LGH    T C+   R  F S+     V  VS 
Sbjct: 40  QAACGTSHTLLLTKDGKLFSCGNNDHGQLGHD---TDCLPNKRPQFISSLENYIVTHVSC 96

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H+  +   GQVF+ G NS    GH    +    PR+++ +      Q+ +G   +  
Sbjct: 97  GTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLA 156

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G + + G+N +GQLG G T ++  TP  +  L  +  +  IA G ++  AV+ +G 
Sbjct: 157 LTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGI-PIAFIACGGNHSFAVSKSGA 215

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++ +G  +   LG  +      P+ ++T R  G+    +S GD+    L   G V+T G 
Sbjct: 216 IFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRY--ISCGDDFSAFLTQEGGVFTCGA 273

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVY 284
           G  G LGHG   ++ LP  +  L      Q+   +R T   V + G +Y
Sbjct: 274 GTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 13/237 (5%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYS 179
           V+  G+  HG+LG G   D    + + P E       SV Q A G S+ L +T +G ++S
Sbjct: 3   VYCWGNTVHGELGLGGIEDE---QVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            G+  +  LGH        +P+ I +   +   V  VS G  H +AL + G V++WG   
Sbjct: 60  CGNNDHGQLGHDTDCLPNKRPQFISSL--ENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 239 CGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGH  ++   T P  + ++ +   VQ+ + +  +  L ++G ++ +G  G+G LG  
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
             G  +KV+ P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L
Sbjct: 178 TTG--EKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 6/181 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI +G++H+L ++NS  +FS G++  G LG G    + V+ T +   +   +  ++   
Sbjct: 145 VQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGG 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V +SG +F  G N+    G  D     F P+ ++ L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCF-PQQLKTLRNLGVRYISCGDDFSAFLT 263

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 177
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 264 QEGGVFTCGAGTFGQLGHGTCSNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 321

Query: 178 Y 178
           Y
Sbjct: 322 Y 322



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 282 SVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           +VY +G    G LG    G+ D +VL PR +D   +  V Q + G  HT+++T  G+LF 
Sbjct: 2   AVYCWGNTVHGELGL--GGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 341 FGDNERAQLGHDT 353
            G+N+  QLGHDT
Sbjct: 60  CGNNDHGQLGHDT 72


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 22/301 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 230 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 287 GWMGFGSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           G   +G LG       RG       P++++ +    VSQI  G  HT+  +   G++  F
Sbjct: 261 GDNSYGQLGHDPTAEKRG-------PQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 177 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4204

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           F     +VQV   ENH   V++ G++F+ G N     GH    R   R   V+ L+    
Sbjct: 30  FTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGH---CRSRTRAEPVDGLEAHNI 86

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
            QV  G   T      G V   GSN++GQLG + +    PTPK +  L     VVQIA G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL-ATKQVVQIACG 145

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            S+ +A+T  G +Y +GS S+  LG G     E +P  ++    +GI +  +S G +   
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL--QGIPISHISCGADFSF 203

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           A+  SG VY WGK   G LG GD  D+  P  L SL+      +      T  L   G V
Sbjct: 204 AVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
           + FG   +G LG      S   + PR +  L    V+QI  G  HT+  V  +GR++ FG
Sbjct: 264 FTFGAGMYGQLG---HCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFG 320

Query: 343 DNERAQLG 350
                QLG
Sbjct: 321 LGGSGQLG 328



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 13/300 (4%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
           +Q+  G  HT+L+  +  +FS G +  G LGH      C S TR   ++   A ++ QV+
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH------CRSRTRAEPVDGLEAHNITQVA 90

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               H     + G+VF  G NS+   G       +  P++V++L      Q+  G + + 
Sbjct: 91  CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSM 150

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            LT  G ++  GSN+HGQLG G +    T   +  L +   +  I+ G  +  AVT +G 
Sbjct: 151 ALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGA 210

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +G  S   LG G+  D  QP  +++ R + +  +R   G +H  AL   G V+T+G 
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR--CGMDHTAALTRDGGVFTFGA 268

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 295
           G  G LGH    ++ LP  +  L      Q+C  +  T   V + G +Y FG  G G LG
Sbjct: 269 GMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 10/260 (3%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV  G N T  +   G + + G N +GQLGH  +  R  P       E  ++ Q+A G  
Sbjct: 38  QVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGL---EAHNITQVACGAQ 94

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA    G V+++GS SN  LG   +   +  P+ +++   K   VV+++ G  H +AL
Sbjct: 95  HTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATK--QVVQIACGRSHSMAL 152

Query: 226 DSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            + G +Y WG    G LG G     +T P  +  L+      +      +F +  +G+VY
Sbjct: 153 TNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G+G   FG LG  D   +D+  +P  L SLR   V+ I  G+ HT  +T  G +F FG  
Sbjct: 213 GWGKNSFGQLGLGD--TTDRP-QPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269

Query: 345 ERAQLGHDTLRGCLEPTEIF 364
              QLGH T    + P ++ 
Sbjct: 270 MYGQLGHCTSANEMLPRKVL 289



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 10/221 (4%)

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           +P++ +P   V  +VQ+  G ++ + V  +G ++SFG      LGH       +P     
Sbjct: 24  SPRA-SPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----V 78

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSH 262
              +  ++ +V+ G +H +A +  G V+ WG    G LG   E +  +P P  + SL + 
Sbjct: 79  DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVE-ESMMPTPKMVKSLATK 137

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             VQ+   +  +  L + G +Y +G    G LG    G  +   +P ++  L+   +S I
Sbjct: 138 QVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPET--KPCLVKLLQGIPISHI 195

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           S G   +  VT  G ++G+G N   QLG        +PT++
Sbjct: 196 SCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL 236



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           VQV   +  T +++  G ++ FG   +G LG           R   +D L AH+++Q++ 
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH-----CRSRTRAEPVDGLEAHNITQVAC 91

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
           G  HT+   + G +F +G N   QLG + +   + PT   ++ +
Sbjct: 92  GAQHTLAQNEWGEVFAWGSNSNGQLGLN-VEESMMPTPKMVKSL 134



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           +  PR         + Q+  G  HT++V   G+LF FG N+  QLGH   R   EP +
Sbjct: 22  ITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVD 79


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 22/351 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   VF  G +   +L +  +T++ +    ++  +   V  ++  E HAA + + G+V
Sbjct: 225 LDSLKDVFFWGDAFGSILDYD-DTSKSLPML-VDSTNMLDVQSIACGETHAAIITKQGEV 282

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           ++ G+ SS   G++  N  + RP+LVE++  +  K V  G      +T+ G +   G   
Sbjct: 283 YSWGNESSGGIGNQ-VNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGP 341

Query: 132 H-GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           H GQL  + + L  P  K  +PL+ + SVV+IA GP +   +T +G +Y++G G+   LG
Sbjct: 342 HMGQLDCYANNLWFPH-KLFSPLDGI-SVVKIACGPWHTAIITSSGQLYTYGDGTFGVLG 399

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYC 239
           HG+     +P+ ++    KG  V  V+ G  H  A+               ++TWG    
Sbjct: 400 HGDTQGTTRPKEVEYL--KGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADR 457

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGH D+  K +P  + SL  +  +QV      T VL  TG V+  G    G LG P  
Sbjct: 458 GKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPH- 516

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             +D      +   L+   V  IS+G  H  V+T  G++F +G  +  QLG
Sbjct: 517 --ADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLG 565



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 33/299 (11%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           VF  GD       + DT++ +  P LV++   +  + +  G      +T +G V++ G+ 
Sbjct: 231 VFFWGDAFGSILDYDDTSKSL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNE 288

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNF-- 186
           + G +G+   +    PK +   E V S  V  +A G  +  AVT +G ++ +G G +   
Sbjct: 289 SSGGIGNQVNIKVSRPKLV---ESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQ 345

Query: 187 --CLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             C  +     H    P         GI VV+++ G  H   + SSG +YT+G G  G L
Sbjct: 346 LDCYANNLWFPHKLFSPL-------DGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVL 398

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFG 292
           GHGD    T P+ +  LK      V      T  +V+  S          ++ +G    G
Sbjct: 399 GHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRG 458

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG  D+ +    L P  +DSL  +   Q+S G+  TVV++  G +F  G +   QLG+
Sbjct: 459 KLGHADKKMK---LIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGN 514



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 25/273 (9%)

Query: 9   HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSF-TRINFP-------SAAHVVQVSA 57
           H   ++  S  +C  ++ G L   G GP   Q   +   + FP           VV+++ 
Sbjct: 314 HVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIAC 373

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +  SGQ++T GD +    GH DT +   RP+ VE LKG   K V  G   T  
Sbjct: 374 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVEYLKGSRVKCVACGPWHTAA 432

Query: 118 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 433 IVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGMAL 491

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + ++  GVV++ GS  +  LG+    D     A++   +    V  +S+G  HV  L +
Sbjct: 492 TVVLSITGVVFTIGSSMHGQLGN-PHADGRTVCAVEGLLKTEF-VRHISSGSSHVAVLTT 549

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 550 NGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALE 582



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I  G  H  +I+    V+S G+   G  G G +    VS  + +   ++ HV  V+    
Sbjct: 266 IACGETHAAIITKQGEVYSWGNESSG--GIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           HA  V  SG++F  G+      G  D   N   F  +L   L G+   ++  G   T  +
Sbjct: 324 HACAVTVSGELFEWGEGPHM--GQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAII 381

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 171
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 382 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLK--GSRVKCVACGPWHTAAIVEVLSD 439

Query: 172 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
               +    ++++G      LGH ++  +L P  + +        ++VS G    V L  
Sbjct: 440 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGMALTVVLSI 497

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V+T G    G LG+     +T+      LK+     + +      VL   G V+ +G
Sbjct: 498 TGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWG 557

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG  D         P ++D+L    V  IS G  +T  V
Sbjct: 558 KGKEGQLGLGDYLNRST---PTLVDALEGRQVESISCGYNYTAAV 599



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 20/217 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  IA G ++   +T  G VYS+G+ S+  +G+       +P+ +++     +HV  V+ 
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESV--ASLHVKAVAY 320

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP---LSSLKSHLAVQVCARKRKT 274
           G +H  A+  SG ++ WG+G    +G  D     L  P    S L     V++      T
Sbjct: 321 GSKHACAVTVSGELFEWGEG--PHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            ++  +G +Y +G   FG LG  D   +    RP+ ++ L+   V  ++ G +HT  + +
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVE 435

Query: 335 ----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
                     R +LF +GD +R +LGH   +  L PT
Sbjct: 436 VLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 472



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + S+ S L V+  A
Sbjct: 261 LDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVAS-LHVKAVA 319

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              K    V T S   F W     +G  D   ++     ++   L    V +I+ G +HT
Sbjct: 320 YGSKHACAV-TVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 412


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 25/306 (8%)

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           G + S   G   T   +  P  + AL+      V+AG + +  LT  G V + G+  HG+
Sbjct: 11  GQHGSLGQGDAVTQLSVLTP--IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LGHG+      P+ IA  +    V +I+AG ++ LA+T +G  YSFG G    LGHG++ 
Sbjct: 69  LGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDET 128

Query: 195 DELQPRAIQTFRRKGIH---------------VVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           D+L PR I T R  G                 +  V+AG  H + L + G VY++G G  
Sbjct: 129 DQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           GALGHGD   +  P  + +L     V +      T VL D G V+ FG + +        
Sbjct: 188 GALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG-LDYSEFPKFTE 246

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL--FGFGDNERAQLGHDTLRGC 357
           G +  VL P  L    A  ++++  G  H +++T  G+L  FG G N R  LG +T R  
Sbjct: 247 GQARFVLLPSALG--LAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNR-- 302

Query: 358 LEPTEI 363
           L PT +
Sbjct: 303 LAPTAV 308



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           +RG V + G   HG LG GD + + +  +     E   VV ++AG  + L +T  G V+S
Sbjct: 1   MRGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFS 60

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           FG+G +  LGHG +    +PR I  F      V ++SAG  H +AL   G  Y++G G  
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTA-GVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAV-----------------QVCARKRKTFVLVDTGS 282
           G LGHGDE D+ LP  + +L+ H A                   V A    + +L   G 
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR 178

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           VY FG    G+LG  DR   DK LRP ++++L    +  ++ G  +T+V+ D GR+F FG
Sbjct: 179 VYSFGAGVMGALGHGDR---DKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG 235



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 153/369 (41%), Gaps = 33/369 (8%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V S G    G LG G   TQ    T I    A  VV VSA  +H+  + + G+VF+ G+ 
Sbjct: 5   VLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                GH +     F PR +          +++AG   +  LT  G  ++ G    G+LG
Sbjct: 65  LHGRLGHGN-EETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLG 123

Query: 137 HGDTLDRPTPKSIA--------PL------EEVGSVVQ-IAAGPSYMLAVTGNGVVYSFG 181
           HGD  D+  P+ I         P+       E   V++ +AAG  + L +T +G VYSFG
Sbjct: 124 HGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFG 183

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG- 240
           +G    LGHG++   L+P  I+    +   +V ++ G  + + LD  G V+ +G  Y   
Sbjct: 184 AGVMGALGHGDRDKRLRPTMIEALADR--RIVSMACGSANTLVLDDEGRVFFFGLDYSEF 241

Query: 241 -ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
                G      LP  L   +     +V A +    +L   G +  FG    G LG  D 
Sbjct: 242 PKFTEGQARFVLLPSALGLAEE--ITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDE 299

Query: 300 GVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTD----RGRLFGFGDNERAQLGHD 352
                 L P  +        S    I+ G  H + + D      RL+ FG  ++ QL + 
Sbjct: 300 ---TNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANG 356

Query: 353 TLRGCLEPT 361
             +    PT
Sbjct: 357 HRQDRASPT 365



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 152/363 (41%), Gaps = 39/363 (10%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 58
           + ++ G +H+L+++    VFS G+ L G LGHG E T C    RI  F + A V ++SA 
Sbjct: 40  VAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEET-CFEPRRIAFFDTTAGVAKISAG 98

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---------------RPIFRPRLVEALKGV 103
             H+  + + G+ ++ G       GH D                  P    R+ E     
Sbjct: 99  TTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDP 158

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
             + V AG   +  LT  G V++ G+   G LGHGD   R  P  I  L +   +V +A 
Sbjct: 159 VIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-RIVSMAC 217

Query: 164 GPSYMLAVTGNGVVYSFG-SGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           G +  L +   G V+ FG   S F     G+    L P A+         +  V AG+ H
Sbjct: 218 GSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEE----ITEVRAGEGH 273

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLV 278
            + L   G +  +G G  G LG GDE ++  P  +   S+  + + + +    +    LV
Sbjct: 274 CLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALV 333

Query: 279 DTGS----VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA---HHV--SQISTGLYHT 329
           D       +Y FG    G L    R   D+        SL A    H+  + IS G  H+
Sbjct: 334 DVPGEGPRLYAFGSGDQGQLANGHR--QDRASPTATTTSLPALLHQHIVPAAISAGKAHS 391

Query: 330 VVV 332
           +V+
Sbjct: 392 LVL 394



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 229 GYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V + G G  G+LG GD + + ++  P+ +L++H  V V A    + VL + G V+ FG
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
               G LG  +     +  R    D+     V++IS G  H++ +T  G+ + FG     
Sbjct: 63  NGLHGRLGHGNEETCFEPRRIAFFDTTAG--VAKISAGTTHSLALTKDGKAYSFGFGMFG 120

Query: 348 QLGHDTLRGCLEPTEIFIQ 366
           +LGH      L P EI ++
Sbjct: 121 RLGHGDETDQLLPREITLR 139


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 17/337 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 57
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4180

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +A LE  ++G   ++A G ++ L V+ +G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG---EVACGLNHTLVVSTDG 4296

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4354

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ + +L       +      T  L  +G VY +G    G L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            G    G ++ V  P ++ SL+   V QIS G  H+  
Sbjct: 4415 GL---GHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 402 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 461

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 462 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 519

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 520 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 575

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 576 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 635

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 636 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 688

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 689 YAWGNNSMGQCGQ 701



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 529

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 530 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 585

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 586 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 644

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 645 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 700

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 701 QGNSTGPITKPKKVSGLDGVAIQQISA 727



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS     QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4115 PSFCQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4172

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4173 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4231

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  +  V+ G  H 
Sbjct: 4232 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAAL--EGYQIGEVACGLNHT 4289

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            + + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4290 LVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4349

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ + +L    V  I+ G  HT+ ++  G ++ +
Sbjct: 4350 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAW 4406

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4407 GSNSEGQLGLGHTNHVREPT 4426



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G+  HGQL   G     P P             Q+  G +    +  NG V + G 
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSP-----SFCQAQQVICGQNCTFVIQANGTVLACGE 4144

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4145 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4205 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4262

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + +++ GL HT+VV TD   ++ FGD +  +LG
Sbjct: 4263 SNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 376 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 431

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 432 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 490

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 491 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 547



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 631 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 688

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 689 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 728



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG G  G L      +   P P  S     A QV   +  TFV+   G+V   G   
Sbjct: 4090 VFLWGAGRHGQLAEAGR-NAVSPPPSPSFCQ--AQQVICGQNCTFVIQANGTVLACGEGS 4146

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4147 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4204 KLGHGNSDRQRRPRQIEALQGEE 4226


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4204

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4257

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAW 4314

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT I +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLITV 4338



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPV---AAP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 4052

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4170

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PR +    G+   Q  +G   +  L     V++CG N+ GQLG     +   P+   P+
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE---PI 67

Query: 153 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKG 209
           + +G+  +  ++ G  + +AV   G V+++G+GS   LG GE +   L P  I+T    G
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--GG 125

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVC 268
           I +++VS G  H +AL   G V++WGK   G LG G     +  P+ ++SL+     QV 
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVA 185

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
           A    +F L  TG+ YG+G    G L       + ++ +P  +D+L+   V  IS G  H
Sbjct: 186 AGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEH 245

Query: 329 TVVVTDRGRLFGFGDNERAQLGHD 352
           T V+T  G++F FGDN   QL ++
Sbjct: 246 TAVLTKDGQVFTFGDNSSGQLQNN 269



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 16/311 (5%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 101
           R+N      ++Q ++ E H+  +  + +V++CGDNS    G  R+ N    +P  ++AL 
Sbjct: 14  RLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE--QPEPIQALG 71

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQ 160
            +    V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q
Sbjct: 72  TLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGI-KIIQ 130

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGD 219
           ++ G  + LA++ +G V+S+G  S   LG G Q   +  P+ + +   +GI + +V+AG 
Sbjct: 131 VSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSL--EGIPLAQVAAGG 188

Query: 220 EHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            H  AL  +G  Y WG    G L   G    +  + P  + +LK+   + +      T V
Sbjct: 189 SHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAV 248

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDR 335
           L   G V+ FG    G L    RG   K   P++++ ++   VS+I  G YHT+  V   
Sbjct: 249 LTKDGQVFTFGDNSSGQLQNNPRG---KRRGPQLVEGIKG-QVSKIECGSYHTIAYVYTT 304

Query: 336 GRLFGFGDNER 346
           G++   G   R
Sbjct: 305 GQVVSLGHGPR 315



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ SN  V+SCG +  G LG         PE  Q +    I+       
Sbjct: 24  LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDL------ 77

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G 
Sbjct: 78  --VSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGH 135

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+  G V + G N+ GQLG G  +  + +P+ +  LE +  + Q+AAG S+  A+
Sbjct: 136 YHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI-PLAQVAAGGSHSFAL 194

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  Y +GS S   L    ++  +Q   P +I   +  G  V+ +S G EH   L   
Sbjct: 195 SLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLG--VIYISCGYEHTAVLTKD 252

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G L +     +  P+ +  +K  ++   C        +  TG V   G
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D  QPR +    R G+ +++ ++G+ H + L S+  VY+ G    G LG   E +   PE
Sbjct: 8   DSRQPRRLNG--RDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
           P+ +L +     V   K  +  +   G V+ +G    G LG  +    +  L P  + +L
Sbjct: 66  PIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGE--FKEINLMPMRIKTL 123

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               + Q+S G YH++ +++ G++F +G N + QLG
Sbjct: 124 GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLG 159


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3562

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3563 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3621

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSMDG 3678

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 3736

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 3797 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 100
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 221 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 280 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3497 PSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3554

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3555 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3613

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 3614 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3671

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            VA+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3672 VAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 3731

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 3732 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAW 3788

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT I +
Sbjct: 3789 GSNSEGQLGLGHTNHVREPTLITV 3812



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL  +    VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 13/246 (5%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVMVPVA---AP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 3526

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3527 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3587 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 3644

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL---FGFGDNERAQLGHDTLRGCL 358
            S+K L P  + +L  + + Q++ GL HTV V+  G +   FG GD  +  LG+ T +   
Sbjct: 3645 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSP 3703

Query: 359  EPTEIF 364
            +  +I 
Sbjct: 3704 QKVDIL 3709



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3472 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 3528

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3529 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3585

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 3586 KLGHGNSDRQRRPRQIEALQGEE 3608



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 16/292 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASEN 60
           I  G+  T  ++++  V++ G S  G LG G      +   ++    ++HVV Q+S   N
Sbjct: 558 IACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRN 617

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HAA      + F  G N+    G    +  +  P  + +L+    + +  G   T   T 
Sbjct: 618 HAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTN 677

Query: 121 RGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTG 173
            G V +CG   HGQLGHGD      L +  P     +E  G   +V+++AG     A+T 
Sbjct: 678 TGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITN 737

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            G ++++G G  + LGH    +E  PR ++ F +  I VV VS GD H++ALD SG  Y+
Sbjct: 738 KGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK--IRVVDVSIGDSHMLALDYSGLPYS 795

Query: 234 WGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           WG G  G LGHG+  ++ TLP P+   +  L   +  R    F  +  GS Y
Sbjct: 796 WGNGSAGQLGHGEMCERETLPRPIMLCRRGLRDGIEER----FFDIQWGSFY 843



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 18/296 (6%)

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           LQ   VF  GD  +   G++ +      P +V A + V  K    G   T FL+  G V 
Sbjct: 87  LQGSHVFMWGDGENGKLGNQ-SEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVL 145

Query: 126 TCGSNTHGQLGHGD-TLDRPTP-----------KSIAPLEEVGSVVQIAAGPSYMLAVTG 173
           +CGSN +GQLG GD  L R TP           K  A ++ + ++V IAAG  + LA+  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            G ++S+GSGS   LG G   +   PR + + +     VV ++ G  H  A+ + G V+T
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNS--KVVHIACGAHHTAAITTVGDVWT 263

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WGKG  G LGH    ++  P   +SL+   A ++      T V++ +G +Y  G    G 
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           LG  D   +D+++ P ++       V  I      ++ +T+ G++F FG+     L
Sbjct: 324 LGLGD--ATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 15/287 (5%)

Query: 69   GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
            G VF  G+++    G R   +    P L+++L       ++A  + + F+T  G ++  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
             + HG+LG G     PTP  I  L  V  ++++A G  + LA+T    VY++G G     
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTV-KIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 189  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-E 247
            G    +D L+P+ + +       ++ V AG  H  AL   G ++ WGK   G LG G   
Sbjct: 1728 GVSNTNDVLEPQELSSL--AACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 248  IDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 303
              +  P  +S+L    + V + A      + V + +++  G    G LG   F DR    
Sbjct: 1786 AAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLT 1845

Query: 304  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             V      D+L    +   S G  HT  V+  G L  +G+    QLG
Sbjct: 1846 AV------DALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 170/430 (39%), Gaps = 81/430 (18%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQV 55
            + I  GR+H + L S   V S G+   G LG        T Q V       P      ++
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-----CKI 1328

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--N 113
                 H+A +L+SG++   G N     GH DT +    PR+ + L+ +  K  TAGL  N
Sbjct: 1329 LCGGWHSAAILESGKILLWGKNVYGQLGHGDT-KSCSAPRVNQYLR-LEGKVRTAGLGAN 1386

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSI-APLEEVG--SVVQIAAGPSYM 168
             T  + +   V   GSN  GQLG    LD P  T K++   +EE+   ++ Q+AAG  + 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHS 1442

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            LA++  G V+S+G      LGH    D+L P  +    +    V  ++ G     A+ + 
Sbjct: 1443 LALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAK 1502

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK---------SHLAVQVCARKRKTFVL-- 277
            G V+TWG G  G LGH  ++    P  +              H+A  V   + KT  L  
Sbjct: 1503 GEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTG 1562

Query: 278  --------------VDTGSVYG------------------------------FGWMGFGS 293
                          +  GSV G                              +G    G 
Sbjct: 1563 SSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQ 1622

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            LG   RG+      P ++ SL A  +  IS     +  VTD G L+  G +E  +LG   
Sbjct: 1623 LGI--RGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGH 1679

Query: 354  LRGCLEPTEI 363
            +     P EI
Sbjct: 1680 MAPAPTPVEI 1689



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 17/308 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFT----RINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           +++ G  + G LGHG E T+         RI   +   VV ++  ++  A +  +G+V+T
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYT 576

Query: 74  CGDNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
            G ++    G   + +P  I  P+LV+ L      Q++ G N     T        GSNT
Sbjct: 577 WGKSAQGKLG-LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNT 635

Query: 132 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
            GQLG  H  +   P P  I  L E  ++  IA G  + L  T  G V S G G +  LG
Sbjct: 636 FGQLGIPHISSY-MPDPYEITSLREA-NIRSIACGGWHTLISTNTGSVMSCGKGWHGQLG 693

Query: 190 HGEQHDELQPRAIQTFRRKGIH------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           HG+            + +K +       +V+VSAG E   A+ + G ++TWGKG    LG
Sbjct: 694 HGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLG 753

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           H    ++  P  +        V V         L  +G  Y +G    G LG  +    +
Sbjct: 754 HESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERE 813

Query: 304 KVLRPRIL 311
            + RP +L
Sbjct: 814 TLPRPIML 821



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 12/253 (4%)

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            H++T G   +G+LGHG      TP+ I        +V++A G  + LA + +G VY++G+
Sbjct: 1180 HIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 183  GSNFCLGHGEQHD------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            G    LG  E  D         P+ +   +R    ++ ++ G  H + L S   V +WG 
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKR--YFILSIACGRWHNMTLTSERQVLSWGA 1297

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG    + K  P+ + +L      ++      +  ++++G +  +G   +G LG 
Sbjct: 1298 GEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGH 1357

Query: 297  PDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             D   +     PR+   LR    V     G  HT+VV    ++F  G N   QLG D   
Sbjct: 1358 GD---TKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPS 1414

Query: 356  GCLEPTEIFIQEM 368
               +   + I+E+
Sbjct: 1415 RTGKNVPVSIEEL 1427



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 163/408 (39%), Gaps = 67/408 (16%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G  HTL+I  S  ++S G++  G LG G  T + +      F +   V+ + A   
Sbjct: 296 KIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KVIDIDAKGC 354

Query: 61  HAAFVLQSGQVFTCGDNSS--------FCCGHRDTNRPIFRPRLV----------EALKG 102
            +  +  +G+VF  G+ +         F  G   ++  I   R            +  + 
Sbjct: 355 RSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414

Query: 103 VP-CKQVTAGLNFTGFLTIRGHVHT-CGSN------------THGQLGHGDTLDRPTPKS 148
            P   +  +      F  I+G V   CG N            T   +    +    +  S
Sbjct: 415 RPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDIS 474

Query: 149 IAPLEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
            A LE+  S                   VQ+   PS      G+G +Y++G G    LGH
Sbjct: 475 RASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSR----EGDGYIYTYGKGVFGRLGH 530

Query: 191 GEQHDELQ-----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG--ALG 243
           G ++   +     P+ I+T  +  + VV ++ G +   AL  +G VYTWGK   G   LG
Sbjct: 531 GVEYTRSEESVKHPKRIETLAK--MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLG 588

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            G  +   +P+ +  L SH+  Q+   +       D    + +G   FG LG P   +S 
Sbjct: 589 SGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPH--ISS 646

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +  P  + SLR  ++  I+ G +HT++ T+ G +   G     QLGH
Sbjct: 647 YMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGH 694



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 27/302 (8%)

Query: 6   GRYHTLLIS-NSSVFSCGSSLCGVLGHG------------PETTQCVSFTRINFPSAAHV 52
           G+ HTL +S +  V SCGS++ G LG G            P   + +   +    S  ++
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V ++A   H+  +  +G++F+ G  S    G   D N     PR V +L+      +  G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE--SPRFVASLQNSKVVHIACG 248

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            + T  +T  G V T G    GQLGH    +  +P+  A L + G+  +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGA-QKIRCGDDHTLVI 307

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             +G +YS G+ ++  LG G+  D + P  +  F  +   V+ + A     +AL ++G V
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE--KVIDIDAKGCRSIALTNTGKV 365

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           + +G      L         LP      KS L + V       F + DTG +  F W  F
Sbjct: 366 FAFGNETEPHLNRIPRFVAGLP------KSDLIIAVARTAHFDFAISDTGQL--FRWRPF 417

Query: 292 GS 293
            S
Sbjct: 418 SS 419



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 141/353 (39%), Gaps = 12/353 (3%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
            RY   L     +++ G  + G LGHG  T         +FPS   +V+V+    H+    
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 67   QSGQVFTCGDNSSFCCGHRDTNRPI-----FRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              G V+  G       G  +    +     F P+ V  LK      +  G      LT  
Sbjct: 1230 FDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSE 1289

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
              V + G+   GQLG    L + TP+ +  L+      +I  G  +  A+  +G +  +G
Sbjct: 1290 RQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-CKILCGGWHSAAILESGKILLWG 1348

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                  LGHG+      PR  Q  R +G  V     G  H + +  +  V+  G    G 
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQ 1407

Query: 242  LGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LG  D     K +P  +  L      QV A  + +  L   G V+ +G   FG LG    
Sbjct: 1408 LGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGH--E 1465

Query: 300  GVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             ++DK+    +L+  +    V  I+ G   +  ++ +G +F +G+ E  +LGH
Sbjct: 1466 TITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGH 1518



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPT-----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           G+++T G    G+LGHG    R       PK I  L ++ SVV IA G     A+T  G 
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKM-SVVFIACGKDSTAALTDTGK 573

Query: 177 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYT 233
           VY++G  +     LG G+    + P+ +Q       HVV ++S G  H          + 
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSS---HVVCQISLGRNHAACSTDMHKFFV 630

Query: 234 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWM 289
           WG    G LG    I   +P+P  ++SL+      +      T +  +TGSV   G GW 
Sbjct: 631 WGSNTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH 689

Query: 290 G-FGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G  G   +       K L    +I++      + ++S G   +  +T++GRLF +G  + 
Sbjct: 690 GQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDE 749

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH++ +    P E+
Sbjct: 750 YQLGHESSKNEAYPREV 766



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 166/417 (39%), Gaps = 65/417 (15%)

Query: 6    GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            G  HTL++   + VF+ GS++ G LG   P  T       I   +  ++ QV+A + H+ 
Sbjct: 1384 GANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSL 1443

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRG 122
             +   G+V++ G +     GH      +    L+E  K  P  K +  G  F+  ++ +G
Sbjct: 1444 ALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKG 1503

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM-----------LAV 171
             V T G+   G+LGH   +    P  I    EV   VQIA G  +M           + +
Sbjct: 1504 EVFTWGNGESGELGHAPKVLTYAPSLIKDFSEV---VQIACGFKHMAGIVFKPRMKTIEL 1560

Query: 172  TG------NGVVYS--FGSGS------------------NFCLGHGEQHD---------- 195
            TG      N   +S    +GS                   F   + ++H           
Sbjct: 1561 TGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTC 1620

Query: 196  -ELQPRAIQTFRRKGI-------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
             +L  R +Q  R   +        +V +SA  +    +  SG +Y  G    G LG G  
Sbjct: 1621 GQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680

Query: 248  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
                 P  + SL +   ++V         L +   VY +G   +G+ G  +   ++ VL 
Sbjct: 1681 APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN---TNDVLE 1737

Query: 308  PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 363
            P+ L SL A  +  +  G +H+  ++  G LF +G N   QLG  T     + PT+I
Sbjct: 1738 PQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKI 1794



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            A   Y + + G   +Y++G G N  LGHG       P+ I +F      +V V+ G EH 
Sbjct: 1167 ANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSF-PSNTKIVEVACGCEHS 1225

Query: 223  VALDSSGYVYTWGKGYCGALGHGDEIDKTL------PEPLSSLKSHLAVQVCARKRKTFV 276
            +A    G VY WG G  G LG  +  D         P+P+ +LK +  + +   +     
Sbjct: 1226 LARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMT 1285

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            L     V  +G   FG LG  D  +S     P+++ +L      +I  G +H+  + + G
Sbjct: 1286 LTSERQVLSWGAGEFGQLGL-DHNLSKGT--PQMVKALDGRAPCKILCGGWHSAAILESG 1342

Query: 337  RLFGFGDNERAQLGHDTLRGCLEP 360
            ++  +G N   QLGH   + C  P
Sbjct: 1343 KILLWGKNVYGQLGHGDTKSCSAP 1366



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 28/366 (7%)

Query: 18   VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 75
            VF  G   CG LG  G +  +  S  +     A  +V +SA+ + +AFV  SG ++  G 
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAARSPSLMQSLL--ATSIVHISANSDMSAFVTDSGSLYVSGG 1669

Query: 76   -DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
             ++     GH     P   P  + +L  V   +V  G      LT    V+  G    G 
Sbjct: 1670 SEHGRLGLGHM---APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGN 1726

Query: 135  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 193
             G  +T D   P+ ++ L    S++ + AG  +  A++  G ++ +G  SN  LG G   
Sbjct: 1727 AGVSNTNDVLEPQELSSLAAC-SIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--SSGYVYTWGKGYCGALGHGDEIDKT 251
              E  P  I      G+ V+ VS G  H   L   +S  ++T G    G LG GD +D++
Sbjct: 1786 AAEDSPTKISNL--DGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRS 1842

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
                + +L     V        T  +   G +  +G    G LG    G+S  +  P  L
Sbjct: 1843 TLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGL-KAGLSKDIENPVQL 1901

Query: 312  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR------------GCLE 359
             ++    + ++  G   T+VV+++G L+  G      LG ++ R            G ++
Sbjct: 1902 PAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDVSFREVEGLIQ 1961

Query: 360  PTEIFI 365
            PT+I +
Sbjct: 1962 PTQIAV 1967



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYT 233
           V+ +G G N  LG+  Q +E+Q  P  +  FR     +V+V A G +H + L + G V +
Sbjct: 92  VFMWGDGENGKLGN--QSEEIQHVPYIVPAFRNV---LVKVCALGKQHTLFLSADGVVLS 146

Query: 234 WGKGYCGALGHGDE-IDKTLP--EP-----LSSLKSHLA-----VQVCARKRKTFVLVDT 280
            G    G LG GD  + ++ P  EP     L  L++ +      V + A    +  L DT
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G ++ +G   +G LG    G       PR + SL+   V  I+ G +HT  +T  G ++ 
Sbjct: 207 GKIFSWGSGSWGKLGI---GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263

Query: 341 FGDNERAQLGHDTLRGCLEP 360
           +G   R QLGH +++    P
Sbjct: 264 WGKGLRGQLGHKSVKEEFSP 283



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M++  G YH L L     V++ G    G  G    T   +    ++  +A  ++ V A  
Sbjct: 1698 MKVACGTYHCLALTEEKRVYAWGDGKWGNAGVS-NTNDVLEPQELSSLAACSIIGVHAGG 1756

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
             H+A + Q G +F  G NS+   G   T+     P  +  L GV    V+ G N +  L 
Sbjct: 1757 FHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLM 1815

Query: 119  -TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
                 ++ TCG N +GQLG GD +DR T  ++  L++   +V  + G ++  AV+  G +
Sbjct: 1816 QVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR-QIVSASCGAAHTAAVSQYGDL 1874

Query: 178  YSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
             ++G+G N  LG   G   D   P  +       +  V+V  G E  + +   G +Y   
Sbjct: 1875 ITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPM--VKVVCGQEVTIVVSEKGELYM-- 1930

Query: 236  KGYCGALGHG 245
             GY   +G G
Sbjct: 1931 AGYESTIGLG 1940



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 206  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 264
             +K    +R  A   + V L+   ++YTWG G  G LGHG     + P+ ++S  S+   
Sbjct: 1156 EKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKI 1215

Query: 265  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LRPRILDSLRAHHVSQ 321
            V+V      +      G VY +G    G LG  +     K+     P+ + +L+ + +  
Sbjct: 1216 VEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILS 1275

Query: 322  ISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            I+ G +H + +T   ++  +G  E  QLG D
Sbjct: 1276 IACGRWHNMTLTSERQVLSWGAGEFGQLGLD 1306



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 157/390 (40%), Gaps = 48/390 (12%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           + I  G +HT  I+    V++ G  L G LGH  ++ +     R+N         ++   
Sbjct: 243 VHIACGAHHTAAITTVGDVWTWGKGLRGQLGH--KSVKEEFSPRLNASLRKCGAQKIRCG 300

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           ++H   +L+SGQ+++ G N+    G  D    I  P LV          + A    +  L
Sbjct: 301 DDHTLVILRSGQLYSMGANTHGQLGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIAL 359

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G+ T   L          P+ +A L +   ++ +A    +  A++  G ++
Sbjct: 360 TNTGKVFAFGNETEPHLNR-------IPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLF 412

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVV-----------ALD 226
            +   S+         +E   R +++F   KG  VVR+  G  H+            A+ 
Sbjct: 413 RWRPFSS---------EEESSRMLESFHAIKG--VVRMFCGHNHMAVICSPEMGCTQAMI 461

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           S     ++      A       +K LP  L +   +L      + R +      G +Y +
Sbjct: 462 SRNKSTSFSSDISRASLEKFPSEKILP-ALGTNTEYLDEFATVQVRDSPSREGDGYIYTY 520

Query: 287 GWMGFGSLGFPDRGV-----SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           G   FG LG    GV      + V  P+ +++L    V  I+ G   T  +TD G+++ +
Sbjct: 521 GKGVFGRLG---HGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTW 577

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
           G + + +LG     G  +P  I + ++ +D
Sbjct: 578 GKSAQGKLG----LGSGKPLAIVVPQLVQD 603


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 165/372 (44%), Gaps = 21/372 (5%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI+ G YHTL +  + +V++ G++    LG G  T    S T +        + ++    
Sbjct: 595 QISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTD---SSTPVQVSGLTDAIAIAGGVY 651

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +   G V+T G N+S   G   T   I R   V+ +       +  G   T  L  
Sbjct: 652 HTIALKSDGTVWTWGWNNSGQLGDGTT---INRSTPVQVIGLTDVIAIAGGDYHTIALKS 708

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V T G N +GQLG G T +R TP  +  L ++   + IA G  + +A+  +G V+++
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADI---IAIAGGYVHSIALKSDGTVWAW 765

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG G   D L P  +         ++ ++ G  H +AL S G V+ WG    G
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGLT----DIIAIAGGYIHTIALKSDGTVWAWGHNEGG 821

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   + + P  +S L   +AV   AR   T  L   G+V+ +G   +G LG  D  
Sbjct: 822 QLGDGTTTNSSTPVQVSGLTDVIAV--TARLYHTIALKSDGTVWTWGRNIYGQLG--DGS 877

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +++ L  +++       V  I+ G YHT+ +   G ++ +G N   QLG+ + +    P
Sbjct: 878 TTERSLPVQVIG---LTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP 934

Query: 361 TEIFIQEMEEDT 372
                 +M   T
Sbjct: 935 VRSLRYDMNSVT 946



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 23/369 (6%)

Query: 2    QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            QI+ G YHTL +  + +V++CG++  G LG G    +    T +       V+ ++  + 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS---TPVQVSGLTDVIAIAGGDY 1099

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +     V+  G NS    G    TNR I  P  V  L  +    +  G   T  L 
Sbjct: 1100 HTIALKSDNTVWAWGSNSYGQLGDGTITNRSI--PTPVTYLTNIIA--IAGGYVHTIALK 1155

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V   G N +GQLG G T +R TP  ++ L +V   + IA    + +A+  +G V++
Sbjct: 1156 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV---IAIAGEYVHTVALKSDGTVWA 1212

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+TWG    
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPVQVSGLT----DVIAIAGGYVHTIALKSDGTVWTWGWNNS 1268

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G  I++  P  +S L    A+ +      T  L    +V+ +G   +G LG    
Sbjct: 1269 GQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG---D 1323

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            G +   L P  +  L       I+ G YHT+ +     ++ +G N   QLG  +    L 
Sbjct: 1324 GTTINRLTPVQVSGLT--DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLT 1381

Query: 360  PTEIFIQEM 368
            P +  +  +
Sbjct: 1382 PAQCLLSPI 1390



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 27/373 (7%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI+ G YHTL +  + +V++ G++  G LG    T +    T +       V+ ++    
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS---TPVQVSGLTDVIAIAGGAY 203

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           H   +   G V+  G+N     G     D + P+    L + +       +  G   T  
Sbjct: 204 HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIA------IAGGYAHTIA 257

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           L   G V   G N  G+LG G T +R  P  +  L +V   + IA G ++ +A+  +G V
Sbjct: 258 LKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV---IAIAGGNAHTIALKSDGTV 314

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G   +   P  +         V+ ++ G  H + L S G V+TWG  
Sbjct: 315 WAWGDNEGGQLGDGSTTNRSTPVKVSGLA----DVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G   +++ P  +S L   +A+        T  +   G+++ +G+  +G LG  
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQLG-- 426

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G +     P  ++ L    V  I+ G YHT+ +   G ++ +G N   QLG  ++   
Sbjct: 427 -DGTTINSSTPVQVNGLT--DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNR 483

Query: 358 LEPTEIFIQEMEE 370
             P +  +  M+ 
Sbjct: 484 STPAQRSLSGMKS 496



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)

Query: 103  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
            +P  Q++AG   T  L   G V  CG+N +GQLG G T++R TP  ++ L +   V+ IA
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIA 1095

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  + +A+  +  V+++GS S   LG G     +  R+I T      +++ ++ G  H 
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDG----TITNRSIPTPVTYLTNIIAIAGGYVHT 1151

Query: 223  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            +AL S G V+ WG    G LG G   +++ P  +S L   +A  +      T  L   G+
Sbjct: 1152 IALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIA--IAGEYVHTVALKSDGT 1209

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            V+ +G+ G+G LG    G +     P  +  L    V  I+ G  HT+ +   G ++ +G
Sbjct: 1210 VWAWGYNGYGQLG---DGSTTNRSTPVQVSGLT--DVIAIAGGYVHTIALKSDGTVWTWG 1264

Query: 343  DNERAQLGHDTLRGCLEPTEI 363
             N   QLG  T    L P ++
Sbjct: 1265 WNNSGQLGDGTTINRLTPVQV 1285



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 14/261 (5%)

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           +P  Q++AG   T  L   G V   G+N + QLG G T D  TP  ++ L +    + IA
Sbjct: 591 MPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA---IAIA 647

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G  + +A+  +G V+++G  ++  LG G   +   P  +         V+ ++ GD H 
Sbjct: 648 GGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLT----DVIAIAGGDYHT 703

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +AL S G V+TWG  Y G LG G   +++ P  +  L   +A  +      +  L   G+
Sbjct: 704 IALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIA--IAGGYVHSIALKSDGT 761

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V+ +G+ G+G LG  D   +D  L P  +  L    +  I+ G  HT+ +   G ++ +G
Sbjct: 762 VWAWGYNGYGQLG--DGSTTDH-LTPVQVSGLT--DIIAIAGGYIHTIALKSDGTVWAWG 816

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
            NE  QLG  T      P ++
Sbjct: 817 HNEGGQLGDGTTTNSSTPVQV 837



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           +P  Q++AG   T  L   G V T G+N +GQLG   T +R TP  ++ L +   V+ IA
Sbjct: 143 IPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIA 199

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G  + +A+  +G V+++G+     LG G   D   P  +         V+ ++ G  H 
Sbjct: 200 GGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHT 255

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +AL S G V+ WG    G LG G   ++++P  +  L   +A  +      T  L   G+
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIA--IAGGNAHTIALKSDGT 313

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V+ +G    G LG    G +     P  +  L    V  I+ G  HT+V+   G ++ +G
Sbjct: 314 VWAWGDNEGGQLG---DGSTTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWG 368

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
            NE  QLG  +      P ++
Sbjct: 369 HNEGGQLGDGSTTNRSTPVQV 389



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 21/328 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G YHT+ L S+ +V++ G++  G LG G  T +    T +       V+ ++   
Sbjct: 196 IAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRS---TPVQVSGLTDVIAIAGGY 252

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H   +   G V+  GDN     G    TNR I  P  V  L  V    +  G   T  L
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIA--IAGGNAHTIAL 308

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N  GQLG G T +R TP  ++ L +V   + IA G S+ + +  +G V+
Sbjct: 309 KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV---IAIAGGYSHTIVLRSDGTVW 365

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LG G   +   P  +         V+ ++ G  H +A+ S G ++ WG  +
Sbjct: 366 TWGHNEGGQLGDGSTTNRSTPVQVSGLA----DVIAIAGGVYHTIAVKSDGTMWAWGYNW 421

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G  I+ + P  ++ L   +A  +      T  +   G+V+ +G+  +G LG  D
Sbjct: 422 YGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYYHTIAMKSDGAVWTWGFNYYGQLG--D 477

Query: 299 RGVSDKVL-RPRILDSLRAHHVSQISTG 325
             ++++     R L  +++     ++TG
Sbjct: 478 GSITNRSTPAQRSLSGMKSVATPTVTTG 505



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 155/407 (38%), Gaps = 59/407 (14%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + I  G YHT+ L S+ +V++ G +  G LG G  T +    T +     A ++ ++   
Sbjct: 694  IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS---TPVQVKGLADIIAIAGGY 750

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             H+  +   G V+  G N     G   T   +  P  V  L  +    +  G   T  L 
Sbjct: 751  VHSIALKSDGTVWAWGYNGYGQLGDGSTTDHL-TPVQVSGLTDIIA--IAGGYIHTIALK 807

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V   G N  GQLG G T +  TP  ++ L +V   + + A   + +A+  +G V++
Sbjct: 808  SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDV---IAVTARLYHTIALKSDGTVWT 864

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+ W  GY 
Sbjct: 865  WGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAW--GYN 918

Query: 240  GALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMG---FGSLG 295
            G    G+   K    P+ SL+  + +V   A    +   V   SV   GW+      +  
Sbjct: 919  GNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTA 978

Query: 296  FPDRGVSDKV-----------------------LRPRILDSLR--AHHV----------- 319
            + D G S  V                       L P      R  A +            
Sbjct: 979  WFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIF 1038

Query: 320  ---SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               SQIS G YHT+ +   G ++  G N   QLG  T      P ++
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQV 1085


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 129/261 (49%), Gaps = 6/261 (2%)

Query: 94  PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           PR  +A   G   +Q  +G   +  L   G +H+CG N+ GQLG         PK I  L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIH 211
           + +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    GI 
Sbjct: 73  DNL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTL--TGIK 129

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 270
           +++VS G  H +AL   G V++WG    G LG G E   +  P+ + SL      QV A 
Sbjct: 130 IIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAG 189

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +F L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT 
Sbjct: 190 GAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTA 249

Query: 331 VVTDRGRLFGFGDNERAQLGH 351
           V+T  G++F FG N   QLGH
Sbjct: 250 VLTQTGKVFTFGGNSYGQLGH 270



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 14/301 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           + A + Q ++ E H+  +L +G++ +CGDNS    G +   R    P+ +  L  +    
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDE-HPKRIRTLDNLRVDL 79

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPS 166
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI-KIIQVSCGHY 138

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA++  G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  AL
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSL--DGIPLTQVAAGGAHSFAL 196

Query: 226 DSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             SG  + WG    G L    +   +    P  + +LK+   + +      T VL  TG 
Sbjct: 197 SLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGK 256

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG   +G LG       +    P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 257 VFTFGGNSYGQLGHSPTAEKEG---PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 23/298 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           Q  +G  H+LL+ SN  + SCG +  G LG         P+  + +   R++        
Sbjct: 27  QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDL------- 79

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G  
Sbjct: 80  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHY 138

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +  L+  G V + GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGI-PLTQVAAGGAHSFALS 197

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +G  + +GS +   L   + +  +Q   PR+I   +  G  V+ +S G EH   L  +G
Sbjct: 198 LSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG--VIYISCGYEHTAVLTQTG 255

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V+T+G    G LGH    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 256 KVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S    VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +  SG  F  G N++     R  N P+   +PR + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAV 250

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 176
           LT  G V T G N++GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGK 308

Query: 177 VYSFGSG 183
           V SFG G
Sbjct: 309 VVSFGRG 315


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4208

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 16/341 (4%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 58
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 117
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG---EVSCGSSHTIALSKDGRT 582

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 698

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
                +  + +P+ +  L    + QIS G  H++  T   R
Sbjct: 699 -QGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTALPR 738



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 22/301 (7%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNF 114
            +  FV+ + G V  CG  S    G  D+N      +L      ++K V   + + G   
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--H 469

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT +
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYT 233
           G +Y++G G    LGHG+ +     R I T  +  I+V  VS G  H +AL   G  V++
Sbjct: 530 GELYTWGEGDFGRLGHGDSNS----RNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWS 585

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---WMG 290
           +G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    +G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GS            LRP++++ L A  +  IS G  H + ++    ++ +G+N   Q G
Sbjct: 646 CGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 351 H 351
            
Sbjct: 699 Q 699



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 104  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQI 161
            P +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V  
Sbjct: 4031 PAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTS 4090

Query: 162  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                 + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H
Sbjct: 4091 CGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKH 4148

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 280
               + + G ++T+G G  G LG G+  +K LPE +++L+ +   QV C       V  D 
Sbjct: 4149 SAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG 4208

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
              V+ FG   +G LG    G S     P+ +D L    + +++ G   +V +T  G ++ 
Sbjct: 4209 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 341  FGDNERAQLGHDTLRGCLEPTEI 363
            FG +    L     R    P ++
Sbjct: 4266 FGQDRLIGLPEGRARNHNRPQQV 4288



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSPAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4261

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAW 4318

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 4319 GSNSEGQLGLGHTNHVREPTLVTV 4342



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 13/231 (5%)

Query: 124  VHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V+  G+  HGQL     + +      S +P +      Q+  G +    +  NG V + G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSFSPAQ------QVVCGQNCTFVIQANGTVLACG 4055

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCG 240
             GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G
Sbjct: 4056 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +  
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN-- 4173

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
             S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4174 TSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4223



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLASSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGS 4058

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138


>gi|325186854|emb|CCA21400.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
          Length = 4666

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 33/360 (9%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           + V+SCG +  G LGHG +T    SFTR+       V +++A   H+  + + G+V TCG
Sbjct: 580 AEVWSCGQNSYGELGHG-DTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLTCG 638

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSN 130
            N +  CGH  T R  +  ++ E    +   Q+++  +F G      L+  G V TCG N
Sbjct: 639 YNDNGQCGHNSTKRASYFKKVSE----LSSAQISSIYSFNGCEHSLLLSNDGRVATCGFN 694

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN------GVVYSFGSGS 184
            +GQLG G+T     P  I    +   V  I+    + +    +       ++++ G   
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGK-RQVRNISCSYYHTIFACSDFGTLLPTLLFTCGRND 753

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKGY 238
              LG G+  +   P  +  F    I V  +  G  H + + ++      G +  +GK  
Sbjct: 754 FGQLGTGDIENRNIPTLVVKFPASAI-VQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGS 293
           CG LG G    + LP  L S +S+   Q   +  K       VL + G V+GFG   +G 
Sbjct: 813 CGQLGCGKSGFQILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRNDYGQ 872

Query: 294 LGFPDRGVSDKV---LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LGF +  ++D +    RP+++ SL    VS I+ G YHT+   + G L+ FG N   QLG
Sbjct: 873 LGF-ETNLNDGIPHSSRPQLIKSLEGKDVSTIACGSYHTIAACENGLLYVFGRNNHGQLG 931



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 29/308 (9%)

Query: 67  QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           +  +V++CG NS    GH DT  R  F    VE+L     K++ AG   +  LT  G V 
Sbjct: 578 EKAEVWSCGQNSYGELGHGDTVARNSFTR--VESLLQRSVKEIAAGNEHSVVLTEEGEVL 635

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           TCG N +GQ GH  T      K ++ L   ++ S+     G  + L ++ +G V + G  
Sbjct: 636 TCGYNDNGQCGHNSTKRASYFKKVSELSSAQISSIYSFN-GCEHSLLLSNDGRVATCGFN 694

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKG 237
               LG G  +  L P  I +F ++   V  +S    H +   S         ++T G+ 
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGKR--QVRNISCSYYHTIFACSDFGTLLPTLLFTCGRN 752

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLV-----DTGSVYGFGWMG 290
             G LG GD  ++ +P  +    +   VQ   C +     +       D G +  FG   
Sbjct: 753 DFGQLGTGDIENRNIPTLVVKFPASAIVQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ-----ISTGLYHTVVVTDRGRLFGFGDNE 345
            G LG    G     + P IL S R++  +Q     I  G YH +V+ + G ++GFG N+
Sbjct: 813 CGQLGCGKSGFQ---ILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRND 869

Query: 346 RAQLGHDT 353
             QLG +T
Sbjct: 870 YGQLGFET 877



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 123/306 (40%), Gaps = 33/306 (10%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV-- 65
           H+LL+SN   V +CG +  G LG G  T   +    IN      V  +S S  H  F   
Sbjct: 678 HSLLLSNDGRVATCGFNDYGQLGQG-NTNGLLVPNFINSFGKRQVRNISCSYYHTIFACS 736

Query: 66  ----LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLV------EALKGVPCKQVTAGLNF 114
               L    +FTCG N     G  D  NR I  P LV        ++ + C Q  + + F
Sbjct: 737 DFGTLLPTLLFTCGRNDFGQLGTGDIENRNI--PTLVVKFPASAIVQSLGCGQYHSIVIF 794

Query: 115 TGFLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAGPSYM 168
           T      +G +   G N  GQLG G +  +  P  I P     +  Q     I  G  + 
Sbjct: 795 TTRAKGDQGQICAFGKNDCGQLGCGKSGFQILP-VILPSFRSNTTAQHNPKFIKCGYYHN 853

Query: 169 LAVTGNGVVYSFGS------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           + +   G V+ FG       G    L  G  H   +P+ I++   +G  V  ++ G  H 
Sbjct: 854 IVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSS-RPQLIKSL--EGKDVSTIACGSYHT 910

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +A   +G +Y +G+   G LG  D  D   P P+ +  +    ++ A    T +L+    
Sbjct: 911 IAACENGLLYVFGRNNHGQLGTADNNDLATPFPVIAFINRHISRLSAGFYHTIILIGGAE 970

Query: 283 VYGFGW 288
           +   G+
Sbjct: 971 IKEIGY 976



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           D    V++ G+   G LGHGD + +     + SL      ++ A    + VL + G V  
Sbjct: 577 DEKAEVWSCGQNSYGELGHGDTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLT 636

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFGD 343
            G+   G  G      + +    + +  L +  +S I +  G  H++++++ GR+   G 
Sbjct: 637 CGYNDNGQCG---HNSTKRASYFKKVSELSSAQISSIYSFNGCEHSLLLSNDGRVATCGF 693

Query: 344 NERAQLGHDTLRGCLEPTEI 363
           N+  QLG     G L P  I
Sbjct: 694 NDYGQLGQGNTNGLLVPNFI 713



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 15/156 (9%)

Query: 6   GRYHTLLISNS-------SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ- 54
           G+YH+++I  +        + + G + CG LG G    Q +     +F S   A H  + 
Sbjct: 786 GQYHSIVIFTTRAKGDQGQICAFGKNDCGQLGCGKSGFQILPVILPSFRSNTTAQHNPKF 845

Query: 55  VSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +     H   + + G V+  G N      F     D      RP+L+++L+G     +  
Sbjct: 846 IKCGYYHNIVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSSRPQLIKSLEGKDVSTIAC 905

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           G   T      G ++  G N HGQLG  D  D  TP
Sbjct: 906 GSYHTIAACENGLLYVFGRNNHGQLGTADNNDLATP 941


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 21/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V +  +VFT G+  S   GH  T   +F+PRLVE+L     + +  G
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGH-GTGTNVFQPRLVESLSICNVELIACG 138

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 139 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSTVSCGTWHT 197

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVEV 255

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 256 IISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTT 315

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRL 338
           +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G +
Sbjct: 316 SGHIFTVGSSVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEV 371

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +     PT
Sbjct: 372 YTWGKGANGRLGHGDIADRKVPT 394



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 20/338 (5%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L+   S VF+ G    G LGHG   T       +   S  +V  ++  E H   V 
Sbjct: 88  KHAALVTRQSEVFTWGEECSGRLGHG-TGTNVFQPRLVESLSICNVELIACGEFHTCAVT 146

Query: 67  QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G ++T GD  +++   GH          R+   L G+P   V+ G   T  +T  G +
Sbjct: 147 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQL 206

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 175
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 207 YTFGDGTFGVLGHGNRASCSYPKEVESLKGL-RTISVSCGVWHTAAVVEVIISQSNASSG 265

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++++G G  + LGHG++  +L+P  I +      H  + + G    + L +SG+++T G
Sbjct: 266 KLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFH--KAACGHTLTIGLTTSGHIFTVG 323

Query: 236 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
               G LG+ +  D   P  +   L     V+V        VL + G VY +G    G L
Sbjct: 324 SSVYGQLGNPNN-DGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRL 382

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G  D  ++D+ + P ++++LR   V +++ G   T  +
Sbjct: 383 GHGD--IADRKV-PTLVEALRDRSVKRVACGSSFTAAI 417



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 19/287 (6%)

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 54  DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRL 110

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 193
           GHG   +   P+ +  L  + +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 111 GHGTGTNVFQPRLVESLS-ICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 170 VSHWIPKRV-SGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 228

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 304
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 229 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 286

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            L+P  + SL  ++  + + G   T+ +T  G +F  G +   QLG+
Sbjct: 287 -LKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGN 332



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 4/174 (2%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 61  GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNV 118

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 309
             P  + SL       +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 177

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 178 VSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 231


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 56
            + I  G     ++S +  V++CG    G LG G   T  V           +VV+   V 
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q G+V+ CG+ ++   G   T N P+  P  +  L+    K+V   +G      LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808

Query: 250 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           +LR  IL SL     S I+     ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4196

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4255

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGA 4314

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 4372

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4373 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +   R+  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220

Query: 359  EPTEI 363
             P EI
Sbjct: 3221 TPHEI 3225



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 117 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746

Query: 235 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4042 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + Q+A   + ML ++  G +Y++               E +P  ++         +    
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 335
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEP 360
           G +F +GD +  +LG+    G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 163/363 (44%), Gaps = 9/363 (2%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           ++ ++ + GS+  G LG+G  TT   +   ++ P+    V ++A + H+  +  +G V  
Sbjct: 52  ASDTILAWGSNFFGELGNG-TTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLA 110

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            GDNS    G   T      P  V    GV    V AG + +  LT  G V   G N+ G
Sbjct: 111 WGDNSHGQLGD-GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFG 169

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           QLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G      LG G  
Sbjct: 170 QLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDGTV 228

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            D   P A+         V  V+AG  H VAL S+G V  WG+ + G LG G  +D++ P
Sbjct: 229 VDRSTPVAVA--LPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTP 286

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
             +S      A  V A +  +  L   G V  +G   FG LG    G +     P  +  
Sbjct: 287 TVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLG---DGTTTTSSTPVSVTL 343

Query: 314 LRAHHVSQIST-GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
             A  ++ IS     H+V +T  G    +G N R QLG  T      P ++ +      T
Sbjct: 344 PAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVT 403

Query: 373 GLA 375
            +A
Sbjct: 404 AIA 406



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 11/227 (4%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H++ L S  +V + G +  G LG G    +      +  P +  V  V+A  NH
Sbjct: 196 VAAGATHSVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGGNH 254

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  +  +G V   G N     G       + R  P +V    GV    V AG   +  LT
Sbjct: 255 SVALTSAGTVLAWGRN---FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALT 311

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVY 178
             G V   G+NT GQLG G T    TP S+  L    ++  I+A  S + +A+T  G   
Sbjct: 312 TAGGVLAWGNNTFGQLGDGTTTTSSTPVSVT-LPAATTITAISARDSQHSVAMTSAGAAL 370

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S+G      LG G       P  +      G+ V  ++AGD+H +AL
Sbjct: 371 SWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  121 bits (304), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 27/344 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSAS 58
           +Q+  G+Y T  L  + S+ +CG    G LG G  ++ QC+    +   +   +     S
Sbjct: 371 IQLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGS 430

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNF 114
           ++H   + ++G V++ GD      GH +    +   +L + ++GV   Q    ++AG   
Sbjct: 431 DSHTLALTKNGVVYSWGDGEFGKLGHGN----VATQKLPKVIRGVFKNQIITFISAGSRH 486

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  +T  G ++T G   HG+LGHGD+  +  P  +     + +  Q+AAG S+ + ++ +
Sbjct: 487 SAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLV---RSIDAASQVAAGCSHTVVLSKD 543

Query: 175 GV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            + V++FG+G N  LGHG    E  P+ +     KGI + +++AG +  +AL  +G++Y 
Sbjct: 544 EMTVWTFGAGDNGKLGHGNTKMEYYPKIVDAL--KGIRIKKIAAGTQCSIALTWTGFIYV 601

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G C  +G  D +   LP+ + SL+    V +         L     VY +G    G 
Sbjct: 602 WGCGPCLGVGAADAV-HLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQ 660

Query: 294 LG----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    F    +  KVL    LD ++   + QISTG  H+   T
Sbjct: 661 CGLGHCFTPVSLPTKVL---ALDGIK---IEQISTGTSHSFAWT 698



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 14/248 (5%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G    G+LGHG+   +  PK I  + +   +  I+AG  +  A+T +G +
Sbjct: 437 LTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDL 496

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGK 236
           Y++G G +  LGHG+   +  P  +++         +V+AG  H V L      V+T+G 
Sbjct: 497 YTWGEGEHGRLGHGDSSIQRVPTLVRSIDAAS----QVAAGCSHTVVLSKDEMTVWTFGA 552

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGHG+   +  P+ + +LK     ++ A  + +  L  TG +Y   W     LG 
Sbjct: 553 GDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIY--VWGCGPCLGV 610

Query: 297 PDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
              G +D V L P+I++SLR  H+  IS G  H + ++    ++ +G+N   Q G   L 
Sbjct: 611 ---GAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCG---LG 664

Query: 356 GCLEPTEI 363
            C  P  +
Sbjct: 665 HCFTPVSL 672



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 10/235 (4%)

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +++   +  GSN+  QL  G+     TPK     +   + +Q+ AG     A+  +G ++
Sbjct: 334 SLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFK---NAIQLEAGQYCTFALFDDGSLH 390

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G GS+  LG G+   +     +  F +    +      D H +AL  +G VY+WG G 
Sbjct: 391 ACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGE 450

Query: 239 CGALGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGHG+   + LP+ +  + K+ +   + A  R +  +   G +Y +G    G LG  
Sbjct: 451 FGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHG 510

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGH 351
           D  +      P ++ S+ A   SQ++ G  HTVV++ D   ++ FG  +  +LGH
Sbjct: 511 DSSIQRV---PTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGH 560


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  +T  G ++T G  TH  G LG+G  +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTA 197

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G +   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQILSMGNTVYGQLGNPR---SDGKL-PCLVEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDIEDRKIPT 394



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 58
           +  G +HT  ++ +     +  G+   G+LG+G + +  +   RI+     H V  VS  
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIP-KRISGALEGHQVAYVSCG 192

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 117
             H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  
Sbjct: 193 TWHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAA 250

Query: 118 LT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           +              G + T G     +LGHGD   R  P  +A L +     +IA G S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFCRIACGHS 309

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             + +T +G + S G+     LG+     +L P  ++     G HVV+V+ G  HV  L 
Sbjct: 310 LTVGLTTSGQILSMGNTVYGQLGNPRSDGKL-PCLVEDI--MGEHVVQVACGSYHVAVLT 366

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 NKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR +++     + +  V+ G+ H  A+ ++G +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ +S +L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 37/347 (10%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 60  NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +G+++T GD   N        D +  I + R+  AL+G     V+ G   T 
Sbjct: 139 FHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGALEGHQVAYVSCGTWHTA 197

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 172
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 173 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
                   +G ++++G G    LGHG++   L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            +SG + + G    G LG+    D  LP  +  +     VQV        VL +   V+ 
Sbjct: 315 TTSGQILSMGNTVYGQLGN-PRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFT 373

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           +G    G LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 374 WGKGANGRLGHGD--IEDRKI-PTLVEALRDRGVRHIACGSNFTSAI 417



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 211
            + +V  +A G  +  AVT  G +Y++G G++    LG+G       P+ I +   +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRI-SGALEGHQ 185

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           V  VS G  H   + S G ++T+G G  G LGHG+    + P  + SL     + V    
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 272 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDYDFC 302

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           +I+ G   TV +T  G++   G+    QLG+    G L
Sbjct: 303 RIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKL 340



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFCRIA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 167
            G + T  LT  G + + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQILSMGNTVYGQLGN----PRSDGKLPCLVEDIMGEHVVQVACGSYH 361

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +  +T    V+++G G+N  LGHG+  D   P  ++  R +G+
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGV 404



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 313
            + SL       V   +  T  +   G +Y +G  G  ++G    G       P RI  +
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTAGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGA 180

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%)

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           SA D++    DSSG VY WG+  C           +    + D  LP+P   L+S L + 
Sbjct: 26  SAQDDY----DSSGDVYVWGEVICDNTVRVGPDTVIRSTGKADFLLPKP---LESKLVLD 78

Query: 267 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           V    C  K    V    G V+ +G    G LG    G  +  + PR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALV-TKNGEVFTWGEESGGRLGH---GSREDSVHPRLVESLAICNVDIV 134

Query: 323 STGLYHTVVVTDRGRLFGFGD 343
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTAGELYTWGD 155


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 8/255 (3%)

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           K    ++V+ G   + +L   G + +CG N +GQLG      R   + I+ LE   ++V 
Sbjct: 32  KKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRI--EQISSLE-AQTIVD 88

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGD 219
           ++ G ++ +A+   G +YS+G GS   LG G+       P+ I     + I  +++S G+
Sbjct: 89  VSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKI--IQISCGN 146

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            H VAL   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   +TF L 
Sbjct: 147 FHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS 206

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G+V+ +G    G LGF +        +P  +DSLR   V+ IS G  HT V+   G +
Sbjct: 207 MSGTVFAWGRNNAGQLGFKNDA-KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIV 265

Query: 339 FGFGDNERAQLGHDT 353
           + FGD+   QLG  +
Sbjct: 266 YTFGDDTYGQLGQQS 280



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 16/341 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGD 76
           ++  G +  G L    E  + V F   ++      VQ VS  E H+ ++L+ G + +CG 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     G +  N    R   + +L+      V+ G N +  +   G++++ G  + GQLG
Sbjct: 61  NPYGQLGRKGNNS---RIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLG 117

Query: 137 HGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-H 194
            G    +  TPK I  L     ++QI+ G  + +A+  +G V+S+G      LG G Q  
Sbjct: 118 TGKFSSKNFTPKRITGLLN-RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           ++  P+ +++   KGI +V+V+AG     AL  SG V+ WG+   G LG  ++  K   +
Sbjct: 177 NQATPQLVKSL--KGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234

Query: 255 P--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  + SL+      +   +  T VL   G VY FG   +G LG   +   ++   P+ ++
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG---QQSGNQTSVPQKIE 291

Query: 313 SLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHD 352
              +  VSQ++ G YHT++ V    R+  FG   + Q G+D
Sbjct: 292 EY-SRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGND 331



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 10/290 (3%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ G  H+L L+ + ++ SCG +  G LG     ++     +I+   A  +V VS   N
Sbjct: 38  KVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSR---IEQISSLEAQTIVDVSCGTN 94

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G +++ GD S    G    +   F P+ +  L      Q++ G   +  L  
Sbjct: 95  HSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE 154

Query: 121 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S   A++ +G V++
Sbjct: 155 DGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQTFALSMSGTVFA 213

Query: 180 FGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +G  +   LG      +   +P A+ + R  G  V  +S G+EH   L+  G VYT+G  
Sbjct: 214 WGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG--VAYISCGEEHTAVLNKDGIVYTFGDD 271

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G LG       ++P+ +      ++   C R      +     +  FG
Sbjct: 272 TYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCNRIVSFG 321



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 14/265 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H++ + +  +++S G    G LG G  +++  +  RI       ++Q+S   
Sbjct: 87  VDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGN 146

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 116
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + T 
Sbjct: 147 FHSVALAEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTF 203

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L++ G V   G N  GQLG  +   + T  P ++  L ++G V  I+ G  +   +  +
Sbjct: 204 ALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG-VAYISCGEEHTAVLNKD 262

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYT 233
           G+VY+FG  +   LG    +    P+ I+ + R+   V +V+ G  H ++ + +   + +
Sbjct: 263 GIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ---VSQVACGRYHTLLYVFTCNRIVS 319

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS 258
           +GKG     G+ +  D+     L S
Sbjct: 320 FGKGSQRQQGNDESSDQAEASQLPS 344


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 13/337 (3%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4070

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
            +T  G + T G+  +G+LG G+T ++  P+ +  LE +  + Q+A G ++ LAV+ +G +
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGL-HIGQVACGLNHTLAVSADGSL 4188

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 4189 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4246

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                 L  G   +   P+ +  L       +      T  L  +G VY +G    G LG 
Sbjct: 4247 DRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGL 4306

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4307 ---GHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 16/337 (4%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 58
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 117
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGTLQGKVVVCVSAGYRHSAA 525

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+SFG G N  LGHG+ +   +P+ ++    +G+   +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFTRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 698

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 699 -QGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 22/301 (7%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNF 114
            +  FV+ + G V  CG  S    G  D+N      +L      ++K V   + + G   
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--H 469

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT +
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTED 529

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYT 233
           G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V++
Sbjct: 530 GELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---WMG 290
           +G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    +G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GS            LRP++++ L A  +  IS G  H + ++    ++ +G+N   Q G
Sbjct: 646 CGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 351 H 351
            
Sbjct: 699 Q 699



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 12/303 (3%)

Query: 64   FVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LT 119
            FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G    Q+       G    LT
Sbjct: 4021 FVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVTQLVTSCGSDGHSMALT 4079

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ G  +   VT +G +++
Sbjct: 4080 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSCGFKHSAVVTADGKLFT 4138

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGY 238
            FG+G    LG G   ++  P  +     +G+H+ +V+ G  H +A+ + G  V+ +G G 
Sbjct: 4139 FGNGDYGRLGLGNTSNKKLPERVTAL--EGLHIGQVACGLNHTLAVSADGSLVWAFGDGD 4196

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LG G+   K+ P+ +  L      +V    + +  L   G VY FG      +G P+
Sbjct: 4197 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPE 4254

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
             G +    RP+++  L    +  I+ G  HT+ ++  G ++ +G N   QLG        
Sbjct: 4255 -GRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVR 4313

Query: 359  EPT 361
            EPT
Sbjct: 4314 EPT 4316



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 218
            Q+  G +    +  NG V + G GS   LG G   D      I   +   +  +  S G 
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4071

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D H +AL  SG V++WG G  G LGHG+   +  P  + +L+    VQ+    + + V+ 
Sbjct: 4072 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4131

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
              G ++ FG   +G LG  +   S+K L P  + +L   H+ Q++ GL HT+ V+  G L
Sbjct: 4132 ADGKLFTFGNGDYGRLGLGN--TSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSL 4188

Query: 339  -FGFGDNERAQLG 350
             + FGD +  +LG
Sbjct: 4189 VWAFGDGDYGKLG 4201



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+    F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPCFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++  +L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 3980 VFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4036

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4037 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4093

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4094 KLGHGNSDRQRRPRQIEALQGEE 4116


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 159/351 (45%), Gaps = 22/351 (6%)

Query: 33  PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 92
           P TT  +    +       V Q+++   H A V + G+VFT G+ S    GH   ++   
Sbjct: 247 PSTTDVLVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGH-GIDKDFG 305

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI- 149
           RP+LVE L     + V  G N T  ++I   + + G   +  G LGHG  +    PK I 
Sbjct: 306 RPQLVEFLAVTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRIN 365

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
            PLE +  V+ IA G  +    T NG +++FG G+   LGHG +     P+ +Q     G
Sbjct: 366 GPLEGL-QVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLL--SG 422

Query: 210 IHVVRVSAGDEHVVALD----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           +  + V+ G  H  A+           SS  ++TWG G    LGHG++     P  +S+L
Sbjct: 423 LKTITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTL 482

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             +   Q+      T  L  +G ++  G   FG LG     +SD  +   + D+L    V
Sbjct: 483 IEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLG---NSLSDGKIPILVQDALVGEFV 539

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            +IS G +H   +T R  L+ +G     +LGH  +     PT   ++ ++E
Sbjct: 540 EEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPT--LVEALKE 588



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 142/340 (41%), Gaps = 26/340 (7%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 57
           QI +G  H  L++    VF+ G    G LGHG +      F R   + F +  +V  V+ 
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDK----DFGRPQLVEFLAVTNVESVAC 323

Query: 58  SENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
            ENH   V  S ++F+ GD        GH          R+   L+G+    +  G   +
Sbjct: 324 GENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHS 383

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 171
              T  G + T G  T G LGHG+      PK +  L  + ++  +A G  +  A+    
Sbjct: 384 ALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTIT-VACGVWHTAAIVEVT 442

Query: 172 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +G+ V    ++++G G  + LGHG +   LQP  + T      H  +++ G    +AL
Sbjct: 443 FQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIAL 500

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            +SG+++T G    G LG+     K       +L      ++         L     +Y 
Sbjct: 501 TTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSELYT 560

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           +G    G LG    G  D    P ++++L+  HV  IS G
Sbjct: 561 WGKGANGRLG---HGDIDDRKSPTLVEALKERHVKNISCG 597



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 18/230 (7%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + I  G +H+ L  SN  +F+ G    GVLGHG    + V++ + +   S    + V+  
Sbjct: 374 ISIACGTWHSALATSNGKLFTFGDGTFGVLGHG--NRESVAYPKEVQLLSGLKTITVACG 431

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD   +  GH +      +P  V  L      Q+
Sbjct: 432 VWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGN-KETYLQPTCVSTLIEYNFHQI 490

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   T  LT  GH+ T G    GQLG+  + D   P  +        V +I+ G  ++
Sbjct: 491 ACGHTMTIALTTSGHLFTMGGTEFGQLGNSLS-DGKIPILVQDALVGEFVEEISCGAHHV 549

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            A+T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G
Sbjct: 550 AALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKER--HVKNISCG 597



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 13/160 (8%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSASENHAAFVLQS 68
           +S+  +F+ G      LGHG + T     CVS T I +    +  Q++        +  S
Sbjct: 449 VSSRKLFTWGDGDKYRLGHGNKETYLQPTCVS-TLIEY----NFHQIACGHTMTIALTTS 503

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           G +FT G       G+  ++  I  P LV+ AL G   ++++ G +    LT R  ++T 
Sbjct: 504 GHLFTMGGTEFGQLGNSLSDGKI--PILVQDALVGEFVEEISCGAHHVAALTSRSELYTW 561

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           G   +G+LGHGD  DR +P  +  L+E   V  I+ G S+
Sbjct: 562 GKGANGRLGHGDIDDRKSPTLVEALKE-RHVKNISCGSSF 600


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 166/366 (45%), Gaps = 20/366 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            +++ GR HTL++ ++ +V + G +  G LG G  T +      ++ P    V  V++   
Sbjct: 763  RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT---GPVSVPGVPCVRSVASGIQ 819

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            H+  +   G V+  G N+    G   T  P   P LVE L+GV    + AG + +  L  
Sbjct: 820  HSLALACDGTVWAWGANARGQLGD-GTTTPRVTPGLVEGLRGVVA--LAAGGDASVALRA 876

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V + G N  GQLG G   DR  P   A +E + + V +A G ++ LAV  +G ++++
Sbjct: 877  DGSVWSWGGNASGQLGDGTLTDRALP---AHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G+  +  LG G     L P  ++   R    V  V+AG    VA+   G  + WG    G
Sbjct: 934  GANGSGQLGDGGTAPSLTPVRVKGLER----VASVAAGRAFSVAVRDDGTAWAWGTNPSG 989

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LG G    +++P  ++SLK   A+   A       L   G+V+ +G    G LG  D  
Sbjct: 990  QLGDGTNHARSVPNQVTSLKGIRAMSAGA--HHVVALSADGTVWTWGDNTLGQLG--DGS 1045

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             S   + PR +  LR   V  ++ G   TV V   G    +G NE  QLG       L P
Sbjct: 1046 SSPTGMWPRQVPELRG--VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTP 1103

Query: 361  TEIFIQ 366
              + I+
Sbjct: 1104 MAVKIE 1109



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 164/355 (46%), Gaps = 33/355 (9%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG +H+L  + + SV++ G +  G LG G    +  +   +       V  V+++ +H
Sbjct: 414 MATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAA---VRVEGLGGVRSVASAAHH 470

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +  V   G V+  G N++   G     D  RP+  P L           V AG +    L
Sbjct: 471 SLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS------VTAVAAGGSHVLAL 524

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N  GQLG G T+DR TP  ++ L   G+VV +AAG  + +A+  +G V+
Sbjct: 525 RSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL---GAVVAVAAGSYFSMALQSDGTVW 581

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G G    LG G     L P  ++       ++ RV+AG  H +A+   G V+ WG   
Sbjct: 582 TWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWAWGDNG 637

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   D+  P  +  L+   A  V   +  +  L   G+V  +G+ G+G LG  D
Sbjct: 638 EGQLGDGSWADRFRPVQVPGLQGITA--VSGGRSHSMALQGDGTVRAWGYNGYGQLG--D 693

Query: 299 RGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             ++ +V RP +   L  ++A H S +     H + +   G L G+G N   QLG
Sbjct: 694 GTLTSRV-RPALIPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLG 742



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 159/353 (45%), Gaps = 22/353 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L+   +VF+ G++  G LG G  T +    T    P    V  V     HA  + + G +
Sbjct: 324 LLDTGAVFAWGANGSGQLGDGDTTDRA---TPGPVPGLNAVASVVGGAQHALVLRKDGTL 380

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           +  G   S   GH  + R +  P  V  L GV     T   +    L   G V   G NT
Sbjct: 381 WAWGGGLSGQLGHGGSERHVV-PAPVMRLAGV-TSMATGSFHSLAALG-DGSVWAWGRNT 437

Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           +GQLG G T +R    +   +E +G V  +A+   + LAV  +G V+++G  +   LG G
Sbjct: 438 YGQLGDGSTAER---HAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG 494

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
              D  +P A+         V  V+AG  HV+AL S G V+ WG    G LG G  +D+ 
Sbjct: 495 TTLDRARPVAVPGL----TSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRL 550

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRI 310
            P  +S L +   V V A    +  L   G+V+ +G  GF G LG    G   + L P  
Sbjct: 551 TPVRVSGLGA--VVAVAAGSYFSMALQSDGTVWTWG-EGFEGQLG---DGGGVQRLSPVR 604

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           ++ L   ++++++ G  H + V   G ++ +GDN   QLG  +      P ++
Sbjct: 605 VEGL--ANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQV 655



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 163/367 (44%), Gaps = 21/367 (5%)

Query: 1    MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + +  G  H L +  + ++++ G++  G LG G       S T +       V  V+A  
Sbjct: 912  VAVAVGETHALAVGEDGALWAWGANGSGQLGDG---GTAPSLTPVRVKGLERVASVAAGR 968

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  V   G  +  G N S   G   TN     P  V +LKG+  + ++AG +    L+
Sbjct: 969  AFSVAVRDDGTAWAWGTNPSGQLGD-GTNHARSVPNQVTSLKGI--RAMSAGAHHVVALS 1025

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNGVV 177
              G V T G NT GQLG G +    +P  + P  + E+  V  +AAG  + +AV  +G  
Sbjct: 1026 ADGTVWTWGDNTLGQLGDGSS----SPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTA 1081

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 236
             ++GS     LG G+   +L P A++    K    VR V A  +H V   S G V TWG 
Sbjct: 1082 RAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGD 1141

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               G LG G    + +P  +  L S +AV   A    +  L+  G+V+ +G  GFG LG 
Sbjct: 1142 NTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWH--SLALLSDGTVWAWGANGFGQLG- 1198

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               G S    RP  +  L    V  I +G YH + V   G ++ +G N   QLG  T   
Sbjct: 1199 --DGTSTPRTRPVQVAGL--GDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAES 1254

Query: 357  CLEPTEI 363
               PT +
Sbjct: 1255 RSLPTRV 1261



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 166/353 (47%), Gaps = 22/353 (6%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M+I  G  H+L +S    V++ G +  G LG    + Q ++  R+   +  ++V V + +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRL--AALENIVSVVSGD 118

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +   G V+T G NSS   G    T+R    P  V  L  V    V AG   +  L
Sbjct: 119 AHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT--PMRVAGLDSVVA--VAAGDFHSLAL 174

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G+N HGQLG G T    TP+ +  L     VV +AAG  + LAV  +G V 
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN---GVVALAAGFDFTLAVLEDGTVR 231

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++GS  +  LG G     L P  ++     GI  VR  AG  H +AL   G V+TWG   
Sbjct: 232 AWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVR--AGTYHALALGKDGGVWTWGSNA 287

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   D+ +P  +  L+   A  V +    +  L+DTG+V+ +G  G G LG  D
Sbjct: 288 SGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGSGQLGDGD 345

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              +D+   P  +  L A  V+ +  G  H +V+   G L+ +G     QLGH
Sbjct: 346 --TTDRAT-PGPVPGLNA--VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGH 393



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 151/347 (43%), Gaps = 22/347 (6%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            G++  + +S+ +V + G +  G LG G  T + V  T       A VV VS+   H+  +
Sbjct: 1124 GQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGL---ASVVAVSSGAWHSLAL 1180

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
            L  G V+  G N     G   T+ P  RP  V  L  V    + +G      +   G V 
Sbjct: 1181 LSDGTVWAWGANGFGQLGD-GTSTPRTRPVQVAGLGDVVA--IGSGGYHALAVCSDGSVW 1237

Query: 126  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            T G N  GQLG G    R  P  +  LE    VV +A G  Y LA+  +G + ++G+ ++
Sbjct: 1238 TWGYNAFGQLGDGTAESRSLPTRVEGLE---GVVAVAGGDHYSLALHSDGTLSAWGNNAS 1294

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
              LG G        R  +   +    VV V AG  H VAL   G V+TWG    G LG G
Sbjct: 1295 GQLGDGTG----TTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDG 1350

Query: 246  DEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
                +   +P P+ +L S  AV   AR   TF +   G+V+ +G    G LG  D     
Sbjct: 1351 ASGTRMRLVPRPVPNLSSVSAVGAGARH--TFAVALKGTVWTWGRNSHGQLGLGDNTNRT 1408

Query: 304  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + LR R L       V+ +S G   ++ +   G +  +G +    LG
Sbjct: 1409 EPLRVRELSD-----VTVVSGGADFSLAMKRDGTVLSWGSSLYGSLG 1450



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 158/368 (42%), Gaps = 19/368 (5%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQ-VSASENHAAF 64
            ++   ++ + +  + GS+  G LG G    Q      +I  P     V+ V A   HA  
Sbjct: 1070 QFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVV 1129

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
             +  G V T GDN+    G   T R    P  V  L  V    V++G   +  L   G V
Sbjct: 1130 QMSDGTVQTWGDNTFGQLGDGTTTRRAV-PLTVYGLASVVA--VSSGAWHSLALLSDGTV 1186

Query: 125  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
               G+N  GQLG G +  R  P  +A L   G VV I +G  + LAV  +G V+++G  +
Sbjct: 1187 WAWGANGFGQLGDGTSTPRTRPVQVAGL---GDVVAIGSGGYHALAVCSDGSVWTWGYNA 1243

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
               LG G       P  ++        VV V+ GD + +AL S G +  WG    G LG 
Sbjct: 1244 FGQLGDGTAESRSLPTRVEGLE----GVVAVAGGDHYSLALHSDGTLSAWGNNASGQLG- 1298

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
             D    T    ++       V V A    T  L   G+V+ +G   FG LG    G   +
Sbjct: 1299 -DGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMR 1357

Query: 305  VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            ++ PR + +L +  VS +  G  HT  V  +G ++ +G N   QLG        EP  + 
Sbjct: 1358 LV-PRPVPNLSS--VSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEP--LR 1412

Query: 365  IQEMEEDT 372
            ++E+ + T
Sbjct: 1413 VRELSDVT 1420



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 157/367 (42%), Gaps = 27/367 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G Y ++ L S+ +V++ G    G LG G    Q +S  R+     A++ +V+A  
Sbjct: 562 VAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDG-GGVQRLSPVRVE--GLANITRVAAGS 618

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            HA  V   G V+  GDN     G     +R  FRP  V  L+G+    V+ G + +  L
Sbjct: 619 AHALAVRGDGTVWAWGDNGEGQLGDGSWADR--FRPVQVPGLQGITA--VSGGRSHSMAL 674

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV 176
              G V   G N +GQLG G    R  P  I  L  +      A  PS++  LA+  +G 
Sbjct: 675 QGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGI-----QALHPSHLHVLALHADGT 729

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +  +G      LG G       P  ++   R    V R+S G  H + + + G V  WG+
Sbjct: 730 LRGWGYNRFGQLGLGAAGWSAVPVQVRGIGR----VDRLSVGRAHTLMVRADGTVMAWGE 785

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G    +T   P+S         V +  + +  L   G+V+ +G    G LG 
Sbjct: 786 NGSGQLGDGTSTHRT--GPVSVPGVPCVRSVASGIQHSLALACDGTVWAWGANARGQLG- 842

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G +   + P +++ LR   V  ++ G   +V +   G ++ +G N   QLG  TL  
Sbjct: 843 --DGTTTPRVTPGLVEGLRG--VVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTD 898

Query: 357 CLEPTEI 363
              P  +
Sbjct: 899 RALPAHV 905



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 25/304 (8%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
            + +++G +H+L L+S+ +V++ G++  G LG G  T +    TR +       VV + + 
Sbjct: 1168 VAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPR----TRPVQVAGLGDVVAIGSG 1223

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              HA  V   G V+T G N+    G   T      P  VE L+GV    V  G +++  L
Sbjct: 1224 GYHALAVCSDGSVWTWGYNAFGQLGD-GTAESRSLPTRVEGLEGVVA--VAGGDHYSLAL 1280

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               G +   G+N  GQLG G    R    S   ++ V  VV + AG ++ +A+ G+G V+
Sbjct: 1281 HSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGVVDVRAGATHTVALRGDGTVW 1337

Query: 179  SFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            ++G  +   LG G     ++  PR +         V  V AG  H  A+   G V+TWG+
Sbjct: 1338 TWGDNAFGQLGDGASGTRMRLVPRPVPNLS----SVSAVGAGARHTFAVALKGTVWTWGR 1393

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGWMGF 291
               G LG GD  ++T P  +  L     V        A KR   VL    S+YG   +G 
Sbjct: 1394 NSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGS--LGL 1451

Query: 292  GSLG 295
            G+ G
Sbjct: 1452 GATG 1455



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQI 161
            P  ++ AG   + +L+  G V   G N  GQLG  +T L    P  +A LE + SVV  
Sbjct: 58  APPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALENIVSVV-- 115

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDE 220
            +G ++ LA+  +G V+++G  S+  LG G   D   P      R  G+  VV V+AGD 
Sbjct: 116 -SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATP-----MRVAGLDSVVAVAAGDF 169

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H +AL   G V+ WG  + G LG G       PE +  L     V + A    T  +++ 
Sbjct: 170 HSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLED 227

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G+V  +G  G G LG    G S + L P  +  L    ++++  G YH + +   G ++ 
Sbjct: 228 GTVRAWGSNGSGQLG---DGTSTQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWT 282

Query: 341 FGDNERAQLGHDTLRGCLEPTEI-------FIQEMEEDT 372
           +G N   QLG  T      P ++        +  M+ D+
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 5/248 (2%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           Q  +G + +  L   G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKE 85

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LAV   G V+++G+ S   LG GE +     P+ I+T    GI +++V+ G  H VAL
Sbjct: 86  HSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL--AGIKIIQVACGHYHSVAL 143

Query: 226 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
              G V++WG    G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 144 SEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSF 203

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G+G    G L         +  +P  + +L+   V  IS G  HT V+T  G++F FGDN
Sbjct: 204 GWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDN 263

Query: 345 ERAQLGHD 352
              QLGHD
Sbjct: 264 SYGQLGHD 271



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 22/301 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCG 83

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 230 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 287 GWMGFGSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           G   +G LG       RG       P++++ +    VSQI  G  HT+  +   G++  F
Sbjct: 261 GDNSYGQLGHDPTAEKRG-------PQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 17/296 (5%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSC 82

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 177 VYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             SFG GSN        G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +T+G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4045 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4103

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4104 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4162

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4163 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4221

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4222 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4281

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4282 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4338

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4339 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4385



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4192

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4253 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4310

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4311 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4370

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4371 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3019 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3076

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3134

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
              ++ +G ++T G   +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3135 AAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAG-RRVVQVACGSRDAQTLALTE 3193

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3194 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3251

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3312 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3030 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3087

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3088 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3144

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3145 TWGLGEYGRLGHGDNVTQLKPKLVVAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3261

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3262 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3313



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4137 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4192

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4251

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4252 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGA 4310

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 4311 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 4368

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4369 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 634 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 692

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 693 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 752

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +G  +  LQP  +++  R    V RV AG +  +AL S G +Y+WGK  C  LGH   ++
Sbjct: 753 NGNCNGSLQPILVESLPR----VQRVFAGSQFSLALSSEGQLYSWGKATC--LGH-QLVE 805

Query: 250 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 806 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 864

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           +LR  IL SL     S I+     ++V T
Sbjct: 865 LLRTPILVSLPTFPASGIACTSAQSLVWT 893



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 117 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 625 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 683

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 743

Query: 235 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 744 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSLALSSEGQLYSWGKATC 798

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 799 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 855



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3040

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNV 3160

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3161 TQ---LKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3217

Query: 359  EPTEI 363
             P EI
Sbjct: 3218 TPHEI 3222



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4038 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4089

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4090 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4149

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4150 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4209

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4210 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4266

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4267 YGKLGRGGSDGCKLPYKI 4284



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + Q+A   + ML ++  G +Y++               E +P  ++    +    +    
Sbjct: 571 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHEVFISIAGHC 620

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 621 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 335
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 681 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 737

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEP 360
           G +F +GD +  +LG+    G L+P
Sbjct: 738 GLVFAWGDGDYGKLGNGNCNGSLQP 762



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4035 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4094

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4095 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4151

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4152 EVYAWGEGEDGKLGH 4166


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 6/274 (2%)

Query: 86  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           +TNRP    R      G   +Q  +G   +  L   G +H+ G N+HGQLG  D   +  
Sbjct: 6   NTNRPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQ 65

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQT 204
           PK I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE ++  L PR I+T
Sbjct: 66  PKRIPALETL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKT 124

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHL 263
                I +++VS G  H +AL   G ++TWG    G LG G E   +  P+ +  L    
Sbjct: 125 L--TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIP 182

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQI 322
             QV A    +F L  +G+ +G+G    G L    + V   +  +P  +D+L    V  I
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYI 242

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
           S G  HT V+T  G++F FG N   QLG+    G
Sbjct: 243 SCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAG 276



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 17/301 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A + Q ++ E H+  +L +G++ + GDNS    G RD  R   +P+ + AL+ +    V+
Sbjct: 23  AELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQE-QPKRIPALETLRVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +    P+ I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI-KIIQVSCGHHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +G ++++GS S+  LG G++   +  P+ +Q     GI + +V+AG  H  AL  
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFL--DGIPLTQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGALGHGDE----IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           SG  + WG    G L    +    +  + P  + +L++   V +      T VL  TG V
Sbjct: 199 SGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKV 258

Query: 284 YGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           + FG   +G LG+ P  G       P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 259 FTFGGNSYGQLGYSPTAGKEG----PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 313

Query: 342 G 342
           G
Sbjct: 314 G 314



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 10/292 (3%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q  +G  H+LL+ SN  + S G +  G LG      Q     RI       V  VS  + 
Sbjct: 27  QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQ-EQPKRIPALETLRVDLVSCGKE 85

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  V   G+VF  G  S    G  + N     PR ++ L  +   QV+ G + +  L+ 
Sbjct: 86  HSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE 145

Query: 121 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G + T GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G  + 
Sbjct: 146 DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGI-PLTQVAAGGAHSFALSLSGASFG 204

Query: 180 FGSGSNFCLGHGEQHDEL----QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           +GS S   L   +++  +    +P ++      G  VV +S G EH   L  +G V+T+G
Sbjct: 205 WGSNSEGQLALRKKNVPVVQSSKPCSVDALENLG--VVYISCGYEHTAVLTQTGKVFTFG 262

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
               G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 20/345 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4075

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------VVQIAAGPSYML 169
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G       +  +A G ++ L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 170  AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKD 4252

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG +Y +G 
Sbjct: 4253 GQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGS 4312

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 NSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 20/332 (6%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4010 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4067

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4068 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4126

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 214
             G  +   VT +G +++FG+G    LG G   ++  P  +           R K I +  
Sbjct: 4127 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSI-ICS 4185

Query: 215  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4186 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4245

Query: 274  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T
Sbjct: 4246 SVALTKDGQVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALT 4302

Query: 334  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
              G ++ +G N   QLG        EPT + +
Sbjct: 4303 STGDIYAWGSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      QV A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQVSA 725



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 20/239 (8%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3985 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4039

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4040 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4099

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4100 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4157

Query: 302  SDKVLRPRILDSLRAHHVSQ---------ISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  + + Q         ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4158 SNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3985 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4041

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4042 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4098

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4099 KLGHGNSDRQRRPRQIEALQGEE 4121



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           S   CG  ++  PI +P+ V  L G+  +QV+AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAG 726


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 143/303 (47%), Gaps = 21/303 (6%)

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--G 133
           D  +  CG R       + +L++AL  +  + V  G   T  +T+ G ++T G  T   G
Sbjct: 208 DVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFG 267

Query: 134 QLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            LGHG+ +    PK +  PLE +  V  I+ GP +   VT  G +++FG GS   LGHG+
Sbjct: 268 LLGHGNDVSHWVPKHVNGPLEGI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGD 326

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DSSGYVYTWGKGYCG 240
           +     PR +++   KG+  VR + G  H  A+             SSG ++TWG G  G
Sbjct: 327 RESISVPREVESL--KGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKG 384

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LGHGD+  K +P  +++L      QV      T  L  +G VY  G   +G LG     
Sbjct: 385 RLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NA 441

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D +L  R+   L  + V +IS G YH  V+T R  ++ +G     +LGH        P
Sbjct: 442 QADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTP 501

Query: 361 TEI 363
           T +
Sbjct: 502 TLV 504



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 298

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVE-PNFCQVACGHC 416

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 417 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLYKNF-VEEISCGAYHVAVLT 474

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 475 SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALK 508



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 295 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 352

Query: 61  HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H A V++            SG++FT GD      GH D   P   P  V AL      QV
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGD-KEPKLVPTCVAALVEPNFCQV 411

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 412 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGKLYKNFVEEISCGAYHV 470

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 471 AVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNV 515



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 56
           Q+  G   T+ ++ S  V++ GS++ G LG+    G    +       NF     V ++S
Sbjct: 410 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-----VEEIS 464

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               H A +    +V+T G  ++   GH DT      P LVEALK    + V  G+NFT 
Sbjct: 465 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGINFTA 523

Query: 117 FLTIRGHV 124
            + I   V
Sbjct: 524 AICIHKWV 531


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 847  VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 905

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 906  AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 964

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 965  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1022

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1082

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 1083 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 833  PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 892

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 893  LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 951

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 952  DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1011

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1068

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1069 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1097



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 812

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 872

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 873 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 932

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 933 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 989

Query: 357 CLEPTEI 363
           C  P +I
Sbjct: 990 CKVPMKI 996



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 849  VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 907

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 908  SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 966

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 967  DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 1025

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 1026 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1083

Query: 240  GALGHG 245
            G LG G
Sbjct: 1084 GQLGDG 1089



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
           +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ + 
Sbjct: 5   KPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 62

Query: 258 SLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
            L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L 
Sbjct: 63  VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLN 119

Query: 316 AHHVSQISTGLYHTVVVTDRG-----RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
              V QI  G   ++ +T  G     +++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 176



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PRL+EALK    + +  G + +  LT  G ++T G   +G+LGHGD   +  PK +  L
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 153 EEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G       P+ I+  R  G
Sbjct: 65  --LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNG 120

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
             V ++  G +  +AL  SG V+TW     G   HG +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ 158



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 7/192 (3%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P+ I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++  
Sbjct: 6   PRLIEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 206 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
              G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L    
Sbjct: 65  L--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSL--GFPDRGVSDKVLRPRILDSLRAHHVSQ 321
             Q+    + +  L  +G V+ +    +G    G    G +    +P ++  L    +++
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 322 ISTGLYHTVVVT 333
           ++ G  H+V  T
Sbjct: 183 VACGSSHSVAWT 194



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 957  SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1015

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1016 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1074

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1075 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1120



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 747 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 806

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 807 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G+ E  +LGH     C  P  I
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVI 890



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 11/178 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 78

Query: 62  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 137

Query: 120 IRG-----HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             G      V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 138 KSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 194


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 16/323 (4%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 71
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3112 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3169

Query: 72   FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3170 FSWGEGEDGKLGH--GNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3227

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 188
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3228 EYGRLGHGDNATQLKPKLVAALSG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3286

Query: 189  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3287 GRGGSEGSSTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3344

Query: 249  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
                P+P++ L+ H  + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 3345 HVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 3401

Query: 309  RILDSLRAHHVSQISTGLYHTVV 331
             ++  L A  V++++ G  H++ 
Sbjct: 3402 ALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4214 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4272

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4273 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4332 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4390

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4391 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4450

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  + V RP+ + +
Sbjct: 4451 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVEHVRRPKKVAA 4507

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4508 LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRP 4554



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4361

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4479

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G   
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4539

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4540 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 17/293 (5%)

Query: 65   VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3109 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3166

Query: 122  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3167 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3223

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 237
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3224 WGLGEYGRLGHGDNATQLKPKLVAAL--SGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3281

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LG G     + P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3282 DFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3339

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              G    V +P+ +  LR H V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3340 -HGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3391



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3157 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3214

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 122
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDG 3273

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3274 AVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3332

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLR--GHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3390

Query: 243  GHGDEIDKTLP 253
            G G+      P
Sbjct: 3391 GSGNTFVNKKP 3401



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4306 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4361

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4420

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4479

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+TWG 
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFTWGD 4537

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4538 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           + ++ G     +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 666 NAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITLGGNLYTWGR 723

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G+   LGHG   D+  P  +   +   +  V + +GD H + L S G V+ WG G  G L
Sbjct: 724 GTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKL 783

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G+G      LP+ +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 784 GNGSCNSSLLPQLIDCLPR--VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQ 841

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              + PR++  L+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 842 GCSV-PRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQICPASV--CSEP 896



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V   G N   QLG   G  +  PT    +P       + IA G   +  V+ +G VY+ G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPT---FSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G 
Sbjct: 3120 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3180 LGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT 3239

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G   
Sbjct: 3240 Q---LKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSST 3296

Query: 360  PTEI 363
            P EI
Sbjct: 3297 PHEI 3300



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4207 ALSWGGASTIYGW----GHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4258

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4259 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4318

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4378

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4379 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4435

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4436 YGKLGRGGSDGCKLPYKI 4453



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 15/250 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P  +E+L  +  K V  G +++  +T+ G+++T G  T+G+LGHG + D+  P  +  L+
Sbjct: 689 PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALK 747

Query: 154 EVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
           +   V V + +G ++ L +T  G+V+++G G    LG+G  +  L P+ I    R    V
Sbjct: 748 DHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR----V 803

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-----TLPEPLSSLKSHLAVQV 267
            RV AG +  +AL   G +Y+WGK  C  LGH   +++     ++P  ++ L+    V V
Sbjct: 804 QRVFAGAQFSLALSCEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITGLQHKRIVDV 860

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                    L  +G ++G+G      +  P    S+ +LR  I  +L     S I+    
Sbjct: 861 AVGVAHCLALSSSGEIFGWGRNDNQQI-CPASVCSEPLLRQPIQVTLPTLPASGIACTAA 919

Query: 328 HTVVVTDRGR 337
            +++ T   R
Sbjct: 920 QSLIWTQSTR 929



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 66
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G VF  GD      G+   N  +  P+L++ L  V  ++V AG  F+  L+  G +++
Sbjct: 768 SEGLVFAWGDGDYGKLGNGSCNSSLL-PQLIDCLPRV--QRVFAGAQFSLALSCEGQLYS 824

Query: 127 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ +G ++ +G
Sbjct: 825 WGKASC--LGH-QLVERNVQGCSVPRLITGLQH-KRIVDVAVGVAHCLALSSSGEIFGWG 880

Query: 182 SGSN 185
              N
Sbjct: 881 RNDN 884



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4204 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4263

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4264 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4320

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4321 EVYAWGEGEDGKLGH 4335


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 229

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 230 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 288

Query: 137 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 289 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 347

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 243
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 348 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 300
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 406 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 465

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 466 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 509



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 312 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 370

Query: 112 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 371 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 429

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 219
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 430 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 485

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 486 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 526



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 158 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 217

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 218 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 276

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 286
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 396

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 397 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 453

Query: 347 AQLGHDTL 354
            QLG   L
Sbjct: 454 GQLGSHRL 461



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 371

Query: 60  NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 372 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 430

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 489

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 490 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 543



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 138 GDTL-----DRPTPKSIAPLEEVGSVVQI------AAGPSYMLAVTGNGVVYSFGSGSNF 186
           GD L     DR T K+   L  + +  QI      + G  +   VT  G V+S+G     
Sbjct: 174 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 233

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 234 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 291

Query: 247 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 292 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 348

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 353
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 349 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 408

Query: 354 LRGCLEPT 361
               L PT
Sbjct: 409 KESKLVPT 416



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 203 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 262

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 328
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 263 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 321

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T +++  G+LF +GD     LGH        P E+
Sbjct: 322 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 356


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 235 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 294

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 295 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 137 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 354 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 412

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 243
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 413 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 470

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 300
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 471 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 530

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 531 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 574



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 377 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 435

Query: 112 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 436 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 494

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 219
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 495 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 550

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 551 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 591



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 223 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 282

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 283 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 341

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 342 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 286
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 461

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 462 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 518

Query: 347 AQLGHDTL 354
            QLG   L
Sbjct: 519 GQLGSHRL 526



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 436

Query: 60  NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 437 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 495

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 554

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 555 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 608



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 138 GDTL-----DRPTPKSIAPLEEVGSVVQI------AAGPSYMLAVTGNGVVYSFGSGSNF 186
           GD L     DR T K+   L  + +  QI      + G  +   VT  G V+S+G     
Sbjct: 239 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 298

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 299 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 356

Query: 247 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 357 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 413

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 353
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 414 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 473

Query: 354 LRGCLEPT 361
               L PT
Sbjct: 474 KESKLVPT 481



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 268 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 327

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 328
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 328 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 386

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T +++  G+LF +GD     LGH        P E+
Sbjct: 387 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 421


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+S    H A   + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDEDISRPKLVESLAVSNVEYIACG 314

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++  G  ++  G LGHG       PK ++ PLE +  V+ +A G  + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGL-QVLSVACGSWHS 373

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
                +G V++FG G+   LGHG + +   P+ +++    G   ++V+ G  H  A+   
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESL--SGFRTMKVACGVWHSAAIVET 431

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  ++TWG G    LGHGD+  + +P  + +L  +   QV      T  L 
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALA 491

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G   +G LG P    +D     ++ D L +  V +IS G YH  V+T R  +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPK---ADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEV 548

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +    +PT
Sbjct: 549 YTWGMGANGRLGHGGIEDKKKPT 571



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 17/290 (5%)

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           +S+  C   D    +  P+ +E+   +  +Q++ G       T +G V T G    G+LG
Sbjct: 232 SSNLVCSKTD----VLIPKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLG 287

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 194
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G GS     LGHG   
Sbjct: 288 HGTDEDISRPKLVESLA-VSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGA 346

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P+ + +   +G+ V+ V+ G  H     SSG V+T+G G  GALGHG+  +   P+
Sbjct: 347 SHWLPKRV-SGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAYPK 405

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 306
            + SL     ++V      +  +V+T S  G        F W G G       G  +  L
Sbjct: 406 EVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTW-GDGDKNRLGHGDKEARL 464

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            P ++ +L  ++  Q++ G   T+ +   G +F  G +   QLG+    G
Sbjct: 465 VPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADG 514



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 149/346 (43%), Gaps = 22/346 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
            QI+ G  H  L +    VF+ G  L G LGHG  T + +S  + +   + ++V  ++  
Sbjct: 257 QQISCGSRHIALTTRQGEVFTWGEELGGRLGHG--TDEDISRPKLVESLAVSNVEYIACG 314

Query: 59  ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           E H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSA 374

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 171
                G V T G  T G LGHG+  +   PK +  L      +++A G  +  A+     
Sbjct: 375 LAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGF-RTMKVACGVWHSAAIVETTS 433

Query: 172 -TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            TG  +V    +++G G    LGHG++   L P  +Q       H  +V+ G    +AL 
Sbjct: 434 QTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFH--QVACGYSMTIALA 491

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +SG+V+T G    G LG+     K   +    L S L  ++        VL     VY +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTW 551

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G    G LG    G+ DK  +P I+D+L+  HV  I+ G   T  +
Sbjct: 552 GMGANGRLGHG--GIEDK-KKPTIVDALKDRHVKSIACGSNFTTCI 594



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 20/291 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  ++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 311 IACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP-KRVSGPLEGLQVLSVACG 369

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 112
             H+A  + SG+VFT GD +    GH +     + P+ VE+L G    +V  G+      
Sbjct: 370 SWHSALAMSSGKVFTFGDGTFGALGHGNRENVAY-PKEVESLSGFRTMKVACGVWHSAAI 428

Query: 113 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               + TG   +   + T G     +LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 429 VETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVD-NNFHQVACGYSMT 487

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+  +G V++ GS +   LG+  + D  QP  +Q      + V  +S G  HV  L S 
Sbjct: 488 IALATSGHVFTMGSSNYGQLGN-PKADGKQPCQVQDKLSSEL-VEEISCGSYHVAVLTSR 545

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 278
             VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 546 SEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICI 596



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 20/228 (8%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V QI+ G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 247 PLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVS 306

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS-SLKSHLAV 265
            +  +  + G+ H  A+ +SG +Y WG G    G LGHG      LP+ +S  L+    +
Sbjct: 307 NVEYI--ACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVL 364

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      + + + +G V+ FG   FG+LG  +R   + V  P+ ++SL      +++ G
Sbjct: 365 SVACGSWHSALAMSSGKVFTFGDGTFGALGHGNR---ENVAYPKEVESLSGFRTMKVACG 421

Query: 326 LYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 363
           ++H+  + +            +LF +GD ++ +LGH      L PT +
Sbjct: 422 VWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVV 469



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V+ S GS +  C     + D L P+ +++     + V ++S G  H+ 
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC----SKTDVLIPKPLES--DVVLDVQQISCGSRHIA 267

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+   G LGHG + D + P+ + SL       +   +  T  +  +G +
Sbjct: 268 LTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDL 327

Query: 284 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y +G  G  + G    G+ +   L  R+   L    V  ++ G +H+ +    G++F FG
Sbjct: 328 YNWG-DGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFG 386

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 387 DGTFGALGHGNRENVAYPKEV 407


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 22/312 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP++V++L  +  K V  G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQ-VNIKVSRPKVVQSLASLHVKDVAYG 324

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYM 168
              T  +T+ G +   G   +  +G  D+  R      K  +PL+ + SVV+IA GP + 
Sbjct: 325 SKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGI-SVVKIACGPWHT 381

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G +Y++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESL--KGSRVKCVACGPWHTAAIVEV 439

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                       ++TWG    G LGH D+  K +P  + SL  +  +QV      T  L 
Sbjct: 440 ISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALS 499

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            TG V+  G    G LG P    +D      +   L++  V  IS+G  H  VVT  G++
Sbjct: 500 VTGVVFTSGSSMHGQLGNPH---ADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKV 556

Query: 339 FGFGDNERAQLG 350
           F +G  +  QLG
Sbjct: 557 FTWGKGKEGQLG 568



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 25/273 (9%)

Query: 9   HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRIN-FP-------SAAHVVQVSA 57
           H   ++  S  +C  ++ G L   G GP   Q  S+ R   FP           VV+++ 
Sbjct: 317 HVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIAC 376

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H A +  SGQ++T GD +    GH DT +   RP+ VE+LKG   K V  G   T  
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVESLKGSRVKCVACGPWHTAA 435

Query: 118 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 436 IVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGTAL 494

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A++  GVV++ GS  +  LG+    D     A++    K   V  +S+G  HV  + +
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGN-PHADGKTVSAVEGLL-KSEFVRHISSGSSHVAVVTT 552

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 553 NGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALE 585



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 23/294 (7%)

Query: 71  VFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           VF  GD   S   CG  DT++P+  P LV++   +  + +  G      +T +G V++ G
Sbjct: 234 VFFWGDAFGSILECG--DTSKPL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           + + G++G+   +    PK +  L  +  V  +A G  +  AVT +G +  +G G    +
Sbjct: 290 NESSGRIGNQVNIKVSRPKVVQSLASL-HVKDVAYGSKHTCAVTVSGELIEWGEGPY--M 346

Query: 189 GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           G  + +   Q    + F    GI VV+++ G  H   + SSG +YT+G G  G LGHGD 
Sbjct: 347 GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT 406

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFP 297
              T P+ + SLK      V      T  +V+  S          ++ +G    G LG  
Sbjct: 407 QGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHA 466

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           D+ +    L P  +DSL  +   Q+S G   TV ++  G +F  G +   QLG+
Sbjct: 467 DKKMK---LIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGN 517



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 147/348 (42%), Gaps = 32/348 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASEN 60
           I  G  H  +I+    V+S G+   G +G+  +    VS  ++    A+ HV  V+    
Sbjct: 269 IACGETHAAIITKQGEVYSWGNESSGRIGN--QVNIKVSRPKVVQSLASLHVKDVAYGSK 326

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   V  SG++   G+      G  D+      F  +L   L G+   ++  G   T  +
Sbjct: 327 HTCAVTVSGELIEWGEGPYM--GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAII 384

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 171
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 385 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLK--GSRVKCVACGPWHTAAIVEVISD 442

Query: 172 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
               +    ++++G      LGH ++  +L P  + +        ++VS G    VAL  
Sbjct: 443 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGTALTVALSV 500

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V+T G    G LG+     KT+      LKS     + +      V+   G V+ +G
Sbjct: 501 TGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWG 560

Query: 288 WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG   F +R        P ++D+L   HV  +S G  +T  V
Sbjct: 561 KGKEGQLGLGDFLNRST------PTLVDALEGRHVESLSCGYNYTAAV 602



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 20/236 (8%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           GDT  +P P  +     +  V  IA G ++   +T  G VYS+G+ S+  +G+       
Sbjct: 248 GDT-SKPLPMLVDSTNML-DVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVS 305

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPL 256
           +P+ +Q+     +HV  V+ G +H  A+  SG +  WG+G Y G L      ++  P  L
Sbjct: 306 RPKVVQSL--ASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYAR-NQWFPHKL 362

Query: 257 -SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
            S L     V++      T ++  +G +Y +G   FG LG  D   +    RP+ ++SL+
Sbjct: 363 FSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVESLK 419

Query: 316 AHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
              V  ++ G +HT  + +          R +LF +GD +R +LGH   +  L PT
Sbjct: 420 GSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 475



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + SL S     V  
Sbjct: 264 LDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAY 323

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
             + T  +  +G +  +G   +  +G  D    ++    ++   L    V +I+ G +HT
Sbjct: 324 GSKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHT 381

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 415


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4224 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4282

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4283 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4341

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4342 KLGHGNRVSYDRPKLVEHLHGM-SVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDS 4400

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4401 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4460

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4461 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4517

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4518 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4564



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRVSYDRPKLVEHLHGMSVADIACG 4371

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  G V T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4432 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4489

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4490 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4549

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4550 EGQLG---DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 159/343 (46%), Gaps = 27/343 (7%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 52
            + I  G     ++S    VF+CG    G LG G      V++  +  P    V       
Sbjct: 3110 IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLG------VTYN-VPLPHQLPVLHQYVVK 3162

Query: 53   -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTA 110
             V V +   HA  +   G+VF+ G+      GH   NR    +PR VEAL+    + V  
Sbjct: 3163 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRQVEALRAKKIRDVAC 3220

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYM 168
            G + +  ++ +G ++T G   +G+LGHGD   +  PK +A L     VVQ+A G   +  
Sbjct: 3221 GSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAG-RRVVQVACGSRDAQT 3279

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            LA+T +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +
Sbjct: 3280 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRA 3337

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G V+TWGKG    LGHG +     P+P+  L+    + V         + D+G VY +G 
Sbjct: 3338 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGD 3397

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
               G  G  +  V+ K   P ++  L    V++++ G  H++ 
Sbjct: 3398 NDHGQQGSGNTFVNKK---PALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3121 IVSQEGRVFACGEGTNGRLGLGVTYNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3178

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P  + +  L     +  +A G S+  A++  G +Y
Sbjct: 3179 DGKVFSWGEGEDGKLGHGNRTTLDKP--RQVEALR-AKKIRDVACGSSHSAAISSQGELY 3235

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3294 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3352

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3353 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      VS+ R       H   V  ++  
Sbjct: 4316 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----VSYDRPKLVEHLHGMSVADIACG 4371

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SGQV T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4430

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4431 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4489

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 4490 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 4547

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +S+L+    V+V      T  L
Sbjct: 4548 NDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 15/269 (5%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            ++ G       GH DT+     P  + AL+    + V  G  ++  +T  G++ T G  
Sbjct: 652 AYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRG 710

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           T+ +LGHG++ DR  P  +A L E   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 711 TYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 770

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +G  +  LQP  +++  R    V R+ AG ++ VAL S G VYTWGK  C  LGH   ++
Sbjct: 771 NGNCNGSLQPILVESLPR----VQRIFAGSQYSVALSSEGQVYTWGKATC--LGH-QLVE 823

Query: 250 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           +     ++P  +SSL+    V +         L  +G V+G+G      +  P    S+ 
Sbjct: 824 RSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV-CPSSVSSEP 882

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           +LR  IL +L     S I+     +++ T
Sbjct: 883 LLRSPILVALPTLPASGIACTAGQSLIWT 911



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 23/304 (7%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V QV  SEN    + Q G++                ++P   P+ +E         +  
Sbjct: 588 QVKQVVCSENQVLLLSQEGKLHAW-----------RLSKPEAEPQPLEEAGHETFISIAG 636

Query: 111 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                 F+ I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G +Y 
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVFCGCTYS 695

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
             +T  G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S 
Sbjct: 696 AVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSE 755

Query: 229 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           G V+ WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G VY 
Sbjct: 756 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RIFAGSQYSVALSSEGQVYT 810

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+
Sbjct: 811 WGKATCLGHQLVERSVQGCSV-PRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRND 869

Query: 346 RAQL 349
             Q+
Sbjct: 870 CQQV 873



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4217 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4268

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4269 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4328

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWG 4388

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4389 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4445

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4446 YGKLGRGGSDGCKLPYKI 4463



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+  G V++ 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQEGRVFAC 3131

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  ++   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3132 GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3191

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3251

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3252 TQ---LKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3308

Query: 359  EPTEI 363
             P EI
Sbjct: 3309 TPHEI 3313



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 7/150 (4%)

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      + V+   
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
           G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  G +
Sbjct: 702 GNLLTWGRGTYARLG---HGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLV 758

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
           F +GD +  +LG+    G L+P  I ++ +
Sbjct: 759 FAWGDGDYGKLGNGNCNGSLQP--ILVESL 786


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 313 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 371

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 372 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 430

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 431 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 488

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 489 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 548

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
            G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 549 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 585



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 299 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 358

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 359 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 477

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 478 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 534

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 535 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 563



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 278

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 338

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 339 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 398

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 399 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 455

Query: 357 CLEPTEI 363
           C  P +I
Sbjct: 456 CKVPMKI 462



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 8/261 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 315 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 373

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
           +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 374 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 432

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 433 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 491

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 492 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 549

Query: 240 GALGHGDEIDKTLPEPLSSLK 260
           G LG G       P  +++L+
Sbjct: 550 GQLGDGTTNAIQRPRLVAALQ 570



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 5   TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 423 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 481

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       T  G 
Sbjct: 482 ALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 540

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 541 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 586



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 213 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 272

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 273 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G+ E  +LGH     C  P  I
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVI 356


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 18/343 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2714

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV----VQIAAGPSYMLAV 171
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G        +A G ++ LAV
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV 2833

Query: 172  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            + +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGH 2891

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G   
Sbjct: 2892 VYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 2951

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2952 EGQLGL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 2991



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 147/329 (44%), Gaps = 16/329 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2649 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2706

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2707 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2765

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSA 217
             G  +   VT +G +++FG+G    LG G   ++  P  +       I         V+ 
Sbjct: 2766 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVAC 2825

Query: 218  GDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  
Sbjct: 2826 GLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVA 2885

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G
Sbjct: 2886 LTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTG 2942

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
             ++ +G N   QLG        EPT + +
Sbjct: 2943 DVYAWGSNSEGQLGLGHTNHVREPTLVTV 2971



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2624 VFLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2678

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2679 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2738

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2739 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2796

Query: 302  SDKVLRPRILDSLRAHHVSQ-------ISTGLYHTVVV-TDRGRLFGFGDNERAQLG 350
            S+K L P  + +L  + + Q       ++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 2797 SNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 2852



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2624 VFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2680

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2681 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2737

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 2738 KLGHGNSDRQRRPRQIEALQGEE 2760


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 157/351 (44%), Gaps = 19/351 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 422 IAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAGNYH 479

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
              +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   T  L 
Sbjct: 480 TCALTSSGGVWCWGRNDSGQLGDGTTTNRST--PGAVGGLPSGV--TAIAAGDYHTCALM 535

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G   D  TP ++  L     V+ IAAG  +  A+TG+  V+ 
Sbjct: 536 SSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPS--GVMAIAAGNYHTCALTGSDGVWC 593

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+ S+  LG G   +   P A+         V  ++AG+ H  AL SSG V+ WG    
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCWGYNLS 650

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G LG    
Sbjct: 651 GQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGDEHTCALTGSGGVWCWGDNYYGQLG---D 706

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 707 GTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 756



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 155/354 (43%), Gaps = 19/354 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 116 IAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAAGGAH 173

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 119
              ++ SG V+  G N S   G       I+    V A+ G+P +   + AG   T  LT
Sbjct: 174 TCALMSSGGVWCWGYNLS---GQLGDGSTIYHITPV-AVSGLPSEVTAIAAGYAHTCALT 229

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G   D  TP ++  L     V  IAAG  Y  A+T +G V+ 
Sbjct: 230 GSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPS--GVTAIAAGGRYTCALTSSGGVWC 287

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G   +   P A+         V  ++AG  H  AL SSG V+ WG    
Sbjct: 288 WGRNDSGQLGDGSFTNRSTPGAVGGLPSG---VTAIAAGGAHTCALTSSGGVWCWGGNDS 344

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D++ P  +S L S +   + A    T     +G V+ +G   +G LG  D 
Sbjct: 345 GQLGDGSYTDRSTPGAVSGLPSGV-TAIAAGGAHTCARTSSGGVWCWGGNFYGQLG--DG 401

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
             +D+   P  +  L +  V+ I+ G YHT  +T    ++ +GDN   QLG  T
Sbjct: 402 TTTDRS-TPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGT 453



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 155/353 (43%), Gaps = 24/353 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GRY   L S+  V+  G +  G LG G  T +         PS   V  ++A   H   +
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG--VTAIAAGGAHTCAL 330

Query: 66  LQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGFLTI 120
             SG V+  G N S   G   + D + P        A+ G+P     + AG   T   T 
Sbjct: 331 TSSGGVWCWGGNDSGQLGDGSYTDRSTP-------GAVSGLPSGVTAIAAGGAHTCARTS 383

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N +GQLG G T DR TP +++ L     V  IAAG  +  A+TG+  V+ +
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS--GVTAIAAGNYHTCALTGSDGVWCW 441

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG G   +   P A+         V  ++AG+ H  AL SSG V+ WG+   G
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCWGRNDSG 498

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   +++ P  +  L S +   + A    T  L+ +G V+ +G    G LG  D  
Sbjct: 499 QLGDGTTTNRSTPGAVGGLPSGV-TAIAAGDYHTCALMSSGGVWCWGLNNRGQLG--DGS 555

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            +D    P  +  L +  V  I+ G YHT  +T    ++ +G N   QLG  T
Sbjct: 556 YTDSS-TPVAVGGLPS-GVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGT 606



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 152/354 (42%), Gaps = 19/354 (5%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT    S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 371 IAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG--VTAIAAGNYH 428

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
              +  S  V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 429 TCALTGSDGVWCWGDNFYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGNYHTCALT 484

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T +R TP ++  L     V  IAAG  +  A+  +G V+ 
Sbjct: 485 SSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPS--GVTAIAAGDYHTCALMSSGGVWC 542

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG G   D   P A+         V+ ++AG+ H  AL  S  V+ WG    
Sbjct: 543 WGLNNRGQLGDGSYTDSSTPVAVGGLPSG---VMAIAAGNYHTCALTGSDGVWCWGTNSD 599

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G+   G LG    
Sbjct: 600 GQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGNYHTCALTSSGGVWCWGYNLSGQLG---D 655

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 656 GTTTNRSTPGAVSGLPSG-VTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGT 708



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 152/354 (42%), Gaps = 19/354 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 320 IAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSG--VTAIAAGGAH 377

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
                 SG V+  G N     G    T+R    P  V  L  GV    + AG   T  LT
Sbjct: 378 TCARTSSGGVWCWGGNFYGQLGDGTTTDRST--PGAVSGLPSGV--TAIAAGNYHTCALT 433

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +G V+ 
Sbjct: 434 GSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGNYHTCALTSSGGVWC 491

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G   +   P A+         V  ++AGD H  AL SSG V+ WG    
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPSG---VTAIAAGDYHTCALMSSGGVWCWGLNNR 548

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D + P  +  L S + + + A    T  L  +  V+ +G    G LG    
Sbjct: 549 GQLGDGSYTDSSTPVAVGGLPSGV-MAIAAGNYHTCALTGSDGVWCWGTNSDGQLG---D 604

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G +     P  +  L +  V+ I+ G YHT  +T  G ++ +G N   QLG  T
Sbjct: 605 GTTTNRSTPVAVSGLPSG-VTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGT 657



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 116/251 (46%), Gaps = 12/251 (4%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L+GV    + AG   T  LT  G V   G N  GQLG G   DR TP +++ L     V 
Sbjct: 59  LQGV--TAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS--GVT 114

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IAAG ++  A+T +G V  +G      LG G   D   P A+         V  ++AG 
Sbjct: 115 AIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG---VTAIAAGG 171

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            H  AL SSG V+ WG    G LG G  I    P  +S L S +   + A    T  L  
Sbjct: 172 AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV-TAIAAGYAHTCALTG 230

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+ +G  GFG LG  D   +D    P  +  L +  V+ I+ G  +T  +T  G ++
Sbjct: 231 SGGVWCWGDNGFGQLG--DGSFTDSS-TPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVW 286

Query: 340 GFGDNERAQLG 350
            +G N+  QLG
Sbjct: 287 CWGRNDSGQLG 297



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 11/224 (4%)

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
           T  R    S +PL+    V  IAAG  +  A+TG+G V+ +G   +  LG G   D   P
Sbjct: 47  TTTRLHTSSFSPLQ---GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTP 103

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
            A+         V  ++AG  H  AL SSG V  WG  Y G LG G   D++ P  +S L
Sbjct: 104 VAVSGLPSG---VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGL 160

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
            S +   + A    T  L+ +G V+ +G+   G LG    G +   + P  +  L +  V
Sbjct: 161 PSGV-TAIAAGGAHTCALMSSGGVWCWGYNLSGQLG---DGSTIYHITPVAVSGLPS-EV 215

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           + I+ G  HT  +T  G ++ +GDN   QLG  +      P  +
Sbjct: 216 TAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAV 259



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 110/254 (43%), Gaps = 14/254 (5%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  L+S+  V+  G +  G LG G  T           PS   V+ ++A   H
Sbjct: 524 IAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIAAGNYH 581

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
              +  S  V+  G NS    G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 582 TCALTGSDGVWCWGTNSDGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGNYHTCALT 637

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V+ 
Sbjct: 638 SSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGDEHTCALTGSGGVWC 695

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG G   +   P A+         V  ++AG  H  AL  SG V  WG    
Sbjct: 696 WGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCWGNNGD 752

Query: 240 GALGHGDEIDKTLP 253
           G LG G  + +T P
Sbjct: 753 GQLGDGRPLYRTTP 766



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 11/218 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M I  G YHT  ++ S  V+  G++  G LG G  T +         PS   V  ++A  
Sbjct: 573 MAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG--VTAIAAGN 630

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGF 117
            H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   T  
Sbjct: 631 YHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGDEHTCA 686

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V
Sbjct: 687 LTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGV 744

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
             +G+  +  LG G       P  + T    G+++  +
Sbjct: 745 MCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 782


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            + I+ G     ++S +  VF+CG    G LG G   T  V       +        V V 
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3120

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3178

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
              ++ +G ++T G   +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T 
Sbjct: 3179 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAG-RRVIQVACGSRDAQTLALTE 3237

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+T
Sbjct: 3238 DGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3355

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3356 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  120 bits (301), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4146 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4204

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4205 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4264 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDS 4322

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4323 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4382

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4383 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4439

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4440 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4486



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4293

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4411

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4471

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4472 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 17/305 (5%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT-- 109
            + +S        V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVH 3120

Query: 110  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            +G      LT+ G V + G    G+LGHG+  TLD+P    +        +  +A G S+
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSH 3177

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVAL 225
              A++  G +Y++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL
Sbjct: 3178 SAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTAL--AGRRVIQVACGSRDAQTLAL 3235

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
               G V++WG G  G LG G       P  +  L     +Q+    + +  L   G V+ 
Sbjct: 3236 TEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            +G   +  LG    G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+
Sbjct: 3296 WGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3352

Query: 346  RAQLG 350
              Q G
Sbjct: 3353 HGQQG 3357



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 30/307 (9%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V Q++ SE+    + Q G+++ C              +P   P+ +E L       +  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNC-----------RLGKPELEPQPIEELAQETILSIAG 620

Query: 111 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                 FL I  +   ++ G+    +LGHGDT  R  P  I+ L+    V  +  G SY 
Sbjct: 621 HCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC--VKAVFCGCSYS 678

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            A+T +G +Y++G G+   LGHG   D+  P  +       I  V + +GD H + L S 
Sbjct: 679 AAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738

Query: 229 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           G VY WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G +Y 
Sbjct: 739 GLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ-----RIFAGAQSSMALTTEGHLYS 793

Query: 286 FGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +G    +G   +    +G S     PR++ SL+   +  ++ G+ H + +T  G +FG+G
Sbjct: 794 WGKASCLGHQQVERSVQGCS----VPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849

Query: 343 DNERAQL 349
            N+  Q+
Sbjct: 850 RNDSQQI 856



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4238 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4293

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4352

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4411

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4469

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4470 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4139 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4190

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4191 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4250

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWG 4310

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4311 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4367

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4368 YGKLGRGGSDGCKLPYKI 4385



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     I+ G   +  V+ +G V++ 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HISGGSKSLFIVSQDGKVFAC 3084

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3204

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+ + +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3205 TQ---LKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3261

Query: 359  EPTEI 363
             P EI
Sbjct: 3262 TPHEI 3266



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 16/237 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   + SN + +S G+     LGHG    + V  T+I+      V  V    +++A +
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP-TKISALDRC-VKAVFCGCSYSAAI 681

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 123
             SG ++T G  +    GH +++     P +V AL       V   +G   +  LT  G 
Sbjct: 682 TWSGNLYTWGRGTYGRLGHGNSDDQCV-PAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+  G   +G+LG+G+      P  +   E +  V +I AG    +A+T  G +YS+G  
Sbjct: 741 VYAWGDGDYGKLGNGNCNSSLQPILV---ETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797

Query: 184 SNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           S  CLGH +    +Q    PR + + + K   +V V+ G  H +AL S G V+ WG+
Sbjct: 798 S--CLGHQQVERSVQGCSVPRLVSSLQHK--RLVDVAVGVAHCLALTSCGEVFGWGR 850



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
           EL+P+ I+   ++ I  +       H +A+DS+   Y+WG G    LGHGD   + +P  
Sbjct: 601 ELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTK 660

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +S+L   +    C     +  +  +G++Y +G   +G LG    G SD    P I+ +L 
Sbjct: 661 ISALDRCVKAVFCGCS-YSAAITWSGNLYTWGRGTYGRLG---HGNSDDQCVPAIVMALA 716

Query: 316 AHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            + +  ++  +G  H++ +T  G ++ +GD +  +LG+      L+P
Sbjct: 717 EYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQP 763



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4136 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4195

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4196 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4252

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4253 EVYAWGEGEDGKLGH 4267


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 71
            +  VF+CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 72   FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3021 FSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFC 187
             +G+LGHGD   +  PK +  L   GS V+Q+A G   +  LA+T +G V+S+G G    
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3136

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LG G       P  I+  R  GI VV++  G +  +AL  +G V+TWGKG    LGHG +
Sbjct: 3137 LGRGGSEGSATPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD 3194

Query: 248  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
                 P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   
Sbjct: 3195 QHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK--- 3251

Query: 308  PRILDSLRAHHVSQISTGLYHTVV 331
            P ++  L A  V++++ G  H++ 
Sbjct: 3252 PALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4070 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4128

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4129 YGSGGRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ L    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4188 KLGHGNRLSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4246

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4247 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4306

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4307 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4363

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4364 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4410



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRLSYDRPKLLEHLNGMSVADIACG 4217

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4278 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4335

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4395

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4396 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 65   VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
            V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 2960 VSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3017

Query: 122  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3018 GKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3074

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 237
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3075 WGLGEYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG  
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3190

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3191 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3242



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
            G++   L  +  VFS G    G LGHG  TT  +   R +    A  +  ++   +H+A 
Sbjct: 3008 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAA 3065

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 122
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDG 3124

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++G 
Sbjct: 3125 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGK 3183

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3241

Query: 243  GHGDEIDKTLP 253
            G G+      P
Sbjct: 3242 GSGNTFVNKKP 3252



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4162 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----LSYDRPKLLEHLNGMSVADIACG 4217

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4276

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4335

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4393

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4394 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           + ++ G+  + +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 661 NAYSWGTGDNRRLGHGDCHSRELPTKIESL--VRRVKSVYCGCSYSAAITLRGNLYTWGR 718

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G+   LGHG   D+  P  +   +   +  V + +GD H + L + G VY WG G  G L
Sbjct: 719 GNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKL 778

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G+        P  +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 779 GNASCNSSLQPLLIECLPR--VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQ 836

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 837 GCSV-PRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASV--CSEP 891



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 75  GDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           GDN     GH D +    P     LV  +K V C     G +++  +T+RG+++T G   
Sbjct: 668 GDNRRL--GHGDCHSRELPTKIESLVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGN 720

Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+VY++G G    LG+
Sbjct: 721 YGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
              +  LQP  I+   R    V RV AG +  +AL   G +Y+WGK  C  LGH   +++
Sbjct: 781 ASCNSSLQPLLIECLPR----VQRVFAGSQFSLALTGEGQLYSWGKASC--LGH-QLVER 833

Query: 251 -----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
                ++P  ++SL+    V V         L   G ++G+G      +  P    S+ +
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI-CPASVCSEPL 892

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           LR  IL +L     S ++     +++ T   R
Sbjct: 893 LRQPILVTLPTLPASGMACTAVQSLIWTQSSR 924



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G V++ 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVFAC 2969

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3089

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3090 TQ---LKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3146

Query: 359  EPTEI 363
             P EI
Sbjct: 3147 TPHEI 3151



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4063 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4114

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4115 LFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4174

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4175 DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4234

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4235 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4291

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4292 YGKLGRGGSDGCKLPYKI 4309



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVS 216
           V Q+A     +L ++  G +Y++         H  + D E QP        +    +   
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNW---------HISKPDTEPQPLDFGDIGSETFISIASH 647

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
               H +A+D++   Y+WG G    LGHGD   + LP  + SL   +    C       +
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRRVKSVYCGCSYSAAI 707

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 334
            +  G++Y +G   +G LG    G+SD    P ++ +L+ H V  ++  +G  HT+ +T+
Sbjct: 708 TL-RGNLYTWGRGNYGRLG---HGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTN 763

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            G ++ +GD +  +LG+ +    L+P  I
Sbjct: 764 EGLVYAWGDGDYGKLGNASCNSSLQPLLI 792



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 66
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 763 NEGLVYAWGDGDYGKLGNASCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTGEGQLYS 819

Query: 127 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++  G ++ +G
Sbjct: 820 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVDVAVGVTHCLALSSAGEIFGWG 875

Query: 182 SGSN 185
              N
Sbjct: 876 RNDN 879



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4060 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4119

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4120 PDGKLFA---TGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4176

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4177 EVYAWGEGEDGKLGH 4191


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 150/318 (47%), Gaps = 26/318 (8%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S  HV+ +SA  +H   +L          +  F          I  P L E+ +   C +
Sbjct: 10  SPPHVLLISAGASHTVALL----------SKQFESSEMLARFLISTPLLPESWR--LCSK 57

Query: 108 VTA-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           V A  +NF G +     V + G    GQLGHGDT DR  P  ++  +    +V +  G  
Sbjct: 58  VNASAVNFPGNV-----VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGAD 111

Query: 167 YMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           Y +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAV 169

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG
Sbjct: 170 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 229

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++
Sbjct: 230 WGWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSK 285

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLGH     CL P ++
Sbjct: 286 YGQLGHGDFEDCLVPRKV 303



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 7/251 (2%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-VFTCGD 76
           V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V++ G 
Sbjct: 70  VCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
                 GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N +G+LG
Sbjct: 129 GDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELG 187

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
            G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G+ +D 
Sbjct: 188 LGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR 246

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  +P  +
Sbjct: 247 LIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 257 SSLKSHLAVQV 267
            +L   L  QV
Sbjct: 304 QALSDKLISQV 314



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 6/192 (3%)

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTW 234
           VV S+G G +  LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+W
Sbjct: 69  VVCSWGRGEDGQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSW 126

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGHGD  D  +P P+ +L+     Q+         +     V  +G    G L
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G +     P+ + +     +  ++ G  H+V +T+ G L+G+G      LG    
Sbjct: 187 GL---GTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243

Query: 355 RGCLEPTEIFIQ 366
              L P ++ I 
Sbjct: 244 NDRLIPEKVNID 255



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYGFGWM 289
           V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY +GW 
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 129

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+  +L
Sbjct: 130 DFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 350 GHDTLRGCLEPTEIFIQE 367
           G  T +    P +I   E
Sbjct: 187 GLGTTKDSHVPQKILAFE 204


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 159/334 (47%), Gaps = 14/334 (4%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            QI  G+  T +I +N +V +CG    G LG G  +    S T ++      V Q+  S  
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQIACGFKHSAV 1142

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
            +T+ G + T G+  +G+LG G   +R TP+ +  LE    +  +A G ++ + V+ +G  
Sbjct: 1143 VTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENY-HIGHVACGLNHTVCVSADGST 1201

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
             ++FG G    LG G    +  P  I+     G+ V +V+ G +  VAL   G+V TWG+
Sbjct: 1202 TWAFGDGDYGKLGLGNTSAKSTPVKIEAL--SGLKVKKVACGTQFSVALTRDGFVLTWGQ 1259

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                            P+ +++L  H   +V      T  L   G+V+G+G    G LG 
Sbjct: 1260 DRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGL 1319

Query: 297  PDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHT 329
               G +  V  P++L  L  +  + QIS G  H+
Sbjct: 1320 ---GHTGTVREPQLLGGLGSSEPIKQISAGRTHS 1350



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 25/321 (7%)

Query: 41   FTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
             T ++  S +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  +    +V A
Sbjct: 1012 LTPLHTSSFSSAQQIICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHSLTIVSA 1069

Query: 100  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
            L+G    Q+   +   G    LT  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1070 LQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1128

Query: 157  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
             V+QIA G  +   VT +G + +FG+G    LG G   +   P  ++    +  H+  V+
Sbjct: 1129 EVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKAL--ENYHIGHVA 1186

Query: 217  AGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
             G  H V + + G   + +G G  G LG G+   K+ P  + +L      +V    + + 
Sbjct: 1187 CGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSV 1246

Query: 276  VLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLR----PRILDSLRAHHVSQISTGLYHT 329
             L   G V  +G          DR  G ++  +R    P+ + +L  H + ++  G  HT
Sbjct: 1247 ALTRDGFVLTWG---------QDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 330  VVVTDRGRLFGFGDNERAQLG 350
            + +T  G ++G+G N   QLG
Sbjct: 1298 LALTSDGNVWGWGLNADGQLG 1318



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)

Query: 214  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 270
            ++  G      + ++G V   G+G  G LG G+  D      +S+L+  +  Q+      
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGS 1084

Query: 271  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
               +  L ++G V+ +G   +G LG    G SD+  RPR +++L+   V QI+ G  H+ 
Sbjct: 1085 DGHSLALTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQIACGFKHSA 1141

Query: 331  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
            VVT  G+L  FG+ +  +LG  T+  C   T   ++ +E
Sbjct: 1142 VVTVDGKLLTFGNGDYGRLGLGTV--CNRKTPERVKALE 1178



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 9/147 (6%)

Query: 232  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            Y WG G  G L    E  +++  PL +     A Q+   +  TFV+   G+V   G   +
Sbjct: 994  YLWGGGRHGQLC---EAGRSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSY 1050

Query: 292  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 348
            G LG   +G SD +    I+ +L+   V+Q+ T +    H++ +T+ G +F +GD +  +
Sbjct: 1051 GRLG---QGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGK 1107

Query: 349  LGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            LGH        P +I   + EE   +A
Sbjct: 1108 LGHGNSDRQRRPRQIEALQGEEVIQIA 1134



 Score = 38.5 bits (88), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 3    ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 55
            +  G  HT+ +S   S+ ++ G    G LG G  + +       + + +     A   Q 
Sbjct: 1185 VACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQF 1244

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
            S +     FVL  GQ    G   +   GH         P+ V  L G   ++V  G   T
Sbjct: 1245 SVALTRDGFVLTWGQDRLIGQTEAQMRGH-------CTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
              LT  G+V   G N  GQLG G T     P+ +  L     + QI+AG ++  A +G
Sbjct: 1298 LALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  120 bits (301), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 167/365 (45%), Gaps = 22/365 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G+ H+L L+++ +V++ G +    LG G E     S T +  P  A V  ++A EN 
Sbjct: 482 VAAGKTHSLALLADGTVWAWGDNSFSALGLGDE--PGASPTPVQVPKLAGVRSLAAGENS 539

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  VL +G V   G       G    +  IF+ P  +  L G+    V  G  ++  L  
Sbjct: 540 SLAVLANGTVMAWGYGLFGQLGSESAS--IFQIPEPIFGLSGITA--VAMGHWYSLALRE 595

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G N  GQLG G T +RP P  +A L +V     IAAG S+ LA+  +G V+++
Sbjct: 596 DGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQV---TAIAAGASHALALRADGTVWAW 652

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GS +   LG G Q     P  +Q        V+ V+AG+ H +AL   G V++WG    G
Sbjct: 653 GSNALGTLGDGTQTSRSTPVQVQGL----TGVIAVAAGEYHSLALREDGTVWSWGNNNEG 708

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG      +  P  +  L      ++ A ++     V+ G +  FG    G LG  +R 
Sbjct: 709 QLGDVTASSRQSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGER- 765

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +   R  I  SLR  +   I+ G+ HT+ V   G ++ +G N   QLG+       +P
Sbjct: 766 -KENQSRGEIA-SLR--NPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQP 821

Query: 361 TEIFI 365
             + +
Sbjct: 822 ITVKL 826



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 148/363 (40%), Gaps = 29/363 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G Y   L+ + +V S G++  G LG G      +  T    P    V  VSA E+H   V
Sbjct: 386 GYYAVALMGDGTVRSWGNNDSGQLGDG----TYIRHTPTPVPGLTGVTAVSAGEDHVVAV 441

Query: 66  LQSGQVFTCGDNSSFCCGH--RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           L  G     GDN     G      NR  P+  P L EA        V AG   +  L   
Sbjct: 442 LSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------SLVAAGKTHSLALLAD 495

Query: 122 GHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G V   G N+   LG GD     PTP  +  L  V S   +AAG +  LAV  NG V ++
Sbjct: 496 GTVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRS---LAAGENSSLAVLANGTVMAW 552

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G G    LG         P  I  F   GI  V +  G  + +AL   G V++WG    G
Sbjct: 553 GYGLFGQLGSESASIFQIPEPI--FGLSGITAVAM--GHWYSLALREDGTVWSWGYNASG 608

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   ++  P  ++ L    A+   A       L   G+V+ +G    G+LG    G
Sbjct: 609 QLGDGTTDERPRPGQVAGLTQVTAI--AAGASHALALRADGTVWAWGSNALGTLG---DG 663

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
                  P  +  L    V  ++ G YH++ + + G ++ +G+N   QLG  T      P
Sbjct: 664 TQTSRSTPVQVQGLTG--VIAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSP 721

Query: 361 TEI 363
            ++
Sbjct: 722 GQV 724



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 19/349 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H + ++S+ S    G +    LG  PE+        +  P       V+A + H
Sbjct: 431 VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN--RGGPVQVPGLTEASLVAAGKTH 488

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +L  G V+  GDNS    G  D   P   P  V+  K    + + AG N +  +   
Sbjct: 489 SLALLADGTVWAWGDNSFSALGLGD--EPGASPTPVQVPKLAGVRSLAAGENSSLAVLAN 546

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G    GQLG         P+   P+  +  +  +A G  Y LA+  +G V+S+G
Sbjct: 547 GTVMAWGYGLFGQLGSESASIFQIPE---PIFGLSGITAVAMGHWYSLALREDGTVWSWG 603

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             ++  LG G   +  +P  +         V  ++AG  H +AL + G V+ WG    G 
Sbjct: 604 YNASGQLGDGTTDERPRPGQVAGL----TQVTAIAAGASHALALRADGTVWAWGSNALGT 659

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G +  ++ P  +  L   +A  V A +  +  L + G+V+ +G    G LG  D   
Sbjct: 660 LGDGTQTSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLG--DVTA 715

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           S +   P  +  L    V +I+ G  H +   + G L  FG N   QLG
Sbjct: 716 SSR-QSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLG 761



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 163/369 (44%), Gaps = 24/369 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H L L ++ +V++ GS+  G LG G +T++    T +       V+ VSA+   
Sbjct: 180 VSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRS---TPVQVVGLTEVIAVSAAGYS 236

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + + G V+  GDN S   G   T      P  V+ L  V    + AG   +  +   
Sbjct: 237 SLALRKDGTVWAWGDNESGQLGD-GTMEGRLTP--VQVLDLVRVTGLAAGRGHSLAVLAD 293

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G+N +GQLG G       P+ +A + ++  VV +AA  S   AV  +G V S+G
Sbjct: 294 GTVRAWGANIYGQLGDGGFSLEGNPRPVA-VSKLTDVVSVAASTSLSFAVHSDGTVSSWG 352

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           S  +  LG  ++ +   P  +         V  VS G  + VAL   G V +WG    G 
Sbjct: 353 SNVDGALGVEQRSNSRVPSKVFGL----TDVATVSVGGYYAVALMGDGTVRSWGNNDSGQ 408

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G  I  T P P+  L    A  V A +     ++  GS   +G   F  LG P   V
Sbjct: 409 LGDGTYIRHT-PTPVPGLTGVTA--VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESV 465

Query: 302 S--DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           +    V  P + ++      S ++ G  H++ +   G ++ +GDN  + LG     G   
Sbjct: 466 NRGGPVQVPGLTEA------SLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGA-S 518

Query: 360 PTEIFIQEM 368
           PT + + ++
Sbjct: 519 PTPVQVPKL 527



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 12/249 (4%)

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
            + V+AG      L   G V   GSN  GQLG G    R TP  +  L EV   + ++A 
Sbjct: 177 VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLTEV---IAVSAA 233

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
               LA+  +G V+++G   +  LG G     L P  +    R    V  ++AG  H +A
Sbjct: 234 GYSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVR----VTGLAAGRGHSLA 289

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           + + G V  WG    G LG G    +  P P++  K    V V A    +F +   G+V 
Sbjct: 290 VLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVHSDGTVS 349

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G    G+LG   R  S+  +  ++        V+ +S G Y+ V +   G +  +G+N
Sbjct: 350 SWGSNVDGALGVEQR--SNSRVPSKVFG---LTDVATVSVGGYYAVALMGDGTVRSWGNN 404

Query: 345 ERAQLGHDT 353
           +  QLG  T
Sbjct: 405 DSGQLGDGT 413



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 135/357 (37%), Gaps = 42/357 (11%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-----FPSAAHVVQVS 56
           +  GRYH+L++  + +V   G                +S+ R +      P    V  VS
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWG----------------LSYLRFDGGVRPVPGLTDVRAVS 181

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           A   HA  +   G V+  G N     G         R   V+ +       V+A    + 
Sbjct: 182 AGNEHALALRTDGTVWAWGSN---FAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAGYSSL 238

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            L   G V   G N  GQLG G    R TP  +  L     V  +AAG  + LAV  +G 
Sbjct: 239 ALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVR---VTGLAAGRGHSLAVLADGT 295

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V ++G+     LG G    E  PR +     K   VV V+A      A+ S G V +WG 
Sbjct: 296 VRAWGANIYGQLGDGGFSLEGNPRPVAV--SKLTDVVSVAASTSLSFAVHSDGTVSSWGS 353

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              GALG     +  +P  +  L     V V         L+  G+V  +G    G LG 
Sbjct: 354 NVDGALGVEQRSNSRVPSKVFGLTDVATVSVGG--YYAVALMGDGTVRSWGNNDSGQLG- 410

Query: 297 PDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                    +R  P  +  L    V+ +S G  H V V   G    +GDN+  QLG 
Sbjct: 411 -----DGTYIRHTPTPVPGLTG--VTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGR 460



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 9/216 (4%)

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           + P+  +  V  ++AG  + LA+  +G V+++GS     LG G +     P  +      
Sbjct: 168 VRPVPGLTDVRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGL--- 224

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
              V+ VSA     +AL   G V+ WG    G LG G    +  P  +  L     +   
Sbjct: 225 -TEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVRVTGL-AA 282

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
            R     VL D G+V  +G   +G LG  D G S +   PR +   +   V  ++     
Sbjct: 283 GRGHSLAVLAD-GTVRAWGANIYGQLG--DGGFSLEG-NPRPVAVSKLTDVVSVAASTSL 338

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +  V   G +  +G N    LG +       P+++F
Sbjct: 339 SFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVF 374



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 17/161 (10%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           V+AG  H + +   G V  WG  Y          D  +  P+  L    AV   A     
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGV-RPVPGLTDVRAV--SAGNEHA 187

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L   G+V+ +G    G LG        K  R   +  +    V  +S   Y ++ +  
Sbjct: 188 LALRTDGTVWAWGSNFAGQLGD-----GTKTSRSTPVQVVGLTEVIAVSAAGYSSLALRK 242

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            G ++ +GDNE  QLG  T+ G L P ++   ++   TGLA
Sbjct: 243 DGTVWAWGDNESGQLGDGTMEGRLTPVQVL--DLVRVTGLA 281


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 28/335 (8%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           ++   +H   +  SG++ + G   S   GH   +     P +++ L     K+V  G+ F
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS-STPSIIDELASQRVKEVACGVAF 172

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  L   G ++T G N +GQLG GD      P+ +  +     V  +A G ++++ +T +
Sbjct: 173 SAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHR-HVHLMACGAAHIVVLTTS 231

Query: 175 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
             VY++G+ S   LGHG +    LQP++++     G+ + ++ AG+ H   + S G +YT
Sbjct: 232 RDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM--SGLDIKQIVAGENHSCVMTSFGDIYT 289

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSL--KSHLAVQVCARKRKTFVLVDT--GSVYGFGWM 289
           WG+G  G LGHGD   K +P  LS L  K+  ++ V       F++  T  G+VY +G  
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSG---ADFIMAMTYSGAVYSWGRN 346

Query: 290 GFGSLGF--------PDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTD- 334
            FG LG          +R  SD V+ P+I+    A        +S IS G +H + +T+ 
Sbjct: 347 CFGQLGHGVDMHYSKSNRFPSD-VISPKIISFFAASEEHDAISLSSISCGSHHVLAITEK 405

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
           +  LF +G  E  QLG D       P    +++M+
Sbjct: 406 KDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMK 440



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 30/316 (9%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFV 65
           +   L+    +++ G +  G LG G  T+  +       PS    HV  ++    H   +
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM---LPSMNHRHVHLMACGAAHIVVL 228

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             S  V+T G+NS    GH    +   +P+ V  + G+  KQ+ AG N +  +T  G ++
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIY 288

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T G    GQLGHGD   +  P  ++PL+       I +G  +++A+T +G VYS+G    
Sbjct: 289 TWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 186 FCLGHG-EQH---------DELQPRAIQTF----RRKGIHVVRVSAGDEHVVAL-DSSGY 230
             LGHG + H         D + P+ I  F        I +  +S G  HV+A+ +    
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408

Query: 231 VYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGS----- 282
           ++ WG+G  G LG    D   + +P+ +  +K  + +   C+      V    GS     
Sbjct: 409 LFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGD 468

Query: 283 --VYGFGWMGFGSLGF 296
             V+ +G   FG LG+
Sbjct: 469 MKVFSWGRGSFGQLGY 484



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ +  ++ G +HV+ALD+SG + +WG+G  G LGH      + P  +  L S    +V 
Sbjct: 108 GLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVA 167

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                +  L++ G +Y +G   +G LG  DR  S     PR+L S+   HV  ++ G  H
Sbjct: 168 CGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSS---AIPRMLPSMNHRHVHLMACGAAH 224

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRG-CLEPTEIFI 365
            VV+T    ++ +G+N   QLGH   +  CL+P  + +
Sbjct: 225 IVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRV 262



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           +L ++  V++ G++  G LGHG     C+    +   S   + Q+ A ENH+  +   G 
Sbjct: 227 VLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---VTAGLNFTGFLTIRGHVHTC 127
           ++T G       GH D       P L+  L   P  Q   + +G +F   +T  G V++ 
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDI-PTLLSPLD--PKTQASLIVSGADFIMAMTYSGAVYSW 343

Query: 128 GSNTHGQLGHGDTL----------DRPTPKSI---APLEE--VGSVVQIAAGPSYMLAVT 172
           G N  GQLGHG  +          D  +PK I   A  EE    S+  I+ G  ++LA+T
Sbjct: 344 GRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAIT 403

Query: 173 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH---VVALDSS 228
                ++++G G +  LG   +    +P   +  + KG+ V+  +  + H   V  +  S
Sbjct: 404 EKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGS 463

Query: 229 G-----YVYTWGKGYCGALGHG 245
           G      V++WG+G  G LG+G
Sbjct: 464 GPKGDMKVFSWGRGSFGQLGYG 485


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 147/317 (46%), Gaps = 30/317 (9%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V+ L  +  K V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDTLSDIRVKNVACG 364

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-------PTPKSIAPLEEVGSVVQIAAG 164
              T  LT  G V+  G++    +   D +D         T K   P+E + S+  IA G
Sbjct: 365 EYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVEGI-SISSIACG 419

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             +   V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESL--KGLCVRSVACGTWHTAA 477

Query: 225 L-----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           +            S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  
Sbjct: 478 IIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMM 537

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T  L + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLT 593

Query: 334 DRGRLFGFGDNERAQLG 350
             G ++ +G  E  +LG
Sbjct: 594 SSGSVYTWGKGENGELG 610



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 23/274 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGS--SLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  +++S  V++ G+  S   ++  G   +Q ++  +++ P     +  ++  
Sbjct: 361 VACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTH-KLSLPVEGISISSIACG 419

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 116
           E H A V   G++FT GD +    GH  +      P+ VE+LKG+  + V  G   T   
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGH-GSYHSFSSPKEVESLKGLCVRSVACGTWHTAAI 478

Query: 117 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 479 IEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 537

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALD 226
            LA+T  G V++ GS     LG+    D    RA+      K  +V  +S G  HV  L 
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 593

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           SSG VYTWGKG  G LG GD  ++  P  + +L+
Sbjct: 594 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALR 627



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 24/274 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  + V  G N    +T +G V+  G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLS 354

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-----K 208
           ++  V  +A G  +  A+T +G VY++G+     +   +  DE + R+     +     +
Sbjct: 355 DI-RVKNVACGEYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVE 409

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           GI +  ++ G+ H   + S G ++T+G G  G LGHG     + P+ + SLK      V 
Sbjct: 410 GISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVA 469

Query: 269 ARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
                T  +++           TG ++ +G    G LG  D   +   L P  +  L  +
Sbjct: 470 CGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHAD---NVNKLVPTCVSQLVDY 526

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              Q+S G   T+ +T+ G++F  G  +  QLG+
Sbjct: 527 DFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGN 560



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 18/163 (11%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + +L       V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVAC 363

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 320
            +  T  L D+G VY +G          D   SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGEVYAWG---------NDVSCSDLVDEGRIRSQWLTHKLSLPVEGISIS 414

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            I+ G +HT +V+  GRLF +GD     LGH +      P E+
Sbjct: 415 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEV 457



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 18/224 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 49
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 416 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHT 475

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++++SA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIIEISAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 532

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 533 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 590

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T +G VY++G G N  LG G+  +   P  ++  R + +  +
Sbjct: 591 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTI 634



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  +A G ++   VT  G VY +G G    LG     D   P+ + T     I V  V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTL--SDIRVKNVAC 363

Query: 218 GDEHVVALDSSGYVYTWGKGY-CGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 274
           G+ H  AL  SG VY WG    C  L   G    + L   LS     +++  +   +  T
Sbjct: 364 GEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHT 423

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 332
            ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +  
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLG---HGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIE 480

Query: 333 ---------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                    T  G+LF +GD +  +LGH      L PT
Sbjct: 481 ISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 518



 Score = 45.1 bits (105), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 13/168 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +Y+T   S   +F+ G +  G LGH     + V  T ++       VQVS        + 
Sbjct: 487 KYNT---STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTLALT 542

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGFLTIRGH 123
             G+VF  G       G+     P  + R V     LK    K ++ G      LT  G 
Sbjct: 543 NMGKVFAMGSAKYGQLGN-----PHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGS 597

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           V+T G   +G+LG GDT +R TP  +  L +   V  I  GPS+ +A+
Sbjct: 598 VYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCGPSFTVAI 644


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 145/323 (44%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VFT G+ S    GH         PRLVE L       V  G
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGH-GFETDFSCPRLVEFLAVTNVDFVACG 325

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  T   G LG G  +    PK ++ PLE +  V  IA G  + 
Sbjct: 326 EYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGL-QVFSIACGTWHS 384

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
              T NG +++FG G+   LGHG++     P+ +Q     G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLL--SGLKTIKVACGVWHTAAIVEV 442

Query: 227 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG +    LP  +SSL  +   Q+   +  T  L 
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALT 502

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    SD  +   + DSL    V ++S G +H  V+T R  L
Sbjct: 503 TSGHVFTMGGTAHGQLGNP---ASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSEL 559

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH        PT
Sbjct: 560 YTWGKGANGRLGHGDTEDRRTPT 582



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 13/271 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +  +Q+  G+     +T +G V T G  + G+LGHG   D   P+ + 
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVE 312

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT +G +Y++G G+     LG G       P+ + +   +
Sbjct: 313 FL-AVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRV-SGPLE 370

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  ++ G  H     S+G ++T+G G  G LGHGD    + P+ +  L     ++V 
Sbjct: 371 GLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVA 430

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                T  +V+  S  G        F W G G       G  D  L P  + SL  ++  
Sbjct: 431 CGVWHTAAIVEVMSQSGANVSSRKLFTW-GDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           QI+ G   TV +T  G +F  G     QLG+
Sbjct: 490 QIACGQTLTVALTTSGHVFTMGGTAHGQLGN 520



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  ++ S     +  G+   G+LG G + +  +   R++ P     V  ++  
Sbjct: 322 VACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIP-KRVSGPLEGLQVFSIACG 380

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 111
             H+A    +G++FT GD +    GH D     F P+ V+ L G+   +V  G       
Sbjct: 381 TWHSALATSNGKLFTFGDGAFGVLGHGDRESLSF-PKEVQLLSGLKTIKVACGVWHTAAI 439

Query: 112 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
              ++ +G       + T G     +LGHG       P  ++ L +  +  QIA G +  
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDY-NFHQIACGQTLT 498

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  ++  LG+    D   P  +Q     G  V  VS G  HV  L S 
Sbjct: 499 VALTTSGHVFTMGGTAHGQLGN-PASDGKMPTLVQD-SLVGEFVEEVSCGAHHVAVLTSR 556

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             +YTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALK 588



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 23/232 (9%)

Query: 145 TPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           TPK   PLE   V  V QIA G  ++  VT  G V+++G  S   LGHG + D   PR +
Sbjct: 255 TPK---PLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLV 311

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLK 260
           +      +    V+ G+ H  A+ +SG +YTWG G    G LG G ++   +P+ +S   
Sbjct: 312 EFLAVTNVDF--VACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPL 369

Query: 261 SHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             L V  +      + +    G ++ FG   FG LG  DR   + +  P+ +  L     
Sbjct: 370 EGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDR---ESLSFPKEVQLLSGLKT 426

Query: 320 SQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +++ G++HT  + +            +LF +GD ++ +LGH +    L PT
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPT 478



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 24/238 (10%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           I  G +H+ L  SN  +F+ G    GVLGHG    + +SF + +   S    ++V+    
Sbjct: 377 IACGTWHSALATSNGKLFTFGDGAFGVLGHGDR--ESLSFPKEVQLLSGLKTIKVACGVW 434

Query: 61  HAAFVLQ----------SGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQV 108
           H A +++          S ++FT GD      GH  +DT      P  V +L      Q+
Sbjct: 435 HTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDT---YLLPTCVSSLIDYNFHQI 491

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G   T  LT  GHV T G   HGQLG+  + D   P ++     VG  V+ ++ G  +
Sbjct: 492 ACGQTLTVALTTSGHVFTMGGTAHGQLGNPAS-DGKMP-TLVQDSLVGEFVEEVSCGAHH 549

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +  +T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G     ++
Sbjct: 550 VAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR--HVKNISCGSNFTTSI 605



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+     +  V+  GS S+  +    ++D L P+ +++     + V +++ G  HV 
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSSVPI----KNDVLTPKPLES--NVVLDVQQIACGVRHVA 278

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            +   G V+TWG+   G LGHG E D + P  +  L       V   +  T  +  +G +
Sbjct: 279 LVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDL 338

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y +G  G  + G   +G       P R+   L    V  I+ G +H+ + T  G+LF FG
Sbjct: 339 YTWG-DGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFG 397

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 398 DGAFGVLGHGDRESLSFPKEV 418


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 277 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 336

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 337 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 455

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 456 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 512

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 513 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 541



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 291 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 349

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 350 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 408

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 409 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 466

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 526

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 527 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 293 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 351

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
           +A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T  LT
Sbjct: 352 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTLCLT 410

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 411 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 469

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 470 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 527

Query: 240 GALGHG 245
           G LG G
Sbjct: 528 GQLGDG 533



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 256

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 316

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 376

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 377 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 433

Query: 357 CLEPTEI 363
           C  P +I
Sbjct: 434 CKVPMKI 440



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5   TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 401 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 459

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 460 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 518

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 519 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 564



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D+ +++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 191 DDWILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 250

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 251 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G+ E  +LGH     C  P  I
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVI 334


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 93  RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 210
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 269
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 330 VVVTDRGRLFGFGDNERAQL 349
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS  +  L   G+  +    +P +I     K + V+ +S G EH   L   
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEE 253

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   G
Sbjct: 254 GQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 14/301 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRR-DQSTERPEPIQALNDLHVDL 78

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 166
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 226 DSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             +G  + WG    G L   G+++ + +  P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 342 G 342
           G
Sbjct: 312 G 312



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
           +PR ++     GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ 
Sbjct: 11  KPRRLKA-GTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69

Query: 258 SLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
           +L   H+ +  C  K  +  +   G V+ +G    G LG  +    +    P  + +L  
Sbjct: 70  ALNDLHVDLVSCG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAG 126

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 13/337 (3%)

Query: 2    QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4164

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4165 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4223

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    V Q+A G ++ L V+ +G +
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY-HVGQVACGLNHTLVVSADGMM 4282

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G V+T+G+
Sbjct: 4283 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGKVFTFGQ 4340

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                 L  G   +   P+ +  L       V      T VL  TG VY +G    G LG 
Sbjct: 4341 DRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4401 ---GHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWT 4434



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 140/301 (46%), Gaps = 22/301 (7%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNF 114
            +  FV+ S G V  CG  S    G  D+N      +L      A+K V   + + G   
Sbjct: 419 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDG--H 476

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+ +
Sbjct: 477 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 536

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYT 233
           G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V++
Sbjct: 537 GELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWS 592

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---WMG 290
           +G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    +G
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 652

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q G
Sbjct: 653 CGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 705

Query: 351 H 351
            
Sbjct: 706 Q 706



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 13/320 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q +G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4099 PSFSQAQQVVCGQN-CTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4156

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4157 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4215

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G HV +V+ G  H 
Sbjct: 4216 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTAL--EGYHVGQVACGLNHT 4273

Query: 223  VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            + + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4274 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4333

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ FG      +G P+ G +    RP+ +  L   H+  ++ G  HT+V++  G ++ +
Sbjct: 4334 KVFTFGQDRL--IGLPE-GRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTW 4390

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4391 GSNSEGQLGLGHTNHVREPT 4410



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 590

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 649

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 650 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 705

Query: 244 HGD 246
            G+
Sbjct: 706 QGN 708



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 11/230 (4%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G+  HGQL   G  +  PT   IAP        Q+  G +    +  NG V + G 
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILVPT---IAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 4128

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4129 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4188

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4189 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4246

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L P  + +L  +HV Q++ GL HT+VV+  G + + FGD +  +LG
Sbjct: 4247 SNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLG 4295



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + S G V   GK
Sbjct: 381 VYVWGSNSSHQLVEGTQEKILQPKLASSF----ADAQTIEAGQYCTFVISSDGSVRACGK 436

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H A++  +  +     T      G V+ +G   +G
Sbjct: 437 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 495

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 496 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 552



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 636 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 693

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 694 YAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4074 VFLWGAGRHGQLA---EAGRNILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 4130

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4131 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4187

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 4188 KLGHGNSDRQRRPRQIEALQGEE 4210


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           SA   +QV   E     V   G+V+  G  +    G   T+  +  P L+E+L+ V  K+
Sbjct: 612 SALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VSCPTLLESLQHVFIKK 670

Query: 108 V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +A G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRG-KEVVDVACGG 729

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           ++   +T +G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD   + +
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCV 789

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
                V++WG G  G LG G      +P  +  L+    ++V    + +  L  +GSVY 
Sbjct: 790 TDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYT 849

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G   +  LG    G  D V RP+ + +L+   V  I+ G  H V  TD G ++ +GDN+
Sbjct: 850 WGKGDYHRLG---HGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDND 906

Query: 346 RAQLGHDTLRGCLEP 360
             QLG  T+    +P
Sbjct: 907 EGQLGDGTVNAIHKP 921



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 11/282 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+V++ G+      GH + +    RPR++E+L+G     V  G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGG 729

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYML 169
             +  +T  G ++T G   +G+LGHGD+ D+  PK +  L   G  V+  A   G +  L
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS--GWRVRCVACGSGDAQTL 787

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            VT +  V+S+G G    LG G       P  +     +G+ V+RV  G +  VAL +SG
Sbjct: 788 CVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL--QGMGVIRVECGSQFSVALTASG 845

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G  
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDN 905

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G LG    G  + + +PR++ +L+   ++++S G  HTV 
Sbjct: 906 DEGQLG---DGTVNAIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P   EAL  +   QV  G      +T  G V+  G    G+LG G T     P  +  L+
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQ 664

Query: 154 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
            V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 665 HVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLR--GKEV 722

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCAR 270
           V V+ G  H   + +SG +YTWGKG  G LGHGD  D+  P+ + +L       V   + 
Sbjct: 723 VDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSG 782

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             +T  + D   V+ +G   +G LG   RG SD    P  +D L+   V ++  G   +V
Sbjct: 783 DAQTLCVTDDDCVWSWGDGDYGKLG---RGGSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 331 VVTDRGRLFGFGDNERAQLGHDT 353
            +T  G ++ +G  +  +LGH T
Sbjct: 840 ALTASGSVYTWGKGDYHRLGHGT 862



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 8/246 (3%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  H L +S    V+S G    G LGHG +++ C     I       VV V+    H
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGGAH 731

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLT 119
           +A +  SG+++T G       GH D++  + RP+ VEAL G  V C    +G   T  +T
Sbjct: 732 SACITASGELYTWGKGRYGRLGHGDSDDQL-RPKKVEALSGWRVRCVACGSGDAQTLCVT 790

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V + G   +G+LG G +     P  +  L+ +G V+++  G  + +A+T +G VY+
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMG-VIRVECGSQFSVALTASGSVYT 849

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG      +P+ +     +G  V+ ++ G  H VA   +G VYTWG    
Sbjct: 850 WGKGDYHRLGHGTDDHVRRPKRVAAL--QGKKVICIAVGSLHCVACTDTGEVYTWGDNDE 907

Query: 240 GALGHG 245
           G LG G
Sbjct: 908 GQLGDG 913



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 12/247 (4%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G +   G N  GQLG   G  +  P P ++++ L  +    Q+  G   + AVT +G VY
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPI----QVVGGEQTLFAVTADGKVY 636

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL + G VY+WG+G 
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG++     P  + SL+    V V      +  +  +G +Y +G   +G LG   
Sbjct: 697 DGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLG--- 753

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            G SD  LRP+ +++L    V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 754 HGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDG 813

Query: 357 CLEPTEI 363
           C  P  +
Sbjct: 814 CKVPLRV 820



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG +  WG  + G LG  +     LP P  +L +   +QV   ++  F +   G VY   
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYA-- 637

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFGDNE 345
             G+G+ G    G +D V  P +L+SL+   + +  +++G  H + ++  G ++ +G+ +
Sbjct: 638 -TGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 346 RAQLGHDTLRGCLEPTEI 363
             +LGH     C  P  I
Sbjct: 697 DGKLGHGNKSSCERPRVI 714



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 5   TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL +++   V+S G    G LG G  +  C    R++      V++V      + 
Sbjct: 781 SGDAQTLCVTDDDCVWSWGDGDYGKLGRG-GSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            +  SG V+T G       GH  T+  + RP+ V AL+G     +  G       T  G 
Sbjct: 840 ALTASGSVYTWGKGDYHRLGH-GTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGE 898

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           V+T G N  GQLG G       P+ +A L+
Sbjct: 899 VYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 164/363 (45%), Gaps = 20/363 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L L S+ +V++ G++  G LG G  T   V    +     + VV V A  +H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVP-VQVQGLSEVVAVDAGSSH 59

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G V+  G N+S   G   T   I R   V+ L       V AG +    L   
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETT---ISRSTPVQVLGLSGVLFVAAGSSHVLALRYD 116

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   GSN+ GQ G G T +R  P     L     V+ +AAG ++ LAV  +G  +++G
Sbjct: 117 GTVWAWGSNSSGQRGDGTTNNRALPVQAQGLS---GVMAVAAGDNHSLAVRSDGSAWAWG 173

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           S ++  LG G   +  +P  +Q        VV V+AG  H +A+ S G V+ WG    G 
Sbjct: 174 SNASGQLGEGTTSNRPEPVQVQGLS----GVVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G   D+ +P  +  L     V V A    +  + + G+V+G+G      LG   +G 
Sbjct: 230 LGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KG- 283

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           S ++L P  +  L A  V  ++ G  H++ V   G ++  G N   QLG  T    L P 
Sbjct: 284 SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPV 341

Query: 362 EIF 364
            + 
Sbjct: 342 PVL 344



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 24/364 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ +V++ GS+  G LG   ETT   S T +     + V+ V+A  
Sbjct: 51  VAVDAGSSHSLAVRSDGTVWAWGSNASGQLGD--ETTISRS-TPVQVLGLSGVLFVAAGS 107

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H   +   G V+  G NSS   G   TN     P   + L GV    V AG N +  + 
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRAL-PVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G     GSN  GQLG G T +RP P  +  L     VV +AAG ++ LAV  +G V++
Sbjct: 165 SDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS---GVVAVAAGSAHSLAVRSDGTVWA 221

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+ ++  LG G   D L P  +Q        VV V+AG  H +A+ + G V+ WG+   
Sbjct: 222 WGANASGQLGDGTTTDRLVPVQVQGLS----GVVAVAAGHHHSLAVRNDGTVWGWGRNDS 277

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
             LG G  +   +P  +  L +   V V A    +  +   G+V+  G    G LG    
Sbjct: 278 NQLGKG-SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLG---- 330

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
              D     R++       V  ++   YH++ V   G ++ +G N   QLG  T    L 
Sbjct: 331 ---DGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLV 387

Query: 360 PTEI 363
           P ++
Sbjct: 388 PVQV 391



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 159/357 (44%), Gaps = 34/357 (9%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 54
           M +  G  H+L + S+ S ++ GS+  G LG G     PE  Q    +         VV 
Sbjct: 151 MAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS--------GVVA 202

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           V+A   H+  V   G V+  G N+S   G   T   +  P  V+ L GV    V AG + 
Sbjct: 203 VAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSGVVA--VAAGHHH 259

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  +   G V   G N   QLG G ++    P  +  L    +VV +AAG ++ LAV  +
Sbjct: 260 SLAVRNDGTVWGWGRNDSNQLGKG-SMRLLVPAQVQGLS---AVVAVAAGDTHSLAVGSD 315

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V++ GS +N  LG G     L P  + +       VV V+A D H +A+ S G V+ W
Sbjct: 316 GTVWAVGSNNNGQLGDGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTVWAW 369

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LG G    + +P  +S L     V V A    +  +   GS + +G   +G L
Sbjct: 370 GYNSTGQLGDGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAVRSDGSAWDWGSNAYGQL 427

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G    G +  +  P  +  L    V  +++G  H++ +   G ++ +G N   QLG+
Sbjct: 428 G---DGSTTYLPVPVRVQQLSG--VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGN 479



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 117/252 (46%), Gaps = 21/252 (8%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G +H+L + N  +V+  G +    LG G  + + +   ++   SA  VV V+A +
Sbjct: 251 VAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKG--SMRLLVPAQVQGLSA--VVAVAAGD 306

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V   G V+  G N++   G   T    +R   V  L GV    V+   N    L 
Sbjct: 307 THSLAVGSDGTVWAVGSNNNGQLGDGTTT---YRLVPVPVLSGV----VSVAANDYHSLA 359

Query: 120 IR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +R  G V   G N+ GQLG G T  R  P  ++ L EV SVV   AG  + LAV  +G  
Sbjct: 360 VRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLSEVVSVV---AGGYHSLAVRSDGSA 416

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           + +GS +   LG G       P  +Q     G     V++G  H +AL S G V+TWG  
Sbjct: 417 WDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGA----VASGSSHSLALRSDGTVWTWGYN 472

Query: 238 YCGALGHGDEID 249
             G LG+G  ++
Sbjct: 473 SFGQLGNGPPLN 484



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +    YH+L + S+ +V++ G +  G LG G  TT+ V    +     + VV V A  
Sbjct: 348 VSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP---VQVSGLSEVVSVVAGG 404

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  V   G  +  G N+    G   T   P+  P  V+ L GV    V +G + +  L
Sbjct: 405 YHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPV--PVRVQQLSGVGA--VASGSSHSLAL 460

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPT 145
              G V T G N+ GQLG+G  L+  T
Sbjct: 461 RSDGTVWTWGYNSFGQLGNGPPLNTAT 487


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 15/303 (4%)

Query: 55   VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAG 111
            VS   N  +      +VF  G N     G    ++   P+F P L  AL+ V    +  G
Sbjct: 3043 VSVDNNPPSLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPV---HIAGG 3098

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLA 170
                  ++  G +  CG  T+G+LG G + +  TP++   L  V    V + +G  + LA
Sbjct: 3099 SKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +G VYS+G G +  LGHG +     PR I++    G  V+ ++ G  H   + + G+
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESL--AGERVISIACGSAHSACVTARGH 3216

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGW 288
            +YTWG G  G LGHGD+  + +P+ + +L ++  +QV   +R  +T  L   G V+ +G 
Sbjct: 3217 LYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGD 3276

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              FG LG   RG SD    P  ++ L +  V+Q+  G   ++ +T  G ++ +G  +  +
Sbjct: 3277 GDFGKLG---RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFR 3333

Query: 349  LGH 351
            LGH
Sbjct: 3334 LGH 3336



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 11/310 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA   V ++        V   G++F CG+  N     GH +    +  PR    L  V  
Sbjct: 3088 SALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNN---VSTPRANPYLSHVLV 3144

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            ++V   +G      LT  G V++ G    G+LGHG+ +    P+ I  L     V+ IA 
Sbjct: 3145 RRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAG-ERVISIAC 3203

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            G ++   VT  G +Y++G G    LGHG+ + +L P+ ++      +  V   + D   +
Sbjct: 3204 GSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTL 3263

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            AL + G V++WG G  G LG G      +P  +  L S    QV    + +  L   G V
Sbjct: 3264 ALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            + +G   +  LG    G    V RP ++++LR   V  ++ G  H + VT   +++ +GD
Sbjct: 3324 WTWGKGDYFRLGH---GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGD 3380

Query: 344  NERAQLGHDT 353
            N+  Q G+ T
Sbjct: 3381 NDHGQQGNGT 3390



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 8/346 (2%)

Query: 17   SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
            +V+  G +  G LG G E  +  + T  +  +A + VQ+   E     V   G+V+  G 
Sbjct: 3952 AVYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGY 4010

Query: 77   NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 134
             +    G    +  + +P L+ +++ V   +V   +G      L+  G V++ G    G+
Sbjct: 4011 GAGGRLGIGGIDS-VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 135  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
            LGHG+ +    PK I  L  +  VV IA G ++   +T  G +Y++G G    LGHG+  
Sbjct: 4070 LGHGNRVSYDRPKLITALSGL-EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSE 4128

Query: 195  DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            D+L P+ ++      +  V   +GD   + +     V++WG G  G LG G      LP 
Sbjct: 4129 DQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM 4188

Query: 255  PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
             +  LK    ++V    + +  L   GSVY +G   +  LG    G  + V RP  +  +
Sbjct: 4189 RIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGH---GSYEHVRRPMRVTGM 4245

Query: 315  RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +   +  I+TG  H V  TD G ++ +GDN+  QLG  T      P
Sbjct: 4246 QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRP 4291



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 10/244 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            V   G N   QLG   G  +  P     +P       V IA G   +  V+ +G +++ G
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPV---FSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+N  LG G  ++   PRA        +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3116 EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGK 3175

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+ I    P  + SL     + +      +  +   G +Y +G   +G LG  D  +
Sbjct: 3176 LGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNI 3235

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                L P+++++L  + V Q++ G     T+ +T  G++F +GD +  +LG     GC  
Sbjct: 3236 Q---LVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAI 3292

Query: 360  PTEI 363
            P  +
Sbjct: 3293 PMNV 3296



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            G++   L ++  V+S G    G LGHG   T   +   I   +   V+ ++    H+A V
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRIT-LEAPRLIESLAGERVISIACGSAHSACV 3211

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
               G ++T G       GH D N  +  P++VEAL      QV  G     T  LT  G 
Sbjct: 3212 TARGHLYTWGLGEYGRLGHGDDNIQLV-PKMVEALANYRVIQVACGSRDAQTLALTACGK 3270

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            V + G    G+LG G +     P ++  L  +G V Q+  G  + LA+T +G V+++G G
Sbjct: 3271 VFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLG-VTQVECGAQFSLALTRDGEVWTWGKG 3329

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              F LGHG      +P  ++  R  G  V+ V+ G  H +A+ S   V+ WG    G  G
Sbjct: 3330 DYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQG 3387

Query: 244  HG 245
            +G
Sbjct: 3388 NG 3389



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V+  G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AVT +G VY+ 
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPV----QLVGGEQTLFAVTPDGKVYAT 4008

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+   LG G      QP  + + +   I  V  ++G +H +AL + G VY+WG+G  G
Sbjct: 4009 GYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDG 4068

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+ +    P+ +++L     V +      +  L   G +Y +G   +G LG  D  
Sbjct: 4069 KLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGD-- 4126

Query: 301  VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
             S+  L P+++++L +  V  ++  +G   T+ +TD   ++ +GD +  +LG     GC 
Sbjct: 4127 -SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCK 4185

Query: 359  EPTEI 363
             P  I
Sbjct: 4186 LPMRI 4190



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 62
            G++   L ++  V+S G    G LGHG      VS+ R   I   S   VV ++    H+
Sbjct: 4047 GKHCLALSADGEVYSWGEGEDGKLGHGNR----VSYDRPKLITALSGLEVVCIACGGAHS 4102

Query: 63   AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
            A +   G+++T G       GH D+   +  P+LVEAL       V  G      L I  
Sbjct: 4103 ACLTARGRIYTWGKGRYGRLGHGDSEDQLI-PKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 123  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
              +V + G   +G+LG G +     P  I  L+ +  V+++  G  + +A+   G VY++
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGL-RVIKVECGSQFSVALCQCGSVYTW 4220

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G    LGHG      +P  +     +G  +V ++ G  H VA   +G VYTWG    G
Sbjct: 4221 GKGDYHRLGHGSYEHVRRPMRVTGM--QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEG 4278

Query: 241  ALGHGDEIDKTLPEPLSSLKSHL 263
             LG G  +    P  L +L+ ++
Sbjct: 4279 QLGDGTTLAAQRPRLLMALQVNI 4301



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 36/306 (11%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           + Q++ +E  A  +   G V+T   ++               P LV  L+     QV+  
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPYDT-------------MTPHLVPGLESKTITQVSCH 531

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 167
                +L     G   + G    G+LGHGDT  R  P+   PL  +    VV++AAG + 
Sbjct: 532 SLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQ---PLHHLAHHEVVRVAAGLAC 588

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
              +T  G +Y++G G+   LGHG   + L  QP +      + I  V +  G+   +  
Sbjct: 589 SAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCC 648

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              G V  +G+G  G            P  LS+L      +V   +     L D G VY 
Sbjct: 649 TWEGAVQVFGEGEAGT-----------PRALSALAMFRVTRVYTGEHWHAALTDGGQVYT 697

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G      LG    G  +    P+++++L+   +  +S G  H + ++  G LF +G +E
Sbjct: 698 WGKGDGYRLGH---GNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHE 754

Query: 346 RAQLGH 351
           R Q+ +
Sbjct: 755 RTQISN 760



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 24/193 (12%)

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G  +S+G G +  LGHG+      P+ +         VVRV+AG      + S G +YTW
Sbjct: 544 GGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHH--EVVRVAAGLACSAVITSRGALYTW 601

Query: 235 GKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           G+G  G LGHG   +   P+P+S    +++  + V +   +  T      G+V  FG   
Sbjct: 602 GRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGE 661

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G+              PR L +L    V+++ TG +    +TD G+++ +G  +  +LG
Sbjct: 662 AGT--------------PRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLG 707

Query: 351 HDTLRGCLEPTEI 363
           H    G +E T+I
Sbjct: 708 H----GNMESTKI 716



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 17/156 (10%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           I + +++  ++  + L   G VYT               D   P  +  L+S    QV  
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVYTL------------PYDTMTPHLVPGLESKTITQVSC 530

Query: 270 RK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
               R        G  + +G    G LG  D    D    P+ L  L  H V +++ GL 
Sbjct: 531 HSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDA---PQPLHHLAHHEVVRVAAGLA 587

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + V+T RG L+ +G   + +LGH T+  CL P  +
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV 623



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 12   LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
            L +   VFS G    G LG G  +  C     +   ++  V QV      +  + + G+V
Sbjct: 3265 LTACGKVFSWGDGDFGKLGRG-GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 72   FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
            +T G    F  GH   +  + RP LVEAL+G     V  G      +T    V   G N 
Sbjct: 3324 WTWGKGDYFRLGH-GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382

Query: 132  HGQLGHGDTLDRPTPKSIAPLEEV 155
            HGQ G+G T     P  +A +E V
Sbjct: 3383 HGQQGNGTTCVNRRPALVAGVEGV 3406


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 168/356 (47%), Gaps = 21/356 (5%)

Query: 18  VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F  G++  G LG G  E  Q +  ++I +   A + Q++    H  F+  +G+V+ CG+
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     GH   N P  RP L+  L+      +  G   +  LT  G V + G N  GQLG
Sbjct: 63  NDQAQLGH---NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLG 119

Query: 137 HG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
              D      PK I  L     VVQIA G ++ LA+T  G +YS+GS     LG  +   
Sbjct: 120 QSTDQSIIELPKIIRSLVS-KHVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-VKPPQ 177

Query: 196 ELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           EL     P  + T    GI +  ++ G  H   +  S  V+ +G+  CG LG  DE ++ 
Sbjct: 178 ELSHCNYPLRLTTLL--GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRA 235

Query: 252 LPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G +   + PR
Sbjct: 236 YPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGTYGQLG---HGSNTNEMLPR 290

Query: 310 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           ++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG+ +      P E+ 
Sbjct: 291 MVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVL 346



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 21/304 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  HTL L +N  V++CG++    LGH   T + +    +       VV ++    
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPEL---QNYVVVAIACGSR 96

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQV + GDN     G       I  P+++ +L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 121 RGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            G +++ GSN +GQLG        H +   R T     PL        IA G ++   ++
Sbjct: 157 CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPL------ATIACGGNHSFLIS 210

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +  V+ FG  +   LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+
Sbjct: 211 KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 268

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGF 291
           T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG    
Sbjct: 269 TCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328

Query: 292 GSLG 295
           G LG
Sbjct: 329 GQLG 332



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 6/150 (4%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H+ LIS SS VF  G + CG LG   E+ +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 119
           + F+   G VFTCG  +    GH  +TN  +  PR+V  L G    QV  G   T   + 
Sbjct: 258 SVFLTNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVP 315

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
            RG V+  G  + GQLG+  T     P+ +
Sbjct: 316 SRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 23/332 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 346

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 347 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 405

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 406 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 463

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 464 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 523

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 338
           +G ++  G   +G LG P+    +    PR++ + L    V ++  G YH  V+T  G +
Sbjct: 524 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEV 579

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           + +G     +LGH  +     PT  F++ + +
Sbjct: 580 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 609



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 296 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 354

Query: 67  QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 355 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 414

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 175
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 415 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 473

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG+++T G
Sbjct: 474 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHIFTAG 531

Query: 236 KGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
               G LG+ +  D   P  +   L     V+V        VL  +G VY +G    G L
Sbjct: 532 SSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 590

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           G  D  ++D+   P  +++LR   V +I+ G   T  +
Sbjct: 591 GHGD--IADRKT-PTFVEALRDRSVKRIACGSGFTAAI 625



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 22/273 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 343 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 401

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 402 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 458

Query: 117 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 459 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 517

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V  G  HV  L  
Sbjct: 518 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVVCGAYHVAVLTQ 575

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 576 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 608



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 274 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 333

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 334 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 391

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 392 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 451

Query: 269 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 452 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 508

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 509 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 540



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + V  V+ G +H   +     V+TWG+   G LGHG       P  + SL       +  
Sbjct: 286 LDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIAC 345

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 328
            +  T  +  TG +Y +G  G  + G    G +     P R+   L    VS +S G +H
Sbjct: 346 GEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWH 404

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T ++T  G+L+ FGD     LGH        P E+
Sbjct: 405 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 439


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 391 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 449

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 450 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 508

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 509 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 566

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 626

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 627 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 377 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 436

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 437 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 555

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 556 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 612

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 613 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 641



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 393 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 451

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
           +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 452 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 510

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 511 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 569

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 570 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 627

Query: 240 GALGHG 245
           G LG G
Sbjct: 628 GQLGDG 633



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 356

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 416

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 417 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 476

Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 477 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 533

Query: 357 CLEPTEI 363
           C  P +I
Sbjct: 534 CKVPMKI 540



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5   TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 501 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 559

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 560 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 618

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 619 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 664



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 291 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 350

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 351 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 407

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G+ E  +LGH     C  P  I
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVI 434


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 158/336 (47%), Gaps = 25/336 (7%)

Query: 30  GHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 88
           GH P T   +S  R+   S    VQ ++  E HAA V + GQVF+ G+ +    GH+ T+
Sbjct: 213 GHVPATN--ISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHK-TS 269

Query: 89  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP-- 146
             +  P+++++L   P K +  G  +T  +++ G ++  G   H  LG G    + +P  
Sbjct: 270 DSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWF 328

Query: 147 --KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
             K I+  + + SV++IA G  +   ++  G +Y++G G+   LGHG+ H  + P+ +++
Sbjct: 329 PHKLISTSDGI-SVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES 387

Query: 205 FRRKGIHVVRVSAGDEHVVA-------LDSS---GYVYTWGKGYCGALGHGDEIDKTLPE 254
            R  G     V+ G  H  A       L SS   G ++TWG    G LGH ++  K +P 
Sbjct: 388 LR--GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPT 445

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + SL      QV      T VL  TG V+  G    G LG      SD      +   L
Sbjct: 446 RVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLG---NSRSDNTSICMVEGPL 502

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +   V  IS G  H  V+T  G++F +G     QLG
Sbjct: 503 KTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLG 538



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           I  PRL+++ + +  + +  G      +T +G V + G    G+LGH  +     PK I 
Sbjct: 220 ISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIID 279

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP----RAIQTFR 206
            L     V  IA G  Y  AV+ +G +Y +G G +  LG G+   +  P    + I T  
Sbjct: 280 SLAST-PVKTIAFGAKYTCAVSVSGELYEWGEGIH-SLGFGKNQCQRSPWFPHKLIST-- 335

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
             GI V++++ G  H   + S G +YT+G G  G LGHGD      P+ + SL+   A  
Sbjct: 336 SDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKS 395

Query: 267 VCARKRKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
           V      T  +V+T          G ++ +G  G G LG  ++      L P  ++SL  
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSK---LVPTRVESLID 452

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              +Q+S G+  T V+T  G +F  G  E  QLG+
Sbjct: 453 CDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGN 487



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V++++  + H A +   G+++T G  +    GH DT+  +  P+ VE+L+G   K V  G
Sbjct: 341 VLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTH-SVVHPKEVESLRGSRAKSVACG 399

Query: 112 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +     T++     G + T G    G+LGH +   +  P  +  L +     Q+
Sbjct: 400 PWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC-DFTQV 458

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           + G S    +T  GVV++ GS  +  LG+    +      +     K   V  +S G  H
Sbjct: 459 SCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDN--TSICMVEGPLKTEFVKDISCGSSH 516

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           V  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 517 VAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 555



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 20/224 (8%)

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++ +V  IA G  +   VT  G V+S+G  +   LGH        P+ I +       V 
Sbjct: 230 QILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSL--ASTPVK 287

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAV-QVCA 269
            ++ G ++  A+  SG +Y WG+G   +LG G    +     P  L S    ++V ++  
Sbjct: 288 TIAFGAKYTCAVSVSGELYEWGEGI-HSLGFGKNQCQRSPWFPHKLISTSDGISVLKIAC 346

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
            +  T ++   G +Y +G+  FG LG  D   +  V+ P+ ++SLR      ++ G +HT
Sbjct: 347 GQWHTAIISSLGKLYTYGYGTFGVLGHGD---THSVVHPKEVESLRGSRAKSVACGPWHT 403

Query: 330 VVVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             + +           G+LF +GD    +LGH   +  L PT +
Sbjct: 404 AAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRV 447



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 141/345 (40%), Gaps = 24/345 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 60
           I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  V  ++    
Sbjct: 237 IACGEKHAAIVTKQGQVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPVKTIAFGAK 294

Query: 61  HAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +   V  SG+++  G+   S   G     R P F  +L+    G+   ++  G   T  +
Sbjct: 295 YTCAVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAII 354

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGN--- 174
           +  G ++T G  T G LGHGDT     PK +  L   GS  + +A GP +  A+      
Sbjct: 355 SSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVETSGT 412

Query: 175 -------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
                  G ++++G      LGH  +  +L P  +++         +VS G      L  
Sbjct: 413 LKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESL--IDCDFTQVSCGMSLTAVLTI 470

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V+T G    G LG+    + ++      LK+     +        VL   G V+ +G
Sbjct: 471 TGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWG 530

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               G LG  D    D+   P ++++L    V  I+     T V 
Sbjct: 531 KGTEGQLGLGD--YVDRS-SPTLVEALEDKQVDSIACSSNFTAVT 572



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           PR+L S +  +V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKII 278


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 22/315 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 365

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
              +  +T+ G ++  G N +  G LG G    +  P+ +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGI-HVSSVSCGPWHT 424

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             VT  G +++FG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESL--KGLRTMRAACGVWHTAAVVEI 482

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAA 542

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  TG VY  G   +G LG P    +D +L  R+   L  + V +++ G YH  V+T R 
Sbjct: 543 LTTTGQVYTMGSPVYGQLGNPQ---ADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRT 599

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  ++ S    ++   +   G+LG G E TQ V   +++ P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP-RKLDGPLEGIHVSSVSCG 420

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSIPREVESLKGLRTMRAACGVWHTAAV 479

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G     +LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVE-PNFCQVACGHS 538

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
              A+T  G VY+ GS     LG+  Q D + P  ++    K   V  ++ G  HV  L 
Sbjct: 539 LTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNF-VEELACGAYHVAVLT 596

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALK 630



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 40/354 (11%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 56
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 310 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 363

Query: 57  ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAG 111
             E H+  V  SG ++  G N+       CG   T    + PR ++  L+G+    V+ G
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLDGPLEGIHVSSVSCG 420

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVV 159
              T  +T  G + T G  T G LGHGD +    P+ +  L+               +VV
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVV 480

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           +I  G S   +   +G ++++G G    LGHG++   L P  + T      +  +V+ G 
Sbjct: 481 EIMVG-SSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP--NFCQVACGH 537

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV 278
               AL ++G VYT G    G LG+  + D  LP  +   L  +   ++        VL 
Sbjct: 538 SLTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEELACGAYHVAVLT 596

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               VY +G    G LG  D   +D    P ++++L+   V  I  G   T  +
Sbjct: 597 SRTEVYTWGKGANGRLGHGD---ADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKG 209
           L+   +V  +A G  +  AVT +G +Y +G  + NF  LG G +  +  PR +     +G
Sbjct: 354 LKNF-NVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDG-PLEG 411

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           IHV  VS G  H   + S+G ++T+G G  G LGHGD I  ++P  + SLK    ++   
Sbjct: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAAC 471

Query: 270 RKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
               T  +V+            +G ++ +G      LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDK---EARLVPTCVATLVEP 528

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
           +  Q++ G   T  +T  G+++  G     QLG+    G L PT +       F++E+
Sbjct: 529 NFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEEL 585



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 226 DSSGYVYTWGKGYCGAL---------GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           D+ G VY WG+G    +         G G ++D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTGDGILGGGVHRIGGSGVQMDSFVPKALES-AVLLDVQAIACGRQHAA 318

Query: 277 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           LV   G V+ +G    G LG    GV   V  P+ +D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS 375

Query: 336 GRLFGFGDN 344
           G L+ +G N
Sbjct: 376 GDLYIWGGN 384


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 162/375 (43%), Gaps = 32/375 (8%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HT+ + S   V+S G++  G LG G    QC     I       + Q +    
Sbjct: 140 RVVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKP-CLIRSLQGIRITQAAVGSR 198

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               V  +G V+  G +     G          P++VE+LKG+   Q + G +F+  L+ 
Sbjct: 199 RTMLVSDTGSVYVFGQD--IFAGLEFAGDYTSSPKVVESLKGIFVVQASVGGHFSAVLSR 256

Query: 121 RGHVHTCGSNTHGQLGH-GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-- 176
            G V+T       +LGH  D  D  P   S+ P + +  V+QIAAG  Y+L +       
Sbjct: 257 EGQVYTFCWGHDARLGHHSDPTDLEPRLLSVPPKDAL--VMQIAAGNCYLLMLVYQPTGM 314

Query: 177 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS G G    LGHG       PR IQ F+   +  V VSAG  H   L S G V+TWG
Sbjct: 315 SVYSVGCGEGGKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWG 374

Query: 236 -KGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
                G LGH D+ +   LP  ++ L S  A  +      TFV+ D G VY FG     +
Sbjct: 375 WDSDTGCLGHDDKQEYVVLPTAVAGLGSVKATYISTGYCSTFVVTDNGDVYSFGCDHSRN 434

Query: 294 LGFPDRGVSDKVLRPRILDSLRA---HHVSQIS---------------TGLYHTVVVTDR 335
           LG     V + V  P++  +L       V QIS               T   HT V+T+ 
Sbjct: 435 LGV-KADVGEDVRIPKLAANLNVSLNEKVVQISATNTWDWPSRSQNRITSECHTCVLTES 493

Query: 336 GRLFGFGDNERAQLG 350
           GRL+  G     QLG
Sbjct: 494 GRLYSLGRGSEGQLG 508



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 4/147 (2%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           RV AG  H +A+ S G VY++G    G LG G+  ++  P  + SL+     Q     R+
Sbjct: 140 RVVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRR 199

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T ++ DTGSVY FG   F  L F      D    P++++SL+   V Q S G + + V++
Sbjct: 200 TMLVSDTGSVYVFGQDIFAGLEF----AGDYTSSPKVVESLKGIFVVQASVGGHFSAVLS 255

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEP 360
             G+++ F     A+LGH +    LEP
Sbjct: 256 REGQVYTFCWGHDARLGHHSDPTDLEP 282


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3847

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3848 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3906

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3907 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3964

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3965 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4024

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4025 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3834

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3835 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3953

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3954 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4011 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4039



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 24/332 (7%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC---GHRDTNRPIFRPR-LVEALKGV 103
            SA +VVQV+        V   G+V+ CG+ + +     G      PI  P   + AL   
Sbjct: 2741 SALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPI--PHGXITALSSY 2798

Query: 104  PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              K+V   +G + TGF  + G V + G    G+LGH   +    P+ I  L+    +  I
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALK-TKRIRDI 2853

Query: 162  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--D 219
            A G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRD 2911

Query: 220  EHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLV 278
               +AL   G V++ G G    +G G E+    +P+ +  L      Q+    + +  L 
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-TGLYHTVVVTDRGR 337
             +G V+ +G   +  LG    G    V +P++++ LR   +   S +G  H + VTD G+
Sbjct: 2972 KSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 338  LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
            ++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3058



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3754

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3814

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3874

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3875 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3931

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 3932 CKVPMKI 3938



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3791 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3849

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 3850 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 3908

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 3909 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 3967

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 3968 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4025

Query: 240  GALGHG 245
            G LG G
Sbjct: 4026 GQLGDG 4031



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 679

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 736

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 737 -DQCQHFDTLRVTKPEP 752



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2911

Query: 62   AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            A    +   G VF+ GD   +  G     +    P+ +E L G    Q+  G  F+  LT
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V T G   + +LGHG  +    P+ +  L     V    +G  + LAVT +G VY+
Sbjct: 2972 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYA 3031

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3032 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3074



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3957

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3958 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4016

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4017 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4062



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 9/159 (5%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
            VFS G      +G GPE   C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 2923 VFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2982

Query: 78   SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA----GLNFTGFLTIRGHVHTCGSNTHG 133
              F  GH  ++  + +P++VE L+G   K++ A    G      +T  G V+  G N HG
Sbjct: 2983 DYFRLGH-GSDVHVRKPQVVEGLRG---KKIVACSCSGALHCLAVTDSGQVYAWGDNDHG 3038

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            Q G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3039 QQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3076



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3689 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3748

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3749 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3832


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 152
           P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L
Sbjct: 450 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 509

Query: 153 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 510 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 569

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 269
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 570 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 627

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 628 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 684

Query: 330 VVVTDRGRLFGFG 342
           + +T  G ++ +G
Sbjct: 685 LALTKSGVVWTWG 697



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 162
           ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 412 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 465

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 221
            G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 466 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 525

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 526 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 585

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 339
            +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 642

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +GD +  +LG     GC  P  I
Sbjct: 643 SWGDGDFGKLGRGGSEGCNIPQNI 666



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 11/246 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 514

Query: 106 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 515 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 573

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 631

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 632 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 691

Query: 282 SVYGFG 287
            V+ +G
Sbjct: 692 VVWTWG 697



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 117/230 (50%), Gaps = 12/230 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 74
           V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 480 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 538

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 539 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 597

Query: 135 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 191
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 598 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 655

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG   A
Sbjct: 656 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGRLKA 703



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 523 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 581

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 582 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 640

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 641 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 699


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 21/340 (6%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           Q+  G++ T LI S+ +V +CG    G LG G ++  C S  +       +V ++S+S  
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLG-DSNNC-SVPKKPLFDKKYVKKISSSKG 489

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 116
            + H+  +  +G+V++ GD      GH  T+     P+LV+  L G   K V+AG   + 
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDYGKLGH-GTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 175
            +T  G ++T G    G+LGH  T  +  P  +  +E VG V   A G S+ LAV+ +G 
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV---ACGGSHTLAVSQDGK 605

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++SFG G N  LGHG+ + +L+P+ I+     G+++ +V+ G +  +A+ SSG +Y WG
Sbjct: 606 TIWSFGGGENGKLGHGDTNRQLKPKVIEALN--GLYIRKVACGSQSSLAVTSSGQLYAWG 663

Query: 236 KGYCGA-LGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
              CGA LG G  E     P  +  L+S   V +         L     VY +G    G 
Sbjct: 664 ---CGAILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQ 720

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G         + RP+ +  L    V Q+S G  H+V  T
Sbjct: 721 CG--QGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWT 758



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 19/293 (6%)

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGL 112
           S S ++A      G+V+  G N    C H+        I  P+         C+QV AG 
Sbjct: 384 STSHSNANLSGSCGEVYVWGSN----CTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQ 437

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS---YML 169
             T  +   G V  CG  ++G+LG GD+ +   PK   PL +   V +I++      + L
Sbjct: 438 FCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKK--PLFDKKYVKKISSSKGSDGHSL 495

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A+T  G VYS+G G    LGHG    +  P+ ++     G  V  VSAG  H  A+   G
Sbjct: 496 ALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDG 554

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            +YTWG G  G LGH     K  P  + S++S + +  C       V  D  +++ FG  
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES-VGLVACGGSHTLAVSQDGKTIWSFGGG 613

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
             G LG  D   +++ L+P+++++L   ++ +++ G   ++ VT  G+L+ +G
Sbjct: 614 ENGKLGHGD---TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG 663



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 30/310 (9%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQ 107
           QV A +     +   G V  CG  S    G  D+N      +P+F  + V   K +   +
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYV---KKISSSK 488

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQ-IAAGP 165
            + G +    LT  G V++ G   +G+LGHG    +  PK +  PL  VG VV+ ++AG 
Sbjct: 489 GSDGHSLA--LTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPL--VGKVVKCVSAGY 544

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +  AVT +G +Y++G G    LGH     +  P  +Q+    G+    V+ G  H +A+
Sbjct: 545 RHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----VACGGSHTLAV 600

Query: 226 DSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
              G  ++++G G  G LGHGD   +  P+ + +L      +V    + +  +  +G +Y
Sbjct: 601 SQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLY 660

Query: 285 GFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            +G    +G GS  +         LRPR+++ L++  +  I+ G  H + +T    ++ +
Sbjct: 661 AWGCGAILGCGSAEY-------TALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAW 713

Query: 342 GDNERAQLGH 351
           G+N   Q G 
Sbjct: 714 GNNAMGQCGQ 723



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 132/308 (42%), Gaps = 33/308 (10%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFL 118
           +AA +L     F   D +S CC   D N                C   T+    N +G  
Sbjct: 353 YAAVILLEELYFLASDYASNCCSGPDEN----------------CNNSTSHSNANLSGSC 396

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V+  GSN   QL  G      TPK  A   +     Q+ AG      +  +G V 
Sbjct: 397 ---GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQ---QVEAGQFCTFLIYSDGTVG 450

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKG 237
           + G GS   LG G+ ++   P+    F +K +  +  S G D H +AL ++G VY+WG G
Sbjct: 451 ACGKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDG 509

Query: 238 YCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
             G LGHG    + +P+ +   L   +   V A  R +  + + G +Y +G   FG LG 
Sbjct: 510 DYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGH 569

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGHDTLR 355
            D   S     P  + S+ +  V  ++ G  HT+ V+  G+ ++ FG  E  +LGH    
Sbjct: 570 -DYTSSKNF--PTKVQSIES--VGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTN 624

Query: 356 GCLEPTEI 363
             L+P  I
Sbjct: 625 RQLKPKVI 632


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 42  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVE 98
           T IN      +  V  S   A F+L+ G V T G   DN     G             V 
Sbjct: 23  TEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGAENDNIGHSAGSTK----------VS 72

Query: 99  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
           AL+ V    +  G +    +  +G V+  G N   QLG  D    P+PK I  L     +
Sbjct: 73  ALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLS--NKI 130

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSA 217
           VQ+A G S+ L +  NG ++S GS +   LG G++   EL+P        KGI   ++SA
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRP----LISLKGIPFSQISA 186

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G  H   +  SG V+ WG+   G LG GD +D+ +P  L +L+S     +CA +  T  L
Sbjct: 187 GFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAAL 246

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTV-VVTDR 335
              G V+ FG   FG LG    G     V  PR +  L  + V+QI+ G  HTV  V   
Sbjct: 247 TLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKT 306

Query: 336 GRLFGFGDNERAQLGH 351
           G ++ FG+N  +QLG+
Sbjct: 307 GNVYTFGNNNHSQLGY 322



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ----CVSFTRINFPSAAHVVQV 55
           +Q+  G  H+L + SN +++S GS+  G LG G +++      +S   I F       Q+
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFS------QI 184

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           SA   H+  V  SG VF  G N +   G  D  +R +  P L++AL+ +  K + AG   
Sbjct: 185 SAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNV--PVLLKALRSLSVKYICAGELH 242

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--APLEEVGS-VVQIAAGPSYMLAV 171
           T  LT+ G V T GSN  GQLGHG +   P P S      E +G+ V QIA G  + +  
Sbjct: 243 TAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCY 302

Query: 172 TGN-GVVYSFGSGSNFCLGHGEQH 194
            G  G VY+FG+ ++  LG+  +H
Sbjct: 303 VGKTGNVYTFGNNNHSQLGYIPKH 326


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4236 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4294

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4295 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4353

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4354 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4412

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + ++    V++WG G  G LG G      LP
Sbjct: 4413 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLP 4472

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4473 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4529

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4530 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4576



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 71
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 72   FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 3204 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 3261

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 188
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3262 EYGRLGHGDNSTQLKPKLVAALAG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320

Query: 189  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3321 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3378

Query: 249  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
                P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 3379 HVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 3435

Query: 309  RILDSLRAHHVSQISTGLYHTVV 331
             ++  L A  V++++ G  H++ 
Sbjct: 3436 ALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 4383

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 4443

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4444 INDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4501

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4502 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4561

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4562 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3142 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 3256

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 3257 TWGLGEYGRLGHGDNSTQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3373

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3374 --HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3425



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 3191 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 3248

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 122
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGD-NSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 3307

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3308 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3366

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3424

Query: 243  GHGDEIDKTLP 253
            G G+      P
Sbjct: 3425 GSGNTFVNKKP 3435



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  ++  
Sbjct: 4328 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADIACG 4383

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDAQTL 4442

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4443 CINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4501

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 4502 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 4559

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4560 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 9/264 (3%)

Query: 89  RPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           +P   P+L+E +       + +   G +F   + I  + ++ G+    +LGHGDT  R  
Sbjct: 604 KPETEPQLLEEIAHETIVSIASHCEGRHFMA-IDINRNAYSWGNGEDHRLGHGDTHARAV 662

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P  I  L+    V  +  G SY  A+T +G +Y++G G+   LGHG   D+  P  +   
Sbjct: 663 PTKITLLDRC--VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMAL 720

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               I  V + +GD H + L S G+VY WG    G LG+G+      P  + SL      
Sbjct: 721 TEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQ 778

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           +V A  + +  L   G +Y +G          +R  +     PR++  L+   +  ++ G
Sbjct: 779 RVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERS-AQWCSVPRLISGLQHKRIVDVAVG 837

Query: 326 LYHTVVVTDRGRLFGFGDNERAQL 349
           + H + ++  G +FG+G N+  Q+
Sbjct: 838 VAHCLALSSCGEVFGWGRNDSQQI 861



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 3152

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNS 3272

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3273 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3329

Query: 359  EPTEI 363
             P EI
Sbjct: 3330 TPHEI 3334



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4229 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4280

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4281 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4340

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 4400

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ + D   ++ +GD +
Sbjct: 4401 KGRYGRLGHGD---SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD 4457

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4458 YGKLGRGGSDGCKLPYKI 4475



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 16/220 (7%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P S+  L     V QI    S +L ++ +G +Y++               E +P+ ++  
Sbjct: 566 PSSLPLLNCKFQVQQIVCSESIVLILSEDGKLYNWRMFK----------PETEPQLLEEI 615

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             + I  +       H +A+D +   Y+WG G    LGHGD   + +P  ++ L   +  
Sbjct: 616 AHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRCVKA 675

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-- 323
             C       +   +G++Y +G   +  LG    G SD    P ++ +L  H +  ++  
Sbjct: 676 VFCGCSYSAAITC-SGNLYTWGRGTYARLG---HGNSDDQPLPTVVMALTEHEIIDVALG 731

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +G  H++ +T  G ++ +GD +  +LG+  L G + P  +
Sbjct: 732 SGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLV 771



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4226 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4285

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G +D    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4286 PDGKLFA---TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4342

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4343 EVYAWGEGEDGKLGH 4357


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 21/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+    HAA V +  +VFT G+  S   GH      +F+PRLVE+L     + +  G
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GIGTNVFQPRLVESLSTCNVELIACG 323

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 324 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSAVSCGTWHT 382

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 383 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVEV 440

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 441 IISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTT 500

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRL 338
           +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G +
Sbjct: 501 SGHIFTVGSPVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEV 556

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +     PT
Sbjct: 557 YTWGKGTNGRLGHGDIADRKVPT 579



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 18/278 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 320 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSAVSCG 378

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 379 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 437

Query: 119 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
                       G + T G     +LGHGD   +  P  +  L +  +  + A G +  +
Sbjct: 438 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAACGHTLTI 496

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 497 GLTTSGHIFTVGSPVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 554

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
            VYTWGKG  G LGHGD  D+ +P  + +LK     +V
Sbjct: 555 EVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRV 592



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 19/287 (6%)

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 239 DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 295

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 193
           GHG   +   P+ +  L    +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 296 GHGIGTNVFQPRLVESLSTC-NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 355 VSHWIPKRV-SGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 413

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 304
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 414 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 471

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            L+P  + SL  ++  + + G   T+ +T  G +F  G     QLG+
Sbjct: 472 -LKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGN 517



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 246 GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNV 303

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 309
             P  + SL +     +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 362

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 363 VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 416



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 9   HTL---LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           HTL   L ++  +F+ GS + G LG+     +              VV+V+    H A +
Sbjct: 492 HTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQL-GGGGVVEVACGSYHVAVL 550

Query: 66  LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             +G+V+T G  ++   GH D  +R +  P LVEALK    K+V  G +FT  +
Sbjct: 551 TNAGEVYTWGKGTNGRLGHGDIADRKV--PTLVEALKDRSVKRVACGSSFTAAI 602


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 12/335 (3%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G   T  IS +  V++ GS   G LGH  ++ + +    +      ++V+VS   NH
Sbjct: 96  VAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLP-RLVEALKGKNIVKVSIGGNH 154

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 120
            A + + G ++  G  +S   G  +    +F PRL++  L+      V+ G + T  +T 
Sbjct: 155 MAAIDKDGHLYCWGRAASAGSGGTE---HVFIPRLIKGDLEKEKVISVSCGRSHTAAVTE 211

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +G V T G+   G+LGHG+   +  PK +  L E   VV +A G  + + V  +G+ YS 
Sbjct: 212 KGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESGL-YSC 268

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G+     LG G  H E   +  ++    G+  VV +SAGD HV AL   G VYTWG G  
Sbjct: 269 GADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGRE 328

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHG++ D +L +P+ +L++   VQV      T  +   G +Y +G    G LG    
Sbjct: 329 GQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGE 388

Query: 300 GVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVV 332
             S    R  P  + SL A  V  ++ G  H+ V+
Sbjct: 389 LESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 125/270 (46%), Gaps = 6/270 (2%)

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
            RP  RP  VEAL G     V AG + T  +++ G V+T GS  +G+LGH D  +   P+
Sbjct: 76  ERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPR 135

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
            +  L+   ++V+++ G ++M A+  +G +Y +G  ++   G G       PR I+    
Sbjct: 136 LVEALKGK-NIVKVSIGGNHMAAIDKDGHLYCWGRAAS--AGSGGTEHVFIPRLIKGDLE 192

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           K   V+ VS G  H  A+   G V+TWG GY G LGHG++  +  P+ + SL   +    
Sbjct: 193 K-EKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEKVVDVA 251

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
           C R    FV      +Y  G   +G LG         V  PR L       V  IS G Y
Sbjct: 252 CGRDFTIFVC--ESGLYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDY 309

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           H   +   G ++ +G     QLGH     C
Sbjct: 310 HVCALGRDGLVYTWGLGREGQLGHGEKADC 339



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 160/349 (45%), Gaps = 17/349 (4%)

Query: 7   RYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           R     + N ++ +  G +L G LG G E      F  +   S   +V V+A ++  A +
Sbjct: 48  RMKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFP-VEALSGKRIVYVAAGDSCTAAI 106

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              G V+T G       GH D +     PRLVEALKG    +V+ G N    +   GH++
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENL-PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY 165

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
             G       G G T     P+ I    E   V+ ++ G S+  AVT  G V+++G+G  
Sbjct: 166 CWGRAASA--GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
             LGHGE++ + QP+ +Q+   K   VV V+ G +  + +  SG +Y+ G    G LG  
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEK---VVDVACGRDFTIFVCESG-LYSCGADDYGQLGLG 279

Query: 244 --HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
             HG+   +T P  LS       V + A       L   G VY +G    G LG  ++  
Sbjct: 280 RSHGERFVQT-PRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEK-- 336

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +D  L  + +D+LR   + Q++ G  HT  VT  G L+ +G     QLG
Sbjct: 337 ADCSL-AKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 8/177 (4%)

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G +    +P  ++     G  +V V+AGD    A+   G VYTWG G  G LGH D+
Sbjct: 71  LGQGHERPADRPFPVEAL--SGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDD 128

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            ++ LP  + +LK    V+V         +   G +Y      +G       G ++ V  
Sbjct: 129 SNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY-----CWGRAASAGSGGTEHVFI 183

Query: 308 PRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           PR++   L    V  +S G  HT  VT++G ++ +G+    +LGH       +P ++
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKV 240


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 211
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 71  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 127

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 270
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 128 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 187

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 188 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 247

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRG 356
           V+T+ G++F FG +   QL H    G
Sbjct: 248 VLTEDGQVFTFGGSSSEQLQHSPRSG 273



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 58
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 24  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 81

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 200

Query: 178 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 258

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 259 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 311



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 14  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 72

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 131

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 189

Query: 221 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 190 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 249

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 336
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 250 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 305

Query: 337 RLFGFG 342
           ++   G
Sbjct: 306 QVVSLG 311



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 60  NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 189 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 248

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 159
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 249 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 308

Query: 160 QIAAGPS 166
            +  GPS
Sbjct: 309 SLGRGPS 315


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 12/282 (4%)

Query: 86  DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           ++ R +  P + ++L     +QV  G N T  + + G +  CG  ++G+LG G++ D  T
Sbjct: 503 ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFT 560

Query: 146 PKSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
              I+ L+    V+QIA       + LA+T +G V+S+G G    LGHG    + +PR I
Sbjct: 561 LSPISALQGY-VVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
           +  R  G  VV ++ G +H   +   G ++T+G G  G LGHG+  +K  PE +++L+ H
Sbjct: 620 EALR--GEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677

Query: 263 LAVQVCARKRKTFVL-VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
              QV      T VL  D  +V+ FG   +G LG    G       P+ +D L      +
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL---GSCTAKTSPQAIDVLAGIGCKK 734

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           I  G   +VV+T+ GR+F FG           LRG  +P +I
Sbjct: 735 ICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQI 776



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 19/317 (5%)

Query: 44  INFP----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
           +N P    S A   QV   +N    V  +G +  CG+ S    G  +++  +F    + A
Sbjct: 508 VNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDD-LFTLSPISA 566

Query: 100 LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EE 154
           L+G    Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EE
Sbjct: 567 LQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE 626

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
           V   V +A G  +   VT +G +++FG+G    LGHG   ++  P  +    +  I   +
Sbjct: 627 V---VNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIG--Q 681

Query: 215 VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           V+ G  H + L + G  V+ +G G  G LG G    KT P+ +  L      ++C   + 
Sbjct: 682 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 741

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           + VL + G V+ FG       G P+ G      +P+ + +L +H +  +  G  H + +T
Sbjct: 742 SVVLTNDGRVFSFGQERL--TGQPE-GRLRGPQKPQQIQALASHFIDDVCVGAEHVLALT 798

Query: 334 DRGRLFGFGDNERAQLG 350
             G ++G+G+N   QLG
Sbjct: 799 STGEVWGWGNNVDGQLG 815



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 58/323 (17%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           Q+  G+  T ++  N ++ +CG    G LG G  +    + + I+      V+Q++ S  
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMG-NSDDLFTLSPISALQGYVVIQIATSRG 580

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  +  SG+VF+ GD      GH +++R   RPR +EAL+G     +  G   +  
Sbjct: 581 SDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEVVNMACGFKHSAV 639

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
           +T+ G + T G+  +G+LGHG++ ++ TP+ +  LE+  ++ Q+A G ++ L ++ +G  
Sbjct: 640 VTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK-HAIGQVACGLNHTLVLSADGNT 698

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTF------------------------------- 205
           V++FG G    LG G    +  P+AI                                  
Sbjct: 699 VWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQER 758

Query: 206 -------RRKGIH------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
                  R +G              +  V  G EHV+AL S+G V+ WG    G LG G 
Sbjct: 759 LTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGH 818

Query: 247 EIDKTLPEPLSSLKSHLAVQVCA 269
              +  P  +  LK     Q+ A
Sbjct: 819 SNAQREPCVIPDLKGKNIRQISA 841



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           Y WG G  G L         +P    SL S  A QV   +  TFV+   G++   G   +
Sbjct: 491 YLWGGGRHGQLAESGR-GVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSY 547

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 348
           G LG    G SD +     + +L+ + V QI+T      H++ +TD G +F +GD +  +
Sbjct: 548 GRLGM---GNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 604

Query: 349 LGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           LGH        P +I     EE   +A
Sbjct: 605 LGHGNSDRQRRPRQIEALRGEEVVNMA 631


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            S + VV VS    H A V  +G++ T G   +   GH DTN  I  P+++++L      Q
Sbjct: 802  SLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQ 860

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            V  G   T  LT  G V++ G++ +GQLG GD     +P  ++ LE+  +V+QIA+G ++
Sbjct: 861  VQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTH 919

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
               +T +  V  FG+G+            L P        K +H+ R+  G     A+  
Sbjct: 920  CAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSL------KYLHIDRLCCGHYSTAAITE 973

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VYTWG G    LGHG    +T P+ + +L++    Q+    R T  L D+G ++  G
Sbjct: 974  CGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCG 1031

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
               FG LG     +S    +P+ ++SL       +S G  + V + D  R F
Sbjct: 1032 KDSFGQLG----QMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRSF 1079



 Score =  100 bits (249), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 94   PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P  +E+L  V    V+  + F     +R  G + T G   +GQLGHGDT ++  PK I  
Sbjct: 797  PFKLESLSDV----VSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQS 852

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     + Q+  G  + + +T NG VYS+G+     LG G+      P  +    +   +
Sbjct: 853  LTSFW-ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEK--YN 909

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
            V+++++G  H   L +S  V  +G G   A+G    +  +LP  + SLK     ++C   
Sbjct: 910  VLQIASGSTHCAVLTTSKEVLVFGNG--AAMGAASVV--SLPTLVPSLKYLHIDRLCCGH 965

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
              T  + + G VY   W     LG    G +     P+++++LR   + QIS G  HT  
Sbjct: 966  YSTAAITECGDVYT--WGTGQELG---HGGNSTETSPKLIEALRNQSIRQISCGGRHTAF 1020

Query: 332  VTDRGRLFGFGDNERAQLGH 351
            +TD GR+F  G +   QLG 
Sbjct: 1021 LTDSGRIFTCGKDSFGQLGQ 1040



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 17/233 (7%)

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           T RG + T GS ++ +LG   T     +PTP+ + P   +  +  I++G  Y   +T NG
Sbjct: 711 TSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERL-PNFNIPDICSISSGSYYSSVLTENG 768

Query: 176 VVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            VY +G G+        LG  +  D+L P  +++       VV VS G  H  A+ ++G 
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS----DVVSVSIGFCHGAAVRANGE 824

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           +G LG  D         P  + +L  ++V QI++G  H  V+T    +  FG+
Sbjct: 885 YGQLGLGDVTQHSS---PMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN 934



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 2    QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            Q+  G  HT+ L  N  V+S G+S  G LG G + TQ  S  +++     +V+Q+++   
Sbjct: 860  QVQCGEKHTICLTKNGKVYSWGASEYGQLGLG-DVTQHSSPMQVSALEKYNVLQIASGST 918

Query: 61   HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 87
            H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 919  HCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVY 978

Query: 88   ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                        N     P+L+EAL+    +Q++ G   T FLT  G + TCG ++ GQL
Sbjct: 979  TWGTGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQL 1038

Query: 136  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            G     D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 1039 GQMSG-DQNKPKRIESLTKT-TFISVSCGENYNVAL 1072



 Score = 50.4 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)

Query: 179 SFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           ++GS SN  LG     +   +  P  +  F    I  +   +    V  L  +G VY WG
Sbjct: 717 TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSV--LTENGDVYLWG 774

Query: 236 KGYCGA-----LGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGW 288
           +G         LG     D+ LP  L SL   ++V +  C        +   G +  +G 
Sbjct: 775 RGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFC----HGAAVRANGELLTWGV 830

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              G LG  D   ++  + P+I+ SL +  ++Q+  G  HT+ +T  G+++ +G +E  Q
Sbjct: 831 GENGQLGHGD---TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 349 LG 350
           LG
Sbjct: 888 LG 889



 Score = 42.7 bits (99), Expect = 0.32,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 9/154 (5%)

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           S      + LD+S  + TWG      LG      +  +  PE L +        + +   
Sbjct: 700 STAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSY 759

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGV---SDKVLRPRILDSLRAHHVSQISTGLYHT 329
            + VL + G VY +G     +   P  G+    D++L P  L+SL    V  +S G  H 
Sbjct: 760 YSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLL-PFKLESLS--DVVSVSIGFCHG 816

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             V   G L  +G  E  QLGH      +EP  I
Sbjct: 817 AAVRANGELLTWGVGENGQLGHGDTNNQIEPKII 850


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 22/305 (7%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HAA V + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALVTKQGEVFCWGQGKWGRLGQK-IDMDISSPKIVDSLNGLHVKTVACGEYHTCALT 372

Query: 120 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 176
             G V+T G++      L  G T  +  P+ +  PL+ + S+  +A G  +   V+  G 
Sbjct: 373 DSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGI-SISSVACGEWHTAIVSSCGR 431

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 225
           ++++G G+   LGHG+      P+ +++    G+ V   + G  H  A+           
Sbjct: 432 LFTYGDGTFGVLGHGDLRSYSSPKEVESL--NGLRVRSAACGSWHTAAIVEVMFDRFRYN 489

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            +SG ++TWG G  G LGH D  +K +P  ++ L  +  VQV   +  T  L + G V+ 
Sbjct: 490 SASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFA 549

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
            G   +G LG P     DKV+   +   L+   V  ISTG YH  V+T  G ++ +G  E
Sbjct: 550 MGSAKYGQLGNPH--ARDKVV--IVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGE 605

Query: 346 RAQLG 350
             QLG
Sbjct: 606 IGQLG 610



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  +++S  V++ G+ +C   +L  G   +Q +   R+  P     +  V+  
Sbjct: 361 VACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIP-QRLGGPLDGISISSVACG 419

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 116
           E H A V   G++FT GD +    GH D  R    P+ VE+L G+  +    G   T   
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLNGLRVRSAACGSWHTAAI 478

Query: 117 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
                    + +  G + T G    G+LGH D  ++  P  +  L +    VQ++ G   
Sbjct: 479 VEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDY-DFVQVSCGRML 537

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A+T  G V++ GS     LG+    D++    I   + K   V  +S G  HV  L S
Sbjct: 538 TVALTNMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVKVISTGSYHVAVLTS 594

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 595 AGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALR 627



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 29/344 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAF 64
           G++  L+     VF  G    G LG   +    +S  +I +  +  HV  V+  E H   
Sbjct: 313 GKHAALVTKQGEVFCWGQGKWGRLGQKIDMD--ISSPKIVDSLNGLHVKTVACGEYHTCA 370

Query: 65  VLQSGQVFTCGDNSSFCCG---HRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  SG+V+T G++   CC    +    R  + P RL   L G+    V  G   T  ++ 
Sbjct: 371 LTDSGEVYTWGND--VCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHTAIVSS 428

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--------- 171
            G + T G  T G LGHGD     +PK +  L   G  V+ AA  S+  A          
Sbjct: 429 CGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLN--GLRVRSAACGSWHTAAIVEVMFDRF 486

Query: 172 ---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
              + +G ++++G G    LGH +  +++ P  +          V+VS G    VAL + 
Sbjct: 487 RYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQL--VDYDFVQVSCGRMLTVALTNM 544

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+  G    G LG+    DK +      LK      +        VL   GSVY +G 
Sbjct: 545 GKVFAMGSAKYGQLGNPHARDKVVIVE-GQLKQEFVKVISTGSYHVAVLTSAGSVYTWGR 603

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG  D   ++    P  +++LR   V+ I+ G   T  +
Sbjct: 604 GEIGQLGLGD---TEDRYTPCFVEALRDRQVNTITCGPSFTAAI 644



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 22/277 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +    +  G      +T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 209
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKTVACGEYHTCALTDSGEVYTWGN--DVCCADLLNEGRTRSQWIPQRLGG-PLDG 410

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAAC 470

Query: 270 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
               T  +V+           +G ++ +G    G LG  D G  +K++  R+   L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNG--NKIVPTRVTQ-LVDYD 527

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 21/221 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  IA G  +   VT  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSL--NGLHVKTVAC 363

Query: 218 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 274
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L      +++  V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLNGLRVRSAACGSWHTAAIV 479

Query: 334 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               DR       G+LF +GD +  +LGH      + PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRV 520



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L P+ +++     +H   ++ G +H   +   G V+ WG+G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIV 350

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
            SL       V   +  T  L D+G VY +G     +    +     + +  R+   L  
Sbjct: 351 DSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 20/225 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 49
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + ++  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHT 475

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V    +   +   SG++FT GD      GH D    I  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV-PTRVTQLVDYDFVQVS 532

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V   GS  +GQLG+    D+     I   +     V++ +  SY +
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV---IVEGQLKQEFVKVISTGSYHV 589

Query: 170 AV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           AV T  G VY++G G    LG G+  D   P  ++  R + ++ +
Sbjct: 590 AVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTI 634


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 159/354 (44%), Gaps = 34/354 (9%)

Query: 12  LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + ++++V + GS   G LG G  +  + V       P A   V VS S N  A +   G 
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSV-VSGSRNSLA-ICDDGT 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGH---GDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            +GQ G     D ++RP       PK  AP      V Q+AAG ++ + +T  G V+S+G
Sbjct: 119 EYGQCGEEPGKDEMERPLRRDIVIPKRCAPKL---VVRQVAAGGTHSVVLTREGHVWSWG 175

Query: 182 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 236
                            P  I+      R +G+  VR ++ G  H +AL+ +G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGN 222

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG GD   ++ P P+  L S   V + A    +  L D G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF 282

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 32/309 (10%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  ++L I  + ++F+ G +  G LGH PET      +++   +   +VQ +    H
Sbjct: 43  VVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFR---------PRLVEALKGVPCKQV 108
              V   G+ +  G N    CG      +  RP+ R         P+LV        +QV
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQV 155

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            AG   +  LT  GHV + G         GD      P  +  LE   +V  IA G  + 
Sbjct: 156 AAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISIPVRVQGLE---NVRLIAVGAFHN 208

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LA+  NG ++++G+     LG G+     QP  +Q      + +V ++AG  H  AL   
Sbjct: 209 LALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--DSLTLVDIAAGGWHSTALTDK 266

Query: 229 GYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           G VY WG+G  G LG G  D+  K LP+ ++ L     +QV      +  L   G ++ F
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326

Query: 287 GWMGFGSLG 295
           G    G LG
Sbjct: 327 GRGDHGRLG 335



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           + +S  V  WG G  G LG G   +K     + +L+ +    V +  R +  + D G+++
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLF 60

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +GW   G+LG P    ++ +  P  + +L    + Q + G +H + V D+GR + +G N
Sbjct: 61  TWGWNQRGTLGHPPETKTENI--PSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 345 ERAQLGHDTLRGCLE 359
           E  Q G +  +  +E
Sbjct: 119 EYGQCGEEPGKDEME 133



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +H L L  N ++++ G++  G LG G +T        +    +  +V ++A   H
Sbjct: 201 IAVGAFHNLALEENGTLWAWGNNEYGQLGTG-DTQPRSQPIPVQGLDSLTLVDIAAGGWH 259

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  +   G+V+  G       G  D ++     P+ V  L G    QV+ G   +  LT 
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319

Query: 121 RGHVHTCGSNTHGQLGHGD--TLDRP--TPKSIAPLE 153
            G + + G   HG+LG G   T  +P   P  I P E
Sbjct: 320 DGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPE 356


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  + LAV   G V+++G
Sbjct: 14  GTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKEHSLAVCHKGRVFAWG 72

Query: 182 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           + S   LG GE +     P+ I+T     I +++V+ G  H +AL   G V++WGK   G
Sbjct: 73  AASEGQLGIGELKETTFIPKKIKTL--ADIKIIQVACGHYHSLALSEDGQVFSWGKNSHG 130

Query: 241 ALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LG G E   +  P+ + SL+     QV A    +F L  +G+ +G+G    G L     
Sbjct: 131 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGN 190

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
               +  +P ++ +L+   V  IS G  HT V+T  G++F FGDN   QLGHD+
Sbjct: 191 NAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 22/294 (7%)

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G   +  +
Sbjct: 4   EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCGKEHSLAV 62

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             +G V   G+ + GQLG G+  +    PK I  L ++  ++Q+A G  + LA++ +G V
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADI-KIIQVACGHYHSLALSEDGQV 121

Query: 178 YSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG  + WG 
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLSGTSFGWGS 179

Query: 237 GYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
              G L   G+   + +  P  + +LK+   V +      T VL   G V+ FG   +G 
Sbjct: 180 NNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQ 239

Query: 294 LGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
           LG       RG       P++++ +    VSQI  G YHT+  V   G++  FG
Sbjct: 240 LGHDSTAEKRG-------PQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 9/288 (3%)

Query: 5   TGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENH 61
           +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS  + H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSCGKEH 58

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G+VF  G  S    G  +     F P+ ++ L  +   QV  G   +  L+  
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 122 GHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G  + +
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGTSFGW 177

Query: 181 GSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           GS +   L     +  +Q  + +     K + VV +S G EH   L   G V+T+G    
Sbjct: 178 GSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSY 237

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 238 GQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 49/208 (23%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +  SG  F  G N++        N P+  ++P LV ALK +    ++ G   T  
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDR---------------------------------- 143
           LT  G V T G N++GQLGH  T ++                                  
Sbjct: 223 LTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVV 282

Query: 144 ------------PTPKSIAPLEEVGSVV 159
                       P P+++A   +V  ++
Sbjct: 283 SFGRGPGCTRSSPHPEALAESSDVSCLI 310


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 25/355 (7%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRI-NFPSAAHVVQVSASENHAAFVLQS 68
           L++ + S+  CG++  G LG G    + V S T + +  +   + Q++   +H+  +L  
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF---------L 118
           G VF+CG+N  +  GH    R   +P L E L   +  KQ   G++             L
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKR---KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVAL 127

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAV-TGNG 175
           T  GH+ + GSN +GQLG  + ++         ++E+   ++VQIA G ++ LA+ + +G
Sbjct: 128 TNDGHLFSWGSNVYGQLG-VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           V++++G   +  LG G +   + P  +   +  GI + +++AG  H + L  SG V+ WG
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVN--KLMGIPICQLAAGASHSLVLTPSGTVFGWG 244

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           K   G +G  ++ D   P  +  L++   +++   +  +  +  TG ++ FG   +G LG
Sbjct: 245 KNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLG 304

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G  +  L P+ +  L    V  ++ G  HT+ +T+  +L+ FG N   QLG
Sbjct: 305 ---HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE-NKLYAFGLNTSGQLG 355



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 16/306 (5%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-------SAAHVV 53
           QI  GR+H+ +L+ + SVFSCG++    LGH     +   +  +++           HV+
Sbjct: 56  QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVI 115

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAG 111
            V+  + H   +   G +F+ G N     G    N       PR+ E +      Q+  G
Sbjct: 116 SVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQE-INLANIVQIACG 174

Query: 112 LNFTGFL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            N +  L +  G +H  G N HGQLG G       P ++  L  +  + Q+AAG S+ L 
Sbjct: 175 SNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGI-PICQLAAGASHSLV 233

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +G V+ +G      +G  EQ D L P  ++  R +   V+R++ G++  VA+ ++G 
Sbjct: 234 LTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQ--KVIRLACGEDFSVAVTATGG 291

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           ++T+G G  G LGHG++  +  P+ +  L   + + V   +  T  + +   +Y FG   
Sbjct: 292 LFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE-NKLYAFGLNT 350

Query: 291 FGSLGF 296
            G LG 
Sbjct: 351 SGQLGL 356



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 16/261 (6%)

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV---QIAAGPSYMLAVTGNGVVYSFGSG 183
           CG+ + GQLG G   +    +S+  +E   + +   QIA G  + + +  +G V+S G+ 
Sbjct: 21  CGNTSDGQLGLGGIAEENV-RSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNN 79

Query: 184 SNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
             + LGH         ++ L           GIHV+ V+ GD H VAL + G++++WG  
Sbjct: 80  DFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSN 139

Query: 238 YCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 294
             G LG    + + K     +  +     VQ+      +  L  T G ++ +G    G L
Sbjct: 140 VYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQL 199

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G  +  + P  ++ L    + Q++ G  H++V+T  G +FG+G N   Q+G +  
Sbjct: 200 GI---GTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQ 256

Query: 355 RGCLEPTEIFIQEMEEDTGLA 375
           R  L P+ + +   ++   LA
Sbjct: 257 RDILYPSLVKLLRTQKVIRLA 277


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 16/319 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +F+ G ++ G LG G     C+   T ++  +   +  +S   NH   +LQ GQ+++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQL 135
           N     G +  N+   R   ++A + +    V++ G N    +  +  ++  G N+ GQL
Sbjct: 61  NDYGQTGRQRNNKRFAR---IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 136 GHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           G  D   +    TP+ I  L +  +VVQ+A G S+ LAV  +G V+S+GS     LG   
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKF-AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
               ++P+  Q  +  G ++V+++AG  H +A+ +SG + TWGK   G LG G       
Sbjct: 177 NVSSVEPK--QILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLS 234

Query: 253 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           P  +SSL+S H+A   C     T VL   G V+ FG    G LG     +S     P+++
Sbjct: 235 PTCVSSLRSQHIAYAACGEDH-TAVLTKEGGVFTFGAGSSGQLG--HNSLSHHC-SPQMV 290

Query: 312 DSLRAHHVSQISTGLYHTV 330
             L    V+QI+ G ++ +
Sbjct: 291 VDLMGIVVTQITCGRFYAL 309



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 10/252 (3%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           K ++ GLN T  L   G +++CGSN +GQ G      R     I   E +      + G 
Sbjct: 37  KLISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRFA--RIDAFESMRITNVSSNGA 94

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHV 222
           ++ LA+     +Y++G  S+  LG  +Q+ +     PR I++  +    VV+V+ G  H 
Sbjct: 95  NHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSK--FAVVQVACGQSHS 152

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +A+ + G V++WG    G LG    +    P+ +  L     VQ+ A    +  + ++G+
Sbjct: 153 LAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGA 212

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +  +G   FG LG    G +D VL P  + SLR+ H++  + G  HT V+T  G +F FG
Sbjct: 213 LLTWGKNSFGQLGL---GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFG 269

Query: 343 DNERAQLGHDTL 354
                QLGH++L
Sbjct: 270 AGSSGQLGHNSL 281



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 11/273 (4%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-EN 60
           I+ G  HT LL+ +  ++SCGS+  G  G      +   F RI+   +  +  VS++  N
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKR---FARIDAFESMRITNVSSNGAN 95

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   +     ++  GDNS    G  D N   F   PR +++L      QV  G + +  +
Sbjct: 96  HNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAV 155

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + GSN +GQLG    +    PK I  L     +VQIAAG ++ LA+T +G + 
Sbjct: 156 INDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALL 214

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S   LG G     L P  + + R +  H+   + G++H   L   G V+T+G G 
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--HIAYAACGEDHTAVLTKEGGVFTFGAGS 272

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 270
            G LGH        P+ +  L   +  Q+ C R
Sbjct: 273 SGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGR 305



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 10/238 (4%)

Query: 128 GSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           G    GQLG G   +    K+    L    ++  I+ G ++ + +  +G +YS   GSN 
Sbjct: 5   GKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYS--CGSND 62

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
               G Q +  +   I  F    I  V  S G  H +A++    +Y WG    G LG  D
Sbjct: 63  YGQTGRQRNNKRFARIDAFESMRITNVS-SNGANHNLAINDKNCIYAWGDNSDGQLGVTD 121

Query: 247 EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           +  K     P  + SL     VQV   +  +  +++ G+V+ +G   +G LG  D  VS 
Sbjct: 122 QNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGI-DSNVSS 180

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             + P+ +  L   ++ QI+ G  H++ +T+ G L  +G N   QLG  T  G L PT
Sbjct: 181 --VEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLSPT 236



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)

Query: 211 HVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           H ++ +S G  H + L   G +Y+ G    G  G   + +      + + +S     V +
Sbjct: 34  HTIKLISCGLNHTILLLQDGQIYSCGSNDYGQTGR--QRNNKRFARIDAFESMRITNVSS 91

Query: 270 R-KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                   + D   +Y +G    G LG  D+ +      PR + SL    V Q++ G  H
Sbjct: 92  NGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSH 151

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           ++ V + G +F +G N   QLG D+    +EP +I 
Sbjct: 152 SLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQIL 187


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 14/278 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS--RKKPEHVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 209
            L+    +V ++ G S+ LA+   G V+S+G GSN  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 266
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           + A    +F +  +G+V+G+G   FG LG  D    D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGKNKFGQLGLND--TKDRWF-PALLKSLRSQRVIFVSCGE 251

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            HT  +T    +F FG     QLGH+     + P ++F
Sbjct: 252 DHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVF 289



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 11/285 (3%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           +  F     V  V     H  F+L  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRK---KPEHVVALDA 83

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 161
                V+ G + T  L  +G V + G  ++GQLG  +  +    P++I  L +V  + Q+
Sbjct: 84  QIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDV-QIAQV 142

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 220
           A G  +  A++  G V+S+G      LG G     +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSL--QGIPFAQLSAGGA 200

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H  A+  SG V+ WGK   G LG  D  D+  P  L SL+S   + V   +  T  L   
Sbjct: 201 HSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKL 260

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             V+ FG  G+G LG      ++  + PR +  L  + V+QIS G
Sbjct: 261 RGVFTFGAGGYGQLG---HNCTNHEINPRKVFELMGNVVTQISCG 302



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 13/272 (4%)

Query: 6   GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKPEHVVALD---AQIIVAVSCGESHTLA 98

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +   GQVF+ G  S+   G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQV 158

Query: 125 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG  +  D   P  +++ R +   V+ VS G++H  AL     V+T+G G  G 
Sbjct: 216 KNKFGQLGLNDTKDRWFPALLKSLRSQ--RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQ 273

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKR 272
           LGH     +  P  +  L  ++  Q+ C   R
Sbjct: 274 LGHNCTNHEINPRKVFELMGNVVTQISCGSTR 305


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    +Q++  E     V   G++F  G
Sbjct: 4199 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATG 4257

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4258 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4317 KLGHGNRMSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4375

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4376 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4435

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4436 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4492

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4493 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4539



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLLEHLNGMSVADIACG 4346

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4407 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4464

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4524

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4525 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 71
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3096 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 72   FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3154 FSWGEGEDGKLGH--GNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3211

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 188
             +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3212 EYGRLGHGDNATQLKPKLVTALHG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3270

Query: 189  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3271 GRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3328

Query: 249  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
                P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 3329 HVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 3385

Query: 309  RILDSLRAHHVSQISTGLYHTVV 331
             ++  L A  V++++ G  H++ 
Sbjct: 3386 ALVIGLDAVFVNRVACGSSHSMA 3408



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 65   VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 121
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3093 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3150

Query: 122  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3151 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3207

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 237
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3208 WGLGEYGRLGHGDNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
              G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3323

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3324 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3375



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
            G++   L  +  VFS G    G LGHG  +T  +   R +    A  +  ++   +H+A 
Sbjct: 3141 GKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAA 3198

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 122
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDG 3257

Query: 123  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3258 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3316

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3374

Query: 243  GHGDEIDKTLP 253
            G G+      P
Sbjct: 3375 GSGNTFVNKKP 3385



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 22/314 (7%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            + QV+ SE+    + Q G+++           +    +P   P+L++  +      V+ 
Sbjct: 572 QLKQVACSEDMVVLLCQEGKLY-----------NWPIAKPETEPQLLDFAEIANETFVSI 620

Query: 111 GLNFTG--FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
             +  G  FL +  +   ++ G     +LGHGD   R  P  I  L  V  V  +  G S
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCS 678

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           Y  A+T  G +Y++G G+   LGHG   D+  P  +   +   +  V + +GD H + L 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G VY WG G  G LG+G       P  +  L      +V A  + +  L   G +Y +
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR--VQRVFAGSQFSLALTCEGQLYSW 796

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+ 
Sbjct: 797 GKASCLGHQLVERNVQGCSV-PRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDN 855

Query: 347 AQLGHDTLRGCLEP 360
            Q+   ++  C EP
Sbjct: 856 QQICPASV--CSEP 867



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  ++  
Sbjct: 4291 VNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLLEHLNGMSVADIACG 4346

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4405

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 4464

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYTWG 
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYTWGD 4522

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 4523 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVYAC 3102

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3222

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3223 TQ---LKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3279

Query: 359  EPTEI 363
             P EI
Sbjct: 3280 TPHEI 3284



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  +    Q+A G   
Sbjct: 4192 ALSWGGASTIYGW----GHNHRGQLGGLEGSRIKTPTPCEALSLLRPI----QLAGGEQS 4243

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4244 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4303

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4364 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4420

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LG     GC  P +I
Sbjct: 4421 YGKLGRGGSDGCKLPYKI 4438



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 26/242 (10%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 60
           GR+   + SN + +S G      LGHG        T+  S  R        V  V    +
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-------RVQSVYCGCS 678

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 118
           ++A +   G ++T G  +    GH +++     P +V ALK      V   +G   T  L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM-PAMVMALKDHQVLDVALGSGDAHTLCL 737

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V+  G   +G+LG+G       P  I  L  V  V    AG  + LA+T  G +Y
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVF---AGSQFSLALTCEGQLY 794

Query: 179 SFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           S+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G ++ W
Sbjct: 795 SWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVHVAVGVAHCLALSSNGEIFGW 850

Query: 235 GK 236
           G+
Sbjct: 851 GR 852



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 66
           Y   +    ++++ G    G LGHG    QC+    +       + V + + + H   + 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           + G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTCEGQLYS 795

Query: 127 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ NG ++ +G
Sbjct: 796 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVHVAVGVAHCLALSSNGEIFGWG 851

Query: 182 SGSN 185
              N
Sbjct: 852 RNDN 855



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D+  ++   +  +Y WG  + G LG  +      P P  +L     +Q+   ++  F + 
Sbjct: 4189 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVT 4248

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4249 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4305

Query: 337  RLFGFGDNERAQLGH 351
             ++ +G+ E  +LGH
Sbjct: 4306 EVYAWGEGEDGKLGH 4320


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 147/323 (45%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + V  G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYVACG 303

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G   +  G LGHG       PK ++ PLE V  V+ ++ G  + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGV-QVLSVSCGSWHS 362

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
              T +G V++FG G+   LGHG +H    P+ ++T    G   ++V+ G  H  A+   
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETL--SGFRTIKVACGLWHSAAIVET 420

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  ++TWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALS 480

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 481 TSGHVFTMGSSSNGQLGNPK---SDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEV 537

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +    +PT
Sbjct: 538 YTWGMGANGRLGHGGVEDKKKPT 560



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 20/291 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  I+ S  +++ G      G+LGHG  T+  +   R++ P     V+ VS  
Sbjct: 300 VACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLP-KRVSGPLEGVQVLSVSCG 358

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 112
             H+A    SG+VFT GD +    GH + +   + P+ VE L G    +V  GL      
Sbjct: 359 SWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAY-PKEVETLSGFRTIKVACGLWHSAAI 417

Query: 113 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               N  G   I   + T G+     LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 418 VETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY-NFHQVACGHSMT 476

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A++ +G V++ GS SN  LG+  + D   P  +Q  R  G  V  +S G  HV  L S 
Sbjct: 477 IALSTSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQD-RLAGELVEEISCGSCHVAVLTSR 534

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 278
             VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 535 SEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICI 585



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 17/285 (5%)

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 221 SANYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 276

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 194
           HG   D   PK +  L  V +V  +A G  +  A+T +G +Y++G G  +   LGHG   
Sbjct: 277 HGTDADISRPKLVEAL-AVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGT 335

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG+      P+
Sbjct: 336 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPK 394

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 306
            + +L     ++V      +  +V+T +  G        F W G G       G  D  L
Sbjct: 395 EVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTW-GAGDKNPLGHGDKDARL 453

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            P  + SL  ++  Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 454 VPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 498



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 151/353 (42%), Gaps = 36/353 (10%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
            QI  G  H  L +    VF+ G  L G LGHG       P+  + ++ + + +      
Sbjct: 246 QQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEY------ 299

Query: 53  VQVSASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
             V+  E H   +  SG ++T GD   ++   GH          R+   L+GV    V+ 
Sbjct: 300 --VACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSC 357

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +   T  G V T G  T G LGHG+      PK +  L      +++A G  +  A
Sbjct: 358 GSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGF-RTIKVACGLWHSAA 416

Query: 171 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +       G  V+    +++G+G    LGHG++   L P  +Q+      H  +V+ G  
Sbjct: 417 IVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH--QVACGHS 474

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVD 279
             +AL +SG+V+T G    G LG+  + D   P P+   L   L  ++        VL  
Sbjct: 475 MTIALSTSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTS 533

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              VY +G    G LG    GV DK  +P ++++L+  HV  I+ G   T  +
Sbjct: 534 RSEVYTWGMGANGRLGHG--GVEDKK-KPTLVEALKDRHVKSIACGSNFTTCI 583



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       ++ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 256

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+ WG+   G LGHG + D + P+ + +L       V   +  T  +  +G +
Sbjct: 257 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITASGDL 316

Query: 284 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y +G  G+ + G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 317 YTWG-DGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 375

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 376 DGTFGALGHGNRHTVAYPKEV 396


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  119 bits (297), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 110/377 (29%), Positives = 174/377 (46%), Gaps = 25/377 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 119
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G N +G+LG+G T+ + +P  +A L +V +   IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTA---IAAGGYYSLALKSDGTVWA 207

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGL----TDVMAIAAGGSHSLAIKQDGTVWAWGNNTY 263

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSN 321

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 356
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   Q+G   ++  RG
Sbjct: 322 ASS---LIPVPVPGI--EHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376

Query: 357 CLEPTEIFIQEMEEDTG 373
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 18/311 (5%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            + ++    H A V + G+VFT G+ +    GH      + RP+LVE L       V  G 
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGH-GIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 113  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTMKVACGVWHTVAIVEVMN 1260

Query: 226  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1261 QTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTS 1320

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1321 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1377

Query: 341  FGDNERAQLGH 351
            +G     +LGH
Sbjct: 1378 WGKGSNGRLGH 1388



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 20/282 (7%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1196

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 111
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1197 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTMKVACGVWHTVAI 1255

Query: 112  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               +N TG       + T G     +LGHG+      P  ++ L +  +  QIA G +  
Sbjct: 1256 VEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFQQIACGHTLT 1314

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1372

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCA 269
              V+TWGKG  G LGHGD+ D+  P  + +LK  H+    CA
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 58/207 (28%)

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            + IA G  ++  VT  G V+++G  +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFV--ACG 1141

Query: 219  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S                   
Sbjct: 1142 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVS------------------- 1182

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
                G V G                                 V  ++ G +H+ + T  G
Sbjct: 1183 ----GPVEGL-------------------------------QVLSVACGTWHSALATANG 1207

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +LF FGD     LGH        P E+
Sbjct: 1208 KLFTFGDGAFGVLGHGDRESVSYPKEV 1234


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 154/325 (47%), Gaps = 19/325 (5%)

Query: 46  FPSAAHVV---QVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 101
           +P++A V+    VSA  +H+  +     V+  GDN++   G    T R    P      +
Sbjct: 63  YPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA-----Q 117

Query: 102 GVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           G+P   QV+AG + +  LT  G V   G N+ GQLG G T D  TP  +  L    ++  
Sbjct: 118 GLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKV 177

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +AAG ++ LA+T +G V+++G  S+  LG+    D   P  +Q       +V  V+AG  
Sbjct: 178 VAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA---NVTAVAAGGN 234

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVD 279
           H +AL S G +Y WG    G LG G   + + P  ++ L +    V V A K  +  L+ 
Sbjct: 235 HSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQ 294

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+VY +G   +G LG    G +     P  +  L   +V+ +S G   ++ +T  G ++
Sbjct: 295 DGTVYAWGGNSYGQLG---NGTTTASEMPVQVTGL--ANVTAVSAGGSDSLALTSDGYVY 349

Query: 340 GFGDNERAQLGHDTLRGCLEPTEIF 364
            +G N   QLG  T      P  +F
Sbjct: 350 AWGLNSSGQLGDGTTSNRNTPVRVF 374



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 138/297 (46%), Gaps = 15/297 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  H+L L S+ +V++ G +  G LG G  T +         PS   V QVSA E+H
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS---VAQVSAGESH 131

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +  +   G+VF  G NSS   G     D+  P+    L         K V AG N +  L
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST---IKVVAAGGNHSLAL 188

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G N+ GQLG+  T+D   P  +  L    +V  +AAG ++ LA+T +G +Y
Sbjct: 189 TSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLP--ANVTAVAAGGNHSLALTSDGRIY 246

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S+  LG G   +   P  +      G   V VSAG +H +AL   G VY WG   
Sbjct: 247 AWGLNSSGQLGDGTTSNSSTPVLVAGL-PAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG+G      +P  ++ L +  A  V A    +  L   G VY +G    G LG
Sbjct: 306 YGQLGNGTTTASEMPVQVTGLANVTA--VSAGGSDSLALTSDGYVYAWGLNSSGQLG 360



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 17/258 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q++ G  H+L L  +  VF+ G +  G LG G               + + +  V+A  N
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCK--QVTAGLNFT 115
           H+  +   G+VF  G NSS   G+    D++ P+        ++G+P     V AG N +
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-------QVQGLPANVTAVAAGGNHS 236

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  G ++  G N+ GQLG G T +  TP  +A L      V ++AG  + LA+  +G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VY++G  S   LG+G       P  +        +V  VSAG    +AL S GYVY WG
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLA----NVTAVSAGGSDSLALTSDGYVYAWG 352

Query: 236 KGYCGALGHGDEIDKTLP 253
               G LG G   ++  P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 7/174 (4%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L L S+  +++ G +  G LG G  +           P+ +  V VSA ++H
Sbjct: 229 VAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDH 288

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  ++Q G V+  G NS    G+  T      P  V  L  V    V+AG + +  LT  
Sbjct: 289 SLALMQDGTVYAWGGNSYGQLGNGTTTASEM-PVQVTGLANVTA--VSAGGSDSLALTSD 345

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAVT 172
           G+V+  G N+ GQLG G T +R TP  +  +   G++   +Q++ G S  +A++
Sbjct: 346 GYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALS 399


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     + AG 
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDIAAGG 4113

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4114 AHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4172

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4173 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVTKVECGSQFSVALTKSGA 4230

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4291 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4100

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L     VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4101 LRGT-EVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGS 4219

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4220 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4277 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 10/276 (3%)

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 130  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 248  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 306  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
              P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3198 NIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V QV+ +E     + ++G+++T   N++              P+LV+ L      ++ A 
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN-----------TLGPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +     + + G    G+LGHGDT+    PK ++ L  ++ G  V+ IA G +
Sbjct: 502 PDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV VS  +GD   ++
Sbjct: 562 YSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGL--KGLKVVDVSCGSGDAQTLS 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  +   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P+I++ L+   V  ++ G  H + +T+ G ++ +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 162
            ++ TAGL  T   TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2949 RKKTAGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 3002

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 221
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  +  +G
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 339
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 340  GFGDNERAQLGHDTLRGCLEPTEI 363
             +GD +  +LG     GC  P  I
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNI 3203



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A   H
Sbjct: 4057 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDIAAGGAH 4115

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A +  +G+++T G       GH D+   + +P+LVEAL+G     +   +G   T  LT
Sbjct: 4116 SACITAAGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQTLCLT 4174

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  VG V ++  G  + +A+T +G VY+
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTKVECGSQFSVALTKSGAVYT 4233

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4234 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4291

Query: 240  GALGHG 245
            G LG G
Sbjct: 4292 GQLGDG 4297



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 32/294 (10%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVSAS 58
           G+++  L + S +FS G    G LGHG      VS       SA         V+ ++  
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHG----DTVSLEEPKLVSALSGKQTGKQVIHIACG 559

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G      L
Sbjct: 560 STYSAAITADGELYTWGRGNYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 119 TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           ++   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +G 
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIAITKDGQ 677

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS+G G N  LGHG +     P+ +     +G  VV V+ G  H +AL  SG VY+WG 
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKIMNGL--QGKKVVDVAVGSTHCLALTESGEVYSWGS 735

Query: 237 GYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
                  H D   I K +P  L  L S           K  V +  G    F W
Sbjct: 736 N--DQCQHFDTLRIAKPVPSVLPGLDS-----------KHIVGISCGPAQSFAW 776



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4020

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLG--- 4137

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4197

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4198 CKVPMKI 4204



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 11/245 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSG 3228

Query: 282  SVYGF 286
             V+ +
Sbjct: 3229 VVWTW 3233



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 23/220 (10%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V Q+A      L ++ NG +Y+    +N           L P+ +Q    + I  +    
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN----------TLGPQLVQGLASRNIVKIAAHP 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQV----CARKR 272
             +H +AL ++  +++WG G  G LGHGD +    P+ +S+L       QV    C    
Sbjct: 503 DGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTY 562

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 330
              +  D G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+
Sbjct: 563 SAAITAD-GELYTWGRGNYGRLG---HGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V + G    G+LG G +     P++I  L    +V QI  G  + LA+T +GVV+++
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-QAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 220
            P   L      +        N   GH E HD    E   + +Q   R+          D+
Sbjct: 3907 PRQFLDEVAKKIRELMADNENMNAGH-ESHDTFKREQDEQLVQWMNRRP---------DD 3956

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3957 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4016

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 4017 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 339  FGFGDNERAQLGHDTLRGCLEPTEI 363
            + +G+ E  +LGH     C  P  I
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVI 4098



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVTKVECGSQFSV 4223

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4224 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4282

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4328



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 612 SGDAQTLSVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+++  L+G     V  G      LT  G 
Sbjct: 671 AITKDGQVYSWGKGDNQRLGH-GTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGE 729

Query: 124 VHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           V++ GSN   Q  H DTL   +P P S+ P  +   +V I+ GP+   A
Sbjct: 730 VYSWGSNDQCQ--HFDTLRIAKPVP-SVLPGLDSKHIVGISCGPAQSFA 775


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 160/369 (43%), Gaps = 29/369 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSAS 58
           Q   G  H++ + S   V+S G +  G LG G   ++ Q +    +N      ++Q + S
Sbjct: 161 QALAGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLN---GIRIIQAAIS 217

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNF 114
            +    +  +G+V+  G     C        P    I  P+ V++L  +   Q   G  F
Sbjct: 218 TDRTFVISDAGEVYAFG---KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYF 274

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 171
           T  L+  G V+T       +LGH        P+ +    E   VVQIAAG  Y+LA+   
Sbjct: 275 TAILSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQ 334

Query: 172 -TGNGV--VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            TG  V  V     G            E  PR I+ F    I  V VSAG  H   +   
Sbjct: 335 PTGMSVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKD 394

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V TWG G  G LGHG E  +  P+ +  LK   AV V      TFV+ D G VY FG 
Sbjct: 395 GRVCTWGWGRFGCLGHGTEEAENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFG- 453

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSL-----RAHHVSQIST--GLYHTVVVTDRGRLFGF 341
            G  +LG  D  V +  L P+++ SL     R  HVS  ++  G  HT  +T+ G L+ F
Sbjct: 454 SGGANLGQDD--VDENTLTPKLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAF 511

Query: 342 GDNERAQLG 350
           G   R QLG
Sbjct: 512 GAGNRGQLG 520



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 9/152 (5%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG  H +A+ S G VY++G    G LG G   D   P P+ SL     +Q      +TFV
Sbjct: 164 AGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFV 223

Query: 277 LVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
           + D G VY FG + F    L  P+  +   +  P+ + SL    V Q + G Y T +++ 
Sbjct: 224 ISDAGEVYAFGKVCFSEAKLEVPETKL---ITTPQRVKSLAEIFVVQAAIGNYFTAILSR 280

Query: 335 RGRLF--GFGDNERAQLGHDTLRGCLEPTEIF 364
            GR++   +G++ER  LGH T   C  P  + 
Sbjct: 281 EGRVYTLSWGNDER--LGHQTDHSCSLPQPLL 310



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 112/259 (43%), Gaps = 19/259 (7%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           Q  AG   +  +T +G V++ G N  GQLG G T D   P  +  L  +  ++Q A    
Sbjct: 161 QALAGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGI-RIIQAAISTD 219

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHV 222
               ++  G VY+FG     C     + +  + + I T +R      I VV+ + G+   
Sbjct: 220 RTFVISDAGEVYAFG---KVCFSEA-KLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFT 275

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLV--D 279
             L   G VYT   G    LGH  +   +LP+PL  +L++   VQ+ A       L    
Sbjct: 276 AILSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQP 335

Query: 280 TG-SVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTD 334
           TG SVY  G    G LG    D   S+K   PR++      ++    +S G +H  VV  
Sbjct: 336 TGMSVYSVGCGLGGKLGHGLSDSDASEKY--PRLIKKFGLLNIEPVMVSAGPWHAAVVGK 393

Query: 335 RGRLFGFGDNERAQLGHDT 353
            GR+  +G      LGH T
Sbjct: 394 DGRVCTWGWGRFGCLGHGT 412


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 151/323 (46%), Gaps = 16/323 (4%)

Query: 15   NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 71
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940

Query: 72   FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 1941 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 1998

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 188
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 1999 EYGRLGHGDNATQLKPKLVAALAG-RRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKL 2057

Query: 189  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 2058 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 2115

Query: 249  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
                P+P+  L+    + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 2116 HVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 2172

Query: 309  RILDSLRAHHVSQISTGLYHTVV 331
             ++  L A  V++++ G  H++ 
Sbjct: 2173 ALVIGLDAVFVNRVACGSSHSIA 2195



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 8/347 (2%)

Query: 16   SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 2977 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 3035

Query: 76   DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 3036 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 3094

Query: 134  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 3095 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 3153

Query: 194  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 3154 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 3213

Query: 254  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
              + SL     ++V    + +  L  +G+VY +    F  LG    G  D V RP+ + +
Sbjct: 3214 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLG---HGSVDHVRRPKKVAA 3270

Query: 314  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 3271 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 3317



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 3124

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 3185 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 3242

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTW KG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 3243 VYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 3302

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 3303 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 1879 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 1993

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 1994 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2110

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2111 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2162



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQVSASENH 61
            G++   L  +  VFS G    G LGHG  TT    + V   R     +  +  V+   +H
Sbjct: 1928 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLR-----SKKIRDVACGSSH 1982

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLT 119
            +A +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT
Sbjct: 1983 SAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVIQVACGSRDAQTLALT 2041

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V++
Sbjct: 2042 EDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWT 2100

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    
Sbjct: 2101 WGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 2158

Query: 240  GALGHGDEIDKTLP 253
            G  G G+      P
Sbjct: 2159 GQQGSGNTFVNKKP 2172



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 1889

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 2009

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2010 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSD 2066

Query: 359  EPTEI 363
             P EI
Sbjct: 2067 TPHEI 2071



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 14/281 (4%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
            + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  ++  
Sbjct: 3069 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADIACG 3124

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G      L
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDAQTL 3183

Query: 119  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T +G 
Sbjct: 3184 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGA 3242

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++  G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYTWG 
Sbjct: 3243 VYTWSKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 3300

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
               G LG G       P  +++L+    V+V      T  L
Sbjct: 3301 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 19/294 (6%)

Query: 76   DNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
            + SS    H D    +F+ P   + L+ +  +     L++ G  TI G     G N  GQ
Sbjct: 2936 EASSLVLLHEDHT--LFQAPHDAQLLQWLNRRPDDWALSWGGASTIYG----WGHNHRGQ 2989

Query: 135  LG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
            LG   G  +  PTP ++++ L  V    Q+A G   + AVT +G +++ G GS   LG G
Sbjct: 2990 LGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVG 3045

Query: 192  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
                   P  + + +   +  V V++G +H +AL + G VY WG+G  G LGHG+ +   
Sbjct: 3046 GADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD 3105

Query: 252  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
             P+ +  L       +      +  +  +G V  +G   +G LG  D   S+  LRP+++
Sbjct: 3106 RPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---SEDQLRPQLV 3162

Query: 312  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +I
Sbjct: 3163 EALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 3216


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 20/297 (6%)

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFT 115
           AF  QS  V+T G+ +    GH    +   R       P+L+EA +G     V  G + +
Sbjct: 37  AFSTQS-SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHS 95

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
             +   G ++  GSN + +LG G++ +  T P+ +  L+ V  +V ++ G  +  AV  +
Sbjct: 96  AAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGV-KIVDVSCGDYFTAAVDAD 154

Query: 175 GVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           G +YS+G G +       LGH    DE  PR + T   +G+ ++ V  G+ H VAL   G
Sbjct: 155 GKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDG 214

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G  
Sbjct: 215 EIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGN 274

Query: 290 GFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
               LG    G++  V      P ++++     V QI+ G  H   VTD GRL+ +G
Sbjct: 275 SQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 37/370 (10%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCV--SFTRIN------FPSAAHVVQVSASENHAAFV 65
           + SSV++ G+   G LGHGP     +  ++  +       F   A +  V    +H+A +
Sbjct: 40  TQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKA-ITHVEFGASHSAAI 98

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
            + G+++  G N     G  +++     PR VEALKGV    V+ G  FT  +   G ++
Sbjct: 99  DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMY 158

Query: 126 TCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 179
           + G         G LGH    D PTP+ +  L + G  ++ +  G  + +A++ +G +++
Sbjct: 159 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWA 218

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+G    LG+GE      P  I+ F +   +VV ++AG +   AL  +G +Y+WG    
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDNGELYSWGGNSQ 276

Query: 240 GALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
             LG G  +       +++P  + +       Q+ A       + D G +Y +G      
Sbjct: 277 NQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG------ 330

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
                   S   + P  + ++  + + Q++ G  +TV +++ G +F FG      LGH  
Sbjct: 331 --------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHGD 382

Query: 354 LRGCLEPTEI 363
            +  L+P +I
Sbjct: 383 RKNQLQPVQI 392



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G +HT+ +S +  +++ G+   G LG+G E+  C     I F S  +VV ++A  
Sbjct: 198 LTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           + +  +  +G++++ G NS    G       D       P LVEA  G+  KQ+ AG + 
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
              +T  G ++  GS    +           P  +  + E   +VQ+A G  Y +A++ N
Sbjct: 317 AAAVTDDGRLYMWGSKIWIE-----------PHEMTAVNEY-KMVQVACGRQYTVALSEN 364

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           G V++FG GS+ CLGHG++ ++LQP  I+      +++  +S GD H+ A+
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQPVQIEALAD--VNITSISCGDYHMGAI 413



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 40/341 (11%)

Query: 6   GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 63
           G  H+  I  +  ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 91  GASHSAAIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTA 149

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 117
            V   G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 150 AVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVA 209

Query: 118 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           L+  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T NG
Sbjct: 210 LSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDNG 266

Query: 176 VVYSFGSGSNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 267 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLSVKQIAAGYDHAAAVTDDG 324

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            +Y WG              K   EP  ++++  +  VQV   ++ T  L + G V+ FG
Sbjct: 325 RLYMWGS-------------KIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFG 371

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                 LG  DR      L+P  +++L   +++ IS G YH
Sbjct: 372 KGSSNCLGHGDR---KNQLQPVQIEALADVNITSISCGDYH 409



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 177 VYSFGSGSNFCLGHG--------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           VY++G+G+   LGHG          ++EL P+ ++ F  K I    V  G  H  A+D  
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI--THVEFGASHSAAIDED 101

Query: 229 GYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G +Y WG      LG G+  + +TLP  + +LK    V V      T  +   G +Y +G
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161

Query: 288 WMG--FGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGD 343
           W G      G            PR+L +L    V    +  G +HTV ++  G ++ +G+
Sbjct: 162 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGN 221

Query: 344 NERAQLGHDTLRGCL--EPTEIFIQE 367
            E  +LG+     C   EP E F ++
Sbjct: 222 GEYGRLGNGESDTCEVPEPIEFFSKD 247


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 161/369 (43%), Gaps = 34/369 (9%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S +SV + GS   G LG G  E  +  S      P     V V  S N  A +   G+
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSV-VGGSRNSLA-ICDDGK 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGHGDTLD---RPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            +GQ G   + D   RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAPQL---TVRQVAAGGTHSVVLTREGYVWTWG 175

Query: 182 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 236
                            P  I+      R +G+  VR ++ G  H +AL   G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGN 222

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 357 CLEPTEIFI 365
             +P E+ I
Sbjct: 342 TGQPLELPI 350


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 11/317 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            SA   VQ+   E     V   G+V+  G  +    G   T+  I  P L+E+++ +  K+
Sbjct: 3999 SALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDT-ILTPTLLESIQHIFIKK 4057

Query: 108  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L+    +V IA G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQG-KEIVDIACGG 4116

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVV 223
            ++  AVT  G +Y++G G    LGHG+  D+++P+ ++T    G  V+ ++  +GD   +
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACGSGDAQTL 4174

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
             +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +GSV
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSV 4234

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
            Y +G   +  LG    G  + V  P+ + +L+   +  I+TG  H V  +D G +F +GD
Sbjct: 4235 YTWGKGDYHRLG---HGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGD 4291

Query: 344  NERAQLGHDTLRGCLEP 360
            N+  QLG  T+     P
Sbjct: 4292 NDEGQLGDGTMNAIHRP 4308



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 10/327 (3%)

Query: 39   VSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 97
            VSF   ++     V  +S + +H+     S  +VF  G N     G    ++ +  P   
Sbjct: 2954 VSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSK-VKVPVYS 3012

Query: 98   EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VG 156
            E+L  +    +  G      ++  G ++ CG  T+G+LG G + +  TP  +  L + V 
Sbjct: 3013 ESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVI 3072

Query: 157  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
              V + +G  + +A+T +G V+S+G G +  LGH  +    +P+ I+  + K I    ++
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--DIA 3130

Query: 217  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKT 274
             G  H  A+ S+G ++TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T
Sbjct: 3131 CGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQT 3190

Query: 275  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
              L   G V+ +G   FG LG   RG S+    P  ++ L    V  I  G   ++ +T 
Sbjct: 3191 LALSAEGLVFSWGDGDFGKLG---RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTK 3247

Query: 335  RGRLFGFGDNERAQLGHDTLRGCLEPT 361
             G+++ +G  +  +LGH + +   +PT
Sbjct: 3248 FGQVYTWGKGDYFRLGHGSDQHVRKPT 3274



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 15/323 (4%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            +A   + ++        V   G+++ CG+  N     GH +    +  P  + +L     
Sbjct: 3016 TALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNN---VATPCQLTSLNQYVI 3072

Query: 106  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            K+V   +G      LT+ G V + G    G+LGH + L    PK I  L+    +  IA 
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKS-KRIRDIAC 3131

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
            G S+  A++  G ++++G G    LGHG+   +L+P+ ++     G H+V+V+ G  D  
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL--GHHIVQVACGSRDAQ 3189

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
             +AL + G V++WG G  G LG G      +P  +  L       +    + +  L   G
Sbjct: 3190 TLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFG 3249

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY +G   +  LG    G    V +P +++SL    +  ++ G  H +  TD+G+++ +
Sbjct: 3250 QVYTWGKGDYFRLG---HGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAW 3306

Query: 342  GDNERAQLGHDTLRGCLEPTEIF 364
            GDN+  Q G+ T+    +P+ + 
Sbjct: 3307 GDNDHGQQGNGTILVNRKPSLVL 3329



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 27/341 (7%)

Query: 24  SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 83
           S C  LG  P++  C S   +       V Q+  +E     +  +G+V+    +S   C 
Sbjct: 459 SSCHDLGTSPQS--CDSIRELG------VKQIVCAERWLLILTLTGKVYIMYYSSETQC- 509

Query: 84  HRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTL 141
                     P  +E   G    ++ A  +   +  L+  G V++ G+   G+LGHGD  
Sbjct: 510 ----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNN 559

Query: 142 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
            R  P  I  L  VG +V+ I+ G +Y  AVT +G VY++G G+   LGHG   D   P 
Sbjct: 560 SRDQPTKITEL--VGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPT 617

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            +   +   I  +   +GD   +A+ ++G V++WG G  G LG G       P+ +  L+
Sbjct: 618 LVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQ 677

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                +V    + +  L  +GSVY +G      LG    G  + V  P++++ L    + 
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG---HGSENHVRFPKLVEGLNGKCIK 734

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +++ G  H + +TD G ++G+G N+  Q+G  +     EPT
Sbjct: 735 KVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPT 775



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   +LAVT +G VY+ G
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV-QLVGGEQTLLAVTSDGKVYATG 4026

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             G+   LG G     L P  +++ +   I  V V++G +H +AL + G VY+WG+G  G 
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGK 4086

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG++     P+ + +L+    V +      +  +   G +Y +G   +G LG    G 
Sbjct: 4087 LGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLG---HGD 4143

Query: 302  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            S+  ++P+++++L    V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4144 SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI 4203

Query: 360  PTEI 363
            P +I
Sbjct: 4204 PMKI 4207



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S +  V+S G    G LGHG +   C     I+      +V ++    H
Sbjct: 4060 VNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNG-CDHPQLIDALQGKEIVDIACGGAH 4118

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 120
            +A V   G+++T G       GH D+   + +P+LVE L G     +  G      L I 
Sbjct: 4119 SAAVTAGGEIYTWGKGRYGRLGHGDSEDQM-KPKLVETLIGFKVIDIACGSGDAQTLCIT 4177

Query: 121  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
               +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4178 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VVKVECGSQFSVALTRSGSVYT 4236

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG       P+ I     +G  ++ ++ G  H VA    G V+TWG    
Sbjct: 4237 WGKGDYHRLGHGSDEHVRHPKKIAAL--QGKKIICIATGSLHCVACSDLGEVFTWGDNDE 4294

Query: 240  GALGHG 245
            G LG G
Sbjct: 4295 GQLGDG 4300



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 58
            G++   L  +  VFS G    G LGH        P+  + +   RI          ++  
Sbjct: 3081 GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--------DIACG 3132

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 116
             +H+A +  +G++FT G       GH D N    RP+LV+AL G    QV  G     T 
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGD-NLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             L+  G V + G    G+LG G +     P +I  L  +G V  I  G  + LA+T  G 
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLG-VCMIECGAQFSLALTKFGQ 3250

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            VY++G G  F LGHG      +P  +++   K I  V V+ G  H +     G VY WG 
Sbjct: 3251 VYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKI--VHVAVGALHCLCATDQGQVYAWGD 3308

Query: 237  GYCGALGHG 245
               G  G+G
Sbjct: 3309 NDHGQQGNG 3317



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G++   L  +  V+S G+   G LGHG   ++    T+I      +V+ +S    ++A V
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQP-TKITELVGKNVIHISCGATYSAAV 588

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 123
             SG+V+T G  +    GH  T+     P LV  LK      +  G      L +   G 
Sbjct: 589 TSSGEVYTWGRGNYGRLGH-GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G   +G+LG G +    TPK I  L+++  V ++  G  + LA+T +G VY++G G
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI-EVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            N  LGHG ++    P+ ++    K I  V V +G  HV+AL   G VY WG+   G +G
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVG 764

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
              E + + P  L+ L+            K  V +D G      W
Sbjct: 765 ETSETNVSEPTLLTLLQG-----------KNIVDIDCGPNQSIAW 798



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 18   VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
            VFS G    G LG G  +  C     I   +   V  +      +  + + GQV+T G  
Sbjct: 3199 VFSWGDGDFGKLGRGG-SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKG 3257

Query: 78   SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
              F  GH  +++ + +P LVE+L       V  G       T +G V+  G N HGQ G+
Sbjct: 3258 DYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316

Query: 138  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
            G  L    P  +  LE V  V ++A G S+ +A T
Sbjct: 3317 GTILVNRKPSLVLNLEGV-RVNRVACGSSHSIAWT 3350



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 228  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            SG +Y WG  + G LG  +     +P    +L +   VQ+   ++    +   G VY   
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA-- 4024

Query: 288  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
              G+G+ G    G +D +L P +L+S++   + +++  +G  H + ++  G+++ +G+ +
Sbjct: 4025 -TGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGD 4083

Query: 346  RAQLGHDTLRGCLEPTEI 363
              +LGH    GC  P  I
Sbjct: 4084 DGKLGHGNKNGCDHPQLI 4101


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  119 bits (297), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 287
           T+G+   G LG       + + P+ + SL+S L V  C  K    +  D    +G   FG
Sbjct: 212 TFGESADGRLGLSAHQLANHSYPQRVESLRSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
            +G G L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGMLVF----VADS---PVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 348 QLGH 351
           +LGH
Sbjct: 324 KLGH 327



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 60
           +  G  HTL+  S   + + G +  G LG G      +SF R+  F   A +  +SA ++
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+ G   +  +T 
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PQ--ELNMGQSIHWVSCGYRHSALVTD 206

Query: 121 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G V+T G +  G+LG       +   P+ +   E + SV+Q+A G  + LA+T + + Y
Sbjct: 207 SGDVYTFGESADGRLGLSAHQLANHSYPQRV---ESLRSVLQVACGGKHTLALTEDEL-Y 262

Query: 179 SFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            FG G    LG G        P A+  FR+    V  V+ G++H   +  SG +YT+G G
Sbjct: 263 CFGGGEFGQLGLGMLVFVADSPVAVGHFRKD--RVTHVTCGEQHSALITDSGLLYTFGDG 320

Query: 238 YCGALGHGDE 247
             G LGHGDE
Sbjct: 321 RHGKLGHGDE 330



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-QELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 72  FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           +T G+++    G   H+  N     P+ VE+L+ V   QV  G   T  LT    ++  G
Sbjct: 211 YTFGESADGRLGLSAHQLANHSY--PQRVESLRSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 129 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
               GQLG G       +P ++    +   V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGMLVFVADSPVAVGHFRK-DRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 188 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 333 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPQEL 185


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3991

Query: 113  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3992 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDIACGSGDAQTLC 4050

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4051 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4108

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4109 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4168

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4169 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 94   PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3978

Query: 152  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3979 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 212  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4097

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4098 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154

Query: 332  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4155 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4183



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 11/298 (3%)

Query: 48   SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
            S+  +++  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 2940 SSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 165
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 283
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3176 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDTL    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 162
            ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2946 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 2999

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 221
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 339
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176

Query: 340  GFGDNERAQLGHDTLRGCLEPTEI 363
             +GD +  +LG     GC  P  I
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNI 3200



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 122  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI----QLIGGEQTLFAVTADGKLY 3898

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3899 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3958

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3959 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4018

Query: 299  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               S+  L+P++++ L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4019 ---SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4075

Query: 357  CLEPTEI 363
            C  P +I
Sbjct: 4076 CKVPMKI 4082



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A   H
Sbjct: 3935 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 3993

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
            +A V  +G ++T G       GH D+   + +P+LVE L+G     +   +G   T  LT
Sbjct: 3994 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDIACGSGDAQTLCLT 4052

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
                V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G VY+
Sbjct: 4053 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4111

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG    
Sbjct: 4112 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4169

Query: 240  GALGHG 245
            G LG G
Sbjct: 4170 GQLGDG 4175



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +       HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQ----GGKHVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 66   LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 5    TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4043 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4101

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4102 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4160

Query: 124  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4161 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4206



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 220
            P   L      +        N  + H E HD    E   + +Q   R+          D+
Sbjct: 3785 PRLFLDEVAKKIRELMADSENMDVLH-ENHDIFKREQDEQLVQWMNRRP---------DD 3834

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
              ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F +   
Sbjct: 3835 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTAD 3894

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 338
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 3895 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3951

Query: 339  FGFGDNERAQLGHDTLRGCLEPTEI 363
            + +G+ E  +LGH     C  P  I
Sbjct: 3952 YSWGEAEDGKLGHGNRSPCDRPRVI 3976


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 2677 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 2734

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 2851

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 2852 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 2909

Query: 234  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2969

Query: 294  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 2970 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3004



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 64   FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 2688 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 2745

Query: 121  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 2746 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 2802

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 2803 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 2860

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 2861 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2919

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2920 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2971



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 15/270 (5%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 349

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 350 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 410 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 462

Query: 250 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 463 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 521

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
           +LR  IL SL     S I+     ++V T 
Sbjct: 522 LLRTPILVSLPTFPASGIACTSAQSLVWTQ 551



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 124  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 2698

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758

Query: 241  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 2818

Query: 301  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2819 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 2875

Query: 359  EPTEI 363
             P EI
Sbjct: 2876 TPHEI 2880



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 117 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 282 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 340

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 400

Query: 235 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 401 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 455

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 456 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 512



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           + Q+A   + ML ++  G +Y++               E +P  ++         +    
Sbjct: 228 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 277

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 278 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 337

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 335
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 338 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 394

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEP 360
           G +F +GD +  +LG+    G L+P
Sbjct: 395 GLVFAWGDGDYGKLGNGNCNGSLQP 419


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 11/338 (3%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V + G +  G LG G  T +    T +  P+   +  ++A  +H+  +  +G V   G 
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVT-VGLPAGTTITALAAGGSHSLALTDTGVVLAWGS 116

Query: 77  NSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
           NS    G    T+R    P  V    G     + AG   +  LT  G V   GSN++GQL
Sbjct: 117 NSRGQLGDGTTTDR--STPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQL 174

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G G T  R TP ++      G+ +   A  +Y LA+T  G   ++GS S   LG G   D
Sbjct: 175 GDGTTTARSTPVTVG--LPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
              P  +      G  +  ++A  +H +AL  +G V  WG    G LG G   +++ P  
Sbjct: 233 RSTPVTVS--LPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT 290

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +          + A +  T VL   G+V  +G    G LG  D   +D+   P  +    
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLG--DGTTTDRS-TPVTVGLPA 347

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              ++ ++ G YH++ +TD G +  +G N   QLG  T
Sbjct: 348 GTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGT 385



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 6   GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  H+L ++++ V  + GS+  G LG G  T +    T +  P+   +  ++A   H+  
Sbjct: 98  GGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVT-VGLPAGTTITALAAGRRHSLA 156

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 121
           +  +G V   G NS+   G   T       R      G+P       L  + +   LT  
Sbjct: 157 LTDTGAVLAWGSNSNGQLGDGTTTA-----RSTPVTVGLPAGTTITALAASTYSLALTDT 211

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G     GSN+ GQLG G T DR TP +++ L    ++  +AA   + LA+T  G V ++G
Sbjct: 212 GAALAWGSNSRGQLGDGTTTDRSTPVTVS-LPAGTTITALAASYDHSLALTDTGAVLAWG 270

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           S SN  LG G   +   P  +      G  +  ++AG  H + L S+G V  WG    G 
Sbjct: 271 SNSNGQLGDGTTTNRSTP--VTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQ 328

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           LG G   D++ P  +          + A    +  L DTG+V  +G   +G LG
Sbjct: 329 LGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 127/305 (41%), Gaps = 8/305 (2%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V   GDN S   G   T      P  V    G     + AG + +  LT  G V   GSN
Sbjct: 59  VLAWGDNFSGQLGDGTTTA-RSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           + GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++GS SN  LG 
Sbjct: 118 SRGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G       P  +      G  +  ++A   + +AL  +G    WG    G LG G   D+
Sbjct: 177 GTTTARSTP--VTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDR 233

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
           + P  +S         + A    +  L DTG+V  +G    G LG    G +     P  
Sbjct: 234 STPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLG---DGTTTNRSTPVT 290

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           +       ++ ++ G  HT+V+T  G +  +G N   QLG  T      P  + +     
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTT 350

Query: 371 DTGLA 375
            T LA
Sbjct: 351 ITALA 355



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 9/250 (3%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           GR H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++AS    A 
Sbjct: 150 GRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVT-VGLPAGTTITALAASTYSLAL 208

Query: 65  VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
              +G     G NS    G    T+R    P  V    G     + A  + +  LT  G 
Sbjct: 209 T-DTGAALAWGSNSRGQLGDGTTTDR--STPVTVSLPAGTTITALAASYDHSLALTDTGA 265

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V   GSN++GQLG G T +R TP ++  L    ++  +AAG S+ L +T  G V ++GS 
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           SN  LG G   D   P  +      G  +  ++AG  H +AL  +G V  WG    G LG
Sbjct: 325 SNGQLGDGTTTDRSTP--VTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382

Query: 244 HGDEIDKTLP 253
            G   D++ P
Sbjct: 383 DGTTTDRSTP 392



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 5/143 (3%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++A  +H   +  
Sbjct: 256 HSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT-VGLPAGTTITALAAGRSHTLVLTS 314

Query: 68  SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           +G V   G NS+   G    T+R    P  V    G     + AG   +  LT  G V  
Sbjct: 315 AGAVLAWGSNSNGQLGDGTTTDR--STPVTVGLPAGTTITALAAGYYHSLALTDTGAVLA 372

Query: 127 CGSNTHGQLGHGDTLDRPTPKSI 149
            G N++GQLG G T DR TP ++
Sbjct: 373 WGGNSYGQLGDGTTTDRSTPVTV 395


>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
          Length = 387

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 29/336 (8%)

Query: 32  GPETTQCVSFTR--------INFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G E+T C++  R        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 28  GAESTFCITIQRKVFMWGSGIQIPQQLDLQEIEQIAASKEHW-FAWSETQVFGCGSNKQG 86

Query: 81  CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 135
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSNT+ QL
Sbjct: 87  KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQL 146

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 147 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAK 206

Query: 196 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            ++ P  I +     I   +++ G  HV+A+D+ G +Y+WG+G  G LGHG+  D   P 
Sbjct: 207 CMKLPSPITSLGNAKI--AKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPT 264

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +SSL++    +V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 265 QISSLQA--IREVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDT---PQMLQI- 318

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              H   I+ G +H+ V+T  G LF FG+NE++QLG
Sbjct: 319 ---HGEMIACGRHHSGVLTKNGALFMFGNNEQSQLG 351



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 19/294 (6%)

Query: 2   QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 59
           QI   + H    S + VF CGS+  G LG          F   +  S     + +++   
Sbjct: 61  QIAASKEHWFAWSETQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 120

Query: 60  NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 121 DHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 180

Query: 117 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +   G + + GSN  G+LG       +  P+P  I  L     + ++A G  ++LA+  
Sbjct: 181 AIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSP--ITSLGNA-KIAKLALGTFHVLAIDT 237

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            G +YS+G G    LGHG  +D  +P  I + +     +  V+ G+ H +AL ++G VY 
Sbjct: 238 QGNLYSWGRGLQGQLGHGNSNDCNKPTQISSLQA----IREVTCGEAHSMALQNNGSVYV 293

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G G  G LG GD   +  P+    L+ H  +  C R   + VL   G+++ FG
Sbjct: 294 FGSGQFGQLGLGDYKQQDTPQ---MLQIHGEMIACGR-HHSGVLTKNGALFMFG 343



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 12/217 (5%)

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR---RKGI 210
           ++  + QIAA   +  A +   V   FG GSN     G  +    P     F    + G 
Sbjct: 55  DLQEIEQIAASKEHWFAWSETQV---FGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGW 111

Query: 211 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQ 266
            + +++ G +H VAL   +    ++ WG      LG    E    +P  L S      V 
Sbjct: 112 QLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVD 171

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    +++++ G 
Sbjct: 172 IYAQHNYTMAIDEEGRIFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNAKIAKLALGT 229

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +H + +  +G L+ +G   + QLGH     C +PT+I
Sbjct: 230 FHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPTQI 266


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            V     H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G  
Sbjct: 81  HVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI-HPRLIESLAVCNVDIVACGEF 139

Query: 114 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            T  +T  G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +
Sbjct: 140 HTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALI 199

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 225
           T  G +++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+      
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVT 257

Query: 226 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
                 SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +
Sbjct: 258 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTS 317

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G V   G   +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F 
Sbjct: 318 GKVLSMGNTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFT 373

Query: 341 FGDNERAQLGHDTLRGCLEPTEI 363
           +G     +LGH  +     PT +
Sbjct: 374 WGKGANGRLGHGDIEDRKIPTLV 396



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKSIA----PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 250
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 21/339 (6%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L+  N  VF+ G    G LGHG      +    I   +  +V  V+  E H   V 
Sbjct: 87  KHSALVTKNGEVFTWGEESGGRLGHGSREDS-IHPRLIESLAVCNVDIVACGEFHTCAVT 145

Query: 67  QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G+++T GD +      GH          R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQL 205

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------G 173
            T G  T G LGHG+      PK +  L  +   + +A G  +  A+             
Sbjct: 206 FTFGDGTFGVLGHGNRESISCPKEVESLSGL-KTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G ++++G G    LGHG++   L+P  + +      H  R++ G    V L +SG V +
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFH--RIACGHSLTVGLTTSGKVLS 322

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
            G    G LG+    D  +P  +  +     VQV        VL     V+ +G    G 
Sbjct: 323 MGNTVYGQLGN-PRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGR 381

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
           LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 382 LGHGD--IEDRKI-PTLVEALRDRSVRHIACGANFTAAI 417



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+  + D   P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 18/274 (6%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG-ALE 182

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P+ + SL     + V 
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 269 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
                T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDY 299

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              +I+ G   TV +T  G++   G+    QLG+
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGN 333



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 167
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG-DGTHNVGLLG 164

Query: 299 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 165 HGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESI 224

Query: 358 LEPTEI 363
             P E+
Sbjct: 225 SCPKEV 230



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 226 DSSGYVYTWGKGYC-GALGHGDE--------IDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DSSG VY WG+  C  ++  G +         D   P+PL S     A  V    + + +
Sbjct: 32  DSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSAL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG   R   +  + PR+++SL   +V  ++ G +HT  VT  G
Sbjct: 92  VTKNGEVFTWGEESGGRLGHGSR---EDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAG 148

Query: 337 RLFGFGD 343
            L+ +GD
Sbjct: 149 ELYTWGD 155


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 10/251 (3%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           PR +  L+G+  +Q+  G + T  LT  G V +CGSN H QLG   +  +P P +     
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTAL--- 98

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHV 212
           +   +VQ+  G  + +A+T  G VY +GS S   LG+GE Q   L PR ++T       V
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTL--APFTV 156

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARK 271
           V+++ G  H +AL ++G +Y WG    G LG G   + + +P  +++L      Q+    
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGA 216

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             + VL  +G ++ +G   FG LG  D    D+   P +L +LR  HV  I+ G  H+  
Sbjct: 217 NHSMVLSKSGVIFVWGSNRFGQLGLSDN--KDRAF-PTLLKTLRQQHVKFIAAGGAHSAA 273

Query: 332 VTDRGRLFGFG 342
           +T  G +F FG
Sbjct: 274 LTAHGGVFTFG 284



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 24/352 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI TG +HTL L S+  V SCGS+    LG    TT+    T +       +VQV   + 
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQ---CLRIVQVCCGQQ 111

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + ++GQV+  G NS    G+ +       PR V+ L      Q+  G N    L  
Sbjct: 112 HSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 179
            G ++  G N +GQLG G T+  P    +     +G  + QIA G ++ + ++ +GV++ 
Sbjct: 172 NGALYAWGDNGNGQLGIG-TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV 230

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GS     LG  +  D   P  ++T R++  HV  ++AG  H  AL + G V+T+G  + 
Sbjct: 231 WGSNRFGQLGLSDNKDRAFPTLLKTLRQQ--HVKFIAAGGAHSAALTAHGGVFTFGWSFY 288

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
                  E+  +L    S+ +S LA       RK F L++      F    +GS G    
Sbjct: 289 ----ESHEVRISLRGTESNPQSALA-------RKLFSLIER----EFCRHSYGSYGQLGH 333

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG 350
           G  +  L P  +  L    ++QI+ G  HTV      G++F FG     QLG
Sbjct: 334 GSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 46/299 (15%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G+ H++ ++ +  V+  GS+  G LG+G      +S   +   +   VVQ++   
Sbjct: 104 VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGS 163

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH   +L +G ++  GDN +   G      P   P  V  L G+P  Q+  G N +  L+
Sbjct: 164 NHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   GSN  GQLG  D  DR  P  +  L +   V  IAAG ++  A+T +G V++
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQ-QHVKFIAAGGAHSAALTAHGGVFT 282

Query: 180 F---------------GSGSN----------------FC---------LGHGEQHDELQP 199
           F               G+ SN                FC         LGHG ++D+L P
Sbjct: 283 FGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTP 342

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
             IQ     G  + +++ G  H V    + G V+T+G G  G LG    +  T P PL+
Sbjct: 343 MKIQEL--MGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVST-PTPLA 398



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 14/176 (7%)

Query: 180 FGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           FG+ ++  LG G  E H    PR+I     +GI V +++ G  H + L S G V +    
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQL--EGIRVRQIATGAHHTLVLTSHGRVLS---- 74

Query: 238 YCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            CG+  H   G E+  T PEP+++L+    VQVC  ++ +  L + G VY +G    G L
Sbjct: 75  -CGSNDHDQLGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQL 133

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G  +    +  L PR + +L    V QI+ G  H + + + G L+ +GDN   QLG
Sbjct: 134 G--NGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLG 187



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 285 GFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           GFG    G LG    G+ D ++R PR +  L    V QI+TG +HT+V+T  GR+   G 
Sbjct: 20  GFGNTNSGELGLG--GIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGS 77

Query: 344 NERAQLGHDTLRGCLEP 360
           N+  QLG +      EP
Sbjct: 78  NDHDQLGQEVSTTKPEP 94


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 22/345 (6%)

Query: 31  HGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 89
           HGP  TT  +    +       V  V+    HAA + +  +VFT G+  S   GH     
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGH-GAGT 300

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPK 147
            IF+PRL+E+L     + +  G   T  +T  G ++T G  TH  G LGHG T+    PK
Sbjct: 301 SIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPK 360

Query: 148 SIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
            ++ PLE +  V  ++ G  +   +T +G +Y+FG G+   LGHG +     P+ +++  
Sbjct: 361 RVSGPLEGL-QVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESL- 418

Query: 207 RKGIHVVRVSAGDEHVVAL---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
            KG+  + VS G  H  A+          SSG ++TWG G    LGHGD   K  P  + 
Sbjct: 419 -KGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVP 477

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRA 316
           SL  +   +       T  L  +G ++  G   +G LG P+    +    PR++ D +  
Sbjct: 478 SLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPN----NDGRYPRLVEDKVGG 533

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             V +++ G YH  V+T+ G ++ +G     +LGH  +     PT
Sbjct: 534 GGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPT 578



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 20/339 (5%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   V 
Sbjct: 272 KHAALITRQAEVFTWGEECSGRLGHGAGTS-IFQPRLLESLSICNVEIIACGEFHTCAVT 330

Query: 67  QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +G ++T GD  +++   GH  T       R+   L+G+    V+ G   T  +T  G +
Sbjct: 331 ATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQL 390

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 175
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 391 YTFGDGTFGALGHGNRETISYPKEVESLKGL-RTISVSCGVWHSAAVVEVIMTQSNASSG 449

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++++G G  + LGHG++  +L+P  + +      H  + + G    + L +SG+++T G
Sbjct: 450 KLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFH--KSACGHTLTIGLTTSGHMFTVG 507

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSL 294
               G LG+ +  D   P  +        V   A       VL +TG VY +G    G L
Sbjct: 508 SSVYGQLGNPNN-DGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRL 566

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G  D  ++D+ + P ++++LR   V +I+ G   T  ++
Sbjct: 567 GHGD--IADRKV-PTLVEALRDRSVKRIACGSSFTAAIS 602



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 22/273 (8%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 319 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIP-KRVSGPLEGLQVSTVSCG 377

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             H A +  SGQ++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  + 
Sbjct: 378 TWHTALITSSGQLYTFGDGTFGALGHGNRET---ISYPKEVESLKGLRTISVSCGVWHSA 434

Query: 117 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            +            G + T G     +LGHGD   +  P  +  L +  +  + A G + 
Sbjct: 435 AVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDY-NFHKSACGHTL 493

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L +
Sbjct: 494 TIGLTTSGHMFTVGSSVYGQLGN-PNNDGRYPRLVED-KVGGGGVVEVACGSYHVAVLTN 551

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           +G VYTWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 552 TGEVYTWGKGANGRLGHGDIADRKVPTLVEALR 584



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 20/255 (7%)

Query: 1   MQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQV 55
           +Q++T   G +HT LI++S  +++ G    G LGHG   T  +S+ + +        + V
Sbjct: 369 LQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISV 426

Query: 56  SASENHAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           S    H+A V++         SG++FT GD   +  GH D +  + +P  V +L      
Sbjct: 427 SCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKL-KPTCVPSLIDYNFH 485

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           +   G   T  LT  GH+ T GS+ +GQLG+ +  D   P+ +      G VV++A G  
Sbjct: 486 KSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNN-DGRYPRLVEDKVGGGGVVEVACGSY 544

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           ++  +T  G VY++G G+N  LGHG+  D   P  ++  R + +   R++ G     A+ 
Sbjct: 545 HVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RIACGSSFTAAIS 602

Query: 227 SSGYVYTWGKGYCGA 241
              +V    +  C A
Sbjct: 603 QHKWVSGVEQSQCSA 617



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 6/177 (3%)

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   
Sbjct: 243 GPGATTDILVPKPLES--NVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGT 300

Query: 249 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
               P  L SL   ++ +  C  +  T  +  TG +Y +G  G  + G    G +     
Sbjct: 301 SIFQPRLLESLSICNVEIIACG-EFHTCAVTATGDLYTWG-DGTHNAGLLGHGSTVSHWI 358

Query: 308 P-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           P R+   L    VS +S G +HT ++T  G+L+ FGD     LGH        P E+
Sbjct: 359 PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEV 415



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 226 DSSGYVYTWGKGYCGAL----------GHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKT 274
           +S G VY WG+  C             G G   D  +P+PL S++   ++   C  K   
Sbjct: 216 ESFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAA 275

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            +      V+ +G    G LG    G    + +PR+L+SL   +V  I+ G +HT  VT 
Sbjct: 276 LI-TRQAEVFTWGEECSGRLG---HGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTA 331

Query: 335 RGRLFGFGD 343
            G L+ +GD
Sbjct: 332 TGDLYTWGD 340


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 169/372 (45%), Gaps = 35/372 (9%)

Query: 6    GRYHTLLISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAH----VVQVSASEN 60
            G +   + S+ + ++ G++  G L   P + +   +  RI  P  A       QV+A ++
Sbjct: 801  GSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDS 860

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGF 117
            H   +  +G V++ G N     G    T+R  + P+ V+   G P K  QV+AG+  +  
Sbjct: 861  HVLAIGSNGIVYSWGRNDHGQLGDGTTTDR--YNPQPVKDTGGQPFKAVQVSAGVADSAA 918

Query: 118  LTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAV 171
            +     V+T GS + G+     +  T   PTP   A  +  G     VQ++   S+++A+
Sbjct: 919  IDSENRVYTWGSESTGKGQTPAYSTTRKNPTPA--ADPDNPGQTLHAVQVSLNWSFVMAL 976

Query: 172  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
              +G VY++G  +N  LG+G                +     ++SAG  H +A+D+ G  
Sbjct: 977  DADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGNT 1036

Query: 232  YTWGKGYCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            +TWG    G LG G   DK  P+    P  + +S  A Q+ A    + V+   GS++ +G
Sbjct: 1037 WTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWG 1096

Query: 288  WMGFGSLGFPDR-------GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            W   G LG  +         + D   + +   ++R+      S G  H++ +   G L+ 
Sbjct: 1097 WNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRS------SAGQLHSLAIRQDGNLWA 1150

Query: 341  FGDNERAQLGHD 352
            +GDN+  QLG++
Sbjct: 1151 WGDNQYGQLGNN 1162



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 19/277 (6%)

Query: 101  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVG-- 156
            +G+   QV+AG +F+  +   G+ +  G+N +GQL     D   + TP  I PL +    
Sbjct: 790  RGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRI-PLPDGADS 848

Query: 157  --SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 214
              +  Q+AAG S++LA+  NG+VYS+G   +  LG G   D   P+ ++    +    V+
Sbjct: 849  SFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQ 908

Query: 215  VSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            VSAG     A+DS   VYTW     GKG   A     +      +P +  ++  AVQV  
Sbjct: 909  VSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSL 968

Query: 270  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGL 326
                   L   G+VY +G+   G LG    G SD       P  L S ++   SQIS G 
Sbjct: 969  NWSFVMALDADGNVYTWGYNTNGQLG---NGTSDSTSYASNPARLPS-QSFQASQISAGS 1024

Query: 327  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +H + +   G  + +G N   QLG  +     +P  +
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTV 1061



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 159/376 (42%), Gaps = 29/376 (7%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 56
           Q++ GR H L + S+ +++S GS+  G LG G  T +      +  P         VQ S
Sbjct: 238 QVSAGRGHILAVASDGNLYSWGSNDHGQLGDG-TTAERHEPVPVKKPQGVSQDFTWVQAS 296

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPIFRPRLVEALKGVPCKQVTAG 111
           A    +  +   G++++ GDN+    G+  T       P+  P+   A  G   KQ   G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQ--NAPSGFTWKQEAVG 354

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 168
                 L   G++++ G N H QLG G T +R  P  +     V S     Q++    + 
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHS 414

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFR--RKGIHVVRVSAGDEHVVAL 225
           LA+  +  +Y +G+ +   +G G   D ++ P  I T +         +   GD +  A+
Sbjct: 415 LALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYSQAI 474

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            S G +YTWG G  G +G+G  +D   P    +P   L +    QV      +  +   G
Sbjct: 475 GSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVASLAIGSDG 534

Query: 282 SVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGL-YHTVVVTDRGR 337
           ++Y +G    G LG      R    +V  P+  ++       Q S G   ++  +   G 
Sbjct: 535 NLYSWGANNNGQLGDNTTTQRNTPIRVAAPQ--NAPTGLTWVQASAGWDNNSFGLASDGN 592

Query: 338 LFGFGDNERAQLGHDT 353
           L+ +G N   QLG +T
Sbjct: 593 LYSWGKNANGQLGDNT 608



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 14/217 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALK 101
           P      QVSA   H   V   G +++ G N     G      R    P+ +P+ V   +
Sbjct: 231 PRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--Q 288

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---V 158
                Q +AG  F+  L   G +++ G NT+GQLG+  T    TP+ +   +   S    
Sbjct: 289 DFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRV 215
            Q A G  + L +  +G +YS+G   +  LG G   E+H  +Q + + +    G    ++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-MPSGVPSGFAWKQM 407

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           S    H +AL S  ++Y WG    G +G G   D  +
Sbjct: 408 SGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKI 444



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---S 157
           +G+   QV+AG      +   G++++ GSN HGQLG G T +R  P  +   + V    +
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRV 215
            VQ +AG  + + +  +G +YS+G  +   LG+     H   +P  +      G    + 
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQE 351

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV-QVCARK 271
           + G  H + L S G +Y+WG      LG G   ++  P   +  S + S  A  Q+    
Sbjct: 352 AVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWG 411

Query: 272 RKTFVLVDTGSVYGFG 287
             +  L     +YG+G
Sbjct: 412 WHSLALGSDNWIYGWG 427



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 12   LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQ 70
            L ++ +V++ G +  G LG+G   +   +      PS +    Q+SA   HA  +   G 
Sbjct: 976  LDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGN 1035

Query: 71   VFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             +T G N     G   T+   ++P+ V    +  + +   Q++AG++ +  +   G +  
Sbjct: 1036 TWTWGYNGYGQLGDGSTSD-KYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWA 1094

Query: 127  CGSNTHGQLGHGDTLDRPTPKSI---APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
             G N++GQLG G+T+++  P +I   A   +    V+ +AG  + LA+  +G ++++G  
Sbjct: 1095 WGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDN 1154

Query: 184  SNFCLGHGE 192
                LG+ +
Sbjct: 1155 QYGQLGNNQ 1163



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL----KSHL 263
           +GI   +VSAG  H++A+ S G +Y+WG    G LG G   ++  P P+       +   
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQ 321
            VQ  A    +  L   G +Y +G   +G LG  +   +     P  L  ++       Q
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGN-NTTTAHYTPEPVNLPQNAPSGFTWKQ 350

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + G  H + +   G L+ +GDN+  QLG  T      P ++
Sbjct: 351 EAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQV 392



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 28/273 (10%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVS 56
           Q   G  H L L S+ +++S G +    LG G  TT+  +  ++  PS         Q+S
Sbjct: 350 QEAVGSLHALGLGSDGNLYSWGDNDHNQLGDG-TTTERHAPIQVKMPSGVPSGFAWKQMS 408

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK----QVTAGL 112
               H+  +     ++  G N+    G          P  +   +GVP      Q   G 
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGD 468

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPT----PKSIAP---LEEVGSVVQIAA 163
            ++  +   G+++T G   +G +G+G T+D   PT    P  + P    ++V S++ +A+
Sbjct: 469 YYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQV-SLLSVAS 527

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--GIHVVRVSAG-DE 220
                LA+  +G +YS+G+ +N  LG         P  +   +    G+  V+ SAG D 
Sbjct: 528 -----LAIGSDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQASAGWDN 582

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           +   L S G +Y+WGK   G LG     D+ +P
Sbjct: 583 NSFGLASDGNLYSWGKNANGQLGDNTTNDRHIP 615



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 20/169 (11%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
            QI+ G +H L I ++ + ++ G +  G LG G       P+T Q  + T  +        
Sbjct: 1019 QISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL----KAT 1074

Query: 54   QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAG 111
            Q+SA  +H+  V + G ++  G NS+   G  +T     +P  ++  A K    K V + 
Sbjct: 1075 QISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQT-KPATIKDPANKAQTFKAVRSS 1133

Query: 112  LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEV 155
                  L IR  G++   G N +GQLG+  T  R   P P +  P   V
Sbjct: 1134 AGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTATRNTTPMPVAFDPTPLV 1182


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 9/276 (3%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 108 VTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           VT G ++T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QI+ G  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDC 127

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + LAVT    V S+G   N  LG G   D   P+ I  F  +GI +  V+AG EH VA+ 
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAIT 185

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G +Y WG G  G LG GD  D+ +PE + ++     V V    R T  +  +G +Y  
Sbjct: 186 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 244

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           GW  +G LG  D    +  L PR + +L    +SQ+
Sbjct: 245 GWSKYGQLGHGD---FEDCLVPRKVQALSDKLISQV 277



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADY 75

Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
            +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+ 
Sbjct: 76  TVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVT 133

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
               V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGW 193

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++ 
Sbjct: 194 GWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLGH     CL P ++
Sbjct: 250 GQLGHGDFEDCLVPRKV 266



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 60  NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ G      +
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAV 132

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLY 191

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG +YT G   
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
            G LGHGD  D  +P  + +L   L  QV
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 4/158 (2%)

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           HV+ +SAG  H VAL +   V +WG+G  G LGHGD  D+ LP  LS+      V V   
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 271 KRKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              T     +G  VY +GW  FG LG  D      +  P  + +L+   + QIS G  H 
Sbjct: 73  ADYTVARSKSGKDVYSWGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           + VT   ++  +G N+  +LG  T +    P +I   E
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFE 167


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 142/312 (45%), Gaps = 18/312 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACG 330

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +  
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+    
Sbjct: 391 LATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVM 448

Query: 226 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 449 NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT 508

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F
Sbjct: 509 SGHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 565

Query: 340 GFGDNERAQLGH 351
            +G     +LGH
Sbjct: 566 TWGKGSNGRLGH 577



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 385

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 111
             H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444

Query: 112 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
              +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 503

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 504 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 561

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 593



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 23/236 (9%)

Query: 141 LDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
           +D   PK   PLE   V  V QIA G  ++  VT  G V+++   +   LGHG Q D  +
Sbjct: 256 IDVLIPK---PLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCR 312

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 256
           P+ ++      I  V  + G+ H  A+ +SG ++TWG G    G LGHG ++   +P+ +
Sbjct: 313 PKLVEFLALTNIDFV--ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV 370

Query: 257 SSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           S     L V  V      + +    G ++ FG   FG LG  DR   + V  P+ +  L 
Sbjct: 371 SGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLS 427

Query: 316 AHHVSQISTGLYHTVVV----------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                +++ G++HTV +          T   +LF +GD ++ +LGH      L PT
Sbjct: 428 GLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 483



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 36/345 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L++    VF+      G LGHG       P+  + ++ T I+F       
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF------- 326

Query: 54  QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V+  E H   V  SG +FT GD  ++    GH          R+   ++G+    V  G
Sbjct: 327 -VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG 385

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +   T  G + T G    G LGHGD      PK +  L  +   +++A G  + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGL-KTLKVACGVWHTVAI 444

Query: 172 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                     T +  ++++G G    LGHG +   L P  + +      +  +++ G   
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--QIACGHTF 502

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 280
            VAL +SG+V+T G    G LG  +  D  LP  +   L      ++        VL   
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             V+ +G    G LG  D+   D    P ++++LR  HV  IS G
Sbjct: 562 SEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCG 603



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 437

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 496

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 554

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G        S
Sbjct: 555 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGSN----FTS 608

Query: 228 SGYVYTWGKG 237
           S  ++ W  G
Sbjct: 609 SICIHKWVSG 618


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 168/367 (45%), Gaps = 27/367 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G YH+L + ++ +V++ GS+  G LG G  T +    + +      +VV +SA +
Sbjct: 199 VALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTATPR---LSPVQVSGLTNVVALSADD 255

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           ++   +   G V+  G NS    G   T  P   P  V  L  V    ++AG + +  L 
Sbjct: 256 SYTLALRTDGTVWAWGYNSYGQLGD-GTTTPRLSPVQVPGLTNVVA--LSAGYSHSLALR 312

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             G V   G N +GQLG+G     PT +S + P+  +  VV ++AG S+ LA+  +G V+
Sbjct: 313 TDGTVWAWGYNYNGQLGNG----IPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVW 368

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S   LG G       P  +         VV +SAGD H +AL + G V  WG  Y
Sbjct: 369 AWGYNSLGQLGDGTTIPRPSPVQVPDL----TDVVALSAGDSHSLALRTDGTVRAWGVNY 424

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G    +  P  +  L     V + A    T  L   G+V+ +G    G LG   
Sbjct: 425 SGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGSNSDGQLG--- 479

Query: 299 RGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               D    PR+  +  L   +V  +S G YH++ V   G ++ +G N   QLG  T   
Sbjct: 480 ----DGTTTPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTH 535

Query: 357 CLEPTEI 363
            L P ++
Sbjct: 536 RLTPVQV 542



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 162/350 (46%), Gaps = 21/350 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L + ++ +V++ GS+  G LG G  T +    + +  P    VV +SA  +H
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG---SPVQVPGLTDVVALSAGNHH 57

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   G V+  G NSS   G   T  P      V  L  V    ++AG ++T  L   
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGD-GTTTPRLSSVQVPGLTDVVA--LSAGSSYTLALRTD 114

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N +GQLG G T  R  P  +  L +V   V +++G  + LA+  +G V+++G
Sbjct: 115 GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDV---VALSSGIYHSLALRTDGTVWAWG 171

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             ++  LG G     L P  +         VV +SAG  H +A+ + G V+ WG  + G 
Sbjct: 172 DNASGQLGDGTATRRLSPVQVPGL----TDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQ 227

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G    +  P  +S L +   V + A    T  L   G+V+ +G+  +G LG    G 
Sbjct: 228 LGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLG---DGT 282

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +   L P  +  L   +V  +S G  H++ +   G ++ +G N   QLG+
Sbjct: 283 TTPRLSPVQVPGLT--NVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGN 330



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 169/371 (45%), Gaps = 35/371 (9%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+L L ++ +V++ G +  G LG G   T     + +  P    VV +SA +
Sbjct: 349 VALSAGYSHSLALRTDGTVWAWGYNSLGQLGDG---TTIPRPSPVQVPDLTDVVALSAGD 405

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +H+  +   G V   G N S   G   T     P+  P L + +       ++AG N T 
Sbjct: 406 SHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVA------LSAGGNHTL 459

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 174
            L   G V   GSN+ GQLG G T    TP+ ++P++ +G  +VV ++AG  + LAV  +
Sbjct: 460 ALRTNGTVWAWGSNSDGQLGDGTT----TPR-LSPVQMLGLTNVVALSAGYYHSLAVHTD 514

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+++GS S+  LG G     L P  +         VV +SAGD H +AL + G V+ W
Sbjct: 515 GTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL----TDVVALSAGDSHSLALRTDGTVWAW 570

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G      LG G    +  P  +  L     V + A    +  L   G+V+ +G   +G L
Sbjct: 571 GSNSSSQLGDGTTTPRGSPVQVPGLTD--VVALSAGGAHSLALRTDGTVWAWGSNYYGQL 628

Query: 295 GFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
           G       D    PR+   L ++    S +  G  H++ +   G    +G+N   QLG  
Sbjct: 629 G-------DGTTTPRLFPVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDG 681

Query: 353 TLRGCLEPTEI 363
           T    L P ++
Sbjct: 682 TSAFFLHPVQV 692



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 20/356 (5%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           Y   L ++ +V++ G +  G LG G  T +    + +  P   +VV +SA  +H+  +  
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPR---LSPVQVPGLTNVVALSAGYSHSLALRT 313

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G V+  G N +   G+     P  R   +     +    ++AG + +  L   G V   
Sbjct: 314 DGTVWAWGYNYNGQLGN---GIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAW 370

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G N+ GQLG G T+ RP+P  +  L +V   V ++AG S+ LA+  +G V ++G   +  
Sbjct: 371 GYNSLGQLGDGTTIPRPSPVQVPDLTDV---VALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G     L P  +         VV +SAG  H +AL ++G V+ WG    G LG G  
Sbjct: 428 LGDGTTTHRLSPVQVPDL----TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT 483

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
             +  P  +  L +   V + A    +  +   G+V+ +G    G LG    G +   L 
Sbjct: 484 TPRLSPVQMLGLTN--VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLG---DGTTTHRLT 538

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           P  +  L    V  +S G  H++ +   G ++ +G N  +QLG  T      P ++
Sbjct: 539 PVQVPGLT--DVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQV 592



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+L L ++ +V++ G +  G LG+G  T +  S           VV +SA  
Sbjct: 299 VALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL---IDVVALSAGY 355

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G V+  G NS    G   T   I RP  V+         ++AG + +  L 
Sbjct: 356 SHSLALRTDGTVWAWGYNSLGQLGDGTT---IPRPSPVQVPDLTDVVALSAGDSHSLALR 412

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T  R +P  +  L +V   V ++AG ++ LA+  NG V++
Sbjct: 413 TDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDV---VALSAGGNHTLALRTNGTVWA 469

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GS S+  LG G     L P  +        +VV +SAG  H +A+ + G V+ WG    
Sbjct: 470 WGSNSDGQLGDGTTTPRLSPVQMLGL----TNVVALSAGYYHSLAVHTDGTVWAWGSNSD 525

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---F 296
           G LG G    +  P  +  L     V + A    +  L   G+V+ +G      LG    
Sbjct: 526 GQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
             RG   +V  P + D      V  +S G  H++ +   G ++ +G N   QLG  T   
Sbjct: 584 TPRGSPVQV--PGLTD------VVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTP 635

Query: 357 CLEPTEI 363
            L P  +
Sbjct: 636 RLFPVLV 642



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 16/257 (6%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           + AG + +  L   G V   GSN+ GQLG G T  R +P  +  L +V   V ++AG  +
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDV---VALSAGNHH 57

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALD 226
            LA+  +G V+++GS S+  LG G       PR + + +  G+  VV +SAG  + +AL 
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGDGTT----TPR-LSSVQVPGLTDVVALSAGSSYTLALR 112

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           + G V+ WG  + G LG G    +  P  +  L     V + +    +  L   G+V+ +
Sbjct: 113 TDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTD--VVALSSGIYHSLALRTDGTVWAW 170

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG    G + + L P  +  L    V  +S G YH++ V   G ++ +G N  
Sbjct: 171 GDNASGQLG---DGTATRRLSPVQVPGLT--DVVALSAGGYHSLAVRTDGTVWAWGSNFS 225

Query: 347 AQLGHDTLRGCLEPTEI 363
            QLG  T    L P ++
Sbjct: 226 GQLGDGTATPRLSPVQV 242


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 132 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 185 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 239
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 360 PTEIFI 365
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 33/311 (10%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  ++L I+ +  +F+ G +  G LGH   T      +++   S   +VQ +    H
Sbjct: 43  VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQ 107
              V   G+ +  G N    CG       +T RP  R         P+L+        +Q
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQ 155

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V AG   +  LT  GHV T G         GD      P  +  L+    V  IA G  +
Sbjct: 156 VAAGGTHSVVLTREGHVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFH 208

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LA+  +G ++++G+     LG G+     QP  +Q     G+ +V ++AG  H  AL  
Sbjct: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTD 266

Query: 228 SGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           +G VY WG+G  G LG G  D+  K +P+ +  L     VQ+      +  +   G ++ 
Sbjct: 267 NGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFS 326

Query: 286 FGWMGFGSLGF 296
           FG    G LG+
Sbjct: 327 FGRGDHGRLGY 337


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 152/344 (44%), Gaps = 25/344 (7%)

Query: 36  TQCVSFTRINFPSAAH-----VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 90
           TQ  S T +  P A       V  ++   +H A   + G VFT G  S    GH   ++ 
Sbjct: 178 TQIPSKTDVLIPKALESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGH-GIDKD 236

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKS 148
              P LVE L+G   + V  G   T  L+    ++T G  TH  G LGHG       PK 
Sbjct: 237 FSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 149 I-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
           +  PLE +  VV IA G  +    T NG +++FG G+   LGHG+Q     P+ +Q    
Sbjct: 297 VNGPLEGL-QVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL-- 353

Query: 208 KGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
            G+  ++V+ G  H  A+           SS  ++TWG G    LGHG++     P  ++
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVA 413

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
            L  +   QV      T  L  +G V+  G    G LG P   +S   +   + D L   
Sbjct: 414 PLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNP---MSLGKIPTLVQDKLLGE 470

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            V +IS G +H  ++T++  ++ +G     +LGH  +     PT
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPT 514



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS---SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT  +S S     +  G+   G+LGHG E +  +    +N P     VV ++  
Sbjct: 254 VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIP-KMVNGPLEGLQVVSIACG 312

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+A    +G++FT GD +    GH D    ++ P+ V+ L G+   +V  G+  T  +
Sbjct: 313 TWHSALATSNGKLFTFGDGAFGVLGHGD-QESVWYPKEVQLLTGLKTIKVACGVWHTAAI 371

Query: 119 ----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                     +    + T G     +LGHG+      P  +APL E  +  Q+  G +  
Sbjct: 372 IEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEY-NFHQVECGHNMT 430

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G   +  LG+     ++ P  +Q  +  G  V ++S G  HV  L + 
Sbjct: 431 IALTTSGHVFTMGGTEHGQLGNPMSLGKI-PTLVQD-KLLGEFVEKISCGAHHVAILTNK 488

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             +YTWG G  G LGHGD  D+  P  + +LK
Sbjct: 489 SEIYTWGMGANGRLGHGDVEDRKSPTLVVALK 520



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 26/234 (11%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           PK++     V  V  IA G  ++   T  G V+++G  S   LGHG   D   P  ++  
Sbjct: 189 PKALE--SNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFL 246

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSL 259
             +G +   V+ G+ H  AL  S  +YTWG G    G LGHG E    +P+    PL  L
Sbjct: 247 --EGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGL 304

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
           +    V +      + +    G ++ FG   FG LG  D+   + V  P+ +  L     
Sbjct: 305 Q---VVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ---ESVWYPKEVQLLTGLKT 358

Query: 320 SQISTGLYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +++ G++HT  + +            +LF +GD +  +LGH      L+PT +
Sbjct: 359 IKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRV 412



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + I  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   +    ++V+  
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ--ESVWYPKEVQLLTGLKTIKVACG 364

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH +      +P  V  L      QV
Sbjct: 365 VWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGN-KETYLQPTRVAPLMEYNFHQV 423

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 167
             G N T  LT  GHV T G   HGQLG+  +L + PT      L E   V +I+ G  +
Sbjct: 424 ECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF--VEKISCGAHH 481

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           +  +T    +Y++G G+N  LGHG+  D   P  +   + + I  V
Sbjct: 482 VAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+A+++     + V  ++ G  H+      G+V+TWG+   G LGHG + D + P 
Sbjct: 185 DVLIPKALES---NVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPV 241

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-S 313
            +  L+ +    V   +  T  L  +  +Y +G  G  ++G    G       P++++  
Sbjct: 242 LVEFLEGNNFEFVACGEYHTSALSKSFELYTWG-DGTHNVGLLGHGSEASHWIPKMVNGP 300

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    V  I+ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 301 LEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEV 350


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 160/340 (47%), Gaps = 20/340 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSA 57
           QI  G+Y T +I  +  V +CG    G LG G  T Q     R+NF +      V     
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECLVKSVSSSKG 457

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCKQVTAGLNF 114
           S+ H   +   G+V++ GD      GH ++      P+LVE   G   V C  + AG   
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCC--IAAGYRH 514

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  +T  G ++T G   +G+LGHGD   R  P  +   ++V +V Q+A G ++ + V+ +
Sbjct: 515 SAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGSAHTVCVSQD 571

Query: 175 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           G  V+SFGSG N  LGH + +   +P+ I+    +G+ + +V  G +  +AL S+G VY 
Sbjct: 572 GQTVWSFGSGDNGKLGHSDTNRVYKPKVIEAL--QGMVIRKVCCGSQCSLALTSTGQVYV 629

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G     G  D    T P+ L +L+SH  V +         L    +VY +G    G 
Sbjct: 630 WGCGPSLGTGSVDATSAT-PKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQ 688

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G      +  + +P+ +  L    V QIS G  HTV  T
Sbjct: 689 CG--QGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 726



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 22/345 (6%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           SN  V+  GS+    L  G      V     +F SA    Q+ A +     +   G V  
Sbjct: 362 SNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQ---QIEAGQYCTFVIFPDGFVHA 418

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           CG  S    G  D+       RL    E L         +  + T  LT+ G V++ G  
Sbjct: 419 CGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGH-TLALTLDGKVYSWGDG 477

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
            +G+LGHG++  +  PK +        V  IAAG  +  AVT +G +Y++G G    LGH
Sbjct: 478 DYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGH 537

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEID 249
           G+ +    P  ++     G    +V+ G  H V +   G  V+++G G  G LGH D   
Sbjct: 538 GDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNR 593

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVL 306
              P+ + +L+  +  +VC   + +  L  TG VY +G    +G GS       V     
Sbjct: 594 VYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS-------VDATSA 646

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            P++L +L++H V  IS G  H V +T    ++ +G+N   Q G 
Sbjct: 647 TPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQ 691


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 291 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNAELVACG 349

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 350 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 408

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 409 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 466

Query: 227 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 467 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 526

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 335
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 527 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 582

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +G     +LGH  +     PT
Sbjct: 583 TEIYTWGKGANGRLGHGDVEDRTAPT 608



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 346 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 404

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 405 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 463

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 464 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 522

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 523 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 580

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 581 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 614



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 401 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 459

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 518

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 519 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 577

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V
Sbjct: 578 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTV 621



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 340 GVNAEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 397

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 398 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 457

Query: 272 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 458 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 514

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 515 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 569



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 8/178 (4%)

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 270 GAGSRVDSLVPKALQAA--VVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 327

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--- 305
           D + P+ + +L    A  V      T  +  +G +Y +G     S G    G S+ V   
Sbjct: 328 DVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWG-ADAQSGGLV--GHSNPVSHW 384

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +  R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 385 MPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 442


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 21/313 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S   NHAA + + G+VF  G+ S    GH+  +  +  P +VE+L G   K V  G
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPTIVESLDGFLVKFVACG 365

Query: 112 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  LT  G +   G N +G   +    T  +  P+ I+ PL  V S+  +A G  + 
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGV-SISNVACGDWHT 424

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
            AV+ +G ++++G G+   LGHG       P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESL--KGLWVKSVACGSWHTAAIVDV 482

Query: 228 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                      G ++TWG G  G LGH D   K  P  ++ L  H  VQV   +  T  L
Sbjct: 483 IFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVAL 542

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
             TG +Y  G    G LG P        +   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TRTGKIYTMGSSVHGQLGNPQAKNKSIAI---VEGKLKEEFVKEISSGSYHVAALTSGGS 599

Query: 338 LFGFGDNERAQLG 350
           ++ +G     QLG
Sbjct: 600 VYTWGKGTNGQLG 612



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 25/241 (10%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  V+  + H A V  SGQ+FT GD +    GH +  + +  P+ VE+LKG+  K V  G
Sbjct: 414 ISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNL-QSVSHPKEVESLKGLWVKSVACG 472

Query: 112 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
              T            F  + G + T G    G+LGH D   +  P  +A L E    VQ
Sbjct: 473 SWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVE-HDFVQ 531

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++ G    +A+T  G +Y+ GS  +  LG+ +  +  +  AI   + K   V  +S+G  
Sbjct: 532 VSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN--KSIAIVEGKLKEEFVKEISSGSY 589

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHLAVQVCAR 270
           HV AL S G VYTWGKG  G LG G+  D+ +P  + +L+          S+L   +C  
Sbjct: 590 HVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAICLH 649

Query: 271 K 271
           K
Sbjct: 650 K 650



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 22/273 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E    +  + ++ G N    +T RG V   G  + G+LGH   +D  +P  +  L+
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 154 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKG 209
             G +V+ +A G     A+T +G ++ +G    G N  +       +  PR I +    G
Sbjct: 356 --GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNL-VCEERTGSQWLPRQI-SGPLAG 411

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           + +  V+ GD H  A+ SSG ++T+G G  G LGHG+    + P+ + SLK      V  
Sbjct: 412 VSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVAC 471

Query: 270 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
               T  +VD            G ++ +G    G LG  D    +K L+P  +  L  H 
Sbjct: 472 GSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLQPTCVAQLVEHD 528

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             Q+S G   TV +T  G+++  G +   QLG+
Sbjct: 529 FVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGN 561



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 23/227 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +  G +HT  +S+S  +F+ G    GVLGHG    Q VS  + +       V  V+    
Sbjct: 417 VACGDWHTAAVSSSGQLFTYGDGTFGVLGHG--NLQSVSHPKEVESLKGLWVKSVACGSW 474

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A ++             G++FT GD      GH D  + + +P  V  L      QV+
Sbjct: 475 HTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKL-QPTCVAQLVEHDFVQVS 533

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPS 166
            G   T  LT  G ++T GS+ HGQLG+    +    KSIA +E   +   V +I++G  
Sbjct: 534 CGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN----KSIAIVEGKLKEEFVKEISSGSY 589

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++ A+T  G VY++G G+N  LG G   D   P  ++  R + +  +
Sbjct: 590 HVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSI 636



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 25/251 (9%)

Query: 127 CGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           C SN     G+  TL  D   PK + P   +  V  I+ G ++   +T  G V+ +G GS
Sbjct: 278 CVSN---HFGYHSTLQVDSLLPKLLEPTVML-DVRNISLGRNHAALITKRGEVFCWGEGS 333

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALG 243
              LGH    D   P  +++    G  V  V+ G+    AL  SG ++ WG+  Y G L 
Sbjct: 334 RGKLGHKVDMDVSSPTIVESL--DGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLV 391

Query: 244 HGDEI-DKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
             +    + LP  +S   + +++  V      T  +  +G ++ +G   FG LG    G 
Sbjct: 392 CEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLG---HGN 448

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-----------GRLFGFGDNERAQLG 350
              V  P+ ++SL+   V  ++ G +HT  + D            G+LF +GD ++ +LG
Sbjct: 449 LQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLG 508

Query: 351 HDTLRGCLEPT 361
           H  L   L+PT
Sbjct: 509 HADLEKKLQPT 519



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           Q D L P+ ++      + V  +S G  H   +   G V+ WG+G  G LGH  ++D + 
Sbjct: 290 QVDSLLPKLLEPTVM--LDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSS 347

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  + SL   L   V   + +T  L D+G ++ +G   +G     +     + L  +I  
Sbjct: 348 PTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG 407

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L    +S ++ G +HT  V+  G+LF +GD     LGH  L+    P E+
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNE 119

Query: 132 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 186 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 361 TEIFI 365
            E+ I
Sbjct: 346 LELPI 350


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 23/277 (8%)

Query: 94  PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPK 147
           P+ +E   KG    QV+AG      +T+   ++T       ++  GQLGHGDT     PK
Sbjct: 11  PQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPK 70

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQ 203
            +  L+++ +V Q++ G  + + VT +G VYSFGS    CLG+G+Q D       P  + 
Sbjct: 71  RVEALDKI-AVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVS 129

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
            F  +   V++VS GD HV+AL   G VYTWG G  G LG G E D + P+ +++   H 
Sbjct: 130 FFVNR--PVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHG 187

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDS 313
              V A    +F+L   G +   G      LG     +G+  K +   I        +  
Sbjct: 188 IRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKP 247

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           L  +++  +S G  H+ V+   G L  FG N+  QLG
Sbjct: 248 LSKYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLG 284



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 26/326 (7%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEAL 100
           F      +QVSA   H A V    +++T  +           GH DT      P+ VEAL
Sbjct: 17  FTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDT-ASYKAPKRVEAL 75

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGS 157
             +   QV+ G +FT  +T  G V++ GS+ +G LG+GD     D     S+        
Sbjct: 76  DKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRP 135

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V+Q++ G ++++A+T  G VY++GSG    LG G + D   P+ + T  R GI  V   A
Sbjct: 136 VLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVH--A 193

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG--------HGDEIDKTLP-----EPLSSLKSHLA 264
           G +    L ++G + + G      LG           ++   +P       +  L  +  
Sbjct: 194 GPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNI 253

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V V   +  + V+   G +  FG   +G LG  D    ++     +  SL   +V++++ 
Sbjct: 254 VAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGD--FKERKTVTMVTGSLVGKNVTKVAC 311

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLG 350
           G   TV+ T    ++  G +E  +LG
Sbjct: 312 GDRSTVIATSDNLIYSCGFSENGRLG 337



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 143 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGHGEQHDEL 197
           + TP+ +    +  S +Q++AG ++   VT    +Y++ +          LGHG+     
Sbjct: 8   KLTPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYK 67

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----KTLP 253
            P+ ++   +  I V +VS G++  V +   G VY++G  Y G LG+GD+ D       P
Sbjct: 68  APKRVEALDK--IAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSP 125

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
             +S   +   +QV         L   G VY +G   FG LG    G  D    P+ + +
Sbjct: 126 SLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGI---GTEDDHSSPQKVAT 182

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              H +  +  G   + ++   GRL   G NE  +LG ++    L   ++
Sbjct: 183 RGRHGIRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQV 232



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 19/180 (10%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS+G G            +L P+ ++ F  KG   ++VSAG  H   +     +YTW  
Sbjct: 1   VYSWGGG------------KLTPQQLEVFT-KGHSALQVSAGHAHFAVVTVERELYTWAN 47

Query: 237 G-----YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
                   G LGHGD      P+ + +L      QV   +  T  + D G+VY FG   +
Sbjct: 48  AQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYY 107

Query: 292 GSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G LG  D+G   D    P ++       V Q+S G  H + +T  G ++ +G  E  +LG
Sbjct: 108 GCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLG 167



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++  +V+S GS   G LG+G     E   C S + ++F     V+QVS
Sbjct: 82  QVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCAC-SPSLVSFFVNRPVLQVS 140

Query: 57  ASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
             + H   + + G+V+T G         G  D +     P+ V        + V AG + 
Sbjct: 141 CGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSS---PQKVATRGRHGIRSVHAGPDG 197

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGD----------TLDRPTP---KSIAPLEEVGSVVQI 161
           +  L   G + +CGSN H +LG             + D P      ++ PL +  ++V +
Sbjct: 198 SFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKY-NIVAV 256

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           + G ++   + G G + +FGS     LG G+   E +   + T    G +V +V+ GD  
Sbjct: 257 SPGQTHSAVIDGFGHLITFGSNKYGQLGVGD-FKERKTVTMVTGSLVGKNVTKVACGDRS 315

Query: 222 VVALDSSGYVYTWGKGYCGALG 243
            V   S   +Y+ G    G LG
Sbjct: 316 TVIATSDNLIYSCGFSENGRLG 337



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 20/205 (9%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G  H + L     V++ GS   G LG G E     S  ++       +  V A  
Sbjct: 137 LQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHS-SPQKVATRGRHGIRSVHAGP 195

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK------------- 106
           + +  +  +G++ +CG N     G     + +   R  +    +PC              
Sbjct: 196 DGSFILRTNGRLQSCGSNEHNKLGLNSCAKGL---RSKQVSYDIPCNYNFTTVKPLSKYN 252

Query: 107 --QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
              V+ G   +  +   GH+ T GSN +GQLG GD  +R T   +       +V ++A G
Sbjct: 253 IVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACG 312

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLG 189
               +  T + ++YS G   N  LG
Sbjct: 313 DRSTVIATSDNLIYSCGFSENGRLG 337


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 132 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 185 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 239
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 360 PTEIFI 365
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 33/311 (10%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  ++L I+ +  +F+ G +  G LGH   T      +++   S   +VQ +    H
Sbjct: 43  VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQ 107
              V   G+ +  G N    CG       +T RP  R         P+L+        +Q
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQ 155

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           V AG   +  LT  GHV T G         GD      P  +  L+    V  IA G  +
Sbjct: 156 VAAGGTHSVVLTREGHVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFH 208

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            LA+  +G ++++G+     LG G+     QP  +Q     G+ +V ++AG  H  AL  
Sbjct: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTD 266

Query: 228 SGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           +G VY WG+G  G LG G  D+  K +P+ +  L     VQ+      +  +   G ++ 
Sbjct: 267 NGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFS 326

Query: 286 FGWMGFGSLGF 296
           FG    G LG+
Sbjct: 327 FGRGDHGRLGY 337


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 29/316 (9%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           VFT G  +    GH    +   R       PR++E  +G    ++  G   +  +   G 
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGK 66

Query: 124 VHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++T GSN + QLGHG +    +  P+ +  L  +  +V I+ G  +  AV   G ++++G
Sbjct: 67  LYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGI-KIVDISCGEYHTGAVDEEGKLFTWG 125

Query: 182 SGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            G +       LGH    DE  PR ++T   +G+ V  V  G+ H VAL   G ++ WG 
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGN 185

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LG+G   +  +PEP+          + A +  TF + + G VY +G      LG 
Sbjct: 186 GEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGL 245

Query: 297 PDRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
                 D       P ++++L   +V+Q+S G  H   VT+ G++F +G    A+L    
Sbjct: 246 GGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG----AKL---- 297

Query: 354 LRGCLEPTEIFIQEME 369
               LEP E+ I + E
Sbjct: 298 ---WLEPHEMTILKDE 310



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 118 LTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAP--LE--EVGSVVQIAAGPSYMLA 170
           ++ +  V T G+ T GQLGHG    T  R + + ++P  LE  E  ++ ++  G ++  A
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +   G +Y++GS     LGHG  + ++Q  PR +   R  GI +V +S G+ H  A+D  
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALR--GIKIVDISCGEYHTGAVDEE 118

Query: 229 GYVYTWGKG-----YCGALGHGDEIDKTLPEPLSSLKSH-LAVQ-VCARKRKTFVLVDTG 281
           G ++TWG G       GALGH    D+++P  + +L    + V+ V   +  T  L   G
Sbjct: 119 GKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDG 178

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            ++ +G   +G LG    G SD    P  ++     +++ IS G   T  +T+ G ++ +
Sbjct: 179 EIWAWGNGEYGRLG---NGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSW 235

Query: 342 GDNERAQLG 350
           G N  +QLG
Sbjct: 236 GINSHSQLG 244



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 131/324 (40%), Gaps = 64/324 (19%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 59
           ++  G  H+  I     +++ GS+    LGHG       S  R+ +      +V +S  E
Sbjct: 50  KLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGE 109

Query: 60  NHAAFVLQSGQVFTCGDNSSF-----CCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGL 112
            H   V + G++FT G   S        GH         PRLV  L  +GVP K V  G 
Sbjct: 110 YHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESI-PRLVRTLVDQGVPVKSVECGE 168

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             T  LT  G +   G+  +G+LG+G  D  + P P      E + S   I+AG  +  A
Sbjct: 169 LHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIAS---ISAGRDFTFA 225

Query: 171 VTGNGVVYSFG--SGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           +T +G VYS+G  S S   LG G   D    E  P  ++      ++V +VSAG +H  A
Sbjct: 226 ITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSN--VNVAQVSAGYDHAAA 283

Query: 225 -----------------------------------------LDSSGYVYTWGKGYCGALG 243
                                                    L +SG ++T+GKG+   LG
Sbjct: 284 VTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLG 343

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQV 267
           HG+   +  P  + SL  +  V +
Sbjct: 344 HGERKTQLQPLLVESLNRYNVVSM 367



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 21/229 (9%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ L  +  +++ G+   G LG+G      V    + + +  ++  +SA  + 
Sbjct: 164 VECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVP-EPVEYFADENIASISAGRDF 222

Query: 62  AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
              + + G+V++ G NS    G       D       P +VEAL  V   QV+AG +   
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +T  G +   G+    +           P  +  L++  +++ +  G  Y  A++ +G 
Sbjct: 283 AVTNDGKMFMWGAKLWLE-----------PHEMTILKDE-TIISVQCGRYYTAALSASGN 330

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +++FG G + CLGHGE+  +LQP  +++  R   +VV ++ G  H+ AL
Sbjct: 331 LFTFGKGHSNCLGHGERKTQLQPLLVESLNR--YNVVSMTCGYSHMGAL 377


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  117 bits (294), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 166/354 (46%), Gaps = 22/354 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G YHT  L+S+  V+S G    G LG+G   T     T +      HV+ V     
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG---TWSARTTPVMAKGLNHVIDVHTGVR 93

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 119
               +   G V+T G N +   G   T   +  P  V  L G+  K V+ GL +    L+
Sbjct: 94  STMALRSDGTVWTWGSNENGQLG-IGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALS 150

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G N +G+LG+G TL + TP  +A L +V +   IAAG  + LA+  +G V++
Sbjct: 151 EDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTA---IAAGGYFSLALKSDGTVWA 207

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WGK   
Sbjct: 208 WGVNGDGELGDGTTTDRYVPVQVAGL----TDVMAIAAGGSHSLAVTQDGTVWAWGKNTY 263

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   ++T P  + +L+ H+ V V      +  L  TG+V+ +G      LG    
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQ-HI-VAVAGGGYHSLALDRTGNVWSWGDNSQRQLGV--- 318

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G +   L P  +  +   HV +I+ G +H+V +   G ++G+G N   QLG  T
Sbjct: 319 GSNASSLIPVPVSGI--EHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A ++ SG+V++ G       G+  T      P + + L  V    V  G+  T  L  
Sbjct: 44  HTASLVSSGEVYSWGYGDRGQLGN-GTWSARTTPVMAKGLNHV--IDVHTGVRSTMALRS 100

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLAVTGNGVVYS 179
            G V T GSN +GQLG G   D   P  ++ L  + +V   + G  Y  +A++ +G V++
Sbjct: 101 DGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAV---SGGLGYHSMALSEDGSVWT 157

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   N  LG+G    +  P  +         V  ++AG    +AL S G V+ WG    
Sbjct: 158 WGKNDNGELGNGTTLQQNTPVQVAGLN----DVTAIAAGGYFSLALKSDGTVWAWGVNGD 213

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D+ +P  ++ L   +A+   A    +  +   G+V+ +G   +G+LG    
Sbjct: 214 GELGDGTTTDRYVPVQVAGLTDVMAI--AAGGSHSLAVTQDGTVWAWGKNTYGTLG---D 268

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G      RP  + +L+  H+  ++ G YH++ +   G ++ +GDN + QLG  +    L 
Sbjct: 269 GTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLI 326

Query: 360 PTEI 363
           P  +
Sbjct: 327 PVPV 330



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 14/247 (5%)

Query: 8   YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           YH++ +S + SV++ G +  G LG+G    Q    T +       V  ++A    +  + 
Sbjct: 144 YHSMALSEDGSVWTWGKNDNGELGNGTTLQQN---TPVQVAGLNDVTAIAAGGYFSLALK 200

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G V+  G N     G   T    + P  V  L  V    + AG + +  +T  G V  
Sbjct: 201 SDGTVWAWGVNGDGELGD-GTTTDRYVPVQVAGLTDV--MAIAAGGSHSLAVTQDGTVWA 257

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G NT+G LG G   +R  P  I  L+ +   V +A G  + LA+   G V+S+G  S  
Sbjct: 258 WGKNTYGTLGDGTRTNRTRPVQIKNLQHI---VAVAGGGYHSLALDRTGNVWSWGDNSQR 314

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG G     L P  +        HV  ++AG  H VA+   G V+ WG    G LG G 
Sbjct: 315 QLGVGSNASSLIPVPVSGIE----HVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370

Query: 247 EIDKTLP 253
              +  P
Sbjct: 371 SSTRDTP 377


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  117 bits (294), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 102/353 (28%), Positives = 159/353 (45%), Gaps = 18/353 (5%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           Y   L S+ +V++ G    GVLG+G      V +   +      V Q+SA E H+  +  
Sbjct: 647 YSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDLTG---VEQISAGEGHSLALRS 703

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G  +  GDN+    G+  T      P  V  L GV    V AG   +  L   G V   
Sbjct: 704 DGTAWAWGDNAYGMLGNNSTVTSSI-PVQVSGLTGV--SSVKAGRLHSMALKSDGTVWAW 760

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G NT GQLG G T  R  P  ++ LE+V   + I+AG  + + +  +G V+++G  SN  
Sbjct: 761 GYNTEGQLGDGSTTQRLVPVQVSGLEDV---IAISAGDYHSMVIKSDGTVWAWGRNSNGQ 817

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG+      L P  +Q     G+ ++  SAG     A+ S G    WG    G L  G  
Sbjct: 818 LGNNSTTGSLVP--VQVPGLTGVALI--SAGTNTSAAVKSDGTALAWGSNTYGQLCDGSN 873

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
           I + +P  +S      A+ +      + +L   G+V+G G   +G +G  +  ++D  + 
Sbjct: 874 IQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIG--NNSITDSKVP 931

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              + +L    V  IS GLYH++ +   G ++G+G N   QLG ++    L P
Sbjct: 932 ---VQTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981



 Score =  105 bits (261), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 23/354 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G YH L L S+ +V++ G +  G LG G    + V    +       V  +SA+  
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVP---VQVSGLTEVSAISAAFG 328

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G ++T G N+    G+    + +     V+ L GV    ++AG +++  +  
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVP---VQVLTGV--ASISAGYDYSLAVKS 383

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP-SYMLAVTGNGVVYS 179
            G V   G N +GQ G+  T+D   P  ++ L  V S+   ++   S+ LA+  +G V+ 
Sbjct: 384 DGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWG 443

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S   LG+      L P  +Q     G  VV +SAG  H +AL S G  + WG    
Sbjct: 444 WGYNSTGQLGNNSATQSLVP--VQALGLTG--VVSISAGSNHSMALKSDGTAWIWGGNSD 499

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG+       +P  +  L    A+   A    +  L   G+V+ +G    G LG    
Sbjct: 500 GQLGNNSTAQSLVPVQVPGLSGVSAIS--AGNYHSMALKSDGTVWAWGRNSSGQLGNNST 557

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            VS  ++  ++L        + +S G YH++ +   G ++G+G+NE  ++  +T
Sbjct: 558 TVS--LVPIQVLTG-----TTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNT 604



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 35/379 (9%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H++ L S+ + +  G +  G LG+   T Q  S   +  P  + V  +SA  
Sbjct: 473 VSISAGSNHSMALKSDGTAWIWGGNSDGQLGNN-STAQ--SLVPVQVPGLSGVSAISAGN 529

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G V+  G NSS   G+  T   +     ++ L G     V+AG   +  L 
Sbjct: 530 YHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVP---IQVLTGT--TSVSAGTYHSMALK 584

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------------PLEEVGSVVQIAAGP 165
             G V   G+N + ++     LD+  P   A                +E+ S+   + G 
Sbjct: 585 SDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGS 644

Query: 166 -SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             Y LA+  +  V+++G G +  LG+G     L    +    R    V ++SAG+ H +A
Sbjct: 645 YGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPV----RDLTGVEQISAGEGHSLA 700

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           L S G  + WG    G LG+   +  ++P  +S L    +V+  A +  +  L   G+V+
Sbjct: 701 LRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVK--AGRLHSMALKSDGTVW 758

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G+   G LG    G + + L P  +  L    V  IS G YH++V+   G ++ +G N
Sbjct: 759 AWGYNTEGQLG---DGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGTVWAWGRN 813

Query: 345 ERAQLGHDTLRGCLEPTEI 363
              QLG+++  G L P ++
Sbjct: 814 SNGQLGNNSTTGSLVPVQV 832



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 16/259 (6%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV AG      L   G V   G N +G+LG G T++R  P  ++ L EV +   I+A   
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSA---ISAAFG 328

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + +A+  +G ++++G  +   LG+      L P  + T       V  +SAG ++ +A+ 
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVLT------GVASISAGYDYSLAVK 382

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR--KTFVLVDTGSVY 284
           S G V+ WG+ Y G  G+   ID  +P  +S L    ++   +      +  L   G+V+
Sbjct: 383 SDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVW 442

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G+G+   G LG      + + L P  + +L    V  IS G  H++ +   G  + +G N
Sbjct: 443 GWGYNSTGQLG---NNSATQSLVP--VQALGLTGVVSISAGSNHSMALKSDGTAWIWGGN 497

Query: 345 ERAQLGHDTLRGCLEPTEI 363
              QLG+++    L P ++
Sbjct: 498 SDGQLGNNSTAQSLVPVQV 516


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 24/337 (7%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3627

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 176
            +T  G + T G+  +G+LG G+T ++  P+            ++A G ++ LAV+ +G +
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSADGSM 3734

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                 L  G   +   P+ +  L   +   V      T  L  TG VY +G    G LG 
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3853 ---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 3886



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 457

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 458 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 515

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 516 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 571

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 572 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 631

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  IS G  H + ++    +
Sbjct: 632 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 685 YAWGNNSMGQCGQ 697



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 697 QGNSTGPITKPKKVSGLDGIAIQQISA 723



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 24/324 (7%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3562 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3619

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3620 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3678

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P              RV+ G  H 
Sbjct: 3679 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-------------RVACGLNHT 3725

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3726 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 3785

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3786 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 3842

Query: 342  GDNERAQLGHDTLRGCLEPTEIFI 365
            G N   QLG        EPT + +
Sbjct: 3843 GSNSEGQLGLGHTNHVREPTLVTV 3866



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3537 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3591

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3592 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3651

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3652 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3709

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
            S+K L  R            ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3710 SNKKLPER------------VACGLNHTLAVSADGSMVWAFGDGDYGKLG 3747



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 427

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 428 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 486

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 487 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 543



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3537 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3593

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3594 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3650

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 3651 KLGHGNSDRQRRPRQIEALQGEE 3673



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 152/335 (45%), Gaps = 12/335 (3%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SE 59
           Q+  G+Y T  I  + SV +CG    G LG G  + Q +   RI        +  S  S+
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLP-KRILLDCVVKKLSSSKGSD 441

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   + ++G V++ GD      GH +        R+     G   K + AG   +  +T
Sbjct: 442 GHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVY 178
             G ++T G   HG+LGHGD+  R  P  +A L EVGSV   A G S+ L V+ +G  V+
Sbjct: 502 DDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV---ACGSSHTLVVSKDGKTVW 558

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           SFGSG +  LG GE     +P+ ++    +G+ + +V AG    +AL ++G VYTWG G 
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEAL--QGLTIQKVCAGTWFSMALTTAGEVYTWGSGA 616

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
               G  D I   LP  +  L  +  V + A       L D   V+ +G    G  G   
Sbjct: 617 ILGKGSADAI-VNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCG--Q 673

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
                 + RP  +  L    + QIS G  H++  T
Sbjct: 674 GHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWT 708



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 15/343 (4%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           MQ+ +G+Y    I +       SS   V        + ++   I+F      V+ + SE+
Sbjct: 285 MQLESGKYK---IKSDLWKGQTSSEVSVYEAAINLMEILAGMAIDFGGVCSAVE-TTSES 340

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
               V +   V+  G NSS      +  + I  P  V++      +QV AG   T  +  
Sbjct: 341 EVG-VYEKSDVYVWGSNSSHQLAEGNQEK-ILMP--VKSKMFTQVQQVEAGQYCTFAIHW 396

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V  CG  ++G+LG G++ ++  PK I     V  +        + LA+   GVVYS+
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSW 456

Query: 181 GSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G G    LGHG      QP  I   F  K I  +   AG  H  A+   G +YTWG+G  
Sbjct: 457 GDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIH--AGYRHSAAVTDDGKLYTWGEGDH 514

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD   + +P  ++ L + +    C       V  D  +V+ FG    G LG  + 
Sbjct: 515 GRLGHGDSNARYVPTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGEL 573

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           G   KV RP+++++L+   + ++  G + ++ +T  G ++ +G
Sbjct: 574 G---KVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG 613



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 158/368 (42%), Gaps = 28/368 (7%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            +I  G+  T +I S+ +V +CG    G LG G  +    S + I+      +  ++ S  
Sbjct: 3361 KIICGQNCTFVIQSDGTVLACGEGSYGRLGQG-NSDDLHSLSVISSLQGFVITDLATSVG 3419

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH + +R   RPR +EAL+     QV  G   +  
Sbjct: 3420 SDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQVVQVACGFKHSAV 3478

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+   G+LG G   ++  P+ +  LE   +G   Q+A G ++   V+ +G
Sbjct: 3479 VTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIG---QVACGLNHTACVSTDG 3535

Query: 176  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            + V++FG G    LG G    +L P+ ++T    GI   +V  G    + L   G V+  
Sbjct: 3536 MTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK--KVGCGTHLTLFLTKDGKVFVC 3593

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G           E     P+ ++SL  +    +         L   G V G+G  G G L
Sbjct: 3594 GIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQL 3653

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-----------DRGRLFGFGD 343
            G P   +   V  P I+  L    + QISTG  H+   +            R   FG   
Sbjct: 3654 GLPHVSL---VRHPEIITELSDKGIRQISTGRTHSAAWSAPPLPQRVPGVTRSLTFGLPA 3710

Query: 344  NERAQLGH 351
            N  +Q  H
Sbjct: 3711 NIPSQYDH 3718



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 8/240 (3%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 163
            +++  G N T  +   G V  CG  ++G+LG G++ D  +   I+ L+   +  +     
Sbjct: 3360 RKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG 3419

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
               + LA+  +G V+S+G G    LGHG    + +PR I+  + +   VV+V+ G +H  
Sbjct: 3420 SDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTE--QVVQVACGFKHSA 3477

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 282
             + S G ++T+G G  G LG G   +K LPE + +L+ +   QV C       V  D  +
Sbjct: 3478 VVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTDGMT 3537

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            V+ FG   +G LG    G +   L P+ ++++    + ++  G + T+ +T  G++F  G
Sbjct: 3538 VWTFGEGDYGKLGL---GYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCG 3594



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 13/236 (5%)

Query: 125  HTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            +  GS+ HGQL   G +   P       +E      +I  G +    +  +G V + G G
Sbjct: 3330 YMWGSDRHGQLAELGYSASVP-----VQVESFSIARKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 184  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 242
            S   LG G   D      I + +   I  +  S G D H +AL  SG V++WG G  G L
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKL 3444

Query: 243  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
            GHG+   +  P  + +L++   VQV    + + V+   G ++ FG   FG LG     V+
Sbjct: 3445 GHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL--GSVA 3502

Query: 303  DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR---LFGFGDNERAQLGHDTLR 355
            +K L  R++ +L  + + Q++ GL HT  V+  G     FG GD  +  LG+ T++
Sbjct: 3503 NKKLPERVM-ALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMK 3557



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 11/190 (5%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   L P   + F +    V +V AG     A+   G V   GK
Sbjct: 350 VYVWGSNSSHQLAEGNQEKILMPVKSKMFTQ----VQQVEAGQYCTFAIHWDGSVSACGK 405

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFGS 293
           G  G LG G+  +++LP+ +  L   +  ++ + K     T  L +TG VY +G   +G 
Sbjct: 406 GSYGRLGLGESSNQSLPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGK 463

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  +     +    RI        +  I  G  H+  VTD G+L+ +G+ +  +LGH  
Sbjct: 464 LGHGNCATHKQ--PERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521

Query: 354 LRGCLEPTEI 363
                 PT++
Sbjct: 522 SNARYVPTQV 531


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 282 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNTELVACG 340

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 341 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 399

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 226
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 400 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 457

Query: 227 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 458 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 517

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 335
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 518 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 573

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPT 361
             ++ +G     +LGH  +     PT
Sbjct: 574 TEIYTWGKGANGRLGHGDVEDRTAPT 599



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 337 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 395

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 396 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 454

Query: 119 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 455 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 513

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 514 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 571

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 572 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 605



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 392 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 450

Query: 62  AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 509

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 510 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 568

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V
Sbjct: 569 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTV 612



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 211
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 331 GVNTEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 388

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 389 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 448

Query: 272 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 449 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 505

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 368
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 506 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 560



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 4/176 (2%)

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 261 GAGSRVDSLVPKALQAA--VVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 318

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-MGFGSLGFPDRGVSDKVLR 307
           D + P+ + +L       V      T  +  +G +Y +G     G L      VS  + +
Sbjct: 319 DVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 378

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 379 -RMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 433


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 31/355 (8%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            +V++ G    G LG   E  Q  S   +   S  ++++V A+++ +  + Q G+V+T G
Sbjct: 43  KTVYAWGYGNFGQLGLANENNQ-YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101

Query: 76  DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
            N     GH D T+  + +P LVE L+ +  KQ++ G      ++  G ++T G+  HG+
Sbjct: 102 KNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGK 161

Query: 135 LGH--------------GDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LGH                  D       P  +  L  +    Q++ G  + + +T NG 
Sbjct: 162 LGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGI-KCKQVSCGGQFTVVLTENGE 220

Query: 177 VYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           VYSFG+     LG+  E+    QP+ I   +    +++ +  G +   A+ SSG VYTWG
Sbjct: 221 VYSFGNSMKGQLGYQSEETGNFQPKKIPDLQ----NIINIDCGQQFSAAVSSSGKVYTWG 276

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG+   I +  P  ++    +  + +         L + G ++ +G+   G LG
Sbjct: 277 NNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLG 336

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             +R   + +  P+ ++      + ++  G  HT  +T   +L+ FG     QLG
Sbjct: 337 HSNR---NDLYAPKQIEF--KEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G++  +L  N  V+S G+S+ G LG+  E T   +F     P   +++ +   +  +A V
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETG--NFQPKKIPDLQNIINIDCGQQFSAAV 266

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
             SG+V+T G+N     G    N+ I+  RP  V    G     ++ G NF   L+  G 
Sbjct: 267 SSSGKVYTWGNNDH---GQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           + T G    GQLGH +  D   PK I   E+   ++++  G ++   +T N  +Y FG G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIEFKEK---IIKVDCGGTHTAFLTQNNQLYLFGRG 380

Query: 184 SNFCLGHGEQHD-----ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +   LG GE  +        P+ ++ F++  + VV V+ G E+ +A+
Sbjct: 381 NEGQLGIGENIESEAAIRTTPKIVEFFKK--MKVVDVTCGGEYTLAI 425



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 29/297 (9%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSI 149
           + P+ VE L      +V A  + +  L+  G V+T G N  G LGH D  + +   P+ +
Sbjct: 65  YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELV 124

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE------------- 196
             LE +  + QI+ GP +M A++ +G +Y++G+  +  LGH  Q                
Sbjct: 125 EKLENI-QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYD 183

Query: 197 -----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDK 250
                + P  +Q+    GI   +VS G +  V L  +G VY++G    G LG+  +E   
Sbjct: 184 YAEGSMLPTKVQSLN--GIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGN 241

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             P+ +  L++ + +  C ++    V   +G VY +G    G LG      S    RP  
Sbjct: 242 FQPKKIPDLQNIINID-CGQQFSAAV-SSSGKVYTWGNNDHGQLG---NNQSIYQARPNQ 296

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           +     + +  IS G      +++ G+LF +G     QLGH        P +I  +E
Sbjct: 297 VTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE 353



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VY++G G+   LG   ++++  P+ ++    +  ++++V A     +AL   G VYTWG
Sbjct: 44  TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDR--NIIKVKANKSVSMALSQDGKVYTWG 101

Query: 236 KGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           K   G LGH D    +   PE +  L++    Q+         +   G +Y +G    G 
Sbjct: 102 KNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGK 161

Query: 294 LGFPDRGVSDKV---------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           LG   +  S+KV               + P  + SL      Q+S G   TVV+T+ G +
Sbjct: 162 LGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEV 221

Query: 339 FGFGDNERAQLGHDTLR-GCLEPTEI 363
           + FG++ + QLG+ +   G  +P +I
Sbjct: 222 YSFGNSMKGQLGYQSEETGNFQPKKI 247


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  117 bits (293), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 287
           ++G+   G LG       + + P+ + SL S L V  C  K    +  D    +G   FG
Sbjct: 212 SFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
            +G G+L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGTLVF----VADS---PVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 348 QLGH 351
           +LGH
Sbjct: 324 KLGH 327



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 60
           +  G  HTL+  S   + + G +  G LG G      +SF R+  F   A +  +SA ++
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+ G   +  +T 
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PK--ELNMGQSIHWVSCGYRHSALVTD 206

Query: 121 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G V++ G +  G+LG       +   P+ +   E + SV+Q+A G  + LA+T + + Y
Sbjct: 207 SGDVYSFGESADGRLGLSAHQLANHSYPQRV---ESLHSVLQVACGGKHTLALTEDEL-Y 262

Query: 179 SFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            FG G    LG G        P A+  FR+    V  V+ G++H   +  SG +YT+G G
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFRKG--RVTHVTCGEQHSALITDSGLLYTFGDG 320

Query: 238 YCGALGHGDE 247
             G LGHGDE
Sbjct: 321 RHGKLGHGDE 330



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-KELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 72  FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           ++ G+++    G   H+  N     P+ VE+L  V   QV  G   T  LT    ++  G
Sbjct: 211 YSFGESADGRLGLSAHQLANHSY--PQRVESLHSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 129 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
               GQLG G       +P ++    + G V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 188 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.031,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 333 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPKEL 185


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 80  FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 196
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 255
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 287
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 132 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 186 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 361 TEIFI 365
            E+ I
Sbjct: 346 LELPI 350


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 93  RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 210
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 269
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 330 VVVTDRGRLFGFGDNERAQL 349
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 172 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 287 G 287
           G
Sbjct: 312 G 312



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 166
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 226 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 282
             +G  + WG    G L   G+++ + + +P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 342 G 342
           G
Sbjct: 312 G 312



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 267
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 328 HTVVVTDRGRLFGFGDNERAQLG 350
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 93  RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 210
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 269
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 330 VVVTDRGRLFGFGDNERAQL 349
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 172 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 287 G 287
           G
Sbjct: 312 G 312



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 166
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 226 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 282
             +G  + WG    G L   G+++ + + +P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 342 G 342
           G
Sbjct: 312 G 312



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 267
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 328 HTVVVTDRGRLFGFGDNERAQLG 350
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 80  FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 196
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 255
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 287
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 166/364 (45%), Gaps = 23/364 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L S+ +V++ G++  G LG G  T + V    +     + VV + A  
Sbjct: 189 VAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVL-----SGVVAMEAGS 243

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            ++  V   G V+  G N S   G  DT      P  V  L  V    V AG + +  L 
Sbjct: 244 GYSLAVRNDGTVWAWGYNFSGQLGD-DTVTSRSTPVQVLGLSEVVA--VAAGSSLSLALR 300

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   GSN +GQ G G T +R  P     L      V +AAG ++ LAV  +G V++
Sbjct: 301 SDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS---GGVAVAAGYAHSLAVRSDGTVWA 357

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GS ++  LG G   +  +P  +Q        VV VSAG    +A+ S G V+ WG    
Sbjct: 358 WGSNASGQLGEGTTSNRSEPVQVQGLS----GVVAVSAGASSSLAIRSDGTVWAWGSNAS 413

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   D+ +P  +  L   +A  V A    +  + + G+V+G+G+ G+G LG    
Sbjct: 414 GQLGDGTTTDRLVPVQVQGLSGVVA--VVAGTSFSLAVRNDGTVWGWGYNGYGQLGTF-- 469

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             S  VL P  +  L    V  ++ G  H++ V   G ++  G N+  QLG  +      
Sbjct: 470 -TSLFVLVPVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA 526

Query: 360 PTEI 363
           P ++
Sbjct: 527 PVQV 530



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ +V++ GS+  G LG G  + +      +     + VV VSA  
Sbjct: 337 VAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS---EPVQVQGLSGVVAVSAGA 393

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           + +  +   G V+  G N+S   G   T   +  P  V+ L GV    V AG +F+  + 
Sbjct: 394 SSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSGVVA--VVAGTSFSLAVR 450

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N +GQLG   +L    P  +  L     VV +AAG  + LAV  +G V++
Sbjct: 451 NDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLS---GVVAVAAGNLHSLAVRSDGTVWA 507

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            G   N  LG G   +   P  +Q     G  VV V+AGD H +A+   G V+ WG    
Sbjct: 508 LGRNDNGQLGDGSWTNRSAP--VQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAWGYNSF 563

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    ++ P  ++ L    +  V A    +  +   G+V+ +G+  +G LG  D 
Sbjct: 564 GQLGDGSWFQRSAPVQVTGLSGRGS--VAASSDYSMAVRYDGTVWAWGFNLYGQLG--DG 619

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             S   L P  +  LR   V  +  G  H++ +   G ++ +G N   QLG+
Sbjct: 620 TTSSNQLVPVQVQQLRG--VVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGN 669



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 131/299 (43%), Gaps = 25/299 (8%)

Query: 69  GQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           G V+  G+N S     G RD      R   V+ L         AG   +  L   G V  
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDN-----RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWA 59

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N +GQLG+G    R  P  +  L      V + AG  + LAV  +G V+++G   N 
Sbjct: 60  WGYNGYGQLGNGSLGSRAEPVQVQGLS---GGVSVDAGHYHSLAVRDDGTVWAWGDNPNG 116

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG G     L P  +Q        VV V+AG  H +AL S G V+ WG    G LG G 
Sbjct: 117 QLGEGTTTRRLVPVQVQGLS----EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGT 172

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
             ++ +P P+  L   +AV+  A    +  L   G+V+ +G    G LG    G + K L
Sbjct: 173 TTNRLVPVPVLGLSEVVAVE--AGSSHSLALRSDGTVWAWGANASGQLG---DGTTTKRL 227

Query: 307 RP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            P ++L  + A     +  G  +++ V + G ++ +G N   QLG DT+     P ++ 
Sbjct: 228 VPVQVLSGVVA-----MEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVL 281



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 91/202 (45%), Gaps = 13/202 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTA 110
           VV V+A   H+  V   G V+  G N +   G    TNR    P  V  L GV    V A
Sbjct: 486 VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA--PVQVTGLSGVVS--VAA 541

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G + +  +   G V   G N+ GQLG G    R  P  +  L   GSV   AA   Y +A
Sbjct: 542 GDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV---AASSDYSMA 598

Query: 171 VTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           V  +G V+++G      LG G    ++L P  +Q  R     VV V  G  H +AL S G
Sbjct: 599 VRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLR----GVVAVEVGSSHSLALRSDG 654

Query: 230 YVYTWGKGYCGALGHGDEIDKT 251
            V+TWG    G LG+G  +  T
Sbjct: 655 TVWTWGYNSFGQLGNGPPLYAT 676


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 143/300 (47%), Gaps = 11/300 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           +++S  + H A V ++G++F  G N+    G   T   + +P  V+AL+    K    G 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALRSERVKLTACGR 97

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A+T
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G +Y  G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G +Y
Sbjct: 158 QDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           T+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG   
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTEN-EVYSFGLGQ 271

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG        ++  PR+++  R   V   + G  HT ++TD G L+ FGD    +LG
Sbjct: 272 FGQLGHGTFIFESRL--PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 55
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 113
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 172
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 173 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 231 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 290 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 277
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 338 LFGFGDNERAQLGHDTLR 355
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 8/185 (4%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G  +  D     A   F  K    +R+S GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFAD----NAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67

Query: 242 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G LG  D  
Sbjct: 68  LGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G       L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTP 184

Query: 361 TEIFI 365
            E+ +
Sbjct: 185 QEVSV 189


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 6/268 (2%)

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           G   + C GH       + P+ +++LK     QV  G      L   G +++ G   +G+
Sbjct: 3   GTGFNLCLGHGSHANEKY-PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGR 61

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LGHG+  D   PK +A  ++  + VQIA G ++   +T +G +YS+G G N  LG+GE+H
Sbjct: 62  LGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERH 121

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D+  P  +   R + + V  V+ G     A    G +++WG G  G LG GD  D+  P 
Sbjct: 122 DQWTPNLV--LRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPS 179

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +   +    ++V   +     L + G ++G+   G G+ G    G + +VL P  L   
Sbjct: 180 LVRLREEDRIIRVACGEHHCLALTEDGKLWGW---GRGTGGCHGLGHTSEVLSPHKLPMP 236

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFG 342
               +  +S G +H+  +T RG +F FG
Sbjct: 237 EDRTIVSMSCGRWHSAYLTIRGDIFCFG 264



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 10/271 (3%)

Query: 19  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
           +  G +LC  LGHG    +      I       V+QV+    H + +  SGQ+++ G   
Sbjct: 2   WGTGFNLC--LGHGSHANEKYP-KPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
           +   GH +         L    K     Q+  G   + +LT  G +++ G   +G+LG+G
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
           +  D+ TP  +  L ++  V  +A G +   A TG G+++S+GSG + CLG G++ D L+
Sbjct: 119 ERHDQWTPNLVLRLRDL-VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE 177

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 256
           P  ++   R+   ++RV+ G+ H +AL   G ++ WG+G   C  LGH  E+      P+
Sbjct: 178 PSLVRL--REEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPM 235

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
              ++ +++  C R    ++ +  G ++ FG
Sbjct: 236 PEDRTIVSMS-CGRWHSAYLTI-RGDIFCFG 264



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 6/193 (3%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G+G N CLGHG   +E  P+ I++ + KG  V++V+ G +H  AL SSG +Y+WG G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG--VIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            G LGHG+  D + P+ L+S K +  AVQ+      +  L   G +Y +G    G LG  
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           +R        P ++  LR   VS ++ G   T   T  G LF +G  +   LG       
Sbjct: 119 ER---HDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDR 175

Query: 358 LEPTEIFIQEMEE 370
           LEP+ + ++E + 
Sbjct: 176 LEPSLVRLREEDR 188


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 34/363 (9%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTC 74
           V+S G +  G L  G +TT   +  R++  ++ H   VV V+      A + + G V+TC
Sbjct: 33  VYSFGQNTYGELALG-DTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91

Query: 75  GDNSSFCCGHRDTNR-PIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           G N S  C    T R P  R        R V    G   + + A       L   G+++T
Sbjct: 92  GYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAA-------LHANGNLYT 144

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVYSFGSGS 184
            G N  GQLG G +    T      +EE+        G SY     V  NG +Y+ G   
Sbjct: 145 VGFNMRGQLGLGSS---TTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCND 201

Query: 185 NFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              LG G+  + EL PR ++ F R+   V+ V+ G  + +A    G V  +GK   G LG
Sbjct: 202 YGQLGLGDHRNGELVPRPVEYFFRR--PVLAVACGQHYTIASLRDGGVVAFGKNDHGQLG 259

Query: 244 HGDEIDKTLPEP--LSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
             D   + + +P  L++    L V Q+      T V+ + G+VY FG   +G LG    G
Sbjct: 260 L-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGL---G 315

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
               + RP  ++SL    ++Q++ G YHT+V++D G++F FG N   QLG +T   CL P
Sbjct: 316 HKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSP 375

Query: 361 TEI 363
             I
Sbjct: 376 QLI 378



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 19/328 (5%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE--NHAAFVL 66
           +L  +  V++CG +  G    G  TT+ V   R + P  S+   V++ +     H A + 
Sbjct: 81  ILFEDGDVYTCGYNDSGQCAIG--TTERVPTLRFS-PGLSSNRTVRIFSGNGSEHLAALH 137

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
            +G ++T G N     G   ++  +    LVE L G     V      T  +   G ++ 
Sbjct: 138 ANGNLYTVGFNMRGQLG-LGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYA 196

Query: 127 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           CG N +GQLG GD  +    P+   P+E      V+ +A G  Y +A   +G V +FG  
Sbjct: 197 CGCNDYGQLGLGDHRNGELVPR---PVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKN 253

Query: 184 SNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            +  LG     + + QP  +     + + V ++S G  H   +   G VYT+G+   G L
Sbjct: 254 DHGQLGLDSTSEPVSQPTRLAAPLDRLV-VPQLSCGYHHTAVVTEDGAVYTFGRNDYGQL 312

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G G ++    P  + SL      QV      T VL D G V+ FG    G LG      S
Sbjct: 313 GLGHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLE---TS 369

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTV 330
              L P+++ +LR   V++++ G YH+V
Sbjct: 370 VDCLSPQLISTLRNKTVTKVAAGFYHSV 397



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 8   YHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +HT +++ N  +++CG +  G LG G      +    + +     V+ V+  +++    L
Sbjct: 183 FHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASL 242

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           + G V   G N     G   T+ P+ +P RL   L  +   Q++ G + T  +T  G V+
Sbjct: 243 RDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVY 302

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T G N +GQLG G  +    P  +  L  +  + Q+A G  + L ++ +G V+ FG  ++
Sbjct: 303 TFGRNDYGQLGLGHKMHMARPARVESLARM-RITQVACGCYHTLVLSDDGKVFPFGRNNH 361

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             LG     D L P+ I T R K   V +V+AG  H V L
Sbjct: 362 GQLGLETSVDCLSPQLISTLRNK--TVTKVAAGFYHSVCL 399



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSAS 58
           + +  G+++T+  + +  V + G +  G LG    +      TR+  P    VV Q+S  
Sbjct: 229 LAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCG 288

Query: 59  ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            +H A V + G V+T G N       GH+     + RP  VE+L  +   QV  G   T 
Sbjct: 289 YHHTAVVTEDGAVYTFGRNDYGQLGLGHK---MHMARPARVESLARMRITQVACGCYHTL 345

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            L+  G V   G N HGQLG   ++D  +P+ I+ L    +V ++AAG  + + + G
Sbjct: 346 VLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRN-KTVTKVAAGFYHSVCLVG 401


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 138/303 (45%), Gaps = 16/303 (5%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGF 117
           H+  V   G V+  GDNSS   G   TN+    P  V    G P     +V AG   +  
Sbjct: 66  HSLVVKNDGTVWAWGDNSSGQLG-IGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLA 124

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-----APLEEVGSVVQIAAGPSYMLAVT 172
           LT +G V T G N+ GQLG G   +R +P  +      PLE   ++V  A G  + LAV 
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE---NIVGAACGGKHSLAVA 181

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G V+++GS S+  +G G   +   PR +  F +    V  V+AG  H +AL   G V+
Sbjct: 182 SDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVW 241

Query: 233 TWGKGYCGALGHGDEIDKTLP-EPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWM 289
            WG    G LG   + D+  P + + S+   L   V + A +  +  L   G V+ +G  
Sbjct: 242 AWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNN 301

Query: 290 GFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
           G G LG  P  G     L  R  + +    V  I+    H++ + + G +  +G  +R Q
Sbjct: 302 GVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361

Query: 349 LGH 351
           LG 
Sbjct: 362 LGQ 364



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 39/367 (10%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENH 61
           G YH+L++ N  +V++ G +  G LG G      +S  R+   S A    V++V+A E H
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIG-TNKASLSPVRVMHKSGAPLNGVLKVAAGERH 121

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----FRPRLVEALKGVPCKQVTAGLNF 114
           +  +   G+V+T GDNS    G     +   P+     R   +E + G  C     G   
Sbjct: 122 SLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC-----GGKH 176

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTG 173
           +  +   G V   GSN+ GQ+G G   +R  P+ +    + +  V  +AAG ++ LA++ 
Sbjct: 177 SLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV 236

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           +G V+++G      LG    +D   P + + +  R   +VV ++AG    +AL   G V+
Sbjct: 237 DGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVW 296

Query: 233 TWGKGYCGALGHGDE---IDKTLPE------PLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            WG    G LG G     +   LP       PL  +++     + A  R +  L++ GSV
Sbjct: 297 AWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRA-----ITANGRHSLALMNDGSV 351

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
             +G    G LG   +G  +    P  L SL  H V  ++ G YH++ V + G +  +GD
Sbjct: 352 LAWGAGDRGQLG---QGAQNHEDHP-TLASL--HSVICLAAGRYHSLAVAENGAVLAWGD 405

Query: 344 NERAQLG 350
           N++ QLG
Sbjct: 406 NQKGQLG 412



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 122/318 (38%), Gaps = 69/318 (21%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 57
           +++  G  H+L L +   V++ G +  G LG G   E    V    I      ++V  + 
Sbjct: 113 LKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC 172

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
              H+  V   G V+  G NS    G    ++   P    R  + L GV  K V AG   
Sbjct: 173 GGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAH 230

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYML 169
           +  L++ G V   G N  GQLG     DR  P  +      PL+   +VV IAAG ++ L
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLD---NVVAIAAGRAFSL 287

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQH----DELQPRAIQTFRRKGIH-------------- 211
           A+T +G V+++G+     LG G  +    D L  RA      KG+               
Sbjct: 288 ALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMN 347

Query: 212 ---------------------------------VVRVSAGDEHVVALDSSGYVYTWGKGY 238
                                            V+ ++AG  H +A+  +G V  WG   
Sbjct: 348 DGSVLAWGAGDRGQLGQGAQNHEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWGDNQ 407

Query: 239 CGALGHG--DEIDKTLPE 254
            G LG G  D+    LPE
Sbjct: 408 KGQLGIGKADKNFHALPE 425



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 20/182 (10%)

Query: 198 QPRAIQTFR-----RKGIHVVR--VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           QPR  +  R     R   H V    + G  H + + + G V+ WG    G LG G   +K
Sbjct: 36  QPRPSEEARTSARHRNAPHPVWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIG--TNK 93

Query: 251 TLPEPLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVS 302
               P+  +    A     ++V A +R +  L   G V+ +G    G LG   F +R   
Sbjct: 94  ASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSP 153

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
            KV   R + +    ++   + G  H++ V   G ++ +G N   Q+G  TL+    P +
Sbjct: 154 VKV---RHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQ 210

Query: 363 IF 364
           + 
Sbjct: 211 VM 212


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 698

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 816

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 876

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 877 SWGKGDNQRLGH---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 933

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 934 DQCQ-HFDTLR 943



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 817

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 818 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 876

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 933

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 934 -DQCQHFDTLRVTKPEP 949



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 699

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 700 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 759

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 760 SAAITAEGELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 816

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 853



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 166
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 927 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPA 968


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 287 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 227
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 463

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 464 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 523

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 524 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 580

Query: 348 QLGHDTLRGCLEPT 361
           +LGH  +     PT
Sbjct: 581 RLGHGDVEDRKSPT 594



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 19/281 (6%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 333 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 392

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +  +GQ+FT GD +    GH D  + I  PR V++L G+    V  G+  T  + 
Sbjct: 393 WHTALISSTGQLFTFGDGTFGVLGHGD-KKSISYPREVDSLTGLRTIAVACGVWHTAAVV 451

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 452 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 510

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 511 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 568

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 268
             VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 569 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +  G +HT LIS++  +F+ G    GVLGHG +  + +S+ R ++  +    + V+    
Sbjct: 388 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVW 445

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 446 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 504

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 505 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 561

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 562 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 617



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 21/296 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +  + +  G+  +  +T +G V T G  T G+LG G   D   P+ + 
Sbjct: 264 VLLPKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVE 323

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L    +V  +A G  +  AVT +G +Y++G G +    LG+G       P+ I     +
Sbjct: 324 ALAAT-TVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-E 381

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS------- 261
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD+   + P  + SL         
Sbjct: 382 GLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVA 441

Query: 262 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
               H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 442 CGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDY 498

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           +  +I+ G   T+ +T  G++F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 499 NFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 554



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 226 DSSGYVYTWGK---------GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           D+ G ++ WG+         G   A       D  LP+PL S     A  +    R + +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G+   V +PR++++L A  V  ++ G +HT  VT  G
Sbjct: 291 VTRQGEVFTWGEETGGRLGL---GMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDG 347

Query: 337 RLFGFGD 343
            L+ +GD
Sbjct: 348 ELYTWGD 354


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 544

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 662

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 722

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 723 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 779

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 780 DQCQ-HFDTLR 789



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 663

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 664 TDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 722

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 779

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 780 -DQCQHFDTLRVTKPEP 795



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 545

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 546 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 605

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 606 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 662

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 699



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 713

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 714 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 773 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 818


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVY 178
           G  +  G NT+GQLG   T  R TP  +     V +    VQ++AG  + LA+  +G VY
Sbjct: 579 GKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVY 638

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           ++GS  +  LG+  + +   P  ++     T   KG+  ++VSAGDEH +ALDS+GYVY 
Sbjct: 639 AWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYVYA 698

Query: 234 WGKGYCGALGHGDEIDKTLP-------EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           WG    G LG+    D ++P        P    K   AVQV A    +  +   G  Y +
Sbjct: 699 WGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAW 758

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRIL----DSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           G   +G LG   +  S   +R R      D+ +     Q+S G  H++ V   G  + +G
Sbjct: 759 GLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYTYAWG 818

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
            N   QLG+        P  +
Sbjct: 819 LNNYGQLGNSNTVDSTVPVRV 839



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 171/408 (41%), Gaps = 52/408 (12%)

Query: 2   QITTGRYHTLLIS-----NSSVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAH 51
           Q+   +Y+T + S     +   ++ G +  G LG    TT   S   I       P+   
Sbjct: 560 QVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDA--TTNSRSTPNIVRKPTGVPTDFT 617

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDN------------SSFCCGHRDTNRPIFRPRLVEA 99
            VQVSA + H+  +   G V+  G N            SS     RD   P       + 
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANP------TDP 671

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEV 155
            KG+   QV+AG   +  L   G+V+  G N +G+LG+  T D   P  +    +P +  
Sbjct: 672 NKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPS 731

Query: 156 G--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RK 208
                VQ++AG  + LAV  +G  Y++G  +   LG+  ++    P  ++ F       K
Sbjct: 732 KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANK 791

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKS 261
           G+  V+VSAG  H +A+ S GY Y WG    G LG+ + +D T+P        P  + K 
Sbjct: 792 GLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKG 851

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRP-RILDSLRAH 317
             A  + A    +  + + G  Y +GW  +  LG     +  V   V  P    D+ +  
Sbjct: 852 LKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGL 911

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
             ++ S G +H++ V   G  + +G+N   QLG  T      P  +  
Sbjct: 912 QATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLF 959



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 126/278 (45%), Gaps = 26/278 (9%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 52
           +Q++ G  H+L L SN  V++ G +  G LG+   T   V   R+  P++          
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPV-RVRDPASPTDPSKGLKA 736

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 106
           VQVSA  +H+  V   G  +  G N+    G+   N   F  R+       +A KG+   
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG--SVVQ 160
           QV+AG + +  +   G+ +  G N +GQLG+ +T+D   P  +    +P +         
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 215
           I AG  + LAV  NG  Y++G      LG G   +   P  ++         KG+   R 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           S GD H +A+ S+GY Y WG+   G LG G   D  +P
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVP 954



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 33/327 (10%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 52
           +Q++ G++H+L + S+  V++ GS+  G LG+  +T   V   R+  P+           
Sbjct: 619 VQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPV-RVRDPANPTDPNKGLKA 677

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 106
           +QVSA + H+  +  +G V+  G N +   G+  T       R+       +  KG+   
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGS---VVQ 160
           QV+AG + +  +   G+ +  G N +GQLG+        P   +  A   +       VQ
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 215
           ++AG S+ LAV  +G  Y++G  +   LG+    D   P  ++         KG+    +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAI 857

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKSHLAVQVC 268
           +AG EH +A+ ++GY Y WG      LG G   + ++P        P  + K   A +  
Sbjct: 858 NAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFS 917

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLG 295
                +  +   G  Y +G   +G LG
Sbjct: 918 VGDHHSLAVGSNGYAYAWGENSYGQLG 944



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH----VV 53
           +Q++ G +H+L + S+   ++ G +  G LG+  + +        +F  P+ A+     V
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCKQ 107
           QVSA  +H+  V   G  +  G N+    G+ +T       R+       +A KG+    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------KSIAPLEEVGSVVQI 161
           + AG   +  +   G+ +  G N + QLG G T +   P       S A   +     + 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           + G  + LAV  NG  Y++G  S   LG G   D   P ++
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-------V 52
           +Q++ G  H+L + S+   ++ G +  G LG+   T       R+  P++          
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNS-NTVDSTVPVRVRDPTSPKDASKGLKA 854

Query: 53  VQVSASENHAAFVLQSGQVFTCG------------DNSSFCCGHRDTNRPIFRPRLVEAL 100
             ++A   H+  V  +G  +  G             NSS     RD   P       +A 
Sbjct: 855 TAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP------ADAS 908

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVV 159
           KG+   + + G + +  +   G+ +  G N++GQLG G T D   P S+   L+ V +  
Sbjct: 909 KGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAA 968

Query: 160 QIAAGPSYMLAVTGN 174
           +    P   LA   N
Sbjct: 969 RFDTSPGTNLASVSN 983


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 112/227 (49%), Gaps = 8/227 (3%)

Query: 71  VFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           V+ CG N++    CG R++    +R R     KG     V  G +++  + + G V +CG
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGR-VDGVACGSSYS-VVVVAGQVASCG 91

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
            N HGQLGHG   +   P+ +  L  V  VV +AA  ++ LA+   G VYS+G G    L
Sbjct: 92  KNVHGQLGHGGRDEETAPRVVEGLRGV-RVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG       PR I    R    VV V AG  H +ALD+ G VY+WG G  GALGHGD  
Sbjct: 151 GHGAFEAVPHPRRIA---RLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            +  P  +   K+  A  V    R   V+   G++  +GW  +G  G
Sbjct: 208 RQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCG 254



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 114/241 (47%), Gaps = 8/241 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           V+ CG N  GQLG GD   R  P  +       G V  +A G SY + V   G V S G 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGK 92

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             +  LGHG + +E  PR ++  R  G+ VV V+A   H +ALD  G VY+WG+G  G L
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLR--GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GHG       P  ++ L + + V V A +  +  L   G+VY +G    G+LG  DR   
Sbjct: 151 GHGAFEAVPHPRRIARLPTSV-VAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDR--- 206

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
            + L PR ++  +    + +S G  H  VVT  G L  +G     Q G       L P E
Sbjct: 207 RRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAE 266

Query: 363 I 363
           +
Sbjct: 267 V 267



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 137/360 (38%), Gaps = 42/360 (11%)

Query: 3   ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           +  G  +++++    V SCG ++ G LGHG    +      +       VV V+A   H 
Sbjct: 72  VACGSSYSVVVVAGQVASCGKNVHGQLGHGGRDEETAPRV-VEGLRGVRVVAVAARGAHT 130

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             +   G+V++ G       GH      +  PR +  L       V AG   +  L   G
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGH-GAFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADG 188

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V++ G    G LGHGD   +  P+++    +      ++ G  +   VT +G + ++G 
Sbjct: 189 AVYSWGCGDDGALGHGDRRRQLAPRAVE-FFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV-----ALDSSGYVYTWGK- 236
            +    G     D L+P  +      G   V  + G  H +     A   + + + W   
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAY 307

Query: 237 GYCGA---------------LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           G CG                LG  +  D  + E LS+   H    VC  +     L   G
Sbjct: 308 GQCGGSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRH---SVCCVR-----LPGGG 359

Query: 282 SV-YGFGWMGFGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQ-----ISTGLYHTVVVTD 334
           +  Y +G    G LG  DR   D+   PR+   + R + V Q     ++ G  HTV V D
Sbjct: 360 TATYAWGRGDDGQLGSGDR--RDRRANPRVAATAARVNSVGQRPLRGLACGWAHTVFVVD 417


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 20/298 (6%)

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNF 114
           A++  QS  V+T G+ +    GH    +   R       P+L EAL+G     V  G + 
Sbjct: 63  ASYATQS-SVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
           +  +   G ++  GSN + +LG G++ +  T P+ +  L+ +  +V ++ G  +  AV  
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGI-KIVDVSCGDYFTAAVDE 180

Query: 174 NGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +G +YS+G G +       LGH    DE  PR + T   +G+ +  V  G+ H VAL   
Sbjct: 181 DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKD 240

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G 
Sbjct: 241 GEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGG 300

Query: 289 MGFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
                LG    G++  V      P ++++     V QI+ G  H   VT+ GRL+ +G
Sbjct: 301 NSQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWG 357



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 51/377 (13%)

Query: 14  SNSSVFSCGSSLCGVLGHG---------------PETTQCVSFTRINFPSAAHVVQVSAS 58
           + SSV++ G+   G LGHG               P+ T+ +            +  V   
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALE--------GKAITHVEFG 118

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            +H+A + + G+++  G N     G  +++     PR VEALKG+    V+ G  FT  +
Sbjct: 119 ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAV 178

Query: 119 TIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVT 172
              G +++ G         G LGH    D PTP+ +  L + G  +  +  G  + +A+T
Sbjct: 179 DEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALT 238

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G+G    LG+GE      P  I+ F +   +VV ++AG +   AL   G +Y
Sbjct: 239 KDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDKGELY 296

Query: 233 TWGKGYCGALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +WG      LG G  +       +++P  + +    L  Q+ A       + + G +Y +
Sbjct: 297 SWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMW 356

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G              +   + P  + ++  H ++Q++ G  +TV +TD G++F FG    
Sbjct: 357 G--------------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSS 402

Query: 347 AQLGHDTLRGCLEPTEI 363
             LGH   +  L+P +I
Sbjct: 403 NCLGHGDRKNQLQPVKI 419



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 21/229 (9%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G +HT+ L  +  +++ G+   G LG+G E+  C     I F S  +VV ++A  + 
Sbjct: 227 VECGEFHTVALTKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGRDF 285

Query: 62  AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +  +   G++++ G NS    G       D       P LVEA  G+  KQ+ AG +   
Sbjct: 286 SFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAA 345

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +T  G ++  G+    +           P  +  + E   + Q+A G  Y + +T +G 
Sbjct: 346 AVTEDGRLYMWGAKIWIE-----------PHEMTAVNE-HKMTQVACGRQYTVGLTDDGK 393

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           V++FG GS+ CLGHG++ ++LQP  IQ     G+++  VS GD H+ A+
Sbjct: 394 VFTFGKGSSNCLGHGDRKNQLQPVKIQAL--AGVNITSVSCGDYHMGAI 440



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 40/341 (11%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 63
           G  H+  I     ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTA 176

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 117
            V + G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 177 AVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236

Query: 118 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           LT  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T  G
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDKG 293

Query: 176 VVYSFGSGSNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 294 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLLVKQIAAGYDHAAAVTEDG 351

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            +Y WG              K   EP  ++++  H   QV   ++ T  L D G V+ FG
Sbjct: 352 RLYMWGA-------------KIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFG 398

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                 LG  DR      L+P  + +L   +++ +S G YH
Sbjct: 399 KGSSNCLGHGDR---KNQLQPVKIQALAGVNITSVSCGDYH 436


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 165/356 (46%), Gaps = 29/356 (8%)

Query: 18  VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAH---VVQVSASENHAAFVLQS 68
           VF C S   G L   P +     Q + F  + +  P+  H   V  V++ E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 129 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 59/312 (18%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 62  AAFVLQSGQVFTCGDNS------------------------------------------- 78
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 199 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 254 EPLSSLKSHLAV 265
             + S+++  +V
Sbjct: 342 RMIDSVENVASV 353



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G   T+ ++ S ++F+ G +  G LG+   T + V   R   P+   VV V   +
Sbjct: 199 IQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR-EVPNINSVVVVECGD 255

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +H+  +   G+VF+CG +S     CG    ++   R   +  + G    ++  G   T  
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEMLGSHVTRIACGRCHT-I 312

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
           +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 313 VVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 16/286 (5%)

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTC 127
           F+ G N+    G   T   +  P  + AL+G+    V  G       +  +T +G V+T 
Sbjct: 1   FSWGFNNDGALG-LGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GS   GQLGHGD+ +   P+ I  L+    +V++A G ++ + V+  G+V+++G G    
Sbjct: 60  GSGKSGQLGHGDSQNLVLPRLIVGLQS-NPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G  H+   P  +Q     G+ V +V+ G  H   +  SG+VYTWG G  G LGHGD+
Sbjct: 119 LGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDD 176

Query: 248 IDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV--SDK 304
             ++ P  +  L   +++   C       V     +V+ +GW  +G LG     +   +K
Sbjct: 177 ASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNK 236

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              PR +  L+     QI+ G  +T+ ++ RG ++ FG  +  QLG
Sbjct: 237 NRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 11/231 (4%)

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG----PSYMLAVTGNGVVYSFG 181
           + G N  G LG G T    +P  I  L+ +  VV +A G      +  AVT  G VY++G
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGL-LVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG +  LGHG+  + + PR I   +   I  V V+ G  H V +  +G V+ WG G+ G 
Sbjct: 61  SGKSGQLGHGDSQNLVLPRLIVGLQSNPI--VEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G   +   P  ++SL      +V      T V+ ++G VY +GW   G LG  D   
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDAS 178

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGH 351
                RP  +  L   +VS ++ GL HTVVV++  R +F +G +E  QLGH
Sbjct: 179 QS---RPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 15/245 (6%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           + E H+A V + GQV+T G   S   GH D+   +  PRL+  L+  P  +V  G   T 
Sbjct: 42  SEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRLIVGLQSNPIVEVACGSAHTV 100

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            ++  G V   G    GQLG G T +   P  +  L+ V  V ++A G ++   VT +G 
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGH 159

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWG 235
           VY++G G N  LGHG+  D  Q R +   +  GI+V  ++ G  H VV  +    V++WG
Sbjct: 160 VYTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 236 KGYCGALGHGDEI-----DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
               G LGHG            P P+  L+     Q+      T  L   G VY FGW  
Sbjct: 218 WDEYGQLGHGGWDIFGGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGK 272

Query: 291 FGSLG 295
            G LG
Sbjct: 273 DGQLG 277



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 9/178 (5%)

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG----DEHVVALDSSGYVYT 233
           +S+G  ++  LG G       P  I     +G+ VV V+ G    ++H  A+   G VYT
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPI--IALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G  G LGHGD  +  LP  +  L+S+  V+V      T V+   G V+ +GW  FG 
Sbjct: 59  WGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           LG      S+  ++   LD ++   V +++ G  HT VVT+ G ++ +G     QLGH
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVK---VCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 16/243 (6%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++   +     V++ GS   G LGHG      +    +   S   +V+V+    H   V 
Sbjct: 45  QHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNP-IVEVACGSAHTVVVS 103

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           ++G VF  G       G   T+     P  V +L GV   +V  G   T  +T  GHV+T
Sbjct: 104 KAGLVFAWGWGHFGQLGVGSTHNS-NDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYT 162

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSN 185
            G   +GQLGHGD   +  P  +  L  +  V  +A G ++ + V+  +  V+S+G    
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGI-YVSTLACGLAHTVVVSEVDRAVFSWGWDEY 221

Query: 186 FCLGHGEQ-----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
             LGHG       +    PR I+  +       +++ G  + +AL S G VY +G G  G
Sbjct: 222 GQLGHGGWDIFGGNKNRSPRPIKDLQ-------QIACGSSYTLALSSRGDVYAFGWGKDG 274

Query: 241 ALG 243
            LG
Sbjct: 275 QLG 277



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC----ARKRKTFVLVDTGSVYGFG 287
           ++WG    GALG G       P P+ +L+  L V V     + ++ +  + + G VY +G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
               G LG  D   S  ++ PR++  L+++ + +++ G  HTVVV+  G +F +G     
Sbjct: 61  SGKSGQLGHGD---SQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG  +     +P ++
Sbjct: 118 QLGVGSTHNSNDPVQV 133


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 60
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 296

Query: 61  -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 120 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 415

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 225
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 416 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 473

Query: 226 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 474 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 533

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 345 ERAQLGHDTLRGCLEPTEI-FIQEME 369
              QLGH  +    EP  + F++E +
Sbjct: 591 LNGQLGHGNVENKREPAVVGFLREKQ 616



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS----------FTRI--NFPSA 49
           +  G +HT ++++S  +F+ G    G LGHG   +  V            T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 458

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A VV+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLL-PECVISLTNENICQVA 517

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 164
            G + T   T RGHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKGNFPERVEGDIVEASVEEIACG 571

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    +Y++G G N  LGHG   ++ +P  +   R K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI 620


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 133 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 189

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 246

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 247 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 303

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 304 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 359

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 303
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 360 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 418 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 456



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 126 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 182

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 183 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 238

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 239 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 296

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 297 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 351

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLG+ +      P  +
Sbjct: 352 SGQLGNGSFSSSARPAPV 369



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 69  GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 142 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 193

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 194 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 250

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 251 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 306

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 307 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 361

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 362 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 417

Query: 364 FIQEMEEDTGLA 375
            +  ++ +  +A
Sbjct: 418 RVPGLQGEVAVA 429



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L ++ +V++ G +  G LG+G   T   S T +  P  + VV V+A  
Sbjct: 226 VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQVVSVAAGG 282

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +   G V+  G+N     G    T R   +P  VE L+ V    V     F   L
Sbjct: 283 FHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREV----VAVAGGFYHSL 336

Query: 119 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +R  G + + G+N  GQLG+G       P   AP++ +G+V  +AAG  + +AV  +G 
Sbjct: 337 AVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVTSVAAGGMHSVAVQADGT 393

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 235
           V+++G      LGH     E  P      R  G+   V V+AG  H +++ + G ++ WG
Sbjct: 394 VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 448

Query: 236 KGYCGALGHGDEIDKTLPEP 255
               G LG  +     +P P
Sbjct: 449 LNDFGQLGDSEAPLMPVPAP 468


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 211
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 78  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 134

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 270
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 194

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 195 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 254

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRG 356
           V+T+ G++F FG +   QL H    G
Sbjct: 255 VLTEDGQVFTFGGSSSEQLQHSPRSG 280



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 58
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 31  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 88

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207

Query: 178 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 265

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 21  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 79

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 80  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196

Query: 221 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 336
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 257 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 312

Query: 337 RLFGFG 342
           ++   G
Sbjct: 313 QVVSLG 318



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 60  NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 159
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 315

Query: 160 QIAAGPS 166
            +  GPS
Sbjct: 316 SLGRGPS 322


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 60
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 250 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 309

Query: 61  -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 310 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 368

Query: 120 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 369 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 428

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 225
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 429 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 486

Query: 226 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 487 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 546

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 547 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 603

Query: 345 ERAQLGHDTLRGCLEPTEI-FIQEME 369
              QLGH  +    EP  + F++E +
Sbjct: 604 LNGQLGHGNVENKREPAVVGFLREKQ 629



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS----------FTRI--NFPSA 49
           +  G +HT ++++S  +F+ G    G LGHG   +  V            T++       
Sbjct: 412 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 471

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A VV+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 472 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLL-PECVISLTNENICQVA 530

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 164
            G + T   T RGHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKGNFPERVEGDIVEASVEEIACG 584

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             ++  +T    +Y++G G N  LGHG   ++ +P  +   R K +  +
Sbjct: 585 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI 633


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 130 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 186

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 243

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 244 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 300

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 301 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 356

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 303
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 357 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 415 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 453



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 123 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 179

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 180 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 235

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 236 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 293

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 294 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 348

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLG+ +      P  +
Sbjct: 349 SGQLGNGSFSSSARPAPV 366



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 69  GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 139 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 190

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 191 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 247

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 248 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 303

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 304 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 358

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 359 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 414

Query: 364 FIQEMEEDTGLA 375
            +  ++ +  +A
Sbjct: 415 RVPGLQGEVAVA 426



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L ++ +V++ G +  G LG+G   T   S T +  P  + VV V+A  
Sbjct: 223 VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQVVSVAAGG 279

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +   G V+  G+N     G    T R   +P  VE L+ V    V     F   L
Sbjct: 280 FHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREV----VAVAGGFYHSL 333

Query: 119 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +R  G + + G+N  GQLG+G       P   AP++ +G+V  +AAG  + +AV  +G 
Sbjct: 334 AVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVTSVAAGGMHSVAVQADGT 390

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 235
           V+++G      LGH     E  P      R  G+   V V+AG  H +++ + G ++ WG
Sbjct: 391 VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 445

Query: 236 KGYCGALGHGDEIDKTLPEP 255
               G LG  +     +P P
Sbjct: 446 LNDFGQLGDSEAPLMPVPAP 465


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 227
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 424

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 425 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 484

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 485 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 541

Query: 348 QLGHDTLRGCLEPT 361
           +LGH  +     PT
Sbjct: 542 RLGHGDVEDRKSPT 555



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 294 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 353

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +  +GQ+FT GD +    GH D    I  PR V++L G+    V  G+  T  + 
Sbjct: 354 WHTALISSTGQLFTFGDGTFGVLGHGD-KXSISYPREVDSLTGLRTIAVACGVWHTAAVV 412

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 413 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 471

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 472 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 529

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 268
             VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 530 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 60
           +  G +HT LIS++  +F+ G    GVLGHG + +  +S+ R ++  +    + V+    
Sbjct: 349 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVW 406

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 407 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 465

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 466 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 522

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 523 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 578



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           +  +  +T +G V T G  T G+LG G   D   P+ +  L    +V  +A G  +  AV
Sbjct: 246 IRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAAT-TVDLVACGEFHTCAV 304

Query: 172 TGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           T +G +Y++G G +    LG+G       P+ I     +G+ V  V+ G  H   + S+G
Sbjct: 305 TMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-EGLQVAYVACGPWHTALISSTG 363

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-----------HLAVQVCARKRKTFVLV 278
            ++T+G G  G LGHGD+   + P  + SL             H A  V     ++   +
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSI 423

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G ++ +G      LG  D+   +  L+P  + +L  ++  +I+ G   T+ +T  G++
Sbjct: 424 PSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQV 480

Query: 339 FGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 481 FTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 515


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 165/356 (46%), Gaps = 29/356 (8%)

Query: 18  VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAH---VVQVSASENHAAFVLQS 68
           VF C S   G L   P +     Q + F  + +  P+  H   V  V++ E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 129 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 59/308 (19%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 62  AAFVLQSGQVFTCGDNSS------------------------------------------ 79
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 80  -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 199 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 254 EPLSSLKS 261
             + S+++
Sbjct: 342 RMIDSVEN 349



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G   T+ ++ S ++F+ G +  G LG+   T + V   R   P+   VV V   +
Sbjct: 199 IQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR-EVPNINSVVVVECGD 255

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +H+  +   G+VF+CG +S     CG    ++   R   +  + G    ++  G   T  
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEMLGSHVTRIACGRCHT-I 312

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
           +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 313 VVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 211

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 121
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 212 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 268

Query: 122 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 269 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 325

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 232
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 326 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 383

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 384 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 441

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 442 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 495

Query: 353 TLRGCLEPTEIFIQEMEEDTGLA 375
              G     EI +Q     TGLA
Sbjct: 496 ---GITATREIPVQA----TGLA 511



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 23/363 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++  + H
Sbjct: 416 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALATGDGH 472

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G ++  GDN     G   T     R   V+A        + AG + +  L   
Sbjct: 473 SVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLALRGN 529

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V+ +G
Sbjct: 530 GSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTVWVWG 586

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
           S     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG    G
Sbjct: 587 SNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG    G
Sbjct: 642 QLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGNGTSG 699

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T      P
Sbjct: 700 IQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTP 754

Query: 361 TEI 363
           T++
Sbjct: 755 TQV 757



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 59
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 307 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 363

Query: 60  -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 364 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 420

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 421 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 477

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 478 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 533

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 534 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 591

Query: 293 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 592 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 644

Query: 351 HDTLRGCLEPTEI 363
             T+     P ++
Sbjct: 645 DGTVTSRAMPVQV 657



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 466 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 522

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 523 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 579

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 580 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 636

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 637 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 692

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 693 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 747

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 748 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 805

Query: 362 EI 363
           ++
Sbjct: 806 QV 807



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 156/368 (42%), Gaps = 33/368 (8%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 516 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 572

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +  +   G V+  G N     G      R T   +     + A++  P   V   LN   
Sbjct: 573 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLN--- 629

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G 
Sbjct: 630 -----GTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGT 681

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG 
Sbjct: 682 LWAWGYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGA 737

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG 
Sbjct: 738 NSFGQLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG- 794

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLR 355
            D  V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T  
Sbjct: 795 -DGTVTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTAS 849

Query: 356 GCLEPTEI 363
               P  +
Sbjct: 850 IMPAPVNV 857



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 132/327 (40%), Gaps = 36/327 (11%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 202

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 163
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 203 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 262

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 263 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 315

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-------QVCARKRKTFV 276
           AL   G V+ WG    G LG G    +  P  +  L S +AV        +  R   +  
Sbjct: 316 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 375

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 376 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 430

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +GDN   QLG        +P ++
Sbjct: 431 TVWAWGDNSSGQLGEGVTPVRAKPMQV 457



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 145 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 201

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 217
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 202 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 259

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 260 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 317

Query: 278 VDTGSVYGFGWMGFGSLG 295
            D G+V+ +G    G LG
Sbjct: 318 RDDGTVWAWGNNSSGQLG 335


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 17/302 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           VF  G +  G LG G    + +  +++ F    +V Q++A   H A + ++G V T G N
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIP-SQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFN 99

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 135
            S   GH + N+ I  P+ +E+LK +    +++  G      ++  G ++TCG N +GQL
Sbjct: 100 GSGQLGHGN-NKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN--------GVVYSFGSGSNFC 187
           GHG   +  TP  +  L++   V  ++    + L VT +          VYS G   N  
Sbjct: 159 GHGTQSNLSTPTLVQALKDT-QVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ 217

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG      E+ P+ I++   +   V++ + G  H V +   G V++ G    G LGH D 
Sbjct: 218 LGQEHTCHEITPKIIRSLNTR--QVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
             +  P  + SLK+   VQ       T V  DTG +Y FG    G LG    G +  +++
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA--LIQ 333

Query: 308 PR 309
           P+
Sbjct: 334 PK 335



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 20/305 (6%)

Query: 71  VFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           VF  G NS    G  D   R I  P  V     +   Q+ AG      LT  G V T G 
Sbjct: 41  VFVFGQNSYGELGLGDVQERSI--PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           N  GQLGHG+     TPK I  L+ +  + +  A G   +  ++ +G +Y+ G  +   L
Sbjct: 99  NGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV--------ALDSSGYVYTWGKGYCG 240
           GHG Q +   P  +Q    K   V  VS    H +        A +    VY+ G+   G
Sbjct: 159 GHGTQSNLSTPTLVQAL--KDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNG 216

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            LG      +  P+ + SL +   +Q  C      FV V  G V+  G+   G LG  D 
Sbjct: 217 QLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVH-GEVFSCGFNDNGQLGHNDT 275

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL-RGCL 358
              ++   P +++SL+   + Q + G YHT+V  D G ++ FG N++ QLG +T  +  +
Sbjct: 276 KSRNQ---PVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALI 332

Query: 359 EPTEI 363
           +P +I
Sbjct: 333 QPKQI 337



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 37/370 (10%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ--- 67
           ++  +  +++CG +  G LGHG ++      T +       V  VS S  H+  V Q   
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMR 198

Query: 68  --SGQ---VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             S Q   V++ G N +   G   T   I  P+++ +L      Q   GL+ + F+T+ G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEI-TPKIIRSLNTRQVIQTACGLHHSVFVTVHG 257

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V +CG N +GQLGH DT  R  P  I  L+    +VQ A G  + L     G +Y+FG 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKN-KFIVQAACGYYHTLVRRDTGEIYAFGR 316

Query: 183 GSNFCLGHGEQHDEL-QPRAIQTF------RRKGIHVVRVSAGDEH----VVALDSSGYV 231
                LG       L QP+ IQ F      +  G +  ++ +G EH      +L  SG +
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAI 376

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
                     L   + ++   P+     K     ++      +  L ++G ++ FG    
Sbjct: 377 MQ-------GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNH 429

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG   +G ++    P+ + SL    V  I+ G YHT+V+  + ++ G      +QL  
Sbjct: 430 GQLG---QGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGI-----SQLST 481

Query: 352 DTLRGCLEPT 361
           D  +   EP+
Sbjct: 482 DMKKIINEPS 491


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 139/316 (43%), Gaps = 18/316 (5%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A V + G+VFT G+ S    GH   ++   +P LVE    V    V  G   T  ++ 
Sbjct: 102 HLAIVSREGKVFTWGEESGGRLGH-GIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSK 160

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
             +  T G  TH  G LGHG+ +    PKS+    +   VV +A G  +    T NG ++
Sbjct: 161 CDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLF 220

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSS 228
           +FG G+   LGHG+Q   + P+ +Q     G+  V+V+ G  H  A+           SS
Sbjct: 221 TFGDGTFGVLGHGDQESVMYPKEVQLL--SGLKTVKVACGVWHTAAIIEVAFQSGSNASS 278

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
             ++TWG G    LGHG++     P  +S L  +   Q+      T  L  +G V+  G 
Sbjct: 279 WKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGS 338

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              G LG P+       L   + D L    + +IS G +H   VT R  L+ +G     +
Sbjct: 339 TENGQLGNPNAAGKVPTL---VQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGR 395

Query: 349 LGHDTLRGCLEPTEIF 364
           LGH        PT + 
Sbjct: 396 LGHGDTDDRKSPTLVL 411



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 3   ITTGRYHTLLISNSSVFSC---GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  +S    F     G+   G+LGHG E +  +  +   F     VV V+   
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
            H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G+  T  + 
Sbjct: 208 WHSALATSNGKLFTFGDGTFGVLGHGD-QESVMYPKEVQLLSGLKTVKVACGVWHTAAII 266

Query: 119 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
                         + T G     +LGHG+      P  ++PL E  +  QIA G +  +
Sbjct: 267 EVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEY-NFQQIACGHTMTV 325

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A+T +G V++ GS  N  LG+     ++ P  +Q  +  G  +  +S G  HV A+ S  
Sbjct: 326 ALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQD-KLLGEFIEEISCGAHHVAAVTSRS 383

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 268
            +YTWGKG  G LGHGD  D+  P  + +LK  HL    C
Sbjct: 384 ELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISC 423



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PRL+E+   +  + + +G +    ++  G V T G  + G+LGHG   D   P  + 
Sbjct: 79  VLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH-LV 137

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
              +V ++  +A G  +  AV+     +++G G++    LGHG +     P+++  F   
Sbjct: 138 EFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGF-LD 196

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ VV V+ G  H     S+G ++T+G G  G LGHGD+     P+ +  L     V+V 
Sbjct: 197 GLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVA 256

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                T  +++     G        F W G G       G  D  L+P  +  L  ++  
Sbjct: 257 CGVWHTAAIIEVAFQSGSNASSWKLFTW-GDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ 315

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 368
           QI+ G   TV +T  G +F  G  E  QLG+    G + PT +       FI+E+
Sbjct: 316 QIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQDKLLGEFIEEI 369



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +   G VY +G    F  G   + D L PR +++     + V  + +G  H+  +   G 
Sbjct: 56  IESKGDVYIWGEV--FADGFPSKTDVLTPRLLES--TVVLDVRDIVSGTHHLAIVSREGK 111

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEP-LSSLKS--HLAVQVCARKRKTFV-LVDTGSVYGF 286
           V+TWG+   G LGHG  IDK   +P L        L +  C     + V   D    +G 
Sbjct: 112 VFTWGEESGGRLGHG--IDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGD 169

Query: 287 GWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G    G LG  +  +S  + +     LD LR   V  ++ G +H+ + T  G+LF FGD 
Sbjct: 170 GTHNVGLLGHGNE-ISHWIPKSVNGFLDGLR---VVSVACGSWHSALATSNGKLFTFGDG 225

Query: 345 ERAQLGHDTLRGCLEPTEI 363
               LGH      + P E+
Sbjct: 226 TFGVLGHGDQESVMYPKEV 244



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 94/253 (37%), Gaps = 70/253 (27%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   S    V+V+  
Sbjct: 201 VSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQ--ESVMYPKEVQLLSGLKTVKVACG 258

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD   F  GH + +    +P  V  L     +Q+
Sbjct: 259 VWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDM-YLKPTRVSPLIEYNFQQI 317

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLG-------------------------------- 136
             G   T  LT  GHV T GS  +GQLG                                
Sbjct: 318 ACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVA 377

Query: 137 --------------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                               HGDT DR +P  +  L++   +  I+ G ++   V     
Sbjct: 378 AVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKD-RHLKNISCGSNFTSCVCNQK- 435

Query: 177 VYSFGSGSNFCLG 189
            Y  G+  + C G
Sbjct: 436 -YVSGTDQSVCFG 447


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 182
           V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y +A + +G  VYS+G 
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGKDVYSWGW 183

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G    LGHG+  D   P  I+    +G+ + ++S GD H +A+     V +WG+   G L
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G G   D  +P+ + + +      V A    +  + + G +YG+GW  +G+LG  D   +
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD--TN 299

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++  QLGH     CL P +
Sbjct: 300 DRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRK 357

Query: 363 I 363
           +
Sbjct: 358 V 358



 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 7/256 (2%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-V 71
           +S + V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V
Sbjct: 120 VSGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDV 178

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           ++ G       GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N 
Sbjct: 179 YSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G
Sbjct: 238 NGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           + +D L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  
Sbjct: 297 DTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL 353

Query: 252 LPEPLSSLKSHLAVQV 267
           +P  + +L   L  QV
Sbjct: 354 VPRKVQALSDKLISQV 369



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 91  IFRPRLVEALKGVPCKQVTA-GLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           I  P L E+ +   C +V A  +NF  F+  R G+V     +     G G     P+ ++
Sbjct: 20  ISTPLLPESWR--LCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSD---PSWRT 74

Query: 149 IAPLEEVGSV--------------VQIAAGPSYMLA---------VTGNGVVYSFGSGSN 185
           + PLE +G V              V++ +G   + +         V+GN VV S+G G +
Sbjct: 75  LEPLESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGN-VVCSWGRGED 133

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGH 244
             LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+WG G  G LGH
Sbjct: 134 GQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH 191

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           GD  D  +P P+ +L+     Q+         +     V  +G    G LG    G +  
Sbjct: 192 GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGL---GTTKD 248

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
              P+ + +     +  ++ G  H+V +T+ G L+G+G      LG       L P ++ 
Sbjct: 249 SHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN 308

Query: 365 IQ 366
           I 
Sbjct: 309 ID 310



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYG 285
           S   V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY 
Sbjct: 121 SGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYS 180

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +GW  FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+
Sbjct: 181 WGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 346 RAQLGHDTLRGCLEPTEIFIQE 367
             +LG  T +    P +I   E
Sbjct: 238 NGELGLGTTKDSHVPQKILAFE 259


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 47   PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            P  +   QV   +N +  +  +G V   G+      G  +++  +F P ++ A +G    
Sbjct: 3708 PCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDD-LFVPTIISAFQGYVVT 3766

Query: 107  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3825

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            G  +   VT +G +++FGSG +  LG     +++QP  +     +G HV +VS G  H +
Sbjct: 3826 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAAL--EGYHVGQVSCGLNHTL 3883

Query: 224  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + VL   G 
Sbjct: 3884 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGH 3943

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3944 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWG 4000

Query: 343  DNERAQLGHDTLRGCLEPTEI 363
             N   QLG        EPT I
Sbjct: 4001 CNSEGQLGLGHCNLVKEPTLI 4021



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 150/342 (43%), Gaps = 18/342 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 59
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 118
            H   +   G+VF+ GD      GH ++    + P++V+  L        +AG   +  +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIVQGPLFSKIVVSASAGYRHSAAV 492

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 177
           T  G ++T G    G+LGH D+  R TP  +  +  VG   Q+A G S+ +AV  +G  +
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG---QVACGSSHTIAVAQDGRTM 549

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 607

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 608 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 664

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 335
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 665 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 706



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 340 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 396

Query: 131 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG    +  P+ +Q      I VV  SAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQ 515

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            +  P  +  + S +    C       V  D  +++ FG    G LG    G +++V RP
Sbjct: 516 SRNTPTLVKDI-SGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLG---HGDTNRVYRP 571

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 572 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 605



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 11/336 (3%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 58
            Q+  G+  + LI SN +V + G    G LG G      V      F       +V    S
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3833

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 177
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3834 TADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3892

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++FG G    LG G    +  P+ ++    KG+   +V  G +  V L + G+VYT+G+ 
Sbjct: 3893 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK--KVCCGAQFSVVLATDGHVYTFGQE 3950

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
                L      +++ P+ + SL+      +         L  TG +Y +G    G LG  
Sbjct: 3951 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL- 4009

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
              G  + V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4010 --GHCNLVKEPTLITALQGKNIKQISAGRCHSSAWT 4043



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 11/233 (4%)

Query: 121  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NG V +
Sbjct: 3680 KSDVYLWGNGRYGQLAGTGTNLTLPT---LAPC--LSQTQQVVCGQNCSFLIQSNGAVMA 3734

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 238
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3735 VGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3794

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3795 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3852

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
            R  S+K ++P  + +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3853 RSTSNK-MQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3904



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 132/330 (40%), Gaps = 51/330 (15%)

Query: 2   QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q+  G  HT+ ++    +++S G    G LGHG +T +      I       + +V A  
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGS 589

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ G +    L+
Sbjct: 590 QSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISCGDSHCLALS 647

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ LA T      
Sbjct: 648 HENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSLAWT------ 700

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY--TWGK 236
                                 A+ T R+       V+      V L+ S + Y   + K
Sbjct: 701 ----------------------AVPTDRQ------LVAWHRPFCVDLEESTFTYLCNFLK 732

Query: 237 GYCGALGHGDEIDKTLPEP-LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            YC  L      D T P P LS    H  + +C +     V +      G G M  GS G
Sbjct: 733 CYCDGLE-----DDTPPTPFLSKRDHHQFILLCMKLLS--VHLSLAHAGGTGAMVLGSQG 785

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            P R +  +++   +  S++   ++ +S G
Sbjct: 786 RPLRNLLFRLIDSNMPGSIQQAVLNTLSIG 815



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G     L P+  Q F         + AG     ++ + G V   GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT----IEAGQYCTFSVSTDGSVKACGK 395

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  ++++P+ L  L+ H  ++     +     T  +   G V+ +G   +G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLV-LEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYG 454

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+I+   L +  V   S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 455 KLG---HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511

Query: 352 DTLRGCLEPTEI 363
              +    PT +
Sbjct: 512 SDSQSRNTPTLV 523



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L  G   + TLP     L      QV   +  +F++   G+V   G   
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMAVGEGQ 3739

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3740 YGRLG---QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3796

Query: 348  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            +LGH        P +I   + E+   LA
Sbjct: 3797 KLGHGNNERQRRPKQIEALQGEDVVQLA 3824


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 463

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 581

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 641

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 642 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 698

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 699 DQCQ-HFDTLR 708



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 519

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 520 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 578

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 579 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 637

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 638 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 695

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 696 GSN--DQCQHFDTLRVTKPEP 714



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 464

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 465 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 524

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 525 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 581

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 613



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 692 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 737


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 18/311 (5%)

Query: 53   VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
            + ++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G 
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACGE 1263

Query: 113  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1264 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1323

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1324 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVMN 1381

Query: 226  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1382 QTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTS 1441

Query: 281  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1442 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1498

Query: 341  FGDNERAQLGH 351
            +G     +LGH
Sbjct: 1499 WGKGSNGRLGH 1509



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1317

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 111
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1318 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376

Query: 112  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 1435

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1493

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 1494 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 1525



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 150/362 (41%), Gaps = 37/362 (10%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
            + I  G  H  L++    VF+      G LGHG       P+  + ++ T I+F      
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF------ 1258

Query: 53   VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
              V+  E H   V  SG +FT GD  ++    GH          R+   ++G+    V  
Sbjct: 1259 --VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVAC 1316

Query: 111  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            G   +   T  G + T G    G LGHGD      PK +  L  + + +++A G  + +A
Sbjct: 1317 GTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT-LKVACGVWHTVA 1375

Query: 171  V----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
            +          T +  ++++G G    LGHG +   L P  + +      +  +++ G  
Sbjct: 1376 IVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--QIACGHT 1433

Query: 221  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVD 279
              VAL +SG+V+T G    G LG  +  D  LP  +   L      ++        VL  
Sbjct: 1434 FTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEISCGDHHVAVLTS 1492

Query: 280  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
               V+ +G    G LG  D+   D    P ++++LR  HV  IS G   +V    R + F
Sbjct: 1493 RSEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCGADQSVCSGCR-QAF 1548

Query: 340  GF 341
            GF
Sbjct: 1549 GF 1550



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            + IA G  ++  VT  G V+++   +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACG 1262

Query: 219  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTF 275
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S     L V  V      + 
Sbjct: 1263 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 1322

Query: 276  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 332
            +    G ++ FG   FG LG  DR   + V  P+ +  L      +++ G++HTV +   
Sbjct: 1323 LATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEV 1379

Query: 333  -------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                   T   +LF +GD ++ +LGH      L PT
Sbjct: 1380 MNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 1415


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 40/365 (10%)

Query: 6   GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HTL L +N +V++ G    G LG+G  T    S   +       V  ++A  +H   
Sbjct: 47  GESHTLALNANGTVWAWGG---GQLGNGSTTG---SPAPVQVQDLHSVEAIAAGGSHNLA 100

Query: 65  VLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +   G V+  G N     G   T   N P+     VE L+ +    V A  ++   L ++
Sbjct: 101 IKSDGTVWAWGFNGYGQLGDGSTTGRNTPV----QVEGLRSI----VGAAAHYDHSLALK 152

Query: 122 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N +GQLG G   DR TP  +  L+   SVV I++G  Y LAV  +G V++
Sbjct: 153 SDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLD---SVVAISSGFGYSLAVKSDGTVWA 209

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG+G       P  +Q     G+H V  V++GD H +A+   G V++WG   
Sbjct: 210 WGKNEYGQLGNGSTTQSSAPVQVQ-----GLHSVTAVASGDYHNLAIKRDGTVWSWGPNL 264

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G ++D+  P  +    S  AV V A    +  L   G+V+ +G   F   GF  
Sbjct: 265 AGQLGDGSDMDRYTPVQVEGFSS--AVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFG- 321

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              S   ++ + LDS     V  I+ G  H++ V + G ++ +G N+  QLG  T    L
Sbjct: 322 ---SSTPVQVQELDS-----VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARL 373

Query: 359 EPTEI 363
            P ++
Sbjct: 374 TPIKV 378



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           A G S+ LA+  NG V+++G G    LG+G       P  +Q        V  ++AG  H
Sbjct: 45  AGGESHTLALNANGTVWAWGGGQ---LGNGSTTGSPAPVQVQDLHS----VEAIAAGGSH 97

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ S G V+ WG    G LG G    +  P  +  L+S   V   A    +  L   G
Sbjct: 98  NLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEGLRS--IVGAAAHYDHSLALKSDG 155

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +V+ +G   +G LG   +      +R + LDS+ A     IS+G  +++ V   G ++ +
Sbjct: 156 TVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVA-----ISSGFGYSLAVKSDGTVWAW 210

Query: 342 GDNERAQLGHDTLRGCLEPTEI 363
           G NE  QLG+ +      P ++
Sbjct: 211 GKNEYGQLGNGSTTQSSAPVQV 232



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 16/205 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I++G  ++L + S+ +V++ G +  G LG+G  TTQ  S   +       V  V++ + H
Sbjct: 191 ISSGFGYSLAVKSDGTVWAWGKNEYGQLGNG-STTQ--SSAPVQVQGLHSVTAVASGDYH 247

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
              + + G V++ G N +   G   D +R  + P  VE         V AG   +  L  
Sbjct: 248 NLAIKRDGTVWSWGPNLAGQLGDGSDMDR--YTPVQVEGFSSA--VDVDAGFGHSLALKS 303

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G+    + G G +    TP  +   +E+ SVV IAAG  + LAV  +G V+++
Sbjct: 304 DGTVWAWGNYQFNEWGFGSS----TPVQV---QELDSVVDIAAGTQHSLAVRNDGTVWAW 356

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTF 205
           G   N  LG G     L P  +Q F
Sbjct: 357 GKNDNGQLGDGTSTARLTPIKVQGF 381


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 148/322 (45%), Gaps = 20/322 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    SD      + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPK---SDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 339 FGFGDNERAQLGHDTLRGCLEP 360
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 112
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 113 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               N TG   +   ++T G     +LGHGD   R  PK +  L E     Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-DFHQLACGHNMT 489

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 147/354 (41%), Gaps = 40/354 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 108
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 169 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFH--QLACG 485

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 14/292 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 269 ARKRKTFVLVDTGSVYGFGWM-------GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
                +  +V+  +  G   M       G G       G  +  L P+ + +L  +   Q
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQ 481

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           ++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 339 FGFGDNERAQLGHDTLRGCLEP 360
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 112
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 113 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 148/354 (41%), Gaps = 40/354 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 108
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   +   T  G ++T G  T G LGHGD      PK +  L    ++ ++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTI-KVACGIWHS 427

Query: 169 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 14/292 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 269 ARKRKTFVLVDTGSVYGFGWM-------GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
                +  +V+  +  G   M       G G       G  +  L P+ + +L  ++  Q
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQ 481

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           ++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 210

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 121
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 211 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 267

Query: 122 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 268 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 324

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 232
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 325 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 382

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 383 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 440

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 441 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 494

Query: 353 TLRGCLEPTEIFIQEMEEDTGLA 375
              G     EI +Q     TGLA
Sbjct: 495 ---GITATREIPVQA----TGLA 510



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 23/363 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++  + H
Sbjct: 415 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALATGDGH 471

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G ++  GDN     G   T     R   V+A        + AG + +  L   
Sbjct: 472 SVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLALRGN 528

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V+ +G
Sbjct: 529 GSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTVWVWG 585

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
           S     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG    G
Sbjct: 586 SNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG    G
Sbjct: 641 QLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGNGTSG 698

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T      P
Sbjct: 699 IQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTP 753

Query: 361 TEI 363
           T++
Sbjct: 754 TQV 756



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 59
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 306 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 362

Query: 60  -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 363 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 419

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 420 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 476

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 477 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 532

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 533 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 590

Query: 293 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 591 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 643

Query: 351 HDTLRGCLEPTEI 363
             T+     P ++
Sbjct: 644 DGTVTSRAMPVQV 656



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 465 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 521

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 522 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 578

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 579 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 635

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 636 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 691

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 692 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 746

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 747 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 804

Query: 362 EI 363
           ++
Sbjct: 805 QV 806



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 156/368 (42%), Gaps = 33/368 (8%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 515 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 571

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +  +   G V+  G N     G      R T   +     + A++  P   V   LN   
Sbjct: 572 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLN--- 628

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G 
Sbjct: 629 -----GTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGT 680

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG 
Sbjct: 681 LWAWGYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGA 736

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG 
Sbjct: 737 NSFGQLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG- 793

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLR 355
            D  V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T  
Sbjct: 794 -DGTVTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTAS 848

Query: 356 GCLEPTEI 363
               P  +
Sbjct: 849 IMPAPVNV 856



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 132/327 (40%), Gaps = 36/327 (11%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 201

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 163
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 202 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 261

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 262 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 314

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-------QVCARKRKTFV 276
           AL   G V+ WG    G LG G    +  P  +  L S +AV        +  R   +  
Sbjct: 315 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 374

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 375 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 429

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +GDN   QLG        +P ++
Sbjct: 430 TVWAWGDNSSGQLGEGVTPVRAKPMQV 456



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 144 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 200

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 217
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 201 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 258

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 259 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 316

Query: 278 VDTGSVYGFGWMGFGSLG 295
            D G+V+ +G    G LG
Sbjct: 317 RDDGTVWAWGNNSSGQLG 334


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 611

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 612 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 670

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 727

Query: 239 CGALGHGDEIDKTLPEP 255
                H D +  T PEP
Sbjct: 728 -DQCQHFDTLRVTKPEP 743



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 647



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 20/314 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G   T  +T 
Sbjct: 88  HSALVTKNGEVFTWGEESGGRLGHGSREDSIH-PRLIESLAVCNVDIVACGEFHTCAVTT 146

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +T  G ++
Sbjct: 147 AGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLF 206

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------DS 227
           +FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+            S
Sbjct: 207 TFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           SG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +G V   G
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMG 324

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F +G     
Sbjct: 325 NTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANG 380

Query: 348 QLGHDTLRGCLEPT 361
           +LGH  +     PT
Sbjct: 381 RLGHGDIEDRKIPT 394



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 139 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 250
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 251 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 358
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 359 EPT 361
           +PT
Sbjct: 289 KPT 291



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 23/340 (6%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           ++  L+  N  VF+ G    G LGHG      +    I   +  +V  V+  E H   V 
Sbjct: 87  KHSALVTKNGEVFTWGEESGGRLGHGSR-EDSIHPRLIESLAVCNVDIVACGEFHTCAVT 145

Query: 67  QSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            +G+++T GD +      GH +D +  I + R+  AL+G+    V+ G   T  +T  G 
Sbjct: 146 TAGELYTWGDGTHNVGLLGHGKDVSHWIPK-RIAGALEGLAVAYVSCGTWHTALITTMGQ 204

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 172
           + T G  T G LGHG+      PK +  L  + + + +A G  +  A+            
Sbjct: 205 LFTFGDGTFGVLGHGNRESISCPKEVESLSGLKT-ISVACGVWHTAAIVEVIVTQSSSSI 263

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++++G G    LGHG++   L+P  + +      H  R++ G    V L +SG V 
Sbjct: 264 SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFH--RIACGHSLTVGLTTSGKVL 321

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           + G    G LG+    D  +P  +  +     VQV        VL     V+ +G    G
Sbjct: 322 SMGNTVYGQLGN-PRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANG 380

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 381 RLGHGD--IEDRKI-PTLVEALRDRSVRHIACGANFTAAI 417



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 120 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +T +G V S G+     LG+     ++ P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGNPRSDGKI-PCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 18/274 (6%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGA-LE 182

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P+ + SL     + V 
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 269 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
                T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDY 299

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              +I+ G   TV +T  G++   G+    QLG+
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGN 333



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 61  HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 167
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG-DGTHNVGLLG 164

Query: 299 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 165 HGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESI 224

Query: 358 LEPTEI 363
             P E+
Sbjct: 225 SCPKEV 230



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 226 DSSGYVYTWGKGYC-GALGHGDE--------IDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           DSSG VY WG+  C  ++  G +         D   P+PL S     A  V    + + +
Sbjct: 32  DSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSAL 91

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G V+ +G    G LG    G  +  + PR+++SL   +V  ++ G +HT  VT  G
Sbjct: 92  VTKNGEVFTWGEESGGRLGH---GSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAG 148

Query: 337 RLFGFGD 343
            L+ +GD
Sbjct: 149 ELYTWGD 155


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 548

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 607

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 666

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 725 GSN--DQCQHFDTLRVTKPEP 743



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 732

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 21/339 (6%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           +V++ G +  G LG G   T  V+ T I      +V+ VSA   HA  +   G V+  G+
Sbjct: 64  NVWAWGDNSEGQLGQGVADTNPVA-TPIQVKDLTNVISVSAGGVHALALKADGTVWAWGN 122

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N +   G  D   PI  PR VE L+ +    + AGL F+  L+  G V   G+N + Q+ 
Sbjct: 123 NETDQLG-VDQASPIAIPRQVEGLQNIVA--IAAGLEFSLALSSDGKVWAWGANEYKQIN 179

Query: 137 H-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           +  D +   TP+ +     +  VV+IAAG ++ LA+  +G V+++G+     +G+ +Q  
Sbjct: 180 YFSDAIKIATPQIV---NNLSGVVKIAAGSAWCLALKNDGTVWTWGA-QKVPMGNDDQDG 235

Query: 196 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           E+        +  GI  V+ VSAG  H +AL   G V+ WG      LG  D+     P 
Sbjct: 236 EVT-NITNLTQINGISDVISVSAGYSHSLALKGDGTVWGWGSNELLQLGSHDQQWFDSPV 294

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +S LK+     V A    T  L + G+V+  G   +G LG    G+    L P     +
Sbjct: 295 QISPLKN--VTTVSAGAYLTMALTNDGTVWTLGGNIYGQLG---NGIKADSL-PITAYPV 348

Query: 315 RAHHVSQ---ISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +A +++Q   IS G Y   +    G ++G+GDN + QLG
Sbjct: 349 KASNITQATSISAG-YGFALGRALGSVWGWGDNSKGQLG 386



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 16/270 (5%)

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEV 155
           +A       Q+ AG NF   +  +G+V   G N+ GQLG G  DT    TP  +   +++
Sbjct: 39  DARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVATPIQV---KDL 95

Query: 156 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
            +V+ ++AG  + LA+  +G V+++G+     LG  +      PR ++  +    ++V +
Sbjct: 96  TNVISVSAGGVHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQ----NIVAI 151

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           +AG E  +AL S G V+ WG      + +  D I    P+ +++L     V++ A     
Sbjct: 152 AAGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLSG--VVKIAAGSAWC 209

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-HHVSQISTGLYHTVVVT 333
             L + G+V+ +G      +G  D+    +V     L  +     V  +S G  H++ + 
Sbjct: 210 LALKNDGTVWTWGAQKV-PMGNDDQ--DGEVTNITNLTQINGISDVISVSAGYSHSLALK 266

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             G ++G+G NE  QLG    +    P +I
Sbjct: 267 GDGTVWGWGSNELLQLGSHDQQWFDSPVQI 296



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 145/309 (46%), Gaps = 23/309 (7%)

Query: 49  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCK 106
           AA   Q++A  N    V   G V+  GDNS    G    DTN P+  P  V+ L  V   
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTN-PVATPIQVKDLTNVIS- 100

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 165
            V+AG      L   G V   G+N   QLG    +D+ +P +I   +E + ++V IAAG 
Sbjct: 101 -VSAGGVHALALKADGTVWAWGNNETDQLG----VDQASPIAIPRQVEGLQNIVAIAAGL 155

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVA 224
            + LA++ +G V+++G+     + +     ++  P+ +         VV+++AG    +A
Sbjct: 156 EFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLS----GVVKIAAGSAWCLA 211

Query: 225 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGS 282
           L + G V+TWG      +G+ D+  + T    L+ +      + V A    +  L   G+
Sbjct: 212 LKNDGTVWTWGAQKV-PMGNDDQDGEVTNITNLTQINGISDVISVSAGYSHSLALKGDGT 270

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V+G+G      LG  D+   D    P  +  L+  +V+ +S G Y T+ +T+ G ++  G
Sbjct: 271 VWGWGSNELLQLGSHDQQWFDS---PVQISPLK--NVTTVSAGAYLTMALTNDGTVWTLG 325

Query: 343 DNERAQLGH 351
            N   QLG+
Sbjct: 326 GNIYGQLGN 334


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 262 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 320

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 321 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 379

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 437

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 438 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 497

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 498 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 554

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           F +G     +LGH        PT
Sbjct: 555 FTWGKGANGRLGHGDTEDKRTPT 577



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 375

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 117
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 434

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 493

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 494 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 551

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 552 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 583



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 285

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 187
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 286 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 344

Query: 188 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 345 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 403

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 298
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 404 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 462

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 463 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 522



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 142/345 (41%), Gaps = 36/345 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 264 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 316

Query: 54  QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 317 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 375

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +   T  G + T G    G LGHG+      PK +  L  + + V++A    +  A+
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKT-VKVACSIWHTAAI 434

Query: 172 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 492

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 280
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 493 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 551

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             V+ +G    G LG  D   ++    P ++++LR  HV  +S G
Sbjct: 552 SEVFTWGKGANGRLGHGD---TEDKRTPTLVEALRDRHVKSLSCG 593



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 370 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 427

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 428 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 486

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 487 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 544

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 545 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 598

Query: 228 SGYVYTWGKG 237
           S  ++ W  G
Sbjct: 599 SICIHKWVSG 608


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 5/260 (1%)

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKT 74

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVV 213
           +   + ++ G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI ++
Sbjct: 75  LKFNL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--TGIKII 131

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKR 272
           +VS G  H +AL     V++WGK   G LG G E+  +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGA 191

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 333 TDRGRLFGFGDNERAQLGHD 352
           +  G++F FGDN   QLG++
Sbjct: 252 SQDGKVFTFGDNSSGQLGYN 271



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H LL+ +NSSV SCG +  G LG         PE  Q +   + N       
Sbjct: 26  LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G  L  + +P+ +  LE +  V Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI-PVAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 14/299 (4%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDL-PEPVQALKTLKFNLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G E   +  P+ +++   +GI V +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL--EGIPVAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVF 258

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
            FG    G LG+     + K   P+I++ +    VSQI  G  HT+  V   G++  FG
Sbjct: 259 TFGDNSSGQLGY---NPTPKKRGPQIVERIDG-LVSQIDCGGDHTIAYVHTTGQVVSFG 313


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 213
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 272
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 333 TDRGRLFGFGDNERAQLGH 351
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 229 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 286 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 211
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 270
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRG 356
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 58
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 178 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 221 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 336
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 337 RLFGFG 342
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 60  NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 159
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 160 QIAAGPS 166
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 9/227 (3%)

Query: 126 TCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           + G    GQLG  D     + P P+ +    E+   V++A G S+ LA+TG+G VYSFG 
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQ 61

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G+   LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G L
Sbjct: 62  GTFGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQL 119

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G G   +   P P+++L   L  QV      T  +   G ++ +   G G  G    G  
Sbjct: 120 GCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSW---GHGHWGQTGHGTQ 176

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           D +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 177 DNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 233 TWGK 236
            WG 
Sbjct: 214 AWGD 217



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 178 YSFG 181
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 231 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           + +WG G  G LG  D     +  LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 154
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 213
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 272
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 333 TDRGRLFGFGDNERAQLGH 351
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 229 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 286 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 342 G 342
           G
Sbjct: 313 G 313


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 345 ERAQLGHDTLR 355
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 5   TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 158/364 (43%), Gaps = 16/364 (4%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G+YH+L +  + +V++ G +L G LG G          +   P    VV VSA  
Sbjct: 251 VAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPK-QVPGLGGVVAVSAGF 309

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V   G V+  G+N     G             V+ L       V AG   +  + 
Sbjct: 310 YHSLVVRSDGTVWAWGNN---AYGQLGGGSRAHAASPVQVLGVSGAVAVAAGYRHSLVVN 366

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   GSN  GQ G G     PTP  +  L     VV +AAG  ++LA+  +G V++
Sbjct: 367 SDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLS---GVVSVAAGGGHVLALLSDGTVWA 423

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  ++  LG G +H    PR +         VV V+AG    +A+   G V++WG    
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELS----GVVAVAAGSSFSLAVRYDGSVWSWGDNAY 479

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHG     ++P  +  L     V V A       +   G+V+G+G+  +G LG    
Sbjct: 480 GQLGHGSTDASSVPLHVRELSE--VVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFE 537

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G+S +   P  +  L    +  ++    H++ V   G ++ +G+N  ++LG  T    L 
Sbjct: 538 GISARRYSPVQVPGLSG--MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLV 595

Query: 360 PTEI 363
           P  +
Sbjct: 596 PLRV 599



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 161/354 (45%), Gaps = 25/354 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ SV++ G++  G LG  PE    V + R+   S   VV V+A +
Sbjct: 201 VSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPW-RVEDVSG--VVAVAAGQ 257

Query: 60  NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  V   G V+  GDN       G  + N   + P+ V  L GV    V+AG   +  
Sbjct: 258 YHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSR-WLPKQVPGLGGVVA--VSAGFYHSLV 314

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +   G V   G+N +GQLG G      +P  +     V   V +AAG  + L V  +G +
Sbjct: 315 VRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVL---GVSGAVAVAAGYRHSLVVNSDGTL 371

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGK 236
           +++GS  +     G++ D    R     R  G+  VV V+AG  HV+AL S G V+ WG 
Sbjct: 372 WAWGSNLD-----GQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWAWGD 426

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G    + +P  +  L     V V A    +  +   GSV+ +G   +G LG 
Sbjct: 427 NASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGH 484

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                S   L  R L  + A     ++ G  H + V   G ++G+G N+  QLG
Sbjct: 485 GSTDASSVPLHVRELSEVVA-----VAAGSMHALAVRADGTVWGWGFNDYGQLG 533



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 166/379 (43%), Gaps = 27/379 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ SV++ G +  G LG G    + V    +     + VV V+A  
Sbjct: 151 VSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVP---VQVTGLSGVVSVAAGG 207

Query: 60  NHAAFVLQSGQVFTCGDNSSF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           NH+  V   G V+  G+N+S    G  +   P+  P  VE + GV    V AG   +  +
Sbjct: 208 NHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPV--PWRVEDVSGVVA--VAAGQYHSLAV 263

Query: 119 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
              G V   G N +GQLG G  +   R  PK +  L   G VV ++AG  + L V  +G 
Sbjct: 264 RYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGL---GGVVAVSAGFYHSLVVRSDGT 320

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G+ +   LG G +     P  +Q     G   V V+AG  H + ++S G ++ WG 
Sbjct: 321 VWAWGNNAYGQLGGGSRAHAASP--VQVLGVSG--AVAVAAGYRHSLVVNSDGTLWAWGS 376

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G  G G       P  +  L     V V A       L+  G+V+ +G    G LG 
Sbjct: 377 NLDGQRGDGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLG- 433

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G       PR +  L    V  ++ G   ++ V   G ++ +GDN   QLGH +   
Sbjct: 434 --DGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDA 489

Query: 357 CLEPTEIFIQEMEEDTGLA 375
              P  + ++E+ E   +A
Sbjct: 490 SSVP--LHVRELSEVVAVA 506



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 16/241 (6%)

Query: 118 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           L +R  G V T G N HGQLG G TL R TP  +  L  V +V   AAG  + LA+  +G
Sbjct: 61  LAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAV---AAGHGHSLALRYDG 117

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G+ +   LG   + +   P  +Q     G  VV V AGD H +A+ S G V+ WG
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWG 173

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           +   G LG G   D+ +P  ++ L     V V A    +  +   GSV+ +G    G LG
Sbjct: 174 RNTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLG 231

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
                      R   +  + A     ++ G YH++ V   G ++ +GDN   QLG   L 
Sbjct: 232 GAPEAAYPVPWRVEDVSGVVA-----VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 356 G 356
           G
Sbjct: 287 G 287



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 136/304 (44%), Gaps = 15/304 (4%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  V   G V+T G N     G   T      P  V+ L GV    V AG   +  L  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGD-GTTLSRRTPVQVQGLSGVAA--VAAGHGHSLALRY 115

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G+N +GQLG     +R  P  +  L     VV + AG ++ LAV  +G V+++
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLS---GVVSVVAGDTHSLAVRSDGSVWAW 172

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G  ++  LG G + D   P  +Q     G  VV V+AG  H +A+ S G V+ WG    G
Sbjct: 173 GRNTSGQLGDGTRDDRAVP--VQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASG 228

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG   E    +P  +  +     V V A +  +  +   G+V+ +G   +G LG     
Sbjct: 229 QLGGAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            + + L P+ +  L    V  +S G YH++VV   G ++ +G+N   QLG  +      P
Sbjct: 287 GNSRWL-PKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASP 343

Query: 361 TEIF 364
            ++ 
Sbjct: 344 VQVL 347



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L +  + +V++ G++  G LG      + V    +     + VV V A + H
Sbjct: 103 VAAGHGHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVP---VQVTGLSGVVSVVAGDTH 159

Query: 62  AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  V   G V+  G N+S     G RD +R +  P  V  L GV    V AG N +  + 
Sbjct: 160 SLAVRSDGSVWAWGRNTSGQLGDGTRD-DRAV--PVQVTGLSGV--VSVAAGGNHSLAVR 214

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G+N  GQLG       P P  +   E+V  VV +AAG  + LAV  +G V++
Sbjct: 215 SDGSVWAWGNNASGQLGGAPEAAYPVPWRV---EDVSGVVAVAAGQYHSLAVRYDGTVWA 271

Query: 180 FGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +G      LG G  E +    P+ +         VV VSAG  H + + S G V+ WG  
Sbjct: 272 WGDNLYGQLGDGKLEGNSRWLPKQVPGLG----GVVAVSAGFYHSLVVRSDGTVWAWGNN 327

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G         P+  L    AV V A  R + V+   G+++ +G    G  G  
Sbjct: 328 AYGQLGGGSRAHAA--SPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRG-- 383

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G   +   P  +  L    V  ++ G  H + +   G ++ +GDN   QLG  T    
Sbjct: 384 -DGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSR 440

Query: 358 LEPTEI 363
             P ++
Sbjct: 441 WVPRQV 446



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 165/399 (41%), Gaps = 64/399 (16%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L++ S+ ++++ GS+L G  G G  T      T    P  + VV V+A  
Sbjct: 353 VAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYP---TPGRVPGLSGVVSVAAGG 409

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +L  G V+  GDN+S   G   T    + PR V  L GV    V AG +F+  + 
Sbjct: 410 GHVLALLSDGTVWAWGDNASGQLGD-GTRHSRWVPRQVPELSGVVA--VAAGSSFSLAVR 466

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G N +GQLGHG T     P  +  L EV   V +AAG  + LAV  +G V+ 
Sbjct: 467 YDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSEV---VAVAAGSMHALAVRADGTVWG 523

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G      LG G   + +  R     +  G+  +V V+A   H +A+ + G V+ WG   
Sbjct: 524 WGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNT 581

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
              LG G    + +P  +++  +     + A    +  +   GS++ +G    G LG  D
Sbjct: 582 DSELGDGTTTRRLVPLRVNAPGT--VALLSAGYNYSMAMRADGSLWAWGTNFAGQLG--D 637

Query: 299 RGVSDKVLRPRILDSLRA------------------------------------HH---- 318
              + + +  R+   +RA                                    HH    
Sbjct: 638 GSTTSRAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPV 697

Query: 319 -------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                  V  +   L  ++ V   G L+ +G+N+  QLG
Sbjct: 698 RVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 263 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 321

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 322 EYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVAVACGTWHS 380

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---- 224
              T NG +++FG G    LGHG +     P+ +Q     G   ++V+ G  H  A    
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLL--SGYKAIKVACGVWHSAAIIDV 438

Query: 225 LDSSG------YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           +D SG       ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 498

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G   +G LG P+   SD  +   + D L    V +IS G  H  V+T R  L
Sbjct: 499 ASGHVFSMGGTTYGQLGNPN---SDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSEL 555

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH        PT
Sbjct: 556 YTWGRGANGRLGHGDTDDKKSPT 578



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YH+  +S S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 318 VACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVAVACG 376

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG------ 111
             H+A    +G++FT GD      GH   NR  +  P+ V+ L G    +V  G      
Sbjct: 377 TWHSALATSNGKLFTFGDGRFGVLGH--GNRASVAYPKEVQLLSGYKAIKVACGVWHSAA 434

Query: 112 ----LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
               ++ +G       + T G     +LGH +      P  +A + E  +  Q+A G + 
Sbjct: 435 IIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEY-NFHQVACGYTM 493

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A+T +G V+S G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S
Sbjct: 494 TVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRD-KLVGEFVEEISCGANHVAVLTS 551

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              +YTWG+G  G LGHGD  DK  P  + +LK
Sbjct: 552 RSELYTWGRGANGRLGHGDTDDKKSPTLVEALK 584



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 13/271 (4%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G      +T +G V T G ++ G+LGHG   D   P  + 
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  + +V  +A G  +  AV+ +G ++++G G++    LGHG       P+ + +   +
Sbjct: 309 SLA-ITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRV-SGPLE 366

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ VV V+ G  H     S+G ++T+G G  G LGHG+      P+ +  L  + A++V 
Sbjct: 367 GLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVA 426

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                +  ++D   + G        F W G G          +  L P  + ++  ++  
Sbjct: 427 CGVWHSAAIIDVMDLSGSKASAKRLFTW-GDGDQYRLGHANKETYLEPTCVAAVAEYNFH 485

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           Q++ G   TV +T  G +F  G     QLG+
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGN 516



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 371 VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACG 428

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H+A ++           + ++FT GD   +  GH +       P  V A+      QV
Sbjct: 429 VWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN-KETYLEPTCVAAVAEYNFHQV 487

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G   T  LT  GHV + G  T+GQLG+ ++ D   P  +   + VG  V+ I+ G ++
Sbjct: 488 ACGYTMTVALTASGHVFSMGGTTYGQLGNPNS-DGKVPILVRD-KLVGEFVEEISCGANH 545

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           +  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  +S G
Sbjct: 546 VAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR--HVKNISCG 594



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 248 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 305

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 311
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 306 LVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 362

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 363 GPLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEV 414



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  VFS G +  G LG+ P +   V     +      V ++S   N
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRDKLVGEFVEEISCGAN 544

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +++T G  ++   GH DT+     P LVEALK    K ++ G  FT  + +
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDKK-SPTLVEALKDRHVKNISCGSTFTSCICL 603

Query: 121 RGHV 124
              V
Sbjct: 604 HKWV 607


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 545

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 117
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 542

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 574



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 187
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 188 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 298
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 453

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 142/345 (41%), Gaps = 36/345 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 54  QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +   T  G + T G    G LGHG+      PK +  L  + + V++A    +  A+
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKT-VKVACSIWHTAAI 425

Query: 172 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 483

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 280
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 542

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             V+ +G    G LG    G ++    P ++++LR  HV  +S G
Sbjct: 543 SEVFTWGKGANGRLG---HGDTEDKRTPTLVEALRDRHVKSLSCG 584



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 535

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 589

Query: 228 SGYVYTWGKG 237
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 211
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 270
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRG 356
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 58
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 119 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 178 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 161
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 221 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 336
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 337 RLFGFG 342
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 60  NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 159
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 160 QIAAGPS 166
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 2    QITTGRYHTLLISNSSV-FSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 58
            ++  G+  T +I+N+ V  SCG    G LG G   ++ +    + +       +   + S
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            + HA  + ++G+VF+ GD      GH +++R   RPR +EAL+G    QV  G   +  +
Sbjct: 844  DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVV 902

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 177
            TI G + T G   +G+LGHG T ++  P+ +  LE    + Q+A G ++ + V+  N  V
Sbjct: 903  TIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENY-IIGQVACGLNHTVIVSQDNLTV 961

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++ G G    LG G    +  P  I+   R GI   ++S G +   AL   G ++ +G+ 
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIK--KISCGAQFTAALTWDGKLFMFGQD 1019

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
                           P+ +++L SH  + +      T  L   G VY +G    G LG  
Sbjct: 1020 RMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGL- 1078

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
              G ++ V  P +++SL   ++ QIS G  H+
Sbjct: 1079 --GHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 60/327 (18%)

Query: 91   IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
            +  P+L ++      ++V  G N T  +   G V +CG  ++G+LG G++ D      I+
Sbjct: 770  VLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 151  PLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
             L+  G +V+  A  +    + +A+T NG V+S+G G    LGHG    + +PR I+  R
Sbjct: 828  ALQ--GFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 885

Query: 207  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
              G  VV+V+ G +H   +   G ++T+G G  G LGHG   +K +PE + +L++++  Q
Sbjct: 886  --GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQ 943

Query: 267  V-CARKRKTFVLVDTGSVYGFGWMGFGSLGF----------------------------- 296
            V C       V  D  +V+  G   +G LG                              
Sbjct: 944  VACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQF 1003

Query: 297  --------------PDRGVSDKVLR------PRILDSLRAHHVSQISTGLYHTVVVTDRG 336
                           DR   +   R      P+++ +L +HH+  IS G  HT+ +T +G
Sbjct: 1004 TAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKG 1063

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEI 363
             ++ +G N   QLG        EPT +
Sbjct: 1064 IVYTWGSNTDGQLGLGHTNHVQEPTLV 1090



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 11/243 (4%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+  G+  HGQL    +     P+      E   VV    G +    +  NGVV S G G
Sbjct: 752 VYLFGAGRHGQLAEVGS-GVLVPQLTKSFHEARKVV---CGQNCTFIINNNGVVLSCGEG 807

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 242
           S   LG G   D  +   I   +   +  +  S G D H +AL  +G V++WG G  G L
Sbjct: 808 SYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKL 867

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           GHG+   +  P  + +L+    VQV C  K    V +D G ++ FG+  +G LG      
Sbjct: 868 GHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID-GKLFTFGYGDYGRLGHG--ST 924

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEP 360
           ++K +  R++ +L  + + Q++ GL HTV+V+ D   ++  GD +  +LG         P
Sbjct: 925 TNKKIPERVM-ALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSP 983

Query: 361 TEI 363
           T+I
Sbjct: 984 TKI 986


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  115 bits (288), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 92/302 (30%), Positives = 141/302 (46%), Gaps = 15/302 (4%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           V +S  + H A V  +G+++  G N       G ++T R   +P  V+ALK    K    
Sbjct: 42  VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR---KPTCVKALKPEKTKLAVC 98

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 158

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGE 214

Query: 231 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +TG VY FG 
Sbjct: 215 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEH-TVVLTETG-VYTFGL 272

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG         V  P+ +  LR+H +  ++ G  HT V+ + G +F FGD    +
Sbjct: 273 GQYGQLGHGTLLFKTSV--PKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGK 330

Query: 349 LG 350
           LG
Sbjct: 331 LG 332



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSA 157

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            V + GQ+F  GDNS    G  D    +  P  V+   G P   ++ G   + F+T  G 
Sbjct: 158 AVTEDGQLFVWGDNSEGQIGLADKT-CVSVPCQVDV--GKPVSSISCGYYHSAFITGDGE 214

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 180
           ++T G   +G+LG    L      S  P   +G    V ++A G  + + +T  GV Y+F
Sbjct: 215 LYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV-YTF 270

Query: 181 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G G    LGHG    +   P++++  R   IH   V+ G+ H   +  +G ++T+G G  
Sbjct: 271 GLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIH--NVTCGESHTAVIAENGLMFTFGDGRH 328

Query: 240 GALGHGDE 247
           G LG G+E
Sbjct: 329 GKLGLGEE 336



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 27/258 (10%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVVQIAA 163
            ++ G   T  +T  G ++  GSN  GQLG G  +T+ +PT  K++ P +   +V     
Sbjct: 43  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV----C 98

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G ++ L  T  G VY+ G  S   LG G+  +      I  F  +   + +++AG     
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQH-KIKQLAAGSYTSA 157

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLP------EPLSSLKSHLAVQVCARKRKTFVL 277
           A+   G ++ WG    G +G  D+   ++P      +P+SS+        C      F+ 
Sbjct: 158 AVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSIS-------CGYYHSAFIT 210

Query: 278 VDTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            D G +Y FG    G LG  P++  + +V +P +L  +    V++++ G  HTVV+T+ G
Sbjct: 211 GD-GELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEK--VNKVACGGEHTVVLTETG 266

Query: 337 RLFGFGDNERAQLGHDTL 354
            ++ FG  +  QLGH TL
Sbjct: 267 -VYTFGLGQYGQLGHGTL 283


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 39/355 (10%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           +F+ G +  G L  G +  +C +   +       V  +S+  NH+  V Q GQ+F CG  
Sbjct: 17  LFAWGRNKDGELSIGNQK-KCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSA 75

Query: 78  SSFCCGHRDTNRPIFRPR--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                G  D N+P + P+  LV+A+KG+   QV  G   T  L   G V+  G   H +L
Sbjct: 76  LHGKLGFEDANQPSY-PKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG----SNFCLGHG 191
           G         P  I  L++  ++VQI  G  +  A++ NG +Y++G G    +   LGHG
Sbjct: 135 GS----KAGKPARIETLKQ--TIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHG 188

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
             +D   P+ ++       ++V+ S G  H++ALD  G +++WG G  G  G G+  D  
Sbjct: 189 HLNDVETPQIVKD------NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 252 LPE--PLSSLKSHLAVQVCARKRK--------------TFVLVDTGSVYGFGWMGFGSLG 295
           LP+   ++  + H+ +     + K              + +L + G VY  G+   G LG
Sbjct: 243 LPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLG 302

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                  +K    +++  +    + QI+ G  H++V+T    ++  G N+  QLG
Sbjct: 303 IKATENQNKF---QLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLG 354



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 34/355 (9%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           I++G  H+ ++  +  +F CGS+L G LG           F  +       V QV+  + 
Sbjct: 53  ISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDY 112

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +L +GQV+  G        H+       +P  +E LK     Q+  G   +  L+ 
Sbjct: 113 HTLCLLDNGQVYAWGGTL-----HKKLGSKAGKPARIETLKQTIV-QIGCGDFHSAALSA 166

Query: 121 RGHVHTCG----SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            G ++T G        GQLGHG   D  TP+ +       ++V+ + G  +M+A+  +G 
Sbjct: 167 NGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD-----NIVKFSCGGYHMMALDKDGE 221

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGI-------------HVVRVSAGDEHV 222
           ++S+GSG     G GE  D L P+ ++  F +K I              +  +S G  H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           + L + G VY  G    G LG     ++   + +  +     VQ+ A    + VL     
Sbjct: 282 LLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSD 341

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           VY  G    G LG  D     +  R   L+  R   + Q+  G  H+  + D  +
Sbjct: 342 VYTCGHNQAGQLGVGDYESRTQYTRINFLEQRR---IKQLFAGGNHSWALIDYNQ 393



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 63/313 (20%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSA 57
           Q+ TG YHTL L+ N  V++ G +L   LG     P   + +  T         +VQ+  
Sbjct: 106 QVATGDYHTLCLLDNGQVYAWGGTLHKKLGSKAGKPARIETLKQT---------IVQIGC 156

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKGVPCKQV 108
            + H+A +  +G ++T G       G RD NR          +  P++V   K    K  
Sbjct: 157 GDFHSAALSANGDLYTWG------GGGRDYNRGQLGHGHLNDVETPQIV---KDNIVKFS 207

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI---------------APLE 153
             G +    L   G + + GS  +G+ G G+  D   PK +                  +
Sbjct: 208 CGGYHMMA-LDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNK 266

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR------ 207
           +  ++ +I+ G  + L ++  G+VY+ G           QH +L  +A +   +      
Sbjct: 267 QESTIKEISLGGHHSLLLSNKGIVYACGYA---------QHGQLGIKATENQNKFQLVIG 317

Query: 208 -KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
             G  +V+++AG  H + L S   VYT G    G LG GD   +T    ++ L+     Q
Sbjct: 318 ISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQ 377

Query: 267 VCARKRKTFVLVD 279
           + A    ++ L+D
Sbjct: 378 LFAGGNHSWALID 390



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           ++   G N  G+L  G+      PK++  L+   +V  I++G ++   VT +G ++  GS
Sbjct: 16  YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKN-QTVQLISSGSNHSGIVTQDGQLFICGS 74

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             +  LG  + +    P+ +     KG+ V +V+ GD H + L  +G VY WG      L
Sbjct: 75  ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG----FGSLGFPD 298
           G         P  + +LK  + VQ+      +  L   G +Y +G  G     G LG   
Sbjct: 135 GS----KAGKPARIETLKQTI-VQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLG--- 186

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G  + V  P+I+      ++ + S G YH + +   G L+ +G     + G    +  L
Sbjct: 187 HGHLNDVETPQIVKD----NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 359 EPT--------------EIFIQEMEEDT 372
            P               +IF+Q  +E T
Sbjct: 243 LPKKVKINFNQKHIIIDDIFVQNKQEST 270



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 10/136 (7%)

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AGD+  +      Y++ WG+   G L  G++     P+ +  LK+     + +    + +
Sbjct: 8   AGDDQQIT-----YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGI 62

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTD 334
           +   G ++  G    G LGF D   +++   P+ L   +++   V+Q++TG YHT+ + D
Sbjct: 63  VTQDGQLFICGSALHGKLGFED---ANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLD 119

Query: 335 RGRLFGFGDNERAQLG 350
            G+++ +G     +LG
Sbjct: 120 NGQVYAWGGTLHKKLG 135



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVV----- 53
           ++ + G YH + L  +  ++S GS + G  G G  + +      +INF +  H++     
Sbjct: 204 VKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINF-NQKHIIIDDIF 262

Query: 54  ----------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKG 102
                     ++S   +H+  +   G V+ CG       G + T N+  F+  LV  + G
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQ--LVIGISG 320

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
               Q+ AG N +  LT    V+TCG N  GQLG GD   R     I  LE+   + Q+ 
Sbjct: 321 KTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQR-RIKQLF 379

Query: 163 AGPSYMLAV 171
           AG ++  A+
Sbjct: 380 AGGNHSWAL 388



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ L S+S V++CG +  G LG G   ++   +TRINF     + Q+ A  
Sbjct: 324 VQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QYTRINFLEQRRIKQLFAGG 382

Query: 60  NHAAFVLQSGQ 70
           NH+  ++   Q
Sbjct: 383 NHSWALIDYNQ 393


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 18/361 (4%)

Query: 6    GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
            G  H L++S + +V++ G++  G LG G  TT   S  R+   SAA  + VS  + ++  
Sbjct: 907  GEAHALVVSQDGTVWAWGANGRGQLGDG-TTTSSASPVRVAGLSAA--MNVSVGQAYSLA 963

Query: 65   VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            VL  G V++ G N S   G   TN     P+ V+ L  V  K VTAG +    +   G V
Sbjct: 964  VLPDGTVWSWGANDSGQLGD-GTNVARTTPKPVQDLADV--KAVTAGAHHVVAVRHDGTV 1020

Query: 125  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
               G+N  GQ+G G    R  P  +   E + + V+ +AG  + LA+ G+    S+GS  
Sbjct: 1021 WGWGANAFGQVGDGTHFWRFRPVRV---EGLLNAVETSAGEQHSLALLGDERALSWGSHE 1077

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LG  E    L+P  ++    K  +  V VSA  +H  AL + G V TWG    G LG
Sbjct: 1078 YGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137

Query: 244  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
             G    +  P  ++ L + +AV   A  R T  L   G+V+ +G   FG LG  D   + 
Sbjct: 1138 DGTTESRATPITVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLG--DGSNTR 1193

Query: 304  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + L  +++       V+ I+ G YH++ V + G ++ +G N   QLG  T+     PT +
Sbjct: 1194 RTLPVQVVG---LEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRM 1250

Query: 364  F 364
             
Sbjct: 1251 L 1251



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 175/418 (41%), Gaps = 79/418 (18%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 54
           + +  G +H+L L ++ +V++ GS+  G LG G     P   Q V  T         VV 
Sbjct: 152 VAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLT--------GVVA 203

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           ++A  + +  V   G V+  G N S   G   T      P  V  L+GV    VTAGL  
Sbjct: 204 LAAGFDFSLAVRSDGTVWAWGANGSGQLGD-GTYIQRLAPTQVSQLQGVSA--VTAGLYH 260

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---------KSIA--------------- 150
              L   G V   GSN+ GQ+G G   DRP+P         K++A               
Sbjct: 261 ALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGV 320

Query: 151 -------------------PL----EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
                              PL      +G+V  +AAG  + + +  +G ++++G G+   
Sbjct: 321 FAWGLNSQGQLGIGTTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQ 380

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGHG     L P  +        +V  V++G  H VA  S G V+TWG+   G LG G  
Sbjct: 381 LGHGSSERMLSPEVVTRLS----NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTT 436

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            ++ LP  +  L     V V A    +F L   G+V+G+G    G +G  D    D+   
Sbjct: 437 TERHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNAQGQMG--DGTTKDRASP 492

Query: 308 PRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            R+  L S++A     +++G  H V +   G ++ +G N   QLG  T      P ++
Sbjct: 493 ARVEGLSSVKA-----LASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQV 545



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 148/360 (41%), Gaps = 62/360 (17%)

Query: 49  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQ 107
           A+   +V+A   H+ +V Q+G V+  G N S   G   T    F+  + + + G+     
Sbjct: 47  ASATSKVAAGAQHSLYVTQAGTVWAWGGNGS---GQLGTGSVSFQRVVAQQVPGLTDVTS 103

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV------------ 155
           + AG   +  L     V T G N  GQ+G G  +DRPTP+ +  L +V            
Sbjct: 104 IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLA 163

Query: 156 ----------GS-------------------------VVQIAAGPSYMLAVTGNGVVYSF 180
                     GS                         VV +AAG  + LAV  +G V+++
Sbjct: 164 LRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAW 223

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G+  +  LG G     L P  +   +     V  V+AG  H +AL S G V+ WG    G
Sbjct: 224 GANGSGQLGDGTYIQRLAPTQVSQLQ----GVSAVTAGLYHALALRSDGTVWAWGSNSSG 279

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            +G G   D+  P P+       A  V A+   + VL+D G V+ +G    G LG     
Sbjct: 280 QMGDGTWTDR--PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTA 337

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            S   +R R L +     V+ ++ G  H VV+   G L+ +G     QLGH +    L P
Sbjct: 338 DSPLPVRVRGLGA-----VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSP 392



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 22/356 (6%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +T G +H + +  + +V+  G++  G +G G   T    F  +      + V+ SA E H
Sbjct: 1004 VTAGAHHVVAVRHDGTVWGWGANAFGQVGDG---THFWRFRPVRVEGLLNAVETSAGEQH 1060

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFL 118
            +  +L   +  + G +     G  ++  P   P   +L  +   VP   V+A       L
Sbjct: 1061 SLALLGDERALSWGSHEYGQLGDAESG-PSLEPVGVKLPSSKVLVPAVSVSAWHQHAAAL 1119

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               G V T G N  GQLG G T  R TP ++A L   G++V +A    + LA+  +G V+
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGL---GAMVAVAPAARHTLALRSDGTVW 1176

Query: 179  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            ++G  +   LG G       P  +    +    V  ++AG  H +A+   G V+ WG   
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEK----VTAIAAGSYHSLAVREDGTVWAWGYNV 1232

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LG G    + +P  +  L    AV V   +  + +L   G+++  G    G LG   
Sbjct: 1233 FGQLGDGTMDARAVPTRMLGLDG--AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLG--- 1287

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
             G     L P     +    V  +  G YH+V + + G ++ +G N + QLG  T+
Sbjct: 1288 EGTFTNRLSP--FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTV 1341



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 24/356 (6%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           +L+ +  VF+ G +  G LG G   T   S   +       V  ++A   HA  +   G 
Sbjct: 313 VLLDDGGVFAWGLNSQGQLGIG---TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGT 369

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           ++T G  ++   GH  + R +  P +V  L  V    V +G   +      G V T G N
Sbjct: 370 LWTWGHGATGQLGHGSSER-MLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRN 426

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           T+GQLG G T +R  P  +  L     VV ++A   +  A+  +G V+ +G  +   +G 
Sbjct: 427 TNGQLGDGTTTERHLPVRVPGLS---GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD 483

Query: 191 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           G   D   P      R +G+  V+ +++G  H+VAL + G V+TWG    G LG G   D
Sbjct: 484 GTTKDRASPA-----RVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTD 538

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRP 308
           +  P  ++ L       V A    +  L   G+V+ +G  GF G LG    G   +   P
Sbjct: 539 RRAPVQVTGLSG--VTSVAAGAYFSLALRTDGTVWAWG-DGFEGQLG---DGAGVQRASP 592

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
             +  L    V +++ G  H + V D G ++ +GDN   Q+G  +        +++
Sbjct: 593 VQVTGLT--RVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVY 646



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 25/351 (7%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G +H++  +S+ SV++ G +  G LG G  T + +    +  P  + VV VSAS +H
Sbjct: 404 VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP---VRVPGLSGVVSVSASGHH 460

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +   G V+  G N+    G   T +    P  VE L  V  K + +G +    L   
Sbjct: 461 SFALRSDGTVWGWGRNAQGQMGD-GTTKDRASPARVEGLSSV--KALASGGSHMVALRTD 517

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V T G N  GQLG G T DR  P  +  L  V SV   AAG  + LA+  +G V+++G
Sbjct: 518 GTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV---AAGAYFSLALRTDGTVWAWG 574

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LG G       P  +    R    VV+++AG  H +A+   G V+ WG    G 
Sbjct: 575 DGFEGQLGDGAGVQRASPVQVTGLTR----VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           +G G   D+     +  L       V      +  L   G++  +G   +G   F D GV
Sbjct: 631 MGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLRAWGGNAYGQ--FGDGGV 686

Query: 302 SDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           + +V+   +  L  ++    S +     H + V + G L  +G N   QLG
Sbjct: 687 TPRVVAGAVPGLSGIKLLGASYL-----HVLAVREDGMLLTWGYNRFGQLG 732



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 15/284 (5%)

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD- 139
           C G      P   P            +V AG   + ++T  G V   G N  GQLG G  
Sbjct: 26  CEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSV 85

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
           +  R   + +  L +V S   IAAG ++ LA+  +  V+++G  +   +G G   D   P
Sbjct: 86  SFQRVVAQQVPGLTDVTS---IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTP 142

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           + +         VV V+AG+ H +AL + G V+ WG  + G LG G    +  P P   +
Sbjct: 143 QKVPGLS----DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHS--QPGPSPAQVV 196

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
                V + A    +  +   G+V+ +G  G G LG    G   + L P  +  L+   V
Sbjct: 197 GLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLG---DGTYIQRLAPTQVSQLQG--V 251

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           S ++ GLYH + +   G ++ +G N   Q+G  T      P ++
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQV 295



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G YH+L +  + +V++ G ++ G LG G    + V    +    A   V V+  E H
Sbjct: 1209 IAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGA---VAVAGGEYH 1265

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +  +   G ++  G+NS    G    TNR    P  V  L  V  + V AG   +  L  
Sbjct: 1266 SLMLRFDGTLWATGNNSHGQLGEGTFTNR--LSPFQVVELDQV--RTVRAGGYHSVALRE 1321

Query: 121  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
             G V T G N  GQLG G    R  P   AP+  + ++  + AG S+  AV      +++
Sbjct: 1322 DGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSHTFAVGSE--TWAW 1376

Query: 181  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 239
            G  S+  LG G+  D L+P  +     KG+H V+ V AG +  VA  + G   +WG    
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLV-----KGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVH 1431

Query: 240  GALGHGDEIDKTLP 253
            G LG G    +T+P
Sbjct: 1432 GTLGIGLPGQRTVP 1445



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 144/352 (40%), Gaps = 21/352 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G YH++ L  + ++ + G +  G  G G  T + V+      P  + +  + AS  H
Sbjct: 654 VVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGA---VPGLSGIKLLGASYLH 710

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V + G + T G N     G          P  V  L     ++++AG   +  +   
Sbjct: 711 VLAVREDGMLLTWGYNRFGQLGLGAAGWSSL-PVQVRGLG--QGRRLSAGRAHSLLVRAD 767

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G NT GQLG G T  R +P     L         +AG  + L +  +G V+S+G
Sbjct: 768 GTVLAWGQNTSGQLGDGSTTHRASPVLARNLP---CARAASAGRQHSLVLACDGTVWSWG 824

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             S   LG G       P  ++        VV V AG +  + L + G V+TWG    G 
Sbjct: 825 GNSQGQLGDGGVTSRAYPAKVEGL----WGVVAVLAGGDSSMVLRADGTVWTWGANGSGQ 880

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G   D+  P  +  L   +A  V        V  D G+V+ +G  G G LG    G 
Sbjct: 881 LGDGTLGDRASPLEVKGLAG-IATGVMGEAHALVVSQD-GTVWAWGANGRGQLG---DGT 935

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           +     P  +  L A     +S G  +++ V   G ++ +G N+  QLG  T
Sbjct: 936 TTSSASPVRVAGLSA--AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 140/344 (40%), Gaps = 22/344 (6%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
            ++   L+++ +V + G +  G LG G   ++    T I       +V V+ +  H   + 
Sbjct: 1114 QHAAALLADGTVQTWGGNADGQLGDGTTESRA---TPITVAGLGAMVAVAPAARHTLALR 1170

Query: 67   QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
              G V+  GDN+    G     R    P  V  L+ V    + AG   +  +   G V  
Sbjct: 1171 SDGTVWAWGDNTFGQLGDGSNTRRTL-PVQVVGLEKVTA--IAAGSYHSLAVREDGTVWA 1227

Query: 127  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
             G N  GQLG G    R  P  +  L+     V +A G  + L +  +G +++ G+ S+ 
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLGLD---GAVAVAGGEYHSLMLRFDGTLWATGNNSHG 1284

Query: 187  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
             LG G   + L P   Q      +  VR  AG  H VAL   G V+TWG    G LG G 
Sbjct: 1285 QLGEGTFTNRLSP--FQVVELDQVRTVR--AGGYHSVALREDGTVWTWGHNGQGQLGDGT 1340

Query: 247  EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
               + +P P+  L +     V A    TF +      + +G    G LG  D   SD+ L
Sbjct: 1341 VTTRRVPAPVPGLTA--IASVGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDS--SDR-L 1393

Query: 307  RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             P ++  L  H V  +  G   +V     G    +G N    LG
Sbjct: 1394 EPTLVKGL--HGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLG 1435



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 27/365 (7%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G Y +L L ++ +V++ G    G LG G    +    + +       VV+++A   H
Sbjct: 554 VAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRA---SPVQVTGLTRVVKLAAGAAH 610

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
              V   G V+  GDN+    G    ++R  FR   V  L GV    V  GL  +  L  
Sbjct: 611 GLAVRDDGTVWAWGDNTEGQMGDGSWSDR--FRAVQVYGLTGV--SSVVGGLYHSMALAQ 666

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVY 178
            G +   G N +GQ G G    R    ++  L  +  +     G SY+  LAV  +G++ 
Sbjct: 667 DGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLL-----GASYLHVLAVREDGMLL 721

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LG G       P  ++   +      R+SAG  H + + + G V  WG+  
Sbjct: 722 TWGYNRFGQLGLGAAGWSSLPVQVRGLGQG----RRLSAGRAHSLLVRADGTVLAWGQNT 777

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G    +  P    +L    A    A ++ + VL   G+V+ +G    G LG  D
Sbjct: 778 SGQLGDGSTTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQLG--D 833

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            GV+ +   P  ++ L    V  +  G   ++V+   G ++ +G N   QLG  TL    
Sbjct: 834 GGVTSRAY-PAKVEGLWG--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRA 890

Query: 359 EPTEI 363
            P E+
Sbjct: 891 SPLEV 895



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 3    ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +  G YH++ L  + +V++ G +  G LG G  TT+ V       P    +  V A  +H
Sbjct: 1309 VRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSH 1365

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              F + S + +  G NS    G  D++  +  P LV+ L GV  K V AG +F+      
Sbjct: 1366 T-FAVGS-ETWAWGRNSHGQLGTGDSSDRL-EPTLVKGLHGV--KSVLAGGDFSVAQGAD 1420

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
            G   + G+N HG LG G    R  P ++
Sbjct: 1421 GSAMSWGTNVHGTLGIGLPGQRTVPGAV 1448


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 2   QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 57
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 58  SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 93
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 94  PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 152 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 311
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 51
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 52  ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 99
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 272
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 273 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 362 EI 363
            +
Sbjct: 598 AV 599



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 3   ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 62  AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 152
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 153 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 200
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 261 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 309 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 350 GHDTLRGCLEPT 361
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 173
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 174 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 204
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 205 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 317
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 37  QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 93
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 206
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
             + K+K  V                       GV      P +        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVV--------VTCCSAGA 261

Query: 327 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 363
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 97  VEALKGVPC---KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           ++A K V C     + +G + +  +T +G  +  G+  +G+LG G T +  TP      +
Sbjct: 682 MQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPK 741

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IH 211
            V  +  +AAG  + LA++ +G ++ +G   + C       + + PR       +G    
Sbjct: 742 GV-RLRSVAAGACHSLALSMDGDLWFWGRREDTC----STTNYMSPRIFMQLEGQGGVPK 796

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCA 269
           V  +SA + H +A+  +G V+ WG       G G    + L  PE ++ L S     V  
Sbjct: 797 VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVAT 855

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLG 295
             + +F ++ +G V+  G +  G LG
Sbjct: 856 GPQGSFFILASGEVFAAGVIKSGRLG 881



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 45.8 bits (107), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 212 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 267
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 268 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 303
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 304 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 361 TEIFI 365
             +++
Sbjct: 225 VRVYL 229


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 339 FGFGDNERAQLGHDTLRGCLEP 360
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 112
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 113 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 148/354 (41%), Gaps = 40/354 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 108
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
             G   +   T  G ++T G  T G LGHGD      PK +  L    ++ ++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTI-KVACGIWHS 427

Query: 169 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 16/293 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                +  +V+  +  G        + W G G       G  +  L P+ + +L  ++  
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTW-GDGDKNRLGHGDKEPRLVPKCVQALLEYNFH 480

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           Q++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 481 QLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 36/361 (9%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+S G +  G LG G    + +   R+       V+ +S+   H+  V + G+++ CG N
Sbjct: 86  VWSFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 78  SSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
                G       ++  F+P  VE L  +  KQV  G   T  L+  G V+  G + H +
Sbjct: 145 LHDKLGLEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNK 202

Query: 135 LGHGDTLDRPTPKSIAPLEEV---GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
            G      +   K    L +      + QI  G  + LA+  NG +YS+G G     GHG
Sbjct: 203 RGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHG 262

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           +  D+  P+ I+ F   G  + ++ AG+ H +A+ +   VY WG G  G  G G+  +  
Sbjct: 263 KFEDQETPQRIKFF--DGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTA 320

Query: 252 LP---------------------EPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWM 289
           +P                     E L   K    + Q+ A +  T VL  +G ++ FG+ 
Sbjct: 321 IPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYN 380

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G LG       D   RP++++ +  H   Q++ G  H++ +T++  ++  G+N+  Q 
Sbjct: 381 QQGQLG---HNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQC 437

Query: 350 G 350
           G
Sbjct: 438 G 438



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 29/315 (9%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V++ G N+    G    N  +  P  V  L  +    +++G   +G +T  G +  CGSN
Sbjct: 86  VWSFGQNTKGELGTGHYNE-VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
            H +LG  + +   + K+  P+E +  +   Q+A G  + LA++  G VY +G   +   
Sbjct: 145 LHDKLGL-EGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKR 203

Query: 189 GHGEQ----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           G   Q    + + +P  +Q+F   G  + ++  GD H +ALD +G +Y+WG G  G  GH
Sbjct: 204 GDRSQERKDNAKYKPVLLQSF--AGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG-----FGWMGFGS------ 293
           G   D+  P+ +      +  Q+ A    T  +     VY      +G  GFG       
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAI 321

Query: 294 ---LGFPDRGVS----DKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
              + FP +G +    D  ++  IL+  +    + QI+ G  HT+V+T  G++F FG N+
Sbjct: 322 PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQ 381

Query: 346 RAQLGHDTLRGCLEP 360
           + QLGH+T+     P
Sbjct: 382 QGQLGHNTVDNYCRP 396



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 30/355 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G++  L+  +  ++ CGS+L   LG  G  T    +F  +   +   + QV+  + H   
Sbjct: 126 GKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLA 185

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRP---IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           + + GQV+  G +     G R   R     ++P L+++  G   KQ+  G   +  L   
Sbjct: 186 LSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDN 245

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 180
           G +++ G    G+ GHG   D+ TP+ I   +  G ++ QI AG  + LA+T +  VY++
Sbjct: 246 GTLYSWGVGEKGECGHGKFEDQETPQRIKFFD--GKIITQIEAGNHHTLAITADNQVYAW 303

Query: 181 GSGSNFCLGHGEQHDELQPR--------------------AIQTFRRKGIHVVRVSAGDE 220
           G G     G GE  +   P+                     I  F +    + +++AG+ 
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEM 363

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H + L SSG ++++G    G LGH    +   P+ +  + +H  VQV A +  +  L + 
Sbjct: 364 HTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNK 423

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
             VY  G   +G  G PDR +        +L SL + +  ++  G +H+ VV D 
Sbjct: 424 NDVYACGNNQYGQCGLPDREMRKTF--SHVL-SLLSVNSFKLYAGGFHSWVVLDE 475


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 31  HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR- 89
            GP +T   S+  +  PS       +A   H+  V   G V++ G N      HR   R 
Sbjct: 18  EGPIST---SYRSLAVPSGLRAA--AAGAYHSLLVTTDGLVYSAGKND-----HRQLGRS 67

Query: 90  -PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---T 145
            P    + +EA++    +QV AG +F+  L  RG V+  G+   GQLG G          
Sbjct: 68  GPAGIFKRIEAIEVASIRQVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRV 127

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           PK I  L +V  +V ++ G  + LA++ + +V+++G  +N  LG+G      QP  I   
Sbjct: 128 PKIIRSLHDV-PIVALSVGGRHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPEL 186

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             +G  VV ++AG +H +AL ++  +Y +G    G LG GD   +  PE + +      V
Sbjct: 187 NGRG--VVGLAAGRQHSLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLV 244

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQIST 324
           +V A    +     TG  + +G   +G  G  D   +D +L PR +DS++ H H++ I+T
Sbjct: 245 KVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDD--ADAILLPREIDSVQEHGHIADIAT 302

Query: 325 GLYHTV--VVTD-----------RGRLFGFGDNERAQLG 350
           G  H+V  VVT            +  LF FG N  AQLG
Sbjct: 303 GKRHSVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLG 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQ 160
            +   AG   +  +T  G V++ G N H QLG      R  P    K I  +E V S+ Q
Sbjct: 34  LRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLG------RSGPAGIFKRIEAIE-VASIRQ 86

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGD 219
           +AAG  + L +   G VY+ G+G    LG G Q  E   R  +  R    + +V +S G 
Sbjct: 87  VAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGG 146

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            H +AL +S  V+ WG+   G LG+G  +    P P+  L     V + A ++ +  L  
Sbjct: 147 RHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRGVVGLAAGRQHSLALTA 206

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
              +Y FG    G LG  D   +   LRP ++ +     + ++S G +H++  +  G  F
Sbjct: 207 ASELYAFGANEHGQLGVGD---TKPRLRPELVRAALRKGLVKVSAGDFHSLARSATGHAF 263

Query: 340 GFGDNERAQLG-HDTLRGCLEPTEI 363
            +G N+  Q G  D     L P EI
Sbjct: 264 AWGGNQWGQCGVGDDADAILLPREI 288



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ------CVSFTRINFPSAAHVVQ 54
           Q+  G   +L++ +   V++ G+   G LG G +T++       +  +  + P    +V 
Sbjct: 86  QVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVP----IVA 141

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +S    HA  +  S  VF  G+N++   G+     P ++P  +  L G     + AG   
Sbjct: 142 LSVGGRHALALSASSIVFAWGENANGQLGNGHFV-PSYQPTPIPELNGRGVVGLAAGRQH 200

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  LT    ++  G+N HGQLG GDT  R  P+ +      G +V+++AG  + LA +  
Sbjct: 201 SLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKG-LVKVSAGDFHSLARSAT 259

Query: 175 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           G  +++G       G G+  D  L PR I + +  G H+  ++ G  H V L
Sbjct: 260 GHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEHG-HIADIATGKRHSVLL 310


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 24/358 (6%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVL 66
           H+L++ S+ +V++ GS+  G LG G +  + V    +     + VV V+A S  H+  V+
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL---SGVVAVAAGSGQHSVAVM 365

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVH 125
            +G+V+T G N     G   ++     P+   AL  V    V AG  + G  +   G V 
Sbjct: 366 ANGEVWTWGHNVEGQLGEGSSSYSAV-PKRSHAL--VERTSVAAG-RYHGLASKPDGTVW 421

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
             G N  GQLG G T  R  P  +  L  +   V +AAG    LA+  +G V+++G  +N
Sbjct: 422 AWGDNAKGQLGDGTTAQRLLPTQVPGLTNM---VAVAAGHHSSLALKADGTVWAWGDNAN 478

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG+G   D   P  +         VV ++AG  H +A+ + G ++TWG    G LG G
Sbjct: 479 GQLGNGSTTDRSNPTQVPGL----TGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDG 534

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
             +D+ +P  +  +     V V A    + V+   G+V+ +G    G LG          
Sbjct: 535 TTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGG-----GTTT 587

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +RP    +     V  I+ GLYH++ +   G ++ +G N   QLG+        PT++
Sbjct: 588 IRPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 160/364 (43%), Gaps = 32/364 (8%)

Query: 7    RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
            R+     S+ +V++ G +  G LG G   T   + +         V  ++A E H   V 
Sbjct: 758  RFTAARKSDGTVWAWGDNTYGQLGDG---TTLATRSPAQVSGLTDVEGLAAGEGHVVVVK 814

Query: 67   QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
              G V+T G+N+    G   T R +  P  V  L GV    V AG   +  L   G V  
Sbjct: 815  MDGTVWTWGNNAKGQLGDGTTTRRLV-PTQVPGLTGVVA--VAAGYAHSLALKADGTVWG 871

Query: 127  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
             G N +GQLG G T  R     +AP +  G   V+ +A+G  + LA   +G ++++G  +
Sbjct: 872  WGENIYGQLGDGTTTQR-----VAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNA 926

Query: 185  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
            +  LG G     L P  + +       VV +SA  +H +AL   G V+ WG    G LG 
Sbjct: 927  HGQLGIGTTTTRLAPTLVPSLS----GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGD 982

Query: 245  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG-VSD 303
            G    + +P    SL S  A  V A    +  +   G+V+        S G  DRG +  
Sbjct: 983  GTTTTRHVPTQAPSLSSVKA--VSAGFEYSLAVKADGTVW--------SWGINDRGQLGS 1032

Query: 304  KVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEP 360
                PR   +  A  + V+ +     H +VV+  G + GFGDNE  QLG  DTL   L P
Sbjct: 1033 GTATPRATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI-RLAP 1091

Query: 361  TEIF 364
             +++
Sbjct: 1092 NQVW 1095



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 173/412 (41%), Gaps = 68/412 (16%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G + +L L ++ +V++ G +  G LG+G  TT   + T++  P    VV ++A  
Sbjct: 452 VAVAAGHHSSLALKADGTVWAWGDNANGQLGNG-STTDRSNPTQV--PGLTGVVSIAAGP 508

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            HA  V   G ++T GDN++   G   T +RPI  P  V  + GV    V AGL  +  +
Sbjct: 509 GHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVVS--VAAGLYHSLVV 564

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            + G V   GSN  GQLG G T  RP P     L     VV I AG  + LA+  +G V+
Sbjct: 565 KVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLT---GVVAITAGLYHSLALKTDGTVW 621

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G   +  LG+G    +  P  +  F       V + AG  H +A+ + G V+TWG  Y
Sbjct: 622 AWGYNLHGQLGNGNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSVWTWGYNY 677

Query: 239 CGALGHGD-----------------------------EIDKTLPEPLSSLKSHL------ 263
            G LG G                                D T     S+ K  L      
Sbjct: 678 RGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSAR 737

Query: 264 ------------AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
                       A  + A  R T      G+V+ +G   +G LG    G +     P  +
Sbjct: 738 WHYAPTLSRLVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLG---DGTTLATRSPAQV 794

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    V  ++ G  H VVV   G ++ +G+N + QLG  T    L PT++
Sbjct: 795 SGLT--DVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQV 844



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 168/414 (40%), Gaps = 74/414 (17%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  GR+HTL + S+ +V++ G +  G LG+G    Q V           ++  V A + H
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL---WNISAVGAGDLH 109

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +  +   G V+T G N+    G   T     P+  P L E ++      V AG + +  L
Sbjct: 110 SLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEVVR------VAAGFSHSLAL 163

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   GSN  G+LG G T  R  P  +  L    ++  IAAG ++ LA+ G G V+
Sbjct: 164 KTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLP---TIKAIAAGNAHSLALDGTGRVW 220

Query: 179 SFGSGSNFCLGHGEQHDELQPRAI------------------------------------ 202
           ++GS SN  LG       + P  +                                    
Sbjct: 221 AWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANTYGQL 280

Query: 203 ---QTFRRKGIHVVRVSAG-------DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
               T  R     V   AG       + H + L S G V+TWG    G LG G +  + +
Sbjct: 281 GDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLV 340

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  +  L   +AV   + +    V+ + G V+ +G    G LG    G S     P+   
Sbjct: 341 PVQVMGLSGVVAVAAGSGQHSVAVMAN-GEVWTWGHNVEGQLG---EGSSSYSAVPK--- 393

Query: 313 SLRAHHV---SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             R+H +   + ++ G YH +     G ++ +GDN + QLG  T    L PT++
Sbjct: 394 --RSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQV 445



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 152/364 (41%), Gaps = 22/364 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + IT G YH+L L ++ +V++ G +L G LG+G  TTQ V       P  +  V + A  
Sbjct: 602 VAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVP---TQVPGFSGGVSLGAGI 658

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G V+T G N     G   T       + V    GV    + AG   +  L 
Sbjct: 659 YHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQ-VAGFTGVSF--LAAGEFHSVALR 715

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G     GSN  GQLG G       P     L  +     +AAG  +  A   +G V++
Sbjct: 716 TDGTAWAWGSNDKGQLGDGSARWHYAPT----LSRLVGARGLAAGDRFTAARKSDGTVWA 771

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG G       P  +         V  ++AG+ HVV +   G V+TWG    
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGL----TDVEGLAAGEGHVVVVKMDGTVWTWGNNAK 827

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    + +P  +  L     V V A    +  L   G+V+G+G   +G LG    
Sbjct: 828 GQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKADGTVWGWGENIYGQLG---D 882

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G + + + P     L    V  +++G YH +     G L+ +G N   QLG  T    L 
Sbjct: 883 GTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLA 940

Query: 360 PTEI 363
           PT +
Sbjct: 941 PTLV 944


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEV 545

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 117
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ GD HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGDHHVAVLTSR 542

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALR 574



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 13/300 (4%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V+T G               +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 187
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 188 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPD 298
               + P+ + SL     V+V      T  +V+     G        F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTW-GDGDKNRLG 453

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 140/344 (40%), Gaps = 34/344 (9%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 54  QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-----EVGSVVQIAAGPS 166
              +   T  G + T G    G LGHG+      PK +  L      +V   +   A   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIV 426

Query: 167 YMLAVTGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            ++  TG  +    ++++G G    LGHG +   L P  + +      H  +++ G    
Sbjct: 427 EVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTFT 484

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTG 281
           VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL    
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRS 543

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V+ +G    G LG  D   ++    P  +++LR  HV  +S G
Sbjct: 544 EVFTWGKGANGRLGHGD---TEDKRTPTCVEALRDRHVKSLSCG 584



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 167
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGDHH 535

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDR--HVKSLSCGSN----FTS 589

Query: 228 SGYVYTWGKG 237
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTL--NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 19/284 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            FG    G LG+   P++     V R   +D L    VSQI  G
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCG 295



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 19/282 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           V+T+G    G LG+    +K  P+ +  +   ++   C R R
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGRLR 298


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 155/359 (43%), Gaps = 22/359 (6%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            Q   G  H+  + S+ S+++ G +  G LG           ++   P+    V VSA   
Sbjct: 712  QADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYG 771

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  +   G +++ GDNS    G   T N P  RP  VEA  G+   Q +AG +    L+
Sbjct: 772  FSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALS 831

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G+++T G N+ GQLG   T + P  K   A      +   ++AG  + +AV   G VY
Sbjct: 832  SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVY 891

Query: 179  SFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++G  ++  LG         +P    T    GI   + SAG+ H VA+   G +YTWG  
Sbjct: 892  TWGDNTHGELGRSTTSTPADKPGKADT--PAGITFTQASAGESHSVAVSDDGSIYTWGDT 949

Query: 238  YCGALGHGDEI---DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
              G LG    I   DK  P    +       Q  A  + +  L   GS+Y +G  G  S 
Sbjct: 950  ANGRLGRDTNITPADK--PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSA 1007

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            G           RP  +D+      +Q S G  + + +   G L+ +GDN + QLG DT
Sbjct: 1008 G-----------RPNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDT 1055



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 16/328 (4%)

Query: 31   HGPETT-QCVSFTRINFPSAAHVVQVSASEN---HAAFVLQSGQVFTCGDNSSFCCGHRD 86
            +GPE+  Q V+ T    P  A  +++S ++    H+A V   G ++T GDNS    G   
Sbjct: 689  NGPESGGQTVTLT----PPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT 744

Query: 87   TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
             ++P   P   EA  GV    V+AG  F+  L   G +++ G N+ GQLG   T + P  
Sbjct: 745  ADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPAN 804

Query: 147  KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +        G + VQ +AG S+++A++ +G +Y++G  S   LG     +    +  +  
Sbjct: 805  RPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKAD 864

Query: 206  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSH 262
                +    VSAG  H VA+D+ G VYTWG    G LG        DK  P    +    
Sbjct: 865  TPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADK--PGKADTPAGI 922

Query: 263  LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
               Q  A +  +  + D GS+Y +G    G LG  D  ++    +P   D+      +Q 
Sbjct: 923  TFTQASAGESHSVAVSDDGSIYTWGDTANGRLGR-DTNIT-PADKPGKADTPAGVTFTQA 980

Query: 323  STGLYHTVVVTDRGRLFGFGDNERAQLG 350
            S G  H++ +   G L+ +GD+ +   G
Sbjct: 981  SAGGKHSIALGSDGSLYTWGDSGKTSAG 1008



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 24/329 (7%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRL 96
           +N P+  H  QVS    H   +   G +++ G+N+    G        +D  +   +P+L
Sbjct: 212 VNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKL 271

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEE 154
           V    GV   Q  AG   +  L   G++++ G N +G+LG   G  +    P  +   + 
Sbjct: 272 VTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKG 331

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIH 211
           +  + QI+AG  Y +A+  +G +YS+G  +   LG    G    +  PR + T       
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKM-TMPAGVKK 390

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG------DEIDKTLPEPLSSLKSHLAV 265
              + AG+   +A  S G +Y+WG    G LG        D   + +  P    K     
Sbjct: 391 FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTK---FT 447

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQIST 324
           +V A  R +  L   G++Y +G      LG  D G +   ++P ++         +++S 
Sbjct: 448 KVSAEHRHSLALGSDGNLYSWGLNDCKQLGR-DTGSAKYDVKPGKVPTPAGVAQFTEVSA 506

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G  H++ +   G L+ +G N+  +LG  T
Sbjct: 507 GYSHSLAIGSDGNLYSWGQNKYGELGRPT 535



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 42/349 (12%)

Query: 33  PETTQCVSFTRINF-PSAAHVVQ----VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 87
           P + +   +TRI   P     ++    V A E  +  +   G ++  GDN+       D 
Sbjct: 146 PTSGKATEYTRITLTPPTTPDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDE 205

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPT 145
            R    P LV    GV   QV+ G  +T FL I   G++++ G+N  G+LG       P 
Sbjct: 206 KR---TPSLVNPPTGVHFTQVSTG--YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPK 260

Query: 146 --------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHD 195
                   PK + P   V    Q  AG  + LA+  +G +YS+G      LG   G    
Sbjct: 261 DNPQIDNQPKLVTPPAGV-HFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIY 319

Query: 196 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKG-------YCGALGHGDE 247
           +++P  +     KGI  + ++SAG  + +ALDS G +Y+WG         Y G     D 
Sbjct: 320 DVKPGKVNL--PKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDR 377

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDK 304
             + +  P    K      + A +  +      GS+Y +GW  +G LG    P R   D+
Sbjct: 378 SPRKMTMPAGVKK---FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPAR--QDR 432

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
             R ++         +++S    H++ +   G L+ +G N+  QLG DT
Sbjct: 433 TPR-KVTMPAGVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDT 480



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 15/254 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSA-AHVVQVSAS 58
           Q   G++H+L + S+ +++S G +  G LG         V   ++N P     + Q+SA 
Sbjct: 282 QACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAG 341

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 115
             ++  +   G +++ GDN+    G      P FR   PR +    GV          +T
Sbjct: 342 TFYSMALDSDGDLYSWGDNTYDELGRYAGGYP-FRDRSPRKMTMPAGVKKFTWIKAGEWT 400

Query: 116 GFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
              T   G +++ G N +GQLG      R   TP+ +     V    +++A   + LA+ 
Sbjct: 401 SLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALG 460

Query: 173 GNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 229
            +G +YS+G      LG   G    +++P  + T    G+     VSAG  H +A+ S G
Sbjct: 461 SDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVAQFTEVSAGYSHSLAIGSDG 518

Query: 230 YVYTWGKGYCGALG 243
            +Y+WG+   G LG
Sbjct: 519 NLYSWGQNKYGELG 532



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           V A++  +  +   G++Y +G   +  LG P+    D+   P +++     H +Q+STG 
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNY-KLGTPE----DEKRTPSLVNPPTGVHFTQVSTGY 227

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTL 354
            H + +   G L+ +G+N   +LG +T+
Sbjct: 228 THFLAIGSDGNLYSWGNNADGELGRETV 255


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 2   QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 57
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 58  SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 93
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 94  PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 152 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 311
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 51
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 52  ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 99
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 272
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 273 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 362 EI 363
            +
Sbjct: 598 AV 599



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 3   ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 62  AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 152
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 153 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 200
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 261 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 309 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 350 GHDTLRGCLEPT 361
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 173
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 174 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 204
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 205 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 317
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 37  QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 93
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 206
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
             + K+K  V                       GV      P I        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVI--------VTCCSAGA 261

Query: 327 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 363
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 97  VEALKGVPC---KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           ++A K V C     + +G + +  +T +G  +  G+  +G+LG G T +  TP      +
Sbjct: 682 MQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPK 741

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IH 211
            V  +  +AAG  + LA++ +G ++ +G   + C       + + PR       +G    
Sbjct: 742 GV-RLRSVAAGACHSLALSMDGDLWFWGRREDTC----STTNYMSPRIFMQLEGQGGVPK 796

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCA 269
           V  +SA + H +A+  +G V+ WG       G G    + L  PE ++ L S     V  
Sbjct: 797 VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVAT 855

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLG 295
             + +F ++ +G V+  G +  G LG
Sbjct: 856 GPQGSFFILASGEVFAAGVIKSGRLG 881



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 212 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 267
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 268 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 303
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 304 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 361 TEIFI 365
             +++
Sbjct: 225 VRVYL 229


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 147/298 (49%), Gaps = 16/298 (5%)

Query: 49  AAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           A  + +V+    H+  V +SG++ TCG  DN     G+ +        +  E++      
Sbjct: 103 AKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIA----- 157

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAG 164
            V AG   T   + +G ++  GSN HGQLGH DT  +    P+ I  L +   + Q+A G
Sbjct: 158 DVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDA-PIKQVACG 216

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             + +A+T +G VY++G G++  LGHG   DE  P+ ++     G ++  + AG E+  A
Sbjct: 217 SYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALV--GENISSIHAGFEYSSA 274

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           + +SG V+ WG G+   LG GD+ D+  P  L    S    Q+         +  +G ++
Sbjct: 275 VSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTS--IRQLAFGSFHAAAVSHSGMLF 332

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            +G    G LG   +   + +L P +LD+  +  +  Q++ G  HT+VVT  G +F F
Sbjct: 333 TWGHATHGPLGHGLKS-PNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 15/291 (5%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  H+++++ S  + +CG +  G LG G        F  +       +  V+A   
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLG-NLENASEFEEVK--GTESIADVAAGFW 164

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H     + G+++  G N     GH DT  +    P+ +  L+  P KQV  G   +  LT
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVY 178
             G V+T G   HG+LGHG T D   PK +  L  VG ++  I AG  Y  AV+ +G V+
Sbjct: 225 KDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEAL--VGENISSIHAGFEYSSAVSTSGKVF 282

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G  + LG G++ D+L P  +         + +++ G  H  A+  SG ++TWG   
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAPVVLDF----PTSIRQLAFGSFHAAAVSHSGMLFTWGHAT 338

Query: 239 CGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            G LGHG +    + EP    +  +   + QV    + T V+  TG V+ F
Sbjct: 339 HGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 27/289 (9%)

Query: 87  TNRPIFR-----PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           T+ PIF      P  VE   L     K+V  G   +  +T  G + TCG N +GQLG G+
Sbjct: 81  TDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGN 140

Query: 140 TLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
                  ++ +  EEV    S+  +AAG  + LA +  G +Y++GS  +  LGH +   +
Sbjct: 141 L------ENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVK 194

Query: 197 L--QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           L  +P+ I   R   I   +V+ G  H +AL   G VYTWG G  G LGHG   D+ +P+
Sbjct: 195 LAVEPQEILLLRDAPIK--QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPK 252

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + +L       + A    +  +  +G V+ +G+  F  LG  D+      L P +LD  
Sbjct: 253 RVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK---KDQLAPVVLDFP 309

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPT 361
            +  + Q++ G +H   V+  G LF +G      LGH   +    LEPT
Sbjct: 310 TS--IRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPT 356



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 15/219 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G YH++ L  +  V++ G    G LGHG    + +   R+      ++  + A   
Sbjct: 212 QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP-KRVEALVGENISSIHAGFE 270

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFL 118
           +++ V  SG+VF  G    +  G  D      + +L   +   P   +Q+  G      +
Sbjct: 271 YSSAVSTSGKVFVWGYGHFYVLGQGDK-----KDQLAPVVLDFPTSIRQLAFGSFHAAAV 325

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  G + T G  THG LGHG  L  P     P  +    ++ +  Q+A G  + L VTG 
Sbjct: 326 SHSGMLFTWGHATHGPLGHG--LKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGT 383

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           G V+SFG G    LG G   D  +P+ I  F  K +  V
Sbjct: 384 GDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQV 422



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 218 GDEHVVALDSSGYVYTWGK---GYCGALGHGD----EIDKTLPEPLSS--LKSHLAVQVC 268
           G E  V L  +  +++WG    G  G+ GH D    E+ +  PE +    L + L  +V 
Sbjct: 51  GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVA 110

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                + ++ ++G +   G    G LG  +   + +    +  +S     ++ ++ G +H
Sbjct: 111 CGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTES-----IADVAAGFWH 165

Query: 329 TVVVTDRGRLFGFGDNERAQLG-HDT-LRGCLEPTEIFI 365
           T+  + +G+L+ +G N+  QLG HDT ++  +EP EI +
Sbjct: 166 TLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILL 204


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 154/356 (43%), Gaps = 21/356 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HT+ L  + ++++ G++  G LG G   T  V FT +       V  ++A   +     Q
Sbjct: 332 HTVALRQDGTLWAWGNNSSGQLGDG---TTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQ 388

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G V+  GDN     G   T R +  P  V+ L GV    + AG  +T      G V   
Sbjct: 389 DGTVWAWGDNEWGQLGDGTTTRRL-TPVQVQGLTGVTA--IAAGYLYTVASKQDGTVWAW 445

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G N   QLG G    R TP  +  LE    +  IAA     +AV  +G V+++G  +   
Sbjct: 446 GDNKRSQLGEGAVSQRHTPGEVQGLE---GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G     L P  +Q        V  V+A D H+VA+   G V+ WG G+ G LG G  
Sbjct: 503 LGDGTTTRRLTPVQVQGL----AGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTG 558

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
           +D++ P  +  L    A  + A    T  L   G+V+ +G+  +G LG    G +   L 
Sbjct: 559 MDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLG---DGTTAGHLT 613

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           P  +  +       I+ G  HTV +   G ++ +G N   QLG  T      P ++
Sbjct: 614 PVQVPGVTG--AVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQV 667



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 159/356 (44%), Gaps = 23/356 (6%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HTL +  + +V++ G++  G LG G  T +   F+ +   + A    ++A   H     Q
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRR---FSPVQVMTGA--TAIAAGIYHTVAASQ 138

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G V+T G NSS   G   T+   F P  V+ L GV    V AG N +  L   G V T 
Sbjct: 139 DGTVWTWGRNSSGQLGD-GTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G N  GQLG G +  R TP  +  L     V+ I+A  S  +A+  +G V+++G+ S+  
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT---GVIAISANDSETVALRQDGTVWAWGNNSSGQ 252

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G       P  +Q     G  V  ++AG    VAL   G ++ WG    G LG+G  
Sbjct: 253 LGDGTTTVRFTP--VQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTT 308

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
                PE +  L    A  + A    T  L   G+++ +G    G LG    G +     
Sbjct: 309 FGSYRPEQVQGLTGVTA--IAASGIHTVALRQDGTLWAWGNNSSGQLG---DGTTTVRFT 363

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           P  +  L    V+ I+ G  +TV     G ++ +GDNE  QLG  T    L P ++
Sbjct: 364 PVQVQGLTG--VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQV 417



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 162/365 (44%), Gaps = 25/365 (6%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +  G YH      + ++++ G +  G LG GP  +Q ++  ++       V  ++A  +H
Sbjct: 980  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP-LSQSLTPVQVQVQGLTGVAAIAAGFSH 1038

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
               V Q G V++ G N+    G   T + +  P  V+ L GV    ++AG   T  L   
Sbjct: 1039 TLAVRQDGTVWSWGGNAYGQLGDGTTAQSL-TPVQVQGLTGVTA--ISAGDAHTVALRRD 1095

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  + +A+  +G V+++G
Sbjct: 1096 GTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLHTVALRQDGTVWAWG 1152

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              S   LG G       P  +Q        V+ ++AG  H VAL   G V+ WG    G 
Sbjct: 1153 RNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQ 1208

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPD 298
            LG G    +  P  +  L       + A    T  +   G+ + +G+  +G LG   F D
Sbjct: 1209 LGDGTTTRRLTPAQVQGLTG--VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTD 1266

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            R        P  +  L    VS ++ G  HTVVV + G ++ +G+N   QLG+ +     
Sbjct: 1267 RAT------PVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRS 1318

Query: 359  EPTEI 363
             P ++
Sbjct: 1319 TPVQV 1323



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 158/371 (42%), Gaps = 31/371 (8%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            I  G  HTL +  + +V+S G +  G LG G   T   S T +       V  +SA + H
Sbjct: 1032 IAAGFSHTLAVRQDGTVWSWGGNAYGQLGDG---TTAQSLTPVQVQGLTGVTAISAGDAH 1088

Query: 62   AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               + + G V+  G NS    G     HR T      P  V+ L GV    + AG   T 
Sbjct: 1089 TVALRRDGTVWAWGRNSWGQLGDGTTTHRAT------PVQVQGLTGVIA--IAAGSLHTV 1140

Query: 117  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
             L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  + +A+  +G 
Sbjct: 1141 ALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLHTVALRQDGT 1197

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+++G      LG G     L P  +Q        V  ++AG  H  A+   G  +TWG 
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQVQGL----TGVTTIAAGYFHTAAVRQDGTAWTWGF 1253

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               G LG G   D+  P  +  L    A+   A    T V+ + G+V+ +G      LG 
Sbjct: 1254 NLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLG- 1310

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
               G S     P  +++L       ++ G +HTV ++  G  +G+G N   Q+G  T   
Sbjct: 1311 --NGSSTDRSTPVQVEALTGAF--SLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTAD 1366

Query: 357  CLEPTEIFIQE 367
               P  + +QE
Sbjct: 1367 RPTPVNVMVQE 1377



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 156/362 (43%), Gaps = 19/362 (5%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +  G YH      + ++++ G +  G LG GP + + +    +       V  ++A   H
Sbjct: 880  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP---VQVQGLMDVTAMAAGGYH 936

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
             A   Q G ++T G NS    G    +  +  P  V+ L  V    + AG          
Sbjct: 937  MAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL-PVQVQGLMSVTA--MAAGGYHMAAAGQD 993

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G + T G N++GQLG G      TP  +  ++ +  V  IAAG S+ LAV  +G V+S+G
Sbjct: 994  GTLWTWGLNSYGQLGGGPLSQSLTPVQV-QVQGLTGVAAIAAGFSHTLAVRQDGTVWSWG 1052

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              +   LG G     L P  +Q        V  +SAGD H VAL   G V+ WG+   G 
Sbjct: 1053 GNAYGQLGDGTTAQSLTPVQVQGL----TGVTAISAGDAHTVALRRDGTVWAWGRNSWGQ 1108

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LG G    +  P  +  L   +A  + A    T  L   G+V+ +G   +G LG    G 
Sbjct: 1109 LGDGTTTHRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLG---DGT 1163

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            +     P  +  L    V  I+ G  HTV +   G ++ +G N+  QLG  T    L P 
Sbjct: 1164 TTHRATPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPA 1221

Query: 362  EI 363
            ++
Sbjct: 1222 QV 1223



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 134/318 (42%), Gaps = 19/318 (5%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           F + A  V  + + NH   V Q G V+  G+N     G   T R  F P  V+ + G   
Sbjct: 69  FAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRR-FSP--VQVMTGATA 125

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
             + AG+  T   +  G V T G N+ GQLG G ++ R +P  +  L     V  +AAG 
Sbjct: 126 --IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT---GVTAVAAGR 180

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           ++  A+   G V+++G      LG G     L P  +Q        V+ +SA D   VAL
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL----TGVIAISANDSETVAL 236

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              G V+ WG    G LG G    +  P  +  L    A  + A       L   G+++ 
Sbjct: 237 RQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTA--IAAGGGFAVALRQDGTLWA 294

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G    G LG    G +    RP  +  L    V+ I+    HTV +   G L+ +G+N 
Sbjct: 295 WGSNSRGQLG---NGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNS 349

Query: 346 RAQLGHDTLRGCLEPTEI 363
             QLG  T      P ++
Sbjct: 350 SGQLGDGTTTVRFTPVQV 367



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 159/409 (38%), Gaps = 64/409 (15%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
           + +V++ G +  G LG G  T +    T +     A V  V+AS+ H   V Q G V+  
Sbjct: 489 DGTVWAWGDNARGQLGDGTTTRR---LTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAW 545

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           G       G   T      P  V+ L GV    + AG N T  L   G V   G N +GQ
Sbjct: 546 GVGFWGQLGD-GTGMDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQ 602

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LG G T    TP  +     V   V IAAG S+ +A+  +G V+++G      LG G   
Sbjct: 603 LGDGTTAGHLTPVQV---PGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT 659

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P  +Q        V+ ++  + H VA+   G V+TWG    G LG G    +  P 
Sbjct: 660 HRHSPVQVQGL----ADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPV 715

Query: 255 PLSSLKSHLAV------QVCARKRKTFV--------------------------LVDT-- 280
            +  L    A+       V  R+ +T                            L+D   
Sbjct: 716 QVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTA 775

Query: 281 --------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
                         G+++ +G   +G LG    G     L P  +  L +   + I+ G 
Sbjct: 776 MAAGGYHMAAAGQDGTLWTWGLNSYGQLG---GGPLSYRLLPVQVQGLTSATATAIAAGD 832

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            HTV V   G ++ +G N   QLG  T    L P ++ +Q + + T +A
Sbjct: 833 SHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMA 881



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 23/376 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT+ L  + +V++ G +  G LG G   T     T +  P     V ++A  +H
Sbjct: 576 IAAGSNHTVALRQDGTVWAWGFNNYGQLGDG---TTAGHLTPVQVPGVTGAVAIAAGGSH 632

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +LQ G V+T G N     G   T      P  V+ L  V    +    N    + +R
Sbjct: 633 TVALLQDGTVWTWGYNIWGQLGDGTTTHR-HSPVQVQGLADV----IAIATNNGHTVAVR 687

Query: 122 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G N+ GQLG G T  R TP  +  L +  +++  +   S  +A+  +  +++
Sbjct: 688 QDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSS---SQTVAMRQDRTLWA 744

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG G     L P  +Q      + V  ++AG  H+ A    G ++TWG    
Sbjct: 745 WGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 800

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    + LP  +  L S  A  + A    T  +   G+V+ +G    G LG    
Sbjct: 801 GQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLG---D 857

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G + + L P  +       V+ ++ G YH       G L+ +G N   QLG   L   L 
Sbjct: 858 GTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL 917

Query: 360 PTEIFIQEMEEDTGLA 375
           P +  +Q + + T +A
Sbjct: 918 PVQ--VQGLMDVTAMA 931



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 163/369 (44%), Gaps = 17/369 (4%)

Query: 1    MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + I T   HT+ +  + +V++ G +  G LG G  TTQ ++  +++  + A  +  S+S+
Sbjct: 674  IAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDG-TTTQRLTPVQVHGLTDATAILTSSSQ 732

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              A  + Q   ++  GDN     G   T R +  P  V+ L  V    + AG        
Sbjct: 733  TVA--MRQDRTLWAWGDNHWGQLGDGTTTRRL-TPVQVQGLMDVTA--MAAGGYHMAAAG 787

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G + T G N++GQLG G    R  P  +  L    +   IAAG S+ +AV  +G V++
Sbjct: 788  QDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA-TATAIAAGDSHTVAVRQDGTVWA 846

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +GS  +  LG G     L P  +Q   +  + V  ++AG  H+ A    G ++TWG    
Sbjct: 847  WGSNFSGQLGDGTTAQSLTPVQVQV--QGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 904

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
            G LG G    + LP  +  L    A  + A           G+++ +G   +G LG    
Sbjct: 905  GQLGGGPLSYRLLPVQVQGLMDVTA--MAAGGYHMAAAGQDGTLWTWGLNSYGQLG---G 959

Query: 300  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            G     L P  +  L +  V+ ++ G YH       G L+ +G N   QLG   L   L 
Sbjct: 960  GPLSYRLLPVQVQGLMS--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLT 1017

Query: 360  PTEIFIQEM 368
            P ++ +Q +
Sbjct: 1018 PVQVQVQGL 1026


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 158/370 (42%), Gaps = 43/370 (11%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L+ + SV+  G    GV    P+        R++    + V Q++A   H   +   G V
Sbjct: 43  LLEDGSVWQWGRVCDGVEWSAPQ--------RVDI---SGVRQIAAGSGHVLALKGDGTV 91

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           +  G NS    G   TN     P  V  L GV  K ++AG  F+  L   G V   GSNT
Sbjct: 92  WAWGSNSYGELGD-GTNENSIEPVQVAGLTGV--KAISAGKGFSLALKGDGSVWAWGSNT 148

Query: 132 HGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           +GQLG      +   TP  +  LE    VV I+ G S+  A+  NGV++++G  S+  LG
Sbjct: 149 YGQLGKNPLSFMGSLTPIQVEGLE---GVVSISCGGSHCFALQENGVLWAWGENSHGILG 205

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGD-- 246
            G    + +P      + K   V    AG+  H +A+   G V+ WG  Y G LG G   
Sbjct: 206 DGTNESQFKP-----VKPKIKDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQLGTGGVS 260

Query: 247 -----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
                      E D   P+ +  +    A  V A    +  L   GSV+ +G    G LG
Sbjct: 261 LSDQGRISLGREADNYNPDIVRGVSD--AKAVAAGGSHSVALASDGSVWAWGSNSDGQLG 318

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G SD V  P  +  +    V+ I+ G+YHT+ +   G ++ +G N   QLG+ +  
Sbjct: 319 LGHAGGSD-VTSPTRVQGIEG--VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFS 375

Query: 356 GCLEPTEIFI 365
               P  I I
Sbjct: 376 AASSPVPILI 385


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 9/225 (4%)

Query: 128 GSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           G    GQLG  D       P P+ +    E+   V++A G S+ LA+TG+G VYSFG G+
Sbjct: 5   GCGEFGQLGLKDAAGVFTSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G LG 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G   +   P P+++L   L  QV      T  +   G ++ +   G G  G    G  D 
Sbjct: 122 GSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSW---GHGHWGQTGHGTQDN 178

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 179 ILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 233 TWGK 236
            WG 
Sbjct: 214 AWGD 217



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 178 YSFG 181
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 231 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           + +WG G  G LG  D        LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 29/336 (8%)

Query: 32  GPETTQCVSFTR--------INFPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSF 80
           G E+T C++  +        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 44  GAESTFCITIHKKVFMWGQGIQIPKQLELQDIEQIAASKEHW-FAWSDTQVFGCGSNKQG 102

Query: 81  CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 135
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSN + QL
Sbjct: 103 KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQL 162

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 163 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAK 222

Query: 196 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            ++ P  I +     + + +++ G  HV+A+D+ G +Y+WG+G  G LGHG   D + P 
Sbjct: 223 CMKLPSPITSL--GNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPN 280

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +SSL S     V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 281 QISSLSS--IRDVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDA---PQMLQI- 334

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              H   I+ G +H+ V+T  G LF FG+NE +QLG
Sbjct: 335 ---HGEMIACGRHHSAVLTKNGALFMFGNNESSQLG 367



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 2   QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQVSASE 59
           QI   + H    S++ VF CGS+  G LG          F   +  S     + +++   
Sbjct: 77  QIAASKEHWFAWSDTQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 136

Query: 60  NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 137 DHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 196

Query: 117 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVT 172
            +   G + + GSN  G+LG       +  P+P  S+  L+    + ++A G  ++LA+ 
Sbjct: 197 AIDEEGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLK----IAKLALGTFHVLAID 252

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             G +YS+G G    LGHG  +D  +P  I +       +  V+ G+ H +AL ++G VY
Sbjct: 253 TQGNLYSWGRGLQGQLGHGTSNDCSKPNQISSLSS----IRDVACGEAHSMALQNNGSVY 308

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            +G G  G LG GD   +  P+    L+ H  +  C R     VL   G+++ FG
Sbjct: 309 VFGSGQFGQLGLGDYKQQDAPQ---MLQIHGEMIACGRHHSA-VLTKNGALFMFG 359



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 16/225 (7%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           PK +    E+  + QIAA   +  A +   V   FG GSN     G  +    P     F
Sbjct: 67  PKQL----ELQDIEQIAASKEHWFAWSDTQV---FGCGSNKQGKLGMNNSVNTPTLFDIF 119

Query: 206 R---RKGIHVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSS 258
               + G  + +++ G +H VAL   +    ++ WG      LG    E    +P  L S
Sbjct: 120 SEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDS 179

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
                 V + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    
Sbjct: 180 DNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNLK 237

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +++++ G +H + +  +G L+ +G   + QLGH T   C +P +I
Sbjct: 238 IAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQI 282


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 29/356 (8%)

Query: 18  VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAH---VVQVSASENHAAFVLQS 68
           VF C     G LG  P++     Q +   R+ +  P+  +   V  +++ E H  F+   
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 129 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILASDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           + H        P  ++ F    I +V++SAG+   +AL +SG ++ WGK   G LG    
Sbjct: 183 IRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTN 233

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            D   P  + ++ S +AV+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 KDVVNPCAVPNINSVVAVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMR 291

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRVI 344



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 131/312 (41%), Gaps = 59/312 (18%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I +G  HTL +S+   V+SCGS+  G LG G       +   ++  S   ++Q+SA  +H
Sbjct: 52  IASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSH 111

Query: 62  AAFVLQSGQVFTCGDNS------------------------------------------- 78
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 138
            F  G +   R    P  VE    +P  Q++AG  FT  LT  G +   G N  GQLG  
Sbjct: 172 VFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDF 231

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
              D   P ++     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNKDVVNPCAVP---NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 199 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 254 EPLSSLKSHLAV 265
             + S+++  +V
Sbjct: 342 RVIDSVENVASV 353



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 29/256 (11%)

Query: 121 RGHVHTCGSNTHGQLG------HGDTLDRPTPKSI--APLEEVGSVVQ-IAAGPSYMLAV 171
           R  ++  G    GQLG        D      P+ +  AP  + G +V+ IA+G  + L +
Sbjct: 3   RRQLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFL 62

Query: 172 TGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +G V+S GS  N  LG G   E    + P  I +     + ++++SAG  H +A+   
Sbjct: 63  SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS----TVSIIQISAGRSHSMAVSDD 118

Query: 229 GYVYTWGKGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G ++ WG    G L   GD +    P+ + SL     VQV      T  L   G V+ +G
Sbjct: 119 GRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWG 176

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
               G +      V   +  P          + QIS G   T+ +T  G LF +G NE  
Sbjct: 177 QQSDGRIRHSPAEVEIFISIP----------IVQISAGNLFTMALTASGTLFAWGKNEEG 226

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG  T +  + P  +
Sbjct: 227 QLGDFTNKDVVNPCAV 242



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 5/159 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI+ G   T+ ++ S ++F+ G +  G LG   + T          P+   VV V   +
Sbjct: 199 VQISAGNLFTMALTASGTLFAWGKNEEGQLG---DFTNKDVVNPCAVPNINSVVAVECGD 255

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G+VF+CG +S    G    NR     R +  + G    ++  G   T  + 
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHT-IVV 314

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
             G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 315 ANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 32/380 (8%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 56
           ++  G YHT  L+S+  V+  G    G +G         ++   N P  A     V+ + 
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGD-------AAWNARNTPVQARGLNDVMDIH 90

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
                   +   G V+T G N +   G   T      P  V  L G+  K ++ GL +  
Sbjct: 91  TGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNV-PTPVSGLSGI--KAISGGLGYHS 147

Query: 117 F-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  G V T G N +G+LG+G T+ + +P  +  L +V     IAAG  Y LA+  +G
Sbjct: 148 MALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDV---TAIAAGGYYSLALKSDG 204

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            ++++G+  N  LG G   D+  P  +         V+ ++AG  H +A+   G V+ WG
Sbjct: 205 TIWAWGANGNGELGDGTIVDKHTPVQVSGLS----DVIAITAGGSHSLAIKQDGTVWAWG 260

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G   ++T+P  + +L+ H+   +      +  L   G+V+G+G    G LG
Sbjct: 261 INMYGTLGDGTRTNRTIPVKVRNLQ-HIKA-IAGGGHHSLALDQEGNVWGWGDNSRGQLG 318

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G +     P  L  +   HV  I+ G +H+  +   GR++G+G N   Q+G  T  
Sbjct: 319 L---GHNSSRTTPEQLTGI--EHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRN 373

Query: 356 GCLEP--TEIFIQEMEEDTG 373
               P  T+  +     DTG
Sbjct: 374 DRNAPALTKAVLDTTAPDTG 393



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 15/296 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M I TG   T+ L S+ +V++ GS+  G LG G    + V  T ++  S    +      
Sbjct: 87  MDIHTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVP-TPVSGLSGIKAISGGLGY 145

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + ++G V+T G N +   G+  T +    P LV  L  V    + AG  ++  L 
Sbjct: 146 -HSMALTENGTVWTWGKNDNGELGNGTTVQQ-NSPVLVIGLSDVTA--IAAGGYYSLALK 201

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   G+N +G+LG G  +D+ TP  ++ L +V   + I AG S+ LA+  +G V++
Sbjct: 202 SDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDV---IAITAGGSHSLAIKQDGTVWA 258

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG G + +   P  ++  +    H+  ++ G  H +ALD  G V+ WG    
Sbjct: 259 WGINMYGTLGDGTRTNRTIPVKVRNLQ----HIKAIAGGGHHSLALDQEGNVWGWGDNSR 314

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G LG G    +T PE L+ ++  L   +      +  L   G V+G+G    G +G
Sbjct: 315 GQLGLGHNSSRTTPEQLTGIEHVL--DIAGGGFHSAALKKDGRVWGWGLNSSGQIG 368


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 17/316 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           VV+++  + H+A V +SG+++  G N       GH    + + +P  V+ LK    ++V 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHT---KSLNKPSFVKPLKPEKVRKVA 96

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G N T   +  G + + G N  GQLGH D  +   PK I  + ++  + QIA G  + +
Sbjct: 97  CGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQM-EIKQIACGTYHSI 155

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
            ++ +G VY +G+ +   LG GE+ +   P+ ++ F+++   VV VS G  H   +   G
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLK-FKKE---VVSVSCGYYHTALVTRDG 211

Query: 230 YVYTWGKGYCGALGHGDE--IDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           ++YT+G+   G LG       + T+P+ ++    +   + V    R T  +   G  Y +
Sbjct: 212 FLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAW 271

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG   + +  +V  P+ +  L       +S G  HT VVT+ G++F FGD   
Sbjct: 272 GDGSQGQLGHGTKLL--EVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRH 329

Query: 347 AQLGH--DTLRGCLEP 360
            +LG   D+     +P
Sbjct: 330 GKLGQGEDSFSNSFDP 345



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 6/258 (2%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++  G   +  +T  G ++  GSN  GQLG G T     P  + PL+    V ++A G +
Sbjct: 42  EMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK-PEKVRKVACGRN 100

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + +  + +G ++SFG   +  LGH ++ +EL P+ I++  +  + + +++ G  H + L 
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQ--MEIKQIACGTYHSIILS 158

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G VY WG    G LG G+E++ +LP+ L   K  ++V  C       V  D G +Y F
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVS-CGYYHTALVTRD-GFLYTF 216

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG     +S+  +   +           +S G  HTV +T +G  + +GD  +
Sbjct: 217 GENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276

Query: 347 AQLGHDT-LRGCLEPTEI 363
            QLGH T L    EP +I
Sbjct: 277 GQLGHGTKLLEVNEPKQI 294



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 164/363 (45%), Gaps = 19/363 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSAS 58
           +++  G  H+ +++ S  ++  GS+  G LG G  ++    SF +   P    V +V+  
Sbjct: 41  VEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--VRKVACG 98

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            NH     +SG++F+ G N     GH D    +  P+ +E++  +  KQ+  G   +  L
Sbjct: 99  RNHTIVYSESGKLFSFGCNEDGQLGHVDKENELL-PKEIESIPQMEIKQIACGTYHSIIL 157

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +  G V+  G+N  GQLG G+ ++   PK +   +E   VV ++ G  +   VT +G +Y
Sbjct: 158 SEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTALVTRDGFLY 214

Query: 179 SFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +FG        L   +  +   P+++          + VS G  H VA+   G+ Y WG 
Sbjct: 215 TFGENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAWGD 273

Query: 237 GYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G  G LGHG + ++   P+ +  L     + V   +  T V+ ++G V+ FG    G LG
Sbjct: 274 GSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLG 333

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             +   S+    P  L      +V  +S G  HT+V+        F D      G ++LR
Sbjct: 334 QGEDSFSN-SFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVD------GENSLR 386

Query: 356 GCL 358
             +
Sbjct: 387 ASM 389



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
           F  K   VV ++ GDEH   +  SG +Y +G    G LG G       P  +  LK    
Sbjct: 33  FWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKV 92

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
            +V   +  T V  ++G ++ FG    G LG  D+   +  L P+ ++S+    + QI+ 
Sbjct: 93  RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDK---ENELLPKEIESIPQMEIKQIAC 149

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLG 350
           G YH++++++ G ++ +G+N   QLG
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG 175



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
           +K+   V++      + V+ ++G +Y FG   +G LG    G +  + +P  +  L+   
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL---GHTKSLNKPSFVKPLKPEK 91

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 369
           V +++ G  HT+V ++ G+LF FG NE  QLGH      L P EI  I +ME
Sbjct: 92  VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQME 143


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 43/351 (12%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFR-PRLV 97
           F   +  ++VSA   H A V    +++T  +           C G    NR ++R P+ V
Sbjct: 479 FTGGSTAIEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHG----NRAMYRTPKRV 534

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLE 153
           +   G+P KQ   G +FT  LT  G V++CGS+ +G LG    +G  +   TP  I  L 
Sbjct: 535 DFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNV--LTPIKIDALS 592

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++  VV IA G  +++A+T  G VY++G+G +  LG G Q+D   P+ + T   K  ++V
Sbjct: 593 KL-KVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLV-TLPEKYNYIV 650

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI------DK----------TLPEPLS 257
           +++ G ++   L S+G++  +G   C  L     I      DK          TLP P+ 
Sbjct: 651 KITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVR 710

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RA 316
            L+S+  V + + K  + V+ + G +  FG   FG LG  D    +    P ++  L   
Sbjct: 711 PLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRN---FPSLVSGLLNG 767

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIF 364
             V+  + G   TVV T   ++F +G  E  +LG +   G   C  P  IF
Sbjct: 768 KEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIF 818



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 28/335 (8%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ + G L HG          R++F +   + Q    E+    + +SG V++CG +   C
Sbjct: 513 GTEIVGQLCHGNRAMYRTP-KRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGC 571

Query: 82  CGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G        +  P  ++AL  +    +  G      LT  G V+T G+  HG+LG G+ 
Sbjct: 572 LGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQ 631

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL---------GHG 191
            D   P+ +   E+   +V+I  G      +T NG + +FG+     L         G+ 
Sbjct: 632 NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNT 691

Query: 192 EQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           ++    Q       P  ++  R     +V +++G  H   +D  G + T+G    G LG 
Sbjct: 692 DKSSTQQKVSYVTLPTPVRPLR--SYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGL 749

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           GD   +  P  +S L +   V +C      F +V T     F W G G  G     +S+ 
Sbjct: 750 GDYQSRNFPSLVSGLLNGKEVTIC-NCGDNFTVVATADNQIFSW-GCGENGRLGLNLSNG 807

Query: 305 VLR---PR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
           + +   P+ I  SL  H V  ++   + T+++ +R
Sbjct: 808 ITKCCSPKPIFGSL--HKVVSMAARSWSTIILAER 840



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 36/305 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q   G   T++++ S  V+SCGS   G LG  G   +  ++  +I+  S   VV ++  +
Sbjct: 544 QAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIACGD 603

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNF 114
            H   +   G V+T G+      G  + N     P+LV     +P K     ++T G + 
Sbjct: 604 CHVVALTNIGSVYTWGNGEHGRLGLGNQN-DFNLPQLV----TLPEKYNYIVKITCGRDN 658

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTL------DRPT----------PKSIAPLEEVGSV 158
           T  LT  GH+   G+N   +L    T+      D+ +          P  + PL     +
Sbjct: 659 TFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSY-RI 717

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           V +A+G S+   V   G + +FGS +   LG G+      P  +      G  V   + G
Sbjct: 718 VSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLN-GKEVTICNCG 776

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTL-PEPL-SSLKSHLAVQVCARKRKT 274
           D   V   +   +++WG G  G LG    + I K   P+P+  SL  H  V + AR   T
Sbjct: 777 DNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIFGSL--HKVVSMAARSWST 834

Query: 275 FVLVD 279
            +L +
Sbjct: 835 IILAE 839


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  114 bits (285), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 17/233 (7%)

Query: 119 TIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           T RG + T GS+++ +LG    G    + TP+ + P   +  +  I+ G  Y  A+T NG
Sbjct: 586 TQRG-IMTWGSSSNCKLGFKTEGREQSQATPERL-PNFNIPEICSISCGSYYSAALTENG 643

Query: 176 VVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            VY +G GS        LG+G   D+L P  +++       VV VS G  H  AL S+G 
Sbjct: 644 DVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSE----VVLVSIGYYHSAALKSNGE 699

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + TWG G  G LGHGD +++T+P+ + ++ SH   QV   ++ T  L   G V+ +G   
Sbjct: 700 LLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSE 759

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           +G LG  D   + K   P ++ SL  +++ QI+ G  H  V+T+   +  FG+
Sbjct: 760 YGQLGLGD---TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGN 809



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 95/362 (26%), Positives = 160/362 (44%), Gaps = 38/362 (10%)

Query: 5   TGRYHTLLISNSSVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + R  T L +   + + GSS    LG    G E +Q       NF +   +  +S    +
Sbjct: 577 SSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNF-NIPEICSISCGSYY 635

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-----------FRPRLVEALKGVPCKQVTA 110
           +A + ++G V+  G  S         N P+             P  VE+L  V    V+ 
Sbjct: 636 SAALTENGDVYMWGRGSV-------KNPPLSTLGNGSLEDQLLPTKVESLSEVVL--VSI 686

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  L   G + T G    GQLGHGD L++  PK +  +     V Q+  G  + + 
Sbjct: 687 GYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTS-HWVTQVQCGEKHTIC 745

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T NG V+++G+     LG G+      P  + +  +   ++++++ G  H   L ++  
Sbjct: 746 LTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEK--YNIIQIACGSTHCAVLTNARE 803

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWM 289
           V  +G G   A+G  + I  ++P  + +LK HL ++ +      T  L + G VY   W 
Sbjct: 804 VLVFGNG--AAMGSANII--SVPMMVPALK-HLNIERLSCGHYSTAALTECGDVYT--WG 856

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
               LG    G +   L P+++D LR+  + QIS G  H   +TD G+++  G +   QL
Sbjct: 857 SGQELG---HGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQL 913

Query: 350 GH 351
           GH
Sbjct: 914 GH 915



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     +++Q++    
Sbjct: 735 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-EKYNIIQIACGST 793

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +  + +V   G+ ++       +   I  P +V ALK +  ++++ G   T  LT 
Sbjct: 794 HCAVLTNAREVLVFGNGAAM-----GSANIISVPMMVPALKHLNIERLSCGHYSTAALTE 848

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+T GS    +LGHG       PK +  L    S+ QI+ G  +M  +T +G +Y+ 
Sbjct: 849 CGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRS-QSIRQISCGGRHMAFLTDSGKIYTC 905

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           G      LGH  Q D+ +P+ I +  +     + VS G+ H  +L
Sbjct: 906 GKDPFGQLGHA-QGDQNKPKKIDSLLKTTF--ISVSCGENHNASL 947


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 33/344 (9%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPET---TQCVSF--TRINFPSAAHVVQV 55
            +  G  H+L L S  +V + G++  GVLG+G +T    Q  S+    ++ P+   V  V
Sbjct: 102 DVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSV 161

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +AS  ++  +  +G V   G+N     G+  TN   + P  +          + A  N  
Sbjct: 162 AASSTYSLALTATGTVLAWGNNDQGQLGN-GTNTDSYLPVPLALPAATTITAIAAATNHG 220

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  G V   GSN  GQLG+G+T +  TP ++A L    ++  IAA  S+ +A+T  G
Sbjct: 221 LALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVA-LPAGTTITAIAAAGSHSMALTSTG 279

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V ++G             D + P  I      GI +  V++G++H +AL S+G V+TWG
Sbjct: 280 TVLTWG------------QDTVLP--IPIVFPAGITITAVASGNDHSLALTSTGKVFTWG 325

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             Y G+LG+G   + ++P P S         +     ++  L  TG +  +G   +G +G
Sbjct: 326 ANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVG 385

Query: 296 -------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
                  +P  GVS  V      D+     ++ ++ G YH++ V
Sbjct: 386 NGTRTGSWPGMGVSVPVPVSLAADT----KITTMAGGYYHSLAV 425



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 30/340 (8%)

Query: 27  GVLGHGPET-TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH- 84
           G LG G  T    +S  R++ P+   +  V+A   H+  +  +G V   G N     G+ 
Sbjct: 74  GALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNG 133

Query: 85  ----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
                      + P  V    G     V A   ++  LT  G V   G+N  GQLG+G  
Sbjct: 134 TKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTN 193

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
            D   P  +A L    ++  IAA  ++ LA+T NG V ++GS  +  LG+G   +   P 
Sbjct: 194 TDSYLPVPLA-LPAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTP- 251

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            +      G  +  ++A   H +AL S+G V TWG+            D  LP P+    
Sbjct: 252 -VTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQ------------DTVLPIPIVFPA 298

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH 317
                 V +    +  L  TG V+ +G   FGSLG   F +  V      P   D+    
Sbjct: 299 GITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPT--DT---- 352

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
            ++ I+ G   ++ +T  G+L  +G N   Q+G+ T  G 
Sbjct: 353 TITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRTGS 392



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 22/289 (7%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIA 150
             P  V    G     V AG   +  LT  G V   G+N +G LG+G   D      S  
Sbjct: 87  LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYV 146

Query: 151 P----LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           P    L    +V  +AA  +Y LA+T  G V ++G+     LG+G   D   P  +    
Sbjct: 147 PAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLP--VPLAL 204

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
                +  ++A   H +AL S+G V  WG    G LG+G+  +   P  ++         
Sbjct: 205 PAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITA 264

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           + A    +  L  TG+V  +G               D VL P  +       ++ +++G 
Sbjct: 265 IAAAGSHSMALTSTGTVLTWG--------------QDTVL-PIPIVFPAGITITAVASGN 309

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            H++ +T  G++F +G N    LG+ T      P    +      T +A
Sbjct: 310 DHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPTDTTITAIA 358



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 89/231 (38%), Gaps = 13/231 (5%)

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
           PL  +      A  PS   A TG G+ +         +G     D+L P  ++     G 
Sbjct: 43  PLPTLAQHAAAATPPSG--AATGIGLAWGRDGYGALGVGTATLDDKLSP--VRVHLPTGT 98

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT------LPEPLSSLKSHLA 264
            +  V+AG  H +AL S+G V  WG  Y G LG+G + D +      +P  +        
Sbjct: 99  TISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTV 158

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
             V A    +  L  TG+V  +G    G LG    G +     P  L    A  ++ I+ 
Sbjct: 159 TSVAASSTYSLALTATGTVLAWGNNDQGQLG---NGTNTDSYLPVPLALPAATTITAIAA 215

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
              H + +T  G +  +G N   QLG+        P  + +      T +A
Sbjct: 216 ATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIA 266


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 12/353 (3%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G++  G LG G E          +  S   + +V     H+ F++  G V+TCG NS   
Sbjct: 5   GNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS--- 61

Query: 82  CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT- 140
           CG    ++    P +V AL       V+ G   +  +  +G +   G+   GQLG G T 
Sbjct: 62  CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 199
                P+ +  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TTVRIPRLVKRLCD-HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
             +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D+ D+ +P  +  L
Sbjct: 181 HPLKSL--AGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFL 238

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
           +S   V +      T  L   G ++ FG   +G LG    G ++  L PR +  L    V
Sbjct: 239 RSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLG---HGSTNSELLPRRVLELMGTEV 295

Query: 320 SQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
           SQI+ G +HT+  V   G ++ FG N   QLG   L     P  +      ED
Sbjct: 296 SQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSED 348



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 20/298 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASEN 60
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS    
Sbjct: 42  GQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITM--------VSCGRG 93

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  V + GQ+F  G       G   T   +  PRLV+ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR 153

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 178
            G + T G NT GQLG G     P+     PL+ +  +   QI AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL   G ++T+G G 
Sbjct: 212 GWGKNRAGQLGLNDKQDRAVPCHIKFLRSQ--KVVYISCGDEHTAALTKDGGLFTFGDGS 269

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 295
            G LGHG    + LP  +  L      Q+   +  T   V  +G VY FG    G LG
Sbjct: 270 WGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLG 327


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  114 bits (285), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 9/277 (3%)

Query: 92  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           F+P +V+    +   +V+ G +FT  L+  GHV++ G    G LG G+     TP +I  
Sbjct: 241 FKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTP-NIIK 299

Query: 152 LEEVGSVVQ----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
            ++ G + Q    IA G +++L++   G+VYS+G+G    LGHG++  E  P+ I   R+
Sbjct: 300 YQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQ 359

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
             I  + + AG+    A+     ++ WG G  G LG G   +   P  L  LK      +
Sbjct: 360 YKI--LMIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDI 417

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                 +  ++  G    +G    G LG  +  +     +P+ L +L    + QI+ G +
Sbjct: 418 ALGSNHSLCILRNGKAMCWGSSKDGKLGL-ETALDRNFTQPKELVTLDKEKLYQIAAGPF 476

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 363
           H++ +T+ G ++ FG+++  +LG+D ++G ++ P +I
Sbjct: 477 HSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKI 513



 Score =  107 bits (268), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 124/233 (53%), Gaps = 11/233 (4%)

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
           P   SI   +    +++++ G S+ LA++  G VYS+G G++  LG GEQ+  + P  I+
Sbjct: 240 PFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIK 299

Query: 204 TFRRKGIHVVR----VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
            +++ G H+ +    ++ G  HV++LD  G VY+WG G  G LGHGDE  + +P+ +  L
Sbjct: 300 -YQKNG-HLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGL 357

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
           + +  + + A +  +  +     ++ +G    G LG    G +  VL+P +L+ L+   V
Sbjct: 358 RQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLG---TGKTANVLKPVMLEDLKDQKV 414

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL--RGCLEPTEIFIQEMEE 370
             I+ G  H++ +   G+   +G ++  +LG +T   R   +P E+   + E+
Sbjct: 415 EDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEK 467



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 19/265 (7%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR--INFPSAAHVVQ--- 54
           ++++ G   TL +S    V+S G    G LG G    Q VS T   I +    H+ Q   
Sbjct: 255 IKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQG---EQNVSMTPNIIKYQKNGHLFQNIK 311

Query: 55  -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGL 112
            ++   NH   +   G V++ G+      GH D T   I  P+ +  L+      + AG 
Sbjct: 312 DIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENI--PKEIIGLRQYKILMIEAGE 369

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             +  ++I+  +   G   HG+LG G T +   P  +  L++   V  IA G ++ L + 
Sbjct: 370 GSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKD-QKVEDIALGSNHSLCIL 428

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            NG    +GS  +  LG     D    QP+ + T  ++ ++  +++AG  H +AL  +G 
Sbjct: 429 RNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLY--QIAAGPFHSIALTENGE 486

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEP 255
           +Y++G    G LG+ DEI   +  P
Sbjct: 487 IYSFGNSKDGKLGY-DEIKGNVQIP 510



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 40/278 (14%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H L + +   V+S G+   G LGHG ET + +    I       ++ + A E  
Sbjct: 313 IACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGL-RQYKILMIEAGEGS 371

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +A +    ++F  G       G   T   + +P ++E LK    + +  G N +  +   
Sbjct: 372 SAAISIKNELFIWGVGLHGRLGTGKTAN-VLKPVMLEDLKDQKVEDIALGSNHSLCILRN 430

Query: 122 GHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           G     GS+  G+LG    LDR    PK +  L++   + QIAAGP + +A+T NG +YS
Sbjct: 431 GKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDK-EKLYQIAAGPFHSIALTENGEIYS 489

Query: 180 FGSGSNFCLGHGEQHDELQ-PRAIQT---FRRK--------------------------- 208
           FG+  +  LG+ E    +Q PR I     F RK                           
Sbjct: 490 FGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQ 549

Query: 209 ---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              G  V++   G    V L + G +Y  G    G LG
Sbjct: 550 QLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLG 587



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 48/276 (17%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           +  VS    H   V   G  F  G  DN     G +DT   + +P  +++L+        
Sbjct: 677 IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDT--VVSKPTRIKSLQDKVIIMTA 734

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG--------DTLDRP----------------- 144
           +G + + FL+  G V   G N  G+LG G        D  + P                 
Sbjct: 735 SGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKI 794

Query: 145 --TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG------VVYSFGSGSNFCLGHGEQHDE 196
             TPK I  LE +G    IAAG ++ +A+           ++++G G +   GHG   ++
Sbjct: 795 ELTPKIIKGLESIGF---IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
             P+ ++    K    ++ S G +H +ALD++G++  W  GY  ++G  D  D+    P 
Sbjct: 852 YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHI--WFFGYKPSVGIEDFNDEKQFMP- 908

Query: 257 SSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFG 287
           + L++   +Q     + + +     +  +G VYGFG
Sbjct: 909 ARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFG 944



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 46/282 (16%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAA 163
           K V+ G      +T  G     G N +GQLG G  DT+    P  I  L++   ++  A+
Sbjct: 678 KHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTV-VSKPTRIKSLQD-KVIIMTAS 735

Query: 164 GPSYMLAVTGNGVVY--------SFGSGSNFCLGHGEQHD-------------------E 196
           G S+ L ++  G V           G G N   G  ++ +                   E
Sbjct: 736 GESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIE 795

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL------DSSGYVYTWGKGYCGALGHGDEIDK 250
           L P+ I+     G     ++AG  H +A+      + +  ++TWG G+ G  GHG   + 
Sbjct: 796 LTPKIIKGLESIGF----IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 251 TLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            LP+   +  LK    +Q     + T  L  TG ++ FG+    S+G  D     + +  
Sbjct: 852 YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKP--SVGIEDFNDEKQFMPA 909

Query: 309 RILDSLRAHHVSQ-ISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           R+    +     + IS+G  H + VT  G ++GFG N   ++
Sbjct: 910 RLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTKI 951



 Score = 41.2 bits (95), Expect = 0.85,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 28/203 (13%)

Query: 55   VSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCK 106
            ++A +NH+  +       ++ ++FT G       GH       + P++V+   LK     
Sbjct: 810  IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND-YLPQIVKVPVLKDTKFI 868

Query: 107  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ----- 160
            Q + G   T  L   GH+   G      +G  D  D    K   P   E  S +Q     
Sbjct: 869  QASCGSKHTIALDTTGHIWFFGYKP--SVGIEDFNDE---KQFMPARLETPSKIQEPFKF 923

Query: 161  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
            I++G  + LAVT +G+VY FG  +N  + +    + L    ++   +     V  + G  
Sbjct: 924  ISSGEEHNLAVTQSGLVYGFGKNTNTKI-NSSHKEYLYFDQVENEEK----AVLTACGAN 978

Query: 221  HVVALDSSGYVYTW---GKGYCG 240
            H V +D+ G  YTW   G G CG
Sbjct: 979  HSVLIDTKGVPYTWGFVGNGRCG 1001


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTL--NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 161/370 (43%), Gaps = 34/370 (9%)

Query: 12  LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           +++ +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH+   +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 182 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 236
                            P  I+      R +G+  VR ++ G  H +AL+  G +  WG 
Sbjct: 176 Q-------------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGN 222

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG GD    + P P+  L     V + A    +  L D G VYG+G    G LG 
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 282

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 357 CLEPTEIFIQ 366
             +P E+ I+
Sbjct: 342 TGQPLELPIK 351



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 18/303 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFT 115
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE---NVRLIAVGAFHNLALEEDG 215

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            + ++G+     LG G+      P  +Q      + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 236 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 294 LGF 296
           LG+
Sbjct: 334 LGY 336


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 9/244 (3%)

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 179
            G V+  G N +G LG GD      PK I  L +   +VQ+A G   ++LAVT +G +YS
Sbjct: 40  NGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQ-KDIVQLAYGMGPHVLAVTDSGELYS 98

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGH     E + + +  + +K   V++V+ G  H +AL   G VY WG   C
Sbjct: 99  WGHGGYGQLGH---TSEEKSKPVLVYMQK--KVIQVACGSYHSIALTEDGEVYAWGSNNC 153

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G   ++  P+ +S + S   V V   +  T +L   G +Y +G+ G G LG  + 
Sbjct: 154 GQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENN 213

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
             ++++   R+  SL    + +I  G+ H +V+TD G L+ +G N   QLG  T      
Sbjct: 214 --TNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSV 271

Query: 360 PTEI 363
           PT I
Sbjct: 272 PTLI 275



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN-HAAF 64
           G    L ++N  V++ G +  G LG G + +  +    I       +VQ++     H   
Sbjct: 31  GNEALLTLTNGDVYALGFNGNGCLGVG-DGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLA 89

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V  SG++++ G       GH    +   +P LV   K V   QV  G   +  LT  G V
Sbjct: 90  VTDSGELYSWGHGGYGQLGHTSEEKS--KPVLVYMQKKVI--QVACGSYHSIALTEDGEV 145

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           +  GSN  GQLG G + ++ TPK ++ L     +V ++ G S+ + +T +G +YS+G   
Sbjct: 146 YAWGSNNCGQLGLGISNNQATPKRVS-LIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNG 204

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           N  LG     ++LQP  + T    G  + ++  G  HV+ L   G +Y+WG    G LG 
Sbjct: 205 NGQLGIENNTNQLQPVRV-TGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGL 263

Query: 245 GDEIDKTLPEPLSS 258
           G   + ++P  +++
Sbjct: 264 GTTHNTSVPTLINT 277



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YH++ L  +  V++ GS+ CG LG G    Q     R++   +  +V VS  +
Sbjct: 127 IQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATP-KRVSLIPSKKIVSVSCGQ 185

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +    +   G++++ G N +   G  +    +   R+  +L G   +++  G+     LT
Sbjct: 186 SFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLT 245

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
             G +++ G+N++GQLG G T +   P  I
Sbjct: 246 DIGELYSWGANSYGQLGLGTTHNTSVPTLI 275


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 160/332 (48%), Gaps = 13/332 (3%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           +I  G+  T L+ +N SVF+CG    G LG G    +  S   I       ++Q++ S  
Sbjct: 323 EIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEH-SLVPITELQGYCIIQLATSLG 381

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H   V  SG+VF+ GD      GH ++ R   +P+ + AL+     Q + G   +  
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQASCGFKHSAV 440

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV- 176
           LT  G V T G   +G LG G    + TP+ I  L+    + QIA G  + LA+  NG  
Sbjct: 441 LTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN-EHISQIACGKDHTLALANNGKK 499

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +Y++G G    LG G       P  + ++R   + + +++ G +  + L ++GY+YT+G 
Sbjct: 500 LYAWGDGEFGKLGLGSTSVRSIPNLVDSYR--NVCLKKIACGSKFSIVLATNGYLYTFGH 557

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                +   D +D T+P+ +SSL  H  + +         L ++G+++G+G    G LG 
Sbjct: 558 KDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGI 617

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
              G ++    P+++ +    +++++S G  H
Sbjct: 618 ---GTTNPHYLPQLVCTFSGTNITRLSAGTTH 646



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 16/339 (4%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCG 75
           +V+  GS++ G L  G +   C+   + N  S    V+      +  F+LQ+ G VF CG
Sbjct: 289 TVYVWGSNIHGELP-GLQGKTCL---QPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACG 344

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTH 132
           + +    G   ++       + E L+G    Q+   L   G    +   G V + G   +
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITE-LQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDY 403

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           G+LGHG++  +  PK I  L+    VVQ + G  +   +T +G V++FG G    LG G 
Sbjct: 404 GKLGHGNSERQRKPKQIIALQ-AEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGG 462

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKT 251
              +  P+ I + + +  H+ +++ G +H +AL ++G  +Y WG G  G LG G    ++
Sbjct: 463 NSPQKTPQLILSLKNE--HISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRS 520

Query: 252 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           +P  + S ++    ++    + + VL   G +Y FG   F  LG  +  + D  + P+I+
Sbjct: 521 IPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDF--LGIAETDLLDNTI-PQIV 577

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            SL  H +  I+ G  + + + + G ++G+G NE  QLG
Sbjct: 578 SSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLG 616



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 8/142 (5%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VY WG    G L          P  +S+ K    + VC  +  TF+L   GSV+  G   
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVREI-VCG-QNCTFLLQTNGSVFACGEGT 347

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
           +G LG   +G SD       +  L+ + + Q++T L    HT+ V D G +F +GD +  
Sbjct: 348 YGRLG---QGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYG 404

Query: 348 QLGHDTLRGCLEPTEIFIQEME 369
           +LGH       +P +I   + E
Sbjct: 405 KLGHGNSERQRKPKQIIALQAE 426


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 174/392 (44%), Gaps = 41/392 (10%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSF----TRIN----------FPSAAHVVQVSASE 59
           +N  ++SCG  + G LG   E  +  SF    T+ +          +        +    
Sbjct: 45  TNKYLYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGH 104

Query: 60  NHAAFV-LQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H   V  +  Q+++CG  S       +++TN     P LV  LK    KQV  G   T 
Sbjct: 105 YHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTL 164

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            LT    V + G  +  QLG G T ++P P  I  L ++G+++++  G  + L +T +G 
Sbjct: 165 VLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGD 224

Query: 177 VYSFGSGSNFCLGHGEQHDELQ-PRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++++G   +   GHG   + +  P+ I+T ++ K I       G +  +A+ + G V +W
Sbjct: 225 IFTWGFTQDSQTGHGFSEEPIHIPKMIKTNYKFKNIF-----TGSDFNLAITNDGRVCSW 279

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR------------KTFVLVDTGS 282
           G G  G LGHGD  +   P+ + S++  +   +    R               ++ + G 
Sbjct: 280 GSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGK 339

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +   GW G G LG   +G  D  L P  L+       V ++S G  H+  +T+ G+L+ +
Sbjct: 340 LLTLGWNGNGQLGSGVKG--DNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIW 397

Query: 342 GDNERAQLGH-DTLRGCLEPTEIF-IQEMEED 371
           G+  + +LG+  ++   L P E+  I E   D
Sbjct: 398 GNGNKGKLGNGKSVGDQLTPLELIDIDENNTD 429



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 17/275 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  GR HTL+++    VFS G      LG G    Q +     +     +++++     
Sbjct: 155 QVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWG 214

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G +FT G       GH  +  PI  P++++       K +  G +F   +T 
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLAITN 272

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPK---SIAPL--------EEVGSVVQIAAGPSYML 169
            G V + GS   GQLGHGDT +   PK   SI PL          +     +A G S+ L
Sbjct: 273 DGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHAL 332

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            +  +G + + G   N  LG G + D  L P  ++ F   G  VV+VSAG  H   +  S
Sbjct: 333 IIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLE-FDFDGEKVVKVSAGRNHSACITES 391

Query: 229 GYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSH 262
           G +Y WG G  G LG+G  + D+  P  L  +  +
Sbjct: 392 GKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN 426


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+  E H  F+ +  ++++ G N     G    +   F    V    GV   Q+ AG
Sbjct: 12  VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +   G V   GSN HGQLG  +T+  +  PK I  L EV   VQ+A+G  + +A
Sbjct: 72  RAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV---VQVASGSDHCIA 128

Query: 171 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           +T +G VY +G  ++  C+ H E  + L            I +VRV AG  H VA+ +SG
Sbjct: 129 LTEDGRVYVWGEQADGRCIHHPELVEHLN----------AIPIVRVEAGARHCVAISASG 178

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            V+TWG+   G LG  D   +T    ++ +     V+       T +L   G  + FG  
Sbjct: 179 AVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSD 238

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  RG  + FG N   QL
Sbjct: 239 ALGQCGFGKK--LEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQL 295

Query: 350 GH 351
           G+
Sbjct: 296 GN 297



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 30/343 (8%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT+ ++ +  ++S GS++ G LG G  +    S   ++  S   +VQ++A   H
Sbjct: 15  VACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAGRAH 74

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G+VF  G N     G  +T      P+ +  L  V   QV +G +    LT  
Sbjct: 75  SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV--VQVASGSDHCIALTED 132

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V+  G    G+  H        P+ +  L  +  +V++ AG  + +A++ +G V+++G
Sbjct: 133 GRVYVWGEQADGRCIHH-------PELVEHLNAI-PIVRVEAGARHCVAISASGAVFTWG 184

Query: 182 SGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
             ++  LG     D+ +P+       +  G+ VV  + GD H + L   G  +++G    
Sbjct: 185 QNNSGELG----MDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDAL 240

Query: 240 GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G  G G +++K   P  +S L      ++ A    T  ++  GS Y FG    G LG   
Sbjct: 241 GQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQLG--- 296

Query: 299 RGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
              + K++    PR  D L   HV+ +  G + T  +   G +
Sbjct: 297 ---NGKIMTQSTPRKTDDL--DHVTAVFAGYHQTFFIRSAGSI 334



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 150 APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTF 205
           AP +  G+ V+ +A G  + + +T +  ++S GS  +  LG G++ +    + P ++ + 
Sbjct: 3   APNDADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTS- 61

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLA 264
              G+ +V+++AG  H +A+   G V+ WG    G LG  + I  + +P+ ++ L     
Sbjct: 62  ---GVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNE--V 116

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           VQV +       L + G VY +G    G            +  P +++ L A  + ++  
Sbjct: 117 VQVASGSDHCIALTEDGRVYVWGEQADGRC----------IHHPELVEHLNAIPIVRVEA 166

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           G  H V ++  G +F +G N   +LG D  R
Sbjct: 167 GARHCVAISASGAVFTWGQNNSGELGMDDFR 197


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 149/323 (46%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + +  G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYIACG 315

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++T G   +  G LG+G       PK ++ PLE V  V+ ++ G  + 
Sbjct: 316 EFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGV-QVLSVSCGSWHS 374

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DS 227
              T +G V++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+ +S
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEAL--SGFRTMKVACGLWHSAAIVES 432

Query: 228 SGYV---------YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           S +V         YTWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 433 SNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALS 492

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 493 TSGHVFTMGSSSNGQLGNPK---SDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEV 549

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  +    +PT
Sbjct: 550 YTWGMGANGRLGHGGVEDKKKPT 572



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 137/293 (46%), Gaps = 24/293 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT  ++ S  +++ G      G+LG+G   +  +   R++ P     V+ VS  
Sbjct: 312 IACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLP-KRVSGPLEGVQVLSVSCG 370

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL---- 112
             H+A    SG+VFT GD +    GH  R+T   +  P+ VEAL G    +V  GL    
Sbjct: 371 SWHSALTTSSGKVFTFGDGTFGALGHGKRET---VGYPKEVEALSGFRTMKVACGLWHSA 427

Query: 113 ------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
                 N      I   ++T G+    QLGHGD   R  P  +  L +  S  Q+A G S
Sbjct: 428 AIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY-SFHQVACGHS 486

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
             +A++ +G V++ GS SN  LG+  + D  QP  +Q  R  G  V  +S G  HV  L 
Sbjct: 487 MTIALSTSGHVFTMGSSSNGQLGN-PKSDGKQPIPVQD-RLSGELVEEISCGSCHVAVLT 544

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 278
           S   VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 545 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICI 597



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 233 STNYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 288

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 194
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G G  +   LG+G   
Sbjct: 289 HGTDADISRPKLVEAL-AVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGA 347

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG       P+
Sbjct: 348 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPK 406

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFPDRGVSDK 304
            + +L     ++V      +  +V++ +          +Y +G      LG  D+   D 
Sbjct: 407 EVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDK---DS 463

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            L P  + SL  +   Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 464 RLVPTCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 510



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V+ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 268

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+ WG+   G LGHG + D + P+ + +L       +   +  T  +  +G +
Sbjct: 269 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTASGDL 328

Query: 284 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           Y +G  G+ ++G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 329 YTWG-DGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 387

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
           D     LGH        P E+
Sbjct: 388 DGTFGALGHGKRETVGYPKEV 408


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           ++S +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                    G+      P  +Q      I    ++ G  H +AL+  G +  WG    G 
Sbjct: 176 Q----PWPPGDIKQIFVPVRVQGLENVSI----IAVGAFHNLALEEDGRLLAWGNNEYGQ 227

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG GD    + P P+  L     V + A    +  L D G VYG+G    G LGF D   
Sbjct: 228 LGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK 287

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P 
Sbjct: 288 SSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346

Query: 362 EIFI 365
           E+ I
Sbjct: 347 ELPI 350



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 18/303 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFT 115
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQIFVPVRVQGLE---NVSIIAVGAFHNLALEEDG 215

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            + ++G+     LG G+      P  +       + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVHGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 236 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 294 LGF 296
           LG+
Sbjct: 334 LGY 336


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 257
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTL--NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  114 bits (284), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 14/296 (4%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           I   S   +V VS    H+A V  +G++ T G       GH DT   +  P+++++L   
Sbjct: 683 IKLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQV-EPKVIQSLTSF 741

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
              QV  G   T  LT  G V+T GS+ +GQLG GDT     P  +  LE+  +V+QIA+
Sbjct: 742 WITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKY-NVLQIAS 800

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G ++   +T +  V  FG+G+            L P        K +H+ ++  G     
Sbjct: 801 GSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSL------KYLHIDKLCCGHYSTA 854

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           A+   G VYTWG G    LGHG+   ++ P+ + +L++    Q+    R T  L D+G +
Sbjct: 855 AISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRI 912

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +  G   FG LG    G  +K   P+ ++SL       +S G  + + + D  R F
Sbjct: 913 FTSGKDSFGQLGH-QAGDQNK---PKKIESLTKTTFISVSCGENYNIALFDTTRSF 964



 Score =  100 bits (249), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 63/297 (21%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP----------LEEVGS 157
           +++G  ++  LT  G V+          G G   + P P    P          LE +  
Sbjct: 639 ISSGSYYSAALTENGDVY--------MWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD 690

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           +V ++ G  +  AV  NG + ++G G    LGHG+  ++++P+ IQ+       + +V  
Sbjct: 691 IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSL--TSFWITQVQC 748

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G++H + L  +G VYTWG    G LG GD      P P+++L+ +  +Q+ +      VL
Sbjct: 749 GEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVL 808

Query: 278 VDTGSVYGFG---WMGFGSL-GFPDRGVSDKVLR-------------------------- 307
            ++  V  FG    MG  S+   P    S K L                           
Sbjct: 809 TNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG 868

Query: 308 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                        P+++++LR   + QIS G  HT  +TD GR+F  G +   QLGH
Sbjct: 869 QELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGH 925



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 119 TIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           T RG + T GS ++ +LG         +PTP+ + P   V  +  I++G  Y  A+T NG
Sbjct: 596 TSRG-LMTWGSASNCKLGFKVASKEQSQPTPERL-PNFNVSDICSISSGSYYSAALTENG 653

Query: 176 VVYSFGSGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            VY +G GS        LG  +  D+L P  +++       +V VS G  H  A+ ++G 
Sbjct: 654 DVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESL----TDIVVVSIGFYHSAAVRANGE 709

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 710 LLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSE 769

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           +G LG  D   + +  +P  + +L  ++V QI++G  H  V+T+   +  FG+
Sbjct: 770 YGQLGLGD---TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN 819



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 49/216 (22%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HT+ L  N  V++ GSS  G LG G  T  C     +      +V+Q+++   
Sbjct: 745 QVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP-VTALEKYNVLQIASGST 803

Query: 61  HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 87
           H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 804 HCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVY 863

Query: 88  ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                       N+    P+LVEAL+    +Q++ G   T FLT  G + T G ++ GQL
Sbjct: 864 TWGTGQELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQL 923

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
           GH    D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 924 GH-QAGDQNKPKKIESLTKT-TFISVSCGENYNIAL 957



 Score = 47.8 bits (112), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 13/149 (8%)

Query: 223 VALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           + LD+S  + TWG      LG      E  +  PE L +        + +    +  L +
Sbjct: 592 IHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE 651

Query: 280 TGSVYGFGWMGFGS-----LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            G VY +G     +     LG P   + D++L P  L+SL    +  +S G YH+  V  
Sbjct: 652 NGDVYMWGRGSVKNPPVPVLGIPQ--IEDQLL-PIKLESLT--DIVVVSIGFYHSAAVRA 706

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            G L  +G  E  QLGH   +  +EP  I
Sbjct: 707 NGELLTWGVGEEGQLGHGDTQNQVEPKVI 735


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 163/359 (45%), Gaps = 45/359 (12%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L +S + SV+S GS+  G LG         S T  +  +  H        
Sbjct: 41  VSLAGGEKHSLAVSGDGSVWSWGSNSAGQLG-------VESLTPASVLAPVHA------- 86

Query: 60  NHAAFVLQSGQVF-----TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
                 L SG  F     T GD +   C     +     P L      VP   + AG  F
Sbjct: 87  ------LYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAVP--MLAAGTQF 138

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  L   G V + G NT+  LG GD +DR TP+ +   E + + V +AAG  + LA+T +
Sbjct: 139 SLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV---EALSNAVALAAGDDHTLALTRD 195

Query: 175 GVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           G V+S+G   N  LG G  H+   E  P+ ++       +V  ++A   H  AL   G V
Sbjct: 196 GSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAAQTYHTQALTRDGNV 251

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           ++WG    G LG GD+ D+  P+ + +L + +A+   A    +  +   G V+ +G    
Sbjct: 252 WSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAIN--AGGNHSLAVTRDGQVWAWGENSE 309

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G LG  D    D    P+ +++L   +V  I+ G  HT+ +T  G ++ +G N R Q+G
Sbjct: 310 GQLGLGDLWDRDA---PQKVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIG 363



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 18/239 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L ++ +V+S G +    LG G    +    T     + ++ V ++A ++H   + + G V
Sbjct: 142 LKTDGTVWSWGCNTYATLGLGDRVDR---NTPQKVEALSNAVALAAGDDHTLALTRDGSV 198

Query: 72  FTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           ++ G N +   G    H DT      P+ VEA+  V    + A    T  LT  G+V + 
Sbjct: 199 WSWGWNYNGQLGLGSIHEDTYEST--PKKVEAISNV--TAIAAQTYHTQALTRDGNVWSW 254

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GSN  GQLG GD  DR  P+ +   E + +VV I AG ++ LAVT +G V+++G  S   
Sbjct: 255 GSNDFGQLGMGDQNDRDAPQKV---EALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQ 311

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
           LG G+  D   P+ ++       +VV ++AG +H +AL   G V+ WGK   G +G G+
Sbjct: 312 LGLGDLWDRDAPQKVEALS----NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGE 366



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 42/341 (12%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           ++++ G +  G LG G    Q +    +     ++VV ++  E H+  V   G V++ G 
Sbjct: 8   ALWTWGGNDDGRLGIGATGDQNLP---VQLSYLSNVVSLAGGEKHSLAVSGDGSVWSWGS 64

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           NS+   G            L  A    P   + +G +F  F    G             G
Sbjct: 65  NSAGQLGVE---------SLTPASVLAPVHALYSGDDFHLFYDTDGD------------G 103

Query: 137 HGDTLDR--PTPKSIAP-LEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
            GD  D     P   AP L   G+ V  +AAG  + L +  +G V+S+G  +   LG G+
Sbjct: 104 TGDICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGD 163

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG---DEID 249
           + D   P+ ++       + V ++AGD+H +AL   G V++WG  Y G LG G   ++  
Sbjct: 164 RVDRNTPQKVEALS----NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY 219

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           ++ P+ + ++ +  A+   A+   T  L   G+V+ +G   FG LG  D+   D    P+
Sbjct: 220 ESTPKKVEAISNVTAI--AAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDA---PQ 274

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +++L   +V  I+ G  H++ VT  G+++ +G+N   QLG
Sbjct: 275 KVEALS--NVVAINAGGNHSLAVTRDGQVWAWGENSEGQLG 313



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T  G + T G N  G+LG G T D+  P  ++ L    +VV +A G  + LAV+G+G V
Sbjct: 3   VTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS---NVVSLAGGEKHSLAVSGDGSV 59

Query: 178 YSFGS-------------------------GSNFCL-------GHGEQHDELQPRAIQT- 204
           +S+GS                         G +F L       G G+  D+      +T 
Sbjct: 60  WSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTA 119

Query: 205 --FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
                 G  V  ++AG +  + L + G V++WG      LG GD +D+  P+ + +L + 
Sbjct: 120 PGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSN- 178

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
            AV + A    T  L   GSV+ +GW   G LG            P+ ++++   +V+ I
Sbjct: 179 -AVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS--NVTAI 235

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +   YHT  +T  G ++ +G N+  QLG
Sbjct: 236 AAQTYHTQALTRDGNVWSWGSNDFGQLG 263


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           LT  G V++ G  ++G LG G+T  +  P ++A L     +V I+AG  +  AVT +GV+
Sbjct: 523 LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG-DRIVHISAGSMHSAAVTEDGVL 581

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 235
           Y++G GS   LGHG   D+L P  ++     G+ +V+V   +GD H +ALD +G V++WG
Sbjct: 582 YTWGKGSYGRLGHGNAEDKLIPTIVEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWG 639

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G  G LG        +P+P+S + S    V++    + +  L   G +Y +G      L
Sbjct: 640 DGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQL 699

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G    G  + V +P++++ L    VS +S G  H V +T    ++ +G N
Sbjct: 700 G---HGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKN 746



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 5/271 (1%)

Query: 99   ALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
            A +G+  K++   +G      +T +G ++  G    G+LG G T++   P  I  L+   
Sbjct: 3917 ATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKS-K 3975

Query: 157  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
             V+    G S+   +T +G +Y++G G    LGH +   + +P+ +   + + +  V   
Sbjct: 3976 HVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACG 4035

Query: 217  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            +GD   +   +SG V++WG G  G LG G      +P+ + SL     +++    + +  
Sbjct: 4036 SGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMA 4095

Query: 277  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            L   G VY +G   +  LG  D   S +    R+L  L   +V  I  G  H +V T+ G
Sbjct: 4096 LTTAGHVYTWGKGDYYRLGHGDD--SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESG 4153

Query: 337  RLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            ++F +GDN+  Q+G+DT +    P  I I +
Sbjct: 4154 KVFSWGDNDEGQIGNDTTQAVSVPKRINITD 4184



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 158 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
           ++QI   PS  ++LA+T +G VYS+G GSN  LG G    +  P A+      G  +V +
Sbjct: 508 IIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAAL--SGDRIVHI 565

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR-KRK 273
           SAG  H  A+   G +YTWGKG  G LGHG+  DK +P  +  L     VQV C      
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAH 625

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHTVVV 332
           T  L DTG V+ +G   +G LG P    SD+   P+ +  +     V +I  G   ++ +
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLGRPG---SDQNKVPKPISGIGSTSPVVKIICGNQISMAL 682

Query: 333 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           T  G+L+ +G  +  QLGH       +P  I
Sbjct: 683 TKDGKLYSWGCGDTYQLGHGNQEHVRQPKLI 713



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 28/342 (8%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP--------SAAH 51
            +Q   G   + ++S+   VF+CG    G LG G        F  I  P            
Sbjct: 2961 IQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIG-------GFANIRMPHQISSLSMYVVR 3013

Query: 52   VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
             V VS +  H   V   G+VF+ GD      GH  + +   RP+++E  +    ++V+ G
Sbjct: 3014 KVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH-GSLQSYDRPKMIEIFQAKHIREVSCG 3072

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 170
               +  +++ G + T G    G+LGHGD+ ++  PK +  LE+V  S V   +  ++ LA
Sbjct: 3073 TGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA 3132

Query: 171  VTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
              G+  ++++G GS     L  G    ++ P  + TF     +++++  G    V L   
Sbjct: 3133 A-GDNSLWAWGDGSFGKLGLKDGSSSTDV-PVQVITFPS---NIIQIECGMHFSVLLTKE 3187

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            G VYTWGKG    LG+     + +P  +  L S    QV         L  +G VY +G 
Sbjct: 3188 GKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGD 3247

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
               G  G  +  + ++  +P+I+ SL+ H + +I+ G  H++
Sbjct: 3248 NEHGQQG-NNSTICNR--KPQIVASLKGHRICKIACGSSHSI 3286



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 110/235 (46%), Gaps = 6/235 (2%)

Query: 5   TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           +G +   L  +  V+S G    GVLG G   +Q    T +   S   +V +SA   H+A 
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 122
           V + G ++T G  S    GH +    +  P +VE L GV   QV   +G   T  L   G
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKLI-PTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V + G   +G+LG   +     PK I+ +     VV+I  G    +A+T +G +YS+G 
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           G  + LGHG Q    QP+ I+        V  VS G +H VAL +   VY WGK 
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSE--TVVSDVSVGAQHCVALTTDSDVYAWGKN 746



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 53/336 (15%)

Query: 69   GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
             +VF  G N     G   +   +  P     L  +   Q   G   +  ++  G V  CG
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACG 2983

Query: 129  SNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
              + G+LG G   +   P  I+ L   V   V ++    ++LAVT +G V+S+G G    
Sbjct: 2984 EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043

Query: 188  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
            LGHG      +P+ I+ F+ K  H+  VS G  H  A+  +G ++TWG+G  G LGHGD 
Sbjct: 3044 LGHGSLQSYDRPKMIEIFQAK--HIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDS 3101

Query: 248  IDKTLPEPLSSL-KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----------- 295
             ++T P+ + +L K  ++   C  +    +     S++ +G   FG LG           
Sbjct: 3102 NNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVP 3161

Query: 296  -----FPDR------GVSDKVLR---------------------------PRILDSLRAH 317
                 FP        G+   VL                            P ++D L + 
Sbjct: 3162 VQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASK 3221

Query: 318  HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
             ++Q++ G  H + +T  G ++ +GDNE  Q G+++
Sbjct: 3222 TITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNS 3257



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 5/245 (2%)

Query: 46  FPSAAHVVQV--SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 103
           FP    ++Q+  + S NH   + + G+V++ G  S+   G  +T      P  V AL G 
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQT-APTAVAALSGD 560

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIA 162
               ++AG   +  +T  G ++T G  ++G+LGHG+  D+  P  +  L  V  V V   
Sbjct: 561 RIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCG 620

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           +G ++ LA+   G V+S+G G    LG         P+ I         VV++  G++  
Sbjct: 621 SGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTS-PVVKIICGNQIS 679

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           +AL   G +Y+WG G    LGHG++     P+ +  L   +   V    +    L     
Sbjct: 680 MALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD 739

Query: 283 VYGFG 287
           VY +G
Sbjct: 740 VYAWG 744



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 1   MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--A 57
           + I+ G  H+  ++   V ++ G    G LGHG    + +  T +   +   +VQV   +
Sbjct: 563 VHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIP-TIVEGLNGVKIVQVDCGS 621

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGV-PCKQVTAGLNF 114
            + H   +  +GQV++ GD      G    D N+    P+ +  +    P  ++  G   
Sbjct: 622 GDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNK---VPKPISGIGSTSPVVKIICGNQI 678

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  LT  G +++ G     QLGHG+      PK I  L E   V  ++ G  + +A+T +
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSET-VVSDVSVGAQHCVALTTD 737

Query: 175 GVVYSFGSGSNF 186
             VY++G  S+F
Sbjct: 738 SDVYAWGKNSSF 749



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 8/139 (5%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
            V+ WG      LG  D  +  +  P+ S  L     +Q     + +FV+ D G V+  G 
Sbjct: 2926 VFVWGLNDMRQLG-TDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGE 2984

Query: 289  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNER 346
               G LG    G    +  P  + SL  + V +++      H + VT  G++F +GD + 
Sbjct: 2985 GSSGRLGI---GGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY 3041

Query: 347  AQLGHDTLRGCLEPTEIFI 365
             QLGH +L+    P  I I
Sbjct: 3042 GQLGHGSLQSYDRPKMIEI 3060


>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
 gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 394

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 20/289 (6%)

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-H 123
           +L+ G V + G+N++   G+  T    F P  V AL GV   +V+AGLN    L ++G  
Sbjct: 90  LLKDGTVKSWGNNTTGQLGNGTTTAQPF-PATVAALSGV--SEVSAGLNHA--LAVKGGR 144

Query: 124 VHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           V   G+N   QLG G   D  TP K+  P++ +  V  + AG  + +A+  +G V+++G 
Sbjct: 145 VLAWGNNASKQLGTGQ--DTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGK 202

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G N  LG G       P+ +         V  V+ G EHV+AL + G V  WGKG  G L
Sbjct: 203 GDNGRLGTGNNTTRETPQKVPDL----ADVESVAVGCEHVLALTADGVVKAWGKGAEGQL 258

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G+    D + P  ++ L +     V A     F ++D GSV G+G      LG    G +
Sbjct: 259 GNDSTADSSRPVDVAHLDA--VATVFATSASGFAVLDDGSVAGWGKNAERQLG---DGTN 313

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                P +LD L+   V  I+ G   T+   D G + G+G N  AQLG 
Sbjct: 314 ANRTTPVVLDHLKG--VQSIAGGADFTLAALDDGSVIGWGANAAAQLGD 360



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 102/249 (40%), Gaps = 21/249 (8%)

Query: 2   QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +++ G  H L +    V + G++    LG G +TT       I   S   V  V A  + 
Sbjct: 129 EVSAGLNHALAVKGGRVLAWGNNASKQLGTGQDTTTPYK-APIPVQSLDKVKDVGAGCDF 187

Query: 62  AAFVLQSGQVFTC--GDNSSFCCGHRDTNR-PIFRPRL--VEALKGVPCKQVTAGLNFTG 116
           +  + Q G V+T   GDN     G+  T   P   P L  VE++  V C+ V A      
Sbjct: 188 SVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLADVESVA-VGCEHVLA------ 240

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            LT  G V   G    GQLG+  T D   P  +A L+ V +V   +A      AV  +G 
Sbjct: 241 -LTADGVVKAWGKGAEGQLGNDSTADSSRPVDVAHLDAVATVFATSA---SGFAVLDDGS 296

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V  +G  +   LG G   +   P  +     KG+  +   A D  + ALD  G V  WG 
Sbjct: 297 VAGWGKNAERQLGDGTNANRTTPVVLDHL--KGVQSIAGGA-DFTLAALD-DGSVIGWGA 352

Query: 237 GYCGALGHG 245
                LG G
Sbjct: 353 NAAAQLGDG 361



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 23/250 (9%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-------EVGSVVQIAAGPSYMLAVTGNGV 176
           V   G N  GQLG+G TL + TP ++A +          G     AA   + +A+  +G 
Sbjct: 36  VRAWGENAQGQLGNGSTLAQQTPAAVAGITRDDVRELSGGGGGAAAAANGFAVALLKDGT 95

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V S+G+ +   LG+G    +  P  +         V  VSAG  H +A+   G V  WG 
Sbjct: 96  VKSWGNNTTGQLGNGTTTAQPFPATVAALS----GVSEVSAGLNHALAV-KGGRVLAWGN 150

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                LG G +       P+          V A    +  L   G+V+ +G    G LG 
Sbjct: 151 NASKQLGTGQDTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGKGDNGRLGT 210

Query: 297 PD---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            +   R    KV  P + D      V  ++ G  H + +T  G +  +G     QLG+D+
Sbjct: 211 GNNTTRETPQKV--PDLAD------VESVAVGCEHVLALTADGVVKAWGKGAEGQLGNDS 262

Query: 354 LRGCLEPTEI 363
                 P ++
Sbjct: 263 TADSSRPVDV 272


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 170/354 (48%), Gaps = 21/354 (5%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           ++F+ G +  G LG G  TTQ  S T +     + +V+ +    H+  +   G V+T G 
Sbjct: 470 TLFAWGHNTNGELGDG-TTTQRTSPTAV---VVSGIVKTAGGSAHSVALGAGGAVWTWGY 525

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N+    G+  T + +   +L   + GV    V AG+N T  L+  G V   G N +GQLG
Sbjct: 526 NAYGQLGNGTTTQVVTPTQL-PGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           +G T ++ TP+S+  L+    V  I+AG ++ +A+  +G V+++GS     LG G     
Sbjct: 583 NGTTANQLTPQSVPELD---GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHR 639

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
             P  + +      +VV ++AG  H VA+   G ++ WG G  G LG G   ++++P  +
Sbjct: 640 SSPVQVPSLE----NVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQV 695

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
           S L    AV + A    T  L+  G V+ +G+   G LG  D  +  +   P ++  L  
Sbjct: 696 SGLGH--AVAIAAGGYHTVALLANGQVWTWGYNSSGQLG--DATIIQR-YSPVLVPGLT- 749

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            +V  ++ G Y T V+   G ++ FG N   QLG  T      PT   +  + +
Sbjct: 750 -NVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVD 802



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 168/379 (44%), Gaps = 30/379 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G YHTL + S  S+++ G++  G LG+G + TQ  + TR+       VV  SA   H
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNG-QRTQRNAPTRVR--GLNQVVSASAGAEH 206

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V + G V+T G N+    G   TN     P  V  +  V    V A  + T  L   
Sbjct: 207 SVAVTEDGSVWTWGSNAYGQLGD-GTNTLRAVPVQVPGMSDVVA--VAAAGSRTVALKAD 263

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V T G N+ G+LG G T     P  +  L     V  IAAG  + LAV  +G  +S+G
Sbjct: 264 GTVWTWGINSSGELGDGTTTHSLLPIQVPNLS---GVTNIAAGLWHTLAVKKDGSAWSWG 320

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 240
           + +   LG G   + L+P  +      G+  VR +S G  H VAL   G  + WG    G
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLV-----AGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAG 375

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG+G   + ++P  +++L    AV++ A    T      G++Y +G   +G+LG  +  
Sbjct: 376 QLGNGTTTNSSIPVQVAALTQ--AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNT- 432

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR------LFGFGDNERAQLGHDTL 354
            S  V     L  +R         G Y++V    +        LF +G N   +LG  T 
Sbjct: 433 TSSSVPVQVPLSGVR-----WFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTT 487

Query: 355 RGCLEPTEIFIQEMEEDTG 373
                PT + +  + +  G
Sbjct: 488 TQRTSPTAVVVSGIVKTAG 506



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 27/357 (7%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  + G  H++ ++ + SV++ GS+  G LG G  T + V    +  P  + VV V+A+ 
Sbjct: 198 VSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVP---VQVPGMSDVVAVAAAG 254

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +    +   G V+T G NSS   G   T   +  P  V  L GV    + AGL  T  + 
Sbjct: 255 SRTVALKADGTVWTWGINSSGELGDGTTTHSLL-PIQVPNLSGV--TNIAAGLWHTLAVK 311

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G   + G+N +GQLG G TL+R  P  +A L     V  ++ G  + +A+  +G  + 
Sbjct: 312 KDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLT---GVRALSGGVVHTVALKWDGTAWG 368

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S   LG+G   +   P  +    +     V + AG  H +A    G +Y WG  + 
Sbjct: 369 WGYNSAGQLGNGTTTNSSIPVQVAALTQA----VEIDAGGYHTLARRQDGTLYAWGDNFY 424

Query: 240 GALGHGDEIDKTLP--EPLSSLKSHLA---VQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           GALG G+    ++P   PLS ++   A     V  RK+     V T  ++ +G    G L
Sbjct: 425 GALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHT--LFAWGHNTNGEL 482

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G    G + +   P    ++    + + + G  H+V +   G ++ +G N   QLG+
Sbjct: 483 G---DGTTTQRTSPT---AVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGN 533



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 162/403 (40%), Gaps = 68/403 (16%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L ++ +V++ G +  G LG G   T   S   I  P+ + V  ++A   H   V + G  
Sbjct: 260 LKADGTVWTWGINSSGELGDG---TTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGSA 316

Query: 72  FTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           ++ G+N+    G   T NR   RP LV  L GV  + ++ G+  T  L   G     G N
Sbjct: 317 WSWGNNAYGQLGDGTTLNR--LRPVLVAGLTGV--RALSGGVVHTVALKWDGTAWGWGYN 372

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
           + GQLG+G T +   P  +A L +    V+I AG  + LA   +G +Y++G      LG 
Sbjct: 373 SAGQLGNGTTTNSSIPVQVAALTQA---VEIDAGGYHTLARRQDGTLYAWGDNFYGALGT 429

Query: 191 GEQHDELQP-----RAIQTF---------RRKGIH------------------------- 211
           G       P       ++ F          RK ++                         
Sbjct: 430 GNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQ 489

Query: 212 -----------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
                      +V+ + G  H VAL + G V+TWG    G LG+G       P  L  + 
Sbjct: 490 RTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS 549

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
               + V A    T  L   G+V  +G+  +G LG    G +   L P+ +  L    V+
Sbjct: 550 G--VIDVAAGVNHTVALSADGTVAAWGYNAYGQLG---NGTTANQLTPQSVPELDG--VT 602

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            IS G  HTV +   G ++ +G N   QLG  T      P ++
Sbjct: 603 AISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQV 645



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 16/271 (5%)

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
           C  V+ G+  T  +   G +   G+N  GQLG+G    R  P  +  L +   VV  +AG
Sbjct: 147 CPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ---VVSASAG 203

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             + +AVT +G V+++GS +   LG G       P  +         VV V+A     VA
Sbjct: 204 AEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS----DVVAVAAAGSRTVA 259

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           L + G V+TWG    G LG G      LP  + +L       + A    T  +   GS +
Sbjct: 260 LKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAW 317

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G   +G LG    G +   LRP ++  L    V  +S G+ HTV +   G  +G+G N
Sbjct: 318 SWGNNAYGQLG---DGTTLNRLRPVLVAGLTG--VRALSGGVVHTVALKWDGTAWGWGYN 372

Query: 345 ERAQLGHDTLRGCLEPTEI--FIQEMEEDTG 373
              QLG+ T      P ++    Q +E D G
Sbjct: 373 SAGQLGNGTTTNSSIPVQVAALTQAVEIDAG 403



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 161/374 (43%), Gaps = 41/374 (10%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HT+ +  + + +  G +  G LG+G  T   +    +   +    V++ A   H
Sbjct: 350 LSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIP---VQVAALTQAVEIDAGGYH 406

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
                Q G ++  GDN     G  +T     P+  P     L GV  +   AG  ++   
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-----LSGV--RWFGAGYYYSVAE 459

Query: 119 TIR---GHVHT---CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
             +     VHT    G NT+G+LG G T  R +P ++     V  +V+ A G ++ +A+ 
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVV----VSGIVKTAGGSAHSVALG 515

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
             G V+++G  +   LG+G     + P  +         V+ V+AG  H VAL + G V 
Sbjct: 516 AGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS----GVIDVAAGVNHTVALSADGTVA 571

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG    G LG+G   ++  P+ +  L    A+   A    T  L   G+V+ +G   +G
Sbjct: 572 AWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYG 629

Query: 293 SLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            LG   F  R  S  V  P +       +V  I+ G +HTV V   G L+ +G   + QL
Sbjct: 630 QLGDGTFTHR--SSPVQVPSL------ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQL 681

Query: 350 GHDTLRGCLEPTEI 363
           G  T      P ++
Sbjct: 682 GLGTTTNQSVPVQV 695



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 17/259 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  HT+ L ++ +V++ GS+L G LG G  T +    + +  PS  +VV ++A   H
Sbjct: 604 ISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRS---SPVQVPSLENVVSIAAGHFH 660

Query: 62  AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
              V   G ++  G       G    TN+ +  P  V  L       + AG   T  L  
Sbjct: 661 TVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV--PVQVSGLG--HAVAIAAGGYHTVALLA 716

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V T G N+ GQLG    + R +P  +  L    +V+ +AAG      +  +G V++F
Sbjct: 717 NGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT---NVIALAAGGYTTAVLKRDGTVWAF 773

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G       P A  T       VV +S+G  H++ L    +V   G    G
Sbjct: 774 GYNPNGQLGDGTTTSRSSPTA--TLMNS---VVDLSSGVNHMMGLRKDAWVRACGYNSAG 828

Query: 241 ALGHGDEIDKTLPEPLSSL 259
            LG G    +  P  +++L
Sbjct: 829 QLGDGTTTQRPTPVQVTNL 847



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G YHT+ L++N  V++ G +  G LG   + T    ++ +  P   +V+ ++A  
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATIIQRYSPVLVPGLTNVIALAAGG 758

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              A + + G V+  G N +   G    T+R      L+ ++       +++G+N    L
Sbjct: 759 YTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV-----DLSSGVNHMMGL 813

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
                V  CG N+ GQLG G T  RPTP  +  L   GS+V
Sbjct: 814 RKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLPGDGSIV 854


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 5/248 (2%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           Q  +G      L     VH CG N+ GQLG         P+ I  L  +  V  ++ G  
Sbjct: 33  QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNL-PVDLVSCGKE 91

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LAV   G V+++G GS+  LG G+  +    P+ I+     GI ++++S G  H +AL
Sbjct: 92  HSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL--TGIKIIQISCGYYHSLAL 149

Query: 226 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
              G V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 150 SKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSF 209

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T   ++F FGDN
Sbjct: 210 GWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDN 269

Query: 345 ERAQLGHD 352
              QLGH+
Sbjct: 270 SFGQLGHN 277



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 14/297 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           ++Q ++ E HA  +L +  V  CGDNS    G R       +P  ++AL  +P   V+ G
Sbjct: 31  LLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGK-QPEPIQALVNLPVDLVSCG 89

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 170
              +  +  +G V   G  + GQLG G   +    P+ I  L  +  ++QI+ G  + LA
Sbjct: 90  KEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGI-KIIQISCGYYHSLA 148

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           ++ +G V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 149 LSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLSG 206

Query: 230 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             + WG    G L   G+   +    P  + +LK+   V +      T VL     V+ F
Sbjct: 207 TSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTF 266

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 342
           G   FG LG    GVS +   P++++ +    VSQI  G YHT+  V   G++  FG
Sbjct: 267 GDNSFGQLG--HNGVS-QTTGPQLVEGI-GGPVSQIDCGSYHTLAYVYTTGQVVSFG 319



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHV 52
           +Q  +G  H LL+ +N  V +CG +  G LG         PE  Q +    +N P    V
Sbjct: 32  LQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQAL----VNLP----V 83

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G        F P+ ++AL G+   Q++ G 
Sbjct: 84  DLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGY 143

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+  G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 144 YHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 202

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           + +G  + +G+ S   L   G+       +PR++   +  G  VV +S G EH   L  +
Sbjct: 203 SLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYEHTAVLTQN 260

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
             V+T+G    G LGH      T P+ +  +   ++   C        +  TG V  FG
Sbjct: 261 DQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG 319


>gi|327259202|ref|XP_003214427.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Anolis
           carolinensis]
          Length = 965

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +KG    +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 352 PQKLDVIKGGCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 411

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR +  F
Sbjct: 412 HVEKLQG-KAIHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVF 470

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VYTWG G  G LG   E D  LP+ +   K+   V
Sbjct: 471 LNNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQKASNIV 528

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  TG V   G   F  LG      G+ +      I           L 
Sbjct: 529 SVQCGSDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLS 588

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 589 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 623



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
           G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+   
Sbjct: 361 GCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 420

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
             QV      T  + D G  + FG   +G +G  ++    +VL PR L+    + V Q+S
Sbjct: 421 IHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGV-NKAFGSEVLEPRQLNVFLNNPVEQVS 479

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 480 CGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQK 523



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 125/307 (40%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ I++    F+ GS   G +G +    ++ +   ++N      V QVS  +
Sbjct: 423 QVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVFLNNPVEQVSCGD 482

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH A + ++ +V+T G      CG       D+    + P+ VE  K      V  G + 
Sbjct: 483 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHWLPQKVEIQKASNIVSVQCGSDG 536

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 162
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 537 TFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLSFYKIRTIA 596

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDE 220
            G ++  A+   G + +FGS     LG G     L    I        G  V+RVS GDE
Sbjct: 597 PGKTHTAAIDERGRLLTFGSNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSCGDE 653

Query: 221 HVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL-SSLKSHLAVQVCARKR 272
             +A     +++ WG G  G L        H  +I  + P P+  SL  H    +  R  
Sbjct: 654 FTIAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPIFGSL--HYVPDLSCRGW 711

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 712 HTIIIVE 718


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 21/362 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L+  S+ +V++ G+++ G  G G   T   S   +   + +    V+A + H
Sbjct: 337 VAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT---STAPVQVTALSGGFTVAAGKAH 393

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           A  V   G V+  G N     G   T      P  V  L G     V AG + +  L + 
Sbjct: 394 ALAVRSDGTVWAWGQNLFGQLGD-GTRMQRTAPVQVTGLSG--GVAVAAGDDHSLGLCLD 450

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G NT GQLG G T  RP P  +    E+  VV +AAG S+ LAV+ +G V+++G
Sbjct: 451 GTVWAWGQNTSGQLGDGTTAQRPAPVQV---TELSGVVAVAAGTSHSLAVSSDGTVWAWG 507

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           S ++  LG G     L P  +Q     G  VV V+AG  H +A+ S G V+ WG      
Sbjct: 508 SNASGQLGDGTTRARLTP--VQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQ 563

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G    +  P  +  L   +A    A    + VL   G+V+G+G   +G LG    G 
Sbjct: 564 LGDGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLG---NGT 618

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           ++    P  +  L       ++ G + ++ V   G +  +GDN   QLG  T+   L P 
Sbjct: 619 ANASFSPVQVTGLSGGVA--VAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPV 676

Query: 362 EI 363
            +
Sbjct: 677 GV 678



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 21/364 (5%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G  H+L +  + +V++ G +  G LG G    +      +     + VV V+A  
Sbjct: 185 VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAP---VQVAGLSGVVAVAAGS 241

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  V   G V+  G NS    G   T+  +  P  V  L G     V AG+  +  + 
Sbjct: 242 SHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL-TPVQVTGLSG--GVAVAAGMFHSLAVR 298

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G NT GQLG G      TP     L E  +V   AAG ++ L    +G V++
Sbjct: 299 SDGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWA 355

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+      G G       P  +            V+AG  H +A+ S G V+ WG+   
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG----FTVAAGKAHALAVRSDGTVWAWGQNLF 411

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G  + +T P  ++ L   +A  V A    +  L   G+V+ +G    G LG    
Sbjct: 412 GQLGDGTRMQRTAPVQVTGLSGGVA--VAAGDDHSLGLCLDGTVWAWGQNTSGQLGD--- 466

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                  RP  +       V  ++ G  H++ V+  G ++ +G N   QLG  T R  L 
Sbjct: 467 --GTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLT 524

Query: 360 PTEI 363
           P ++
Sbjct: 525 PVQV 528



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 21/363 (5%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  H+L I  + +V++ GS+  G LG G  + + V    +    A   V V+A  +
Sbjct: 36  RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDA---VLVAAGSS 92

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G  +  G N S   G   T R   RP  V  L     + V AG   +  +  
Sbjct: 93  HSLAIRSDGTAWAWGHNGSGELGDGTTFRRT-RPVQVTGLS--EAEAVAAGDGHSLVVRS 149

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N+ GQLG G T +R  P  +A L      V++AAG  + LAV  +G V+++
Sbjct: 150 DGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLS---GGVKVAAGDGHSLAVCLDGTVWAW 206

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   +  LG G       P  +Q     G  VV V+AG  H +A+ S G V+ WG+   G
Sbjct: 207 GRNDSGQLGDGTTVQRSAP--VQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDG 262

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    +  P  ++ L   +A  V A    +  +   G+V+ +G    G LG    G
Sbjct: 263 QLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLG---DG 317

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
                L P  + ++       ++ G  H++V    G ++ +G+N   Q G  + +    P
Sbjct: 318 SMTASLTP--VQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375

Query: 361 TEI 363
            ++
Sbjct: 376 VQV 378



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 25/366 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G +H+L + S+ +V++ G +  G LG G  T    S T +     +    V+A E
Sbjct: 285 VAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMT---ASLTPVQAIGLSEGEAVAAGE 341

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            H+      G V+  G+N     G R   + +    P  V AL G     V AG      
Sbjct: 342 THSLVARSDGTVWAWGNN---IEGQRGDGSAKTSTAPVQVTALSG--GFTVAAGKAHALA 396

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +   G V   G N  GQLG G  + R  P  +  L      V +AAG  + L +  +G V
Sbjct: 397 VRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLS---GGVAVAAGDDHSLGLCLDGTV 453

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  LG G      +P  +Q     G  VV V+AG  H +A+ S G V+ WG  
Sbjct: 454 WAWGQNTSGQLGDGTTAQ--RPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSN 509

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G    +  P  ++ L     V V A    +  +   G+V+ +G   F  LG  
Sbjct: 510 ASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLG-- 565

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G + +   P  +  L     +  + G +H++V+   G ++G+G+N   QLG+ T    
Sbjct: 566 -DGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANAS 622

Query: 358 LEPTEI 363
             P ++
Sbjct: 623 FSPVQV 628



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 124/311 (39%), Gaps = 58/311 (18%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G+ H L + S+ +V++ G +L G LG G    +               V V+A ++H
Sbjct: 387 VAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG---VAVAAGDDH 443

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  +   G V+  G N+S   G   T  RP   P  V  L GV    V AG + +  ++ 
Sbjct: 444 SLGLCLDGTVWAWGQNTSGQLGDGTTAQRPA--PVQVTELSGVVA--VAAGTSHSLAVSS 499

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   GSN  GQLG G T  R TP  +A L     VV +AAG  + LAV  +G V+++
Sbjct: 500 DGTVWAWGSNASGQLGDGTTRARLTPVQVAGLS---GVVAVAAGYFHSLAVRSDGTVWAW 556

Query: 181 GSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIHV------ 212
           G+ S F LG G       P                      R+  T    G +       
Sbjct: 557 GNNSFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGN 616

Query: 213 ------------------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
                             V V+AGD   +A+ S G V  WG    G LG G    +  P 
Sbjct: 617 GTANASFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPV 676

Query: 255 PLSSLKSHLAV 265
            ++ L   +AV
Sbjct: 677 GVNGLSGGMAV 687



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 20/249 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L +S + +V++ GS+  G LG G   T     T +     + VV V+A  
Sbjct: 485 VAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDG---TTRARLTPVQVAGLSGVVAVAAGY 541

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  V   G V+  G+NS F  G   +T RP   P  V  L G     V A   +   L
Sbjct: 542 FHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPT--PVRVPGLSG----GVAAAAGYFHSL 595

Query: 119 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +R  G V   G+N +GQLG+G      +P  +  L      V +AAG    LAV  +G 
Sbjct: 596 VLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLS---GGVAVAAGDFQSLAVRSDGT 652

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V ++G      LG G     L P  +          + V+AG+   +A+ S G ++ WG 
Sbjct: 653 VRAWGDNIYGQLGDGTVTTRLAPVGVNGLSGG----MAVAAGNGFSLAVHSGGMLHAWGY 708

Query: 237 GYCGALGHG 245
              G LGHG
Sbjct: 709 NTDGQLGHG 717


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 152/353 (43%), Gaps = 17/353 (4%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L+S+  V   G +  G LG G  T +           A+ V  ++A ++H
Sbjct: 123 IAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAIAAGDDH 180

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
                 SG V   GDN S   G    T+R    P  V  L G     + AG + T  L  
Sbjct: 181 TCARTSSGGVMCWGDNWSGQLGDGTTTDRST--PVAVSGL-GSGVTAIAAGGSHTCALMS 237

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A T +G V  +
Sbjct: 238 SGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS--GVTAIAAGGFHTCARTSSGGVMCW 295

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G+  +  LG G       P A+         V  ++AGD H  AL SSG V+ WG  + G
Sbjct: 296 GANWSGQLGDGTTTARSTPVAVSGLASG---VTAIAAGDSHTCALTSSGGVWCWGYNFFG 352

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   D++ P  +S L S +   + A    T  L+ +G V  +G    G LG    G
Sbjct: 353 QLGDGTTTDRSTPVAVSGLGSGV-TAIAAGDFHTCALMSSGGVRCWGRNKDGQLG---DG 408

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            +     P  +  L    V+ I+ G  HT   T  G +  +GDN   QLG  T
Sbjct: 409 TTTTRSTPVAVSGL-VSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT 460



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 157/358 (43%), Gaps = 25/358 (6%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT   ++S    C G +  G LG G  T +          S   V  ++A  +H
Sbjct: 429 IAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSH 486

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTG 116
              ++ SG V+  G NSS   G     D   P+       A+ G+P +   + +G   T 
Sbjct: 487 TCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPV-------AVSGLPSEVTAIASGGVHTC 539

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            LT  G V   G+N  GQLG G T  R TP +++ L     V+ IAAG  +  A+T +G 
Sbjct: 540 ALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPS--GVMAIAAGDLHTCALTSSGG 597

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ +G+ S+  LG G       P A+         V  ++AG  H  AL SSG V+ WG 
Sbjct: 598 VWCWGANSSGQLGDGTTTARSTPVAVSGLPSG---VTAIAAGSFHTCALTSSGGVWCWGA 654

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            + G LG G   D + P  +S L S +   + A +  T     +G V+ +    +G LG 
Sbjct: 655 NWSGQLGDGSYTDSSTPVAVSGLPSGV-TAIAAGRFHTCARTGSGGVWCWASNRYGQLG- 712

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
            D   +D    P  +  L    V+ I+ G+ HT   T  G +  +G N   QLG   L
Sbjct: 713 -DGSYTDSS-TPVAVSGL-VSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGRL 767



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 154/368 (41%), Gaps = 27/368 (7%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L+S+  V+  G +  G LG G  T +           A+ V  ++A   H
Sbjct: 225 IAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAIAAGGFH 282

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
                 SG V   G N S   G   T   + P+    L   +       + AG + T  L
Sbjct: 283 TCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVT-----AIAAGDSHTCAL 337

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A+  +G V 
Sbjct: 338 TSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGS--GVTAIAAGDFHTCALMSSGGVR 395

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G   +  LG G       P A+         V  ++AGD+H  A  SSG V  WG  +
Sbjct: 396 CWGRNKDGQLGDGTTTTRSTPVAVSGLVSG---VTAIAAGDDHTCARTSSGGVMCWGDNW 452

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 295
            G LG G   D++ P  +S L S +   + A    T  L+ +G V+ +G    G LG   
Sbjct: 453 SGQLGDGTTTDRSTPVAVSGLGSGV-TAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGT 511

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             DRG       P  +  L +  V+ I++G  HT  +T  G +  +G N   QLG  T  
Sbjct: 512 TTDRGT------PVAVSGLPS-EVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTT 564

Query: 356 GCLEPTEI 363
               P  +
Sbjct: 565 ARSTPVAV 572



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 121/264 (45%), Gaps = 12/264 (4%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L+GV    + AG   T  LT  G V   G N  GQLG G T DR TP +++ L     V 
Sbjct: 66  LQGV--TAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS--GVT 121

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IAAG ++  A+  +G V  +G   +  LG G   D   P A+         V  ++AGD
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASG---VTAIAAGD 178

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           +H  A  SSG V  WG  + G LG G   D++ P  +S L S +   + A    T  L+ 
Sbjct: 179 DHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV-TAIAAGGSHTCALMS 237

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+ +G    G LG  D   +D+   P  +  L A  V+ I+ G +HT   T  G + 
Sbjct: 238 SGGVWCWGDNWSGQLG--DGTTTDRS-TPVAVSGL-ASGVTAIAAGGFHTCARTSSGGVM 293

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G N   QLG  T      P  +
Sbjct: 294 CWGANWSGQLGDGTTTARSTPVAV 317


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 380

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 381 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 439

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 497

Query: 226 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 557

Query: 278 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 558 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 613

Query: 337 RLFGFGDNERAQLG 350
           R++ +G     QLG
Sbjct: 614 RVYTWGKGAHGQLG 627



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 429 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 487

Query: 112 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 546

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 547 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 604

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 643



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 329 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 386

Query: 65  VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 387 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 445

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 171
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 446 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 504

Query: 172 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 505 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 562

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 563 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 622

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 340
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 623 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 677



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 370

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 371 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 427

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 428 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 487

Query: 271 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 544

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 580



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 307 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 364

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 365 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 424

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 425 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 473



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 379

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 274
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 440 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 496

Query: 335 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
                       G+LF +GD ++ +LGH      L PT
Sbjct: 497 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 534


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF  R  E LK +   C   +AG N   ++T    V   G+N  G LG GDT +   P+
Sbjct: 8   PIFAFRSPEELKLIRQACVFGSAG-NEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPR 66

Query: 148 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
            +  L  +  + +   +GP  ++A T  G VY++G  +   LG+G  ++ L P  I T  
Sbjct: 67  RLDTLCGKKITCLSYGSGPHVVVA-TAEGEVYTWGHNAYSQLGNGTTNNSLLPCQIST-N 124

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 265
                V  V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ +AV
Sbjct: 125 LVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV 184

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +  +  +V+ G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR---VQRVACG 241

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLG 350
             HT+V+TD G+++ +G N   QLG
Sbjct: 242 YAHTLVLTDEGQMYAWGANSYGQLG 266



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 5/288 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 70
           +  N+ VF+ G++  G LG G +T   V   R++      +  +S  S  H       G+
Sbjct: 37  VTENNEVFALGTNCSGCLGVG-DTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGE 95

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYN 155

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             GQ+G G T ++  P+ +    +    V IA G    +AV  NG VY +G   N  LG 
Sbjct: 156 NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 215

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G+  ++
Sbjct: 216 GNSGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQ 273

Query: 251 TLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           + P P++  K   + +  C     +        VY +G     S+  P
Sbjct: 274 SYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITLP 321



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 12/274 (4%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 117
           N   +V ++ +VF  G N S C G  DT   +  PR ++ L  K + C    +G +    
Sbjct: 32  NEVLYVTENNEVFALGTNCSGCLGVGDTQNSV-EPRRLDTLCGKKITCLSYGSGPHVV-V 89

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V+T G N + QLG+G T +   P  I+       V ++A G  + + +T +G V
Sbjct: 90  ATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEV 149

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G  ++  +G G   ++  PR + +  +  I  V ++ G    +A+  +G VY WG  
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI-AVNIACGQMCSMAVVENGEVYVWGYN 208

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G+  ++  P  +++L+     +V      T VL D G +Y +G   +G LG  
Sbjct: 209 GNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268

Query: 298 DRG-----VSDKVLRPRILDSLRAH--HVSQIST 324
           +R      V   V + R+++    H  H S   T
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKT 302



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 12/115 (10%)

Query: 253 PEPLSSLKSHLAVQVC---ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
           PE L  ++     Q C   +   +   + +   V+  G    G LG  D   +   + PR
Sbjct: 15  PEELKLIR-----QACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGD---TQNSVEPR 66

Query: 310 ILDSLRAHHVSQISTGL-YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            LD+L    ++ +S G   H VV T  G ++ +G N  +QLG+ T    L P +I
Sbjct: 67  RLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQI 121


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 360

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 361 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 419

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 477

Query: 226 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 537

Query: 278 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 538 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 593

Query: 337 RLFGFGDNERAQLG 350
           R++ +G     QLG
Sbjct: 594 RVYTWGKGAHGQLG 607



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 409 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 467

Query: 112 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 526

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 527 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 584

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 623



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 64
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 309 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 366

Query: 65  VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 367 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 425

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 171
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 426 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 484

Query: 172 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 485 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 542

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 543 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 602

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 340
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 603 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 657



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 350

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 351 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 407

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 408 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 467

Query: 271 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 524

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 560



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 287 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 344

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 345 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 404

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 405 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 453



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 359

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 274
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 420 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 476

Query: 335 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
                       G+LF +GD ++ +LGH      L PT
Sbjct: 477 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 514


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)

Query: 39  VSFTRINFPSAAHVVQV------SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 92
           VS T I+ P      Q+      +  E HAA V + G+VF+ G+ +    GH+ T+  + 
Sbjct: 7   VSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK-TSDSVS 65

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIA 150
            P+++++L   P K +  G  +T  +++ G ++  G   H      +   R    P  + 
Sbjct: 66  DPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLI 125

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
              +  SV +IA G  +   V+  G ++++G G+   LGHG+    +QP+ +++ R  G+
Sbjct: 126 RTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLR--GL 183

Query: 211 HVVRVSAGDEHVVALDSS----------GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            V  V+ G  H  A+  +          G ++TWG      LGH D+  K +P  + SL 
Sbjct: 184 RVKSVACGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLI 243

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                  C      F  V  G V+  G    G LG P    SD      +   L+   V 
Sbjct: 244 D------C-----DFTQVSCGVVFTIGSKDHGQLGNPR---SDSACICMVEGPLKTEFVK 289

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            IS+G  H  V+T  G++F +G     QLG
Sbjct: 290 DISSGNSHVAVLTMNGKVFTWGKGTEGQLG 319



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 56/311 (18%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 60
           I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  +  ++    
Sbjct: 29  IACGEKHAAIVTKQGKVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPMKTIALGAK 86

Query: 61  HAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +   V  SG+++  G+   S    +    R P F  +L+    G+   ++  G   T  +
Sbjct: 87  YTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAIV 146

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN---- 174
           +  G + T G  T G LGHGDT     PK +  L  +  V  +A GP +  A+       
Sbjct: 147 SSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGL-RVKSVACGPWHTAAIVETSGTP 205

Query: 175 ------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------------------- 207
                 G ++++G+ S   LGH ++  +L P  +++                        
Sbjct: 206 KSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQVSCGVVFTIGSKDHGQ 265

Query: 208 ------------------KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
                             K   V  +S+G+ HV  L  +G V+TWGKG  G LG GD +D
Sbjct: 266 LGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDYLD 325

Query: 250 KTLPEPLSSLK 260
           +T P  + +L+
Sbjct: 326 RTFPTLVEALE 336



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 18/223 (8%)

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           ++  V  IA G  +   VT  G V+S+G  +   LGH        P+ I +     +  +
Sbjct: 22  QILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPMKTI 81

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAV-QVCAR 270
            +  G ++  A+  SG +Y WG+G        ++  ++   P  L      ++V ++   
Sbjct: 82  AL--GAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACG 139

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
           +  T ++  TG ++ +G   FG LG  D   +  V++P+ ++SLR   V  ++ G +HT 
Sbjct: 140 QWHTAIVSSTGKLFTYGHGTFGVLGHGD---TRSVVQPKEVESLRGLRVKSVACGPWHTA 196

Query: 331 VVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + +           G+LF +G+    +LGH   +  L PT +
Sbjct: 197 AIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRV 239



 Score = 40.0 bits (92), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GH    + +LP  L S +      +   ++   ++   G V+ +G    G LG      S
Sbjct: 5   GHVSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK---TS 61

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           D V  P+I+DSL +  +  I+ G  +T  V+  G L+ +G+
Sbjct: 62  DSVSDPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGE 102



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           PR+L S +   V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 15  PRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKII 70


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 143
           P  ++ L+     QV  G   T  + I+G+V++ G++  GQLG     D          +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDE--- 196
           PTP+ I  L+ V  V+QIA G ++ +A+T +G +YS+G G    LGH +      DE   
Sbjct: 74  PTPRIIELLQSV-KVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 197 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID------ 249
             QP+       K + V +V+ G  H VA+ ++G++Y+WG G CG LGH D         
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADED 192

Query: 250 ----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
               + +P  +++LK    +        T VL D G +Y FG    G LGF +  +S   
Sbjct: 193 GYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGN--ISQMP 250

Query: 306 LR---------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           L          P+ ++SL+   +  +S G  H++ ++  G ++ +G+    QLG D +R
Sbjct: 251 LDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIR 309



 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 150/345 (43%), Gaps = 56/345 (16%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTR----INFPSAAH 51
           Q+  G  HT+ +    +V+S G+S CG LG       P   +   +      I    +  
Sbjct: 27  QVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVK 86

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPRLVEAL 100
           V+Q++  + H   + Q G++++ G       GH DT+           +P  +P+L+  L
Sbjct: 87  VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQP--KPKLIVVL 144

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPTPKSIA 150
           K +  KQV  G   T  +   GH+++ G+   GQLGH DT            +P P+ + 
Sbjct: 145 KNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVT 204

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ---------PR 200
            L+    ++  + G  + + +T  G +Y FG GS   LG G      L          P+
Sbjct: 205 ALKPF-KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPK 263

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----------K 250
            I++   +GI +V +S GD H +AL   G+VY WG+   G LG  D  D          +
Sbjct: 264 KIESL--QGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321

Query: 251 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             P+ + +L +   V +   +  T  L + G +Y FG    G LG
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366



 Score =  104 bits (260), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 162/371 (43%), Gaps = 67/371 (18%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH------RDTNRPIF------RPRLVEA 99
           + QV+  + H   V   G V++ G ++   CG       +D    +        PR++E 
Sbjct: 25  IYQVAGGDGHTVAVDIKGNVYSWGASA---CGQLGLASMKDLPTDVEGYPYQPTPRIIEL 81

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPTPKSI 149
           L+ V   Q+  G   T  LT  G +++ G    GQLGH DT            +P PK I
Sbjct: 82  LQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLI 141

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----------ELQP 199
             L+ +  V Q+A G ++ +AV  NG +YS+G+G+   LGH +             +  P
Sbjct: 142 VVLKNL-EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIP 200

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD------EIDKT-- 251
           R +     K   ++  S GD H + L   G +Y +G G CG LG G+      ++D    
Sbjct: 201 RCVTAL--KPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPF 258

Query: 252 --LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-----RGVSDK 304
             +P+ + SL+    V +      +  L   G VY +G   +G LG  D     +   +K
Sbjct: 259 MPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNK 318

Query: 305 VLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             +P  + + +L    +  IS G  HT+ +T+ G L+ FG N   QLG            
Sbjct: 319 PYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ----------- 367

Query: 363 IFIQEMEEDTG 373
            +++E+E+  G
Sbjct: 368 -YVKELEKGRG 377



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 32/236 (13%)

Query: 143 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------- 195
           +P P  I  L   G + Q+A G  + +AV   G VYS+G+ +   LG     D       
Sbjct: 11  QPHPLEIDMLRNKG-IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 196 ---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID--- 249
              +  PR I+    + + V++++ GD H VAL   G +Y+WG G CG LGH D      
Sbjct: 70  YPYQPTPRIIELL--QSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPK 127

Query: 250 -------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR--- 299
                  +  P+ +  LK+    QV   K  T  +++ G +Y +G    G LG PD    
Sbjct: 128 DEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSF 187

Query: 300 -----GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                G   + + PR + +L+   +   S G  HT+V+TD+G ++ FG     QLG
Sbjct: 188 PADEDGYPYQPI-PRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLG 242


>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
 gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
          Length = 911

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 20/362 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HTL I SN ++++ G ++ G LG+G  T    +   +   + A  ++VSA  +H
Sbjct: 324 LAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGTATLDPATLP-VQVGTDADWIRVSAGLDH 382

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +  +G ++  G N     G+          ++  A   V    + AG   T  +   
Sbjct: 383 SVALKANGTLWAWGYNVRGQLGYGSGTDKHLPVQIGTAHTWVA---INAGTYHTIGVKAD 439

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G + T G NT+ QLG G T D+P P SI    +    + IAA  ++ + +  NG ++++G
Sbjct: 440 GSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIAASNAFSMGLKANGTIWTWG 497

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                  G  +    +Q  + Q ++        ++ G  +++AL + G ++ WG  + G 
Sbjct: 498 LNPFETDGQYKNSSPVQTGSDQNWKS-------IATGSNYILALKADGTLWAWGDNFSGQ 550

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G E  + LP+ + +  + +++   A   ++F +   GS++ +G    G LG    G 
Sbjct: 551 LGDGTEQPRMLPKQIGTATTWVSI-AAASGVQSFGIQADGSLWSWGHNYDGELGL---GT 606

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           + K L P  + +        I TG+ HT+ +   G L+G+G N + QLG  TL     P 
Sbjct: 607 NLKTLVPTRVGT--GTDWISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDGTLVNKYVPV 664

Query: 362 EI 363
           ++
Sbjct: 665 QL 666



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 16/245 (6%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N++GQLG G T+DR TP  I    ++ + V +A G SY LA+  +G ++S+G
Sbjct: 138 GELWGWGYNSNGQLGDGTTMDRRTPVKIGI--DI-NWVAVATGSSYTLALKADGTLWSWG 194

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG G   D   P  I T +         S+G    + + ++G ++TWG    G 
Sbjct: 195 KNQRGQLGDGTTIDRHSPVQIGTEQTWTGIAACFSSG----IGIKANGTLWTWGFNNGGE 250

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G+  +K  P  + + ++ L   V        + VD GS++G+G    G +G  +   
Sbjct: 251 LGIGNNDEKHTPVQVGADQNWLYA-VAGSNHIVALKVD-GSLWGWGLNEAGEIGNGNTVQ 308

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            D  +R    +       + ++ G  HT+ +   G L+ +G N R  LG+ T    L+P 
Sbjct: 309 QDSPVRVGTDNDW-----TTLAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGT--ATLDPA 361

Query: 362 EIFIQ 366
            + +Q
Sbjct: 362 TLPVQ 366



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 22/354 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G YHT+ + ++ S+++ G +    LG G    Q V  +    P     + ++AS 
Sbjct: 424 VAINAGTYHTIGVKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIAASN 481

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  +  +G ++T G N     G    + P      V+       K +  G N+   L 
Sbjct: 482 AFSMGLKANGTIWTWGLNPFETDGQYKNSSP------VQTGSDQNWKSIATGSNYILALK 535

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   G N  GQLG G    R  PK I       S+   AA       +  +G ++S
Sbjct: 536 ADGTLWAWGDNFSGQLGDGTEQPRMLPKQIGTATTWVSIA--AASGVQSFGIQADGSLWS 593

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G     L P  + T    G   + +  G  H + + S G ++ WG    
Sbjct: 594 WGHNYDGELGLGTNLKTLVPTRVGT----GTDWISIKTGVGHTLGIKSDGTLWGWGTNRQ 649

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G  ++K +P  L + +    + +         L   G+++ +G   +G +     
Sbjct: 650 GQLGDGTLVNKYVPVQLGTDRDW--INIAGGTIHNICLKSNGTLWAWGRNNYGQV----- 702

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           G  + + + R++      +   +   L  +  +   G L+  G N   QLG  T
Sbjct: 703 GTGNLITQDRMVQISAEQNWIDVYASLDQSFAIRADGSLWACGLNSSGQLGDGT 756



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 61/409 (14%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + + TG  +TL L ++ +++S G +  G LG G   T     + +   +      ++A  
Sbjct: 172 VAVATGSSYTLALKADGTLWSWGKNQRGQLGDG---TTIDRHSPVQIGTEQTWTGIAACF 228

Query: 60  NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           +    +  +G ++T G N+      G+ D       P  V A +        AG N    
Sbjct: 229 SSGIGIKANGTLWTWGFNNGGELGIGNNDEKH---TPVQVGADQN--WLYAVAGSNHIVA 283

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           L + G +   G N  G++G+G+T+ + +P  +    +      +AAG ++ LA+  NG +
Sbjct: 284 LKVDGSLWGWGLNEAGEIGNGNTVQQDSPVRVGTDNDW---TTLAAGSNHTLAIKSNGTL 340

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG+G     L P  +          +RVSAG +H VAL ++G ++ WG  
Sbjct: 341 WAWGHNVRGNLGNGTA--TLDPATLPVQVGTDADWIRVSAGLDHSVALKANGTLWAWGYN 398

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---------- 287
             G LG+G   DK LP  + +  +H  V + A    T  +   GS++ +G          
Sbjct: 399 VRGQLGYGSGTDKHLPVQIGT--AHTWVAINAGTYHTIGVKADGSLWTWGDNTNAQLGDG 456

Query: 288 -----------------WMGFG-----SLGFPDRG-VSDKVLRPRILDSLRAH------- 317
                            W+        S+G    G +    L P   D    +       
Sbjct: 457 GTADQPVPHSIRTAPDDWISIAASNAFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTG 516

Query: 318 ---HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              +   I+TG  + + +   G L+ +GDN   QLG  T +  + P +I
Sbjct: 517 SDQNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLPKQI 565



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 15/250 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I TG  + L L ++ ++++ G +  G LG G E  + +        +A   V ++A+   
Sbjct: 524 IATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLP---KQIGTATTWVSIAAASGV 580

Query: 62  AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +F +Q+ G +++ G N     G   TN     P  V    G     +  G+  T  +  
Sbjct: 581 QSFGIQADGSLWSWGHNYDGELG-LGTNLKTLVPTRVGT--GTDWISIKTGVGHTLGIKS 637

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G+N  GQLG G  +++  P  +    +    + IA G  + + +  NG ++++
Sbjct: 638 DGTLWGWGTNRQGQLGDGTLVNKYVPVQLGTDRDW---INIAGGTIHNICLKSNGTLWAW 694

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G  +   +G G      Q R +Q    +  + + V A  +   A+ + G ++  G    G
Sbjct: 695 GRNNYGQVGTGNL--ITQDRMVQISAEQ--NWIDVYASLDQSFAIRADGSLWACGLNSSG 750

Query: 241 ALGHGDEIDK 250
            LG G  +D+
Sbjct: 751 QLGDGTSVDR 760



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 14/198 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I TG  HTL I S+ +++  G++  G LG G   T    +  +   +    + ++   
Sbjct: 623 ISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDG---TLVNKYVPVQLGTDRDWINIAGGT 679

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +  +G ++  G N+    G   T   I + R+V+         V A L+ +  + 
Sbjct: 680 IHNICLKSNGTLWAWGRNN---YGQVGTGNLITQDRMVQISAEQNWIDVYASLDQSFAIR 736

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +  CG N+ GQLG G ++DR    ++   ++    + +AAG  + LA+  N + Y 
Sbjct: 737 ADGSLWACGLNSSGQLGDGTSVDRAAMVAVGTNQK---WISLAAGNYHTLALPVNRIQYC 793

Query: 180 FGSGSNFCLGHGEQHDEL 197
            G+G+ +   +GE  D +
Sbjct: 794 -GTGTAY---YGELGDHV 807


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 34/310 (10%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  GR  TL+++ +  V   G +  G LG G +T    + T +   +  H++ +    +
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-DTRNRTAPTPVETLNNQHIIDIGVGLD 203

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH--------------------------RDTNRPIFR- 93
           H+  V ++G VF  G N     G                           R+   P    
Sbjct: 204 HSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEY 263

Query: 94  --PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPT-PKSI 149
             P LV  L+ +    V  G + T  L+ RG+V++ GSN  G LG G  L  R T P  I
Sbjct: 264 TLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKI 323

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK 208
              E    + Q+++G S+ L +T  G VYS G G+   LG G +  +   P  ++ F + 
Sbjct: 324 KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQN 383

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
            I +V+V+AG  H +ALD  G VYTWG G  G LGHG+E D+ LP+ ++       + + 
Sbjct: 384 KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVIDIF 443

Query: 269 ARKRKTFVLV 278
           A    + VL+
Sbjct: 444 AGIDNSLVLI 453



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 135/321 (42%), Gaps = 46/321 (14%)

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           S +V+  G N S   G+       +R P  ++ LK    ++V  G +FT  LT  G V  
Sbjct: 108 SNKVYMWGTNKS---GNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            G N  GQLG GDT +R  P    P+E + +  ++ I  G  + +AVT  G V+ +G   
Sbjct: 165 FGENNFGQLGLGDTRNRTAP---TPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 185 NFCLGH-----------------------GEQHDELQPRAIQTFRR--KGIHVVRVSA-- 217
              +G                        G   +++ P    T      G+  +++S   
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 218 -GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRK 273
            G +    L + G VY++G    G LG G E+   + +P     +  +    Q+ +    
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASH 341

Query: 274 TFVLVDTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTV 330
           T  L   G+VY  GW   G LG   D    D    P +L     + +   +++ G  H++
Sbjct: 342 TLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDS---PTLLKYFNQNKIKIVKVAAGGSHSM 398

Query: 331 VVTDRGRLFGFGDNERAQLGH 351
            + D+GR++ +G+    +LGH
Sbjct: 399 ALDDQGRVYTWGNGSNGKLGH 419



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 38/268 (14%)

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           TI   V+  G+N  G +       R  P +I  L+    V ++  G S+ L +T +G V 
Sbjct: 106 TISNKVYMWGTNKSGNMSLPSEQYR-FPTTIDLLKNT-FVEKVIGGRSFTLVLTRDGKVL 163

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            FG  +   LG G+  +   P  ++T   +  H++ +  G +H +A+  +G+V+ WG   
Sbjct: 164 GFGENNFGQLGLGDTRNRTAPTPVETLNNQ--HIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 239 CGALGH----------------GDE--------------IDKTLPEPLSSLKSHLAVQVC 268
            G +G                 G+E              ++ TLP  +  L+      V 
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLY 327
                TF+L   G+VY FG    G+LG     +  +V +P +I  +     + Q+S+G  
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSE-LKGRVTKPTKIKFTETNEKIKQLSSGAS 340

Query: 328 HTVVVTDRGRLF--GFGDNERAQLGHDT 353
           HT+ +T  G ++  G+G   R  LG DT
Sbjct: 341 HTLFLTSGGNVYSCGWGTEGRLGLGMDT 368



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 14/206 (6%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPR---------AIQTFRRKGIHVVRVSAGDEHVVALDS 227
           ++SFGS  N  LG    +D+L P           I+ F    ++   ++  +++      
Sbjct: 49  LFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTD-EQNENDPTI 107

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           S  VY WG    G +    E     P  +  LK+    +V   +  T VL   G V GFG
Sbjct: 108 SNKVYMWGTNKSGNMSLPSE-QYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFG 166

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              FG LG  D   +     P  +++L   H+  I  GL H++ VT  G +FG+G N   
Sbjct: 167 ENNFGQLGLGD---TRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEG 223

Query: 348 QLGHDTLRGCLEPTEIFIQEMEEDTG 373
           Q+G   +      +   + + EE+ G
Sbjct: 224 QIGQKVVEYTRMNSTTEVMDGEEEGG 249



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 129/327 (39%), Gaps = 43/327 (13%)

Query: 42  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 101
           T I+      V +V    +    + + G+V   G+N+    G  DT R    P  VE L 
Sbjct: 133 TTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDT-RNRTAPTPVETLN 191

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-----------------------G 138
                 +  GL+ +  +T  GHV   G N  GQ+G                        G
Sbjct: 192 NQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAG 251

Query: 139 DTLDRPTPK------SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
              ++  P       ++ P  E   +  +  G      ++  G VYSFGS     LG G 
Sbjct: 252 SLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGS 311

Query: 193 QHDELQPRAIQ----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DE 247
              EL+ R  +     F      + ++S+G  H + L S G VY+ G G  G LG G D 
Sbjct: 312 ---ELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDT 368

Query: 248 IDKTLPEPLSSLKSH--LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
            ++  P  L     +    V+V A    +  L D G VY +G    G LG  +   SD+ 
Sbjct: 369 SNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNE--SDEN 426

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVV 332
           L P+ ++     +V  I  G+ +++V+
Sbjct: 427 L-PKQINFFSHSNVIDIFAGIDNSLVL 452


>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
          Length = 1051

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 41/289 (14%)

Query: 80  FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD----- 298
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D     
Sbjct: 172 GKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKGIK 231

Query: 299 RGVSDKVLRPRILDS----------LRAHHVSQISTGLYHTVVVTDRGR 337
           +G  DK    R L S          LR   V  IS G  HT V+T   R
Sbjct: 232 QGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTKEHR 280



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 17/216 (7%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 223 VALDSSGYVYTWGKGYCGALGHGDE-------IDKT 251
            AL  SG V+ WG    G LG  DE       +DKT
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKGIKQGALDKT 238



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFSSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIH----------------VVRVSAGDEHVVAL 225
              LG  ++    Q    +T   +G++                VV +S GDEH   L
Sbjct: 219 AGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVL 275



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 7/201 (3%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           SV ++A G ++ + +  +G VY+ G  +   LGH  + +  +P  I     +  H++ V+
Sbjct: 35  SVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQ--HIIHVA 90

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTF 275
            G+ H +AL   G +++WG G  G LG     D   +P  +  L     +QV        
Sbjct: 91  CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            L   G  + +G    G LG      S     P+ + SL    ++Q++ G  H+  ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFSSQA--SPQRVRSLEGIPLAQVAAGGAHSFALSLS 208

Query: 336 GRLFGFGDNERAQLGHDTLRG 356
           G +FG+G N   QLG    +G
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKG 229


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 20/304 (6%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            HAA   + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALATKQGEVFCWGHGKWGRLGQK-IDMDISSPKIVDSLNGLHVKNVACGEYHTCALT 372

Query: 120 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             G V+T G++      L  G T  +  P+ +    +  S+  +A G  +   V+  G +
Sbjct: 373 DSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRL 432

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 226
           +++G G+   LGHG+      P+ +++    G+ V   + G  H  A+            
Sbjct: 433 FTYGDGTFGVLGHGDLRSYSSPKEVESL--SGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           +SG ++TWG G  G LGH D   K +P  ++ L  +  VQV   +  T  L + G V+  
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAM 550

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P     DK +   +   L+   V  ISTG YH  V+T  G ++ +G  E 
Sbjct: 551 GSAKYGQLGNPH--ARDKAV--MVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRGEN 606

Query: 347 AQLG 350
            QLG
Sbjct: 607 GQLG 610



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 25/275 (9%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +  G YHT  +++S  V++ G+ +C   +L  G   +Q +            +  V+  E
Sbjct: 361 VACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGE 420

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 116
            H A V   G++FT GD +    GH D  R    P+ VE+L G+  +    G   T    
Sbjct: 421 WHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 117 --------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
                   + +  G + T G    G+LGH D   +  P  +  L +    VQ++ G    
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY-DFVQVSCGRMLT 538

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           +A+T  G V++ GS     LG+    D+   ++ +  Q F      V  +S G  HV  L
Sbjct: 539 VALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEF------VKVISTGSYHVAVL 592

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            S G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 593 TSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALR 627



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 141/345 (40%), Gaps = 29/345 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAF 64
           G++  L      VF  G    G LG   +    +S  +I +  +  HV  V+  E H   
Sbjct: 313 GKHAALATKQGEVFCWGHGKWGRLGQKIDMD--ISSPKIVDSLNGLHVKNVACGEYHTCA 370

Query: 65  VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  SG+V+T G++   CC         R  + P +L  +L G+    V  G   T  ++ 
Sbjct: 371 LTDSGEVYTWGND--VCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSS 428

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--------- 171
            G + T G  T G LGHGD     +PK +  L   G  V+ AA  S+  A          
Sbjct: 429 CGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLS--GLRVRSAACGSWHTAAIVEVMFDRF 486

Query: 172 ---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
              + +G ++++G G    LGH +   +L P  +          V+VS G    VAL + 
Sbjct: 487 RYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQL--VDYDFVQVSCGRMLTVALTNM 544

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+  G    G LG+    DK +      LK      +        VL   GSVY +G 
Sbjct: 545 GKVFAMGSAKYGQLGNPHARDKAVMVE-GQLKQEFVKVISTGSYHVAVLTSGGSVYTWGR 603

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
              G LG  D   ++    P  +++LR   V+ I+ G   T  ++
Sbjct: 604 GENGQLGLGD---TEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 22/277 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +    +  G       T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 209
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKNVACGEYHTCALTDSGEVYTWGN--DVCCADLLIEGRTRSQWIPQKLGG-SLDG 410

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAAC 470

Query: 270 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
               T  +V+           +G ++ +G    G LG  D G     L P  +  L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSK---LVPTRVTQLVDYD 527

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 21/221 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  IA G  +    T  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSL--NGLHVKNVAC 363

Query: 218 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKT 274
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L  SL       V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 334 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               DR       G+LF +GD +  +LGH      L PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRV 520



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 49
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + +S  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHT 475

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V    +   +   SG++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV-PTRVTQLVDYDFVQVS 532

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V   GS  +GQLG+    D+         +E   V  I+ G  ++ 
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKV--ISTGSYHVA 590

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +T  G VY++G G N  LG G+  D   P  ++  R + ++ +
Sbjct: 591 VLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 2/167 (1%)

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L P+ +++     +H   ++ G +H       G V+ WG G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIV 350

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
            SL       V   +  T  L D+G VY +G     +    +     + +  ++  SL  
Sbjct: 351 DSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDG 410

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 21/304 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HAA + + G+VF  GD S    GH+  N  +  P++VE+L  V  K V  G
Sbjct: 312 VRSISLGRKHAALITKRGEVFCWGDGSRGKLGHK-VNMDVGMPKVVESLDDVHIKSVVCG 370

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 168
              T  LT  G ++T G N +G        T  +  P K   PL+ + ++ ++A G  + 
Sbjct: 371 EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGI-TISKVACGEWHT 429

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
             V+ +G ++++G G+   LGHG       P+ + + R  G+ V  V+ G  H  A+   
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLR--GLSVKSVACGSWHTAAIVDI 487

Query: 228 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                      G ++TWG G  G LGH D   K +P  ++ L  +  ++V   +  T  L
Sbjct: 488 IADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVSCGRMLTVAL 547

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
            +TG VY  G    G LG P     DK +   +   L+   V +IS+G YH  V+T  G 
Sbjct: 548 TNTGKVYTMGSSVHGQLGNPQ--AKDKSITI-VEGKLKEEFVKEISSGSYHVAVLTSGGN 604

Query: 338 LFGF 341
           ++ +
Sbjct: 605 VYTW 608



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 150/364 (41%), Gaps = 37/364 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 60
           I+ GR H  LI+    VF  G    G LGH  +    V   ++       H+  V   E 
Sbjct: 315 ISLGRKHAALITKRGEVFCWGDGSRGKLGH--KVNMDVGMPKVVESLDDVHIKSVVCGEY 372

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTN----RPIFRP-RLVEALKGVPCKQVTAGLNFT 115
               +  SG+++T GDN +   G   T+    R  + P +L   L G+   +V  G   T
Sbjct: 373 QTCALTHSGELYTWGDNKN---GANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHT 429

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-- 173
             +++ G + T G  T G LGHG       PK +A L  + SV  +A G  +  A+    
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGL-SVKSVACGSWHTAAIVDII 488

Query: 174 ---------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
                     G ++++G G    LGH +   +L P  +          +RVS G    VA
Sbjct: 489 ADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL--VDYDFIRVSCGRMLTVA 546

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           L ++G VYT G    G LG+    DK++      LK     ++ +      VL   G+VY
Sbjct: 547 LTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVY 606

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRG 336
              W   G+       + D+   P  +++LR   V  I+ G        L+ ++ VTD+ 
Sbjct: 607 --TWGKGGNGQLGLGNIEDRN-SPTYVEALRDREVESIACGSNLTAAICLHKSISVTDQS 663

Query: 337 RLFG 340
              G
Sbjct: 664 SCSG 667



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  + ++ G      +T RG V   G  + G+LGH   +D   PK +  L+
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLD 360

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHV 212
           +V  +  +  G     A+T +G +Y++G   N      E     Q    + F    GI +
Sbjct: 361 DV-HIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITI 419

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
            +V+ G+ H   +  SG ++T+G G  G LGHG     + P+ ++SL+      V     
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479

Query: 273 KTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
            T  +VD            G ++ +G    G LG  D    +K L P  +  L  +   +
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDM---EKKLVPTCVAKLVDYDFIR 536

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +S G   TV +T+ G+++  G +   QLG+
Sbjct: 537 VSCGRMLTVALTNTGKVYTMGSSVHGQLGN 566



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
           Q D L P+ +++     + V  +S G +H   +   G V+ WG G  G LGH   +D  +
Sbjct: 295 QVDALVPKLLESTAM--LDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGM 352

Query: 253 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
           P+ + SL   H+   VC  + +T  L  +G +Y +G    G+    +     + L  ++ 
Sbjct: 353 PKVVESLDDVHIKSVVCG-EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLF 411

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    +S+++ G +HT +V+  G+LF +GD     LGH +L+    P E+
Sbjct: 412 GPLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEV 463



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           ++  G +HT ++S S  +F+ G    GVLGHG  + Q VS  + +       V  V+   
Sbjct: 421 KVACGEWHTAIVSLSGQLFTYGDGTFGVLGHG--SLQSVSHPKEVASLRGLSVKSVACGS 478

Query: 60  NHAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            H A ++             G++FT GD      GH D  + +  P  V  L      +V
Sbjct: 479 WHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV-PTCVAKLVDYDFIRV 537

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + G   T  LT  G V+T GS+ HGQLG+    D+        L+E   V +I++G  ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKE-EFVKEISSGSYHV 596

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
             +T  G VY++G G N  LG G   D   P  ++  R + +  +
Sbjct: 597 AVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESI 641


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 6/242 (2%)

Query: 93  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           RP+LVE L G+    +  G   +  +T  GHV T G   +G+LGHGD+ D+  PK +  L
Sbjct: 9   RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 68

Query: 153 EEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
               ++ +   +G +  L +T +  V+S+G G    LG G       P  I++    G+ 
Sbjct: 69  LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLG 126

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           VV+V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+    + +    
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
                  D+G VY +G    G LG    G    +  PR++ +L+  H+ +++ G  HT+ 
Sbjct: 187 LHCVACSDSGEVYTWGDNDEGQLG---DGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLA 243

Query: 332 VT 333
           ++
Sbjct: 244 LS 245



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           HG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+  D+
Sbjct: 1   HGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP  +
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 119

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
            SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +L+ 
Sbjct: 120 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAALQG 176

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 177 KKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWP 220



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 6/228 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACG 79

Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
                 L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +
Sbjct: 80  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSV 138

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG
Sbjct: 139 ALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSG 196

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
            VYTWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 197 EVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLAL 244



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
           HG+ +    P+ +  L       +      +  +  +G V  +G   +G LG  D   S+
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---SE 57

Query: 304 KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P 
Sbjct: 58  DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 362 EI 363
           +I
Sbjct: 118 KI 119


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSY 167
           A  N   ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHV 87

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +L+ T +GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL +
Sbjct: 88  LLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAA 145

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            G V+ WG   CG +G G   ++  P  ++S L +   V +   +  +  ++D+G VYG+
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGW 205

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G+ G G LG  + G     L P  + +L++  V+QI  G  HT+ +TD G L+ +G N  
Sbjct: 206 GYNGNGQLGLGNNG---NQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262

Query: 347 AQLGHDTLRGCLEPTEIFIQE 367
            QLG  +    L PT I +++
Sbjct: 263 GQLGTGSKNNLLSPTPIMVEK 283



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 6/253 (2%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           AS N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G     
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHV 87

Query: 117 FLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  +   +G G   ++  PR + +       VV ++ G    +A+  SG VY WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK-RVVSIACGQTSSMAVLDSGEVYGWG 206

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G+  ++  P  +++L+S    Q+      T  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266

Query: 296 FPDRGVSDKVLRP 308
               G  + +L P
Sbjct: 267 ---TGSKNNLLSP 276



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  ++    + + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTP--VRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G + +   P P+   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGSKNNLLSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       +      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G  +    +  P  V AL+ V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALQSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNG 175
             G ++  G+NT+GQLG G  + L  PTP  +    E   VV+IAA  S     A T  G
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTPIMV----EKERVVEIAACHSTHTSAAKTQGG 305

Query: 176 VVYSFG 181
            VY +G
Sbjct: 306 HVYMWG 311


>gi|444912395|ref|ZP_21232559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716977|gb|ELW57814.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 391

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 19/357 (5%)

Query: 9   HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HTL +  + +V++ G +  G LG G   ++    T    P  + V+ V+A  NH+  +  
Sbjct: 49  HTLALRYDGTVWAWGENGNGELGDGTTLSRS---TPAQVPGLSGVLAVAAGRNHSLVLRV 105

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G V+  G NSS   G+  T   +  P  V  L GV      A  +F   L   G V   
Sbjct: 106 DGTVWAWGGNSSGQLGNGTTTSSLV-PLQVPGLGGVKAIAAVAYSSFA--LLSDGTVRAW 162

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G N  G LG G T DR TP    P+  +   V IAAG  +  AV  NG V  +G      
Sbjct: 163 GRNGFGVLGDGTTSDRYTP---VPVLNLSQAVSIAAGGDHAFAVLANGTVMGWGYNYFGQ 219

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           +G G       P  ++     G+  V V  G    VA  S G V++WG  + G LG G  
Sbjct: 220 VGDGTTISRTAPVPVKNL--TGVSAVSV-MGSNSSVARKSDGTVWSWGDNWVGQLGVGSA 276

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
           +  T P P+       AV + +       L+  G++ G+G+  +G LG    G +     
Sbjct: 277 V-STSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKGWGYNLYGQLG---DGTTRTRYT 332

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           P ++  L    V  ++ G  H++ VT  G+++ +GDN +  LG  T    L P  + 
Sbjct: 333 PVLVPGL--AQVVHLAAGTLHSLAVTADGKVWAWGDNAQGTLGDGTTTQRLAPVTVV 387



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 130/309 (42%), Gaps = 19/309 (6%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           A+++H   +   G V+  G+N +   G   T      P  V  L GV    V AG N + 
Sbjct: 45  AADDHTLALRYDGTVWAWGENGNGELGD-GTTLSRSTPAQVPGLSGVLA--VAAGRNHSL 101

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            L + G V   G N+ GQLG+G T     P  +  L   G V  IAA      A+  +G 
Sbjct: 102 VLRVDGTVWAWGGNSSGQLGNGTTTSSLVPLQVPGL---GGVKAIAAVAYSSFALLSDGT 158

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V ++G      LG G   D   P  +    +     V ++AG +H  A+ ++G V  WG 
Sbjct: 159 VRAWGRNGFGVLGDGTTSDRYTPVPVLNLSQA----VSIAAGGDHAFAVLANGTVMGWGY 214

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG--WMGFGSL 294
            Y G +G G  I +T P P+ +L    AV V           D G+V+ +G  W+G   +
Sbjct: 215 NYFGQVGDGTTISRTAPVPVKNLTGVSAVSVMGSNSSVARKSD-GTVWSWGDNWVGQLGV 273

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G         V  P I  ++       I +G+ H + +   G L G+G N   QLG  T 
Sbjct: 274 GSAVSTSPTPVQVPGITTAV------AIQSGVGHGMALLADGTLKGWGYNLYGQLGDGTT 327

Query: 355 RGCLEPTEI 363
           R    P  +
Sbjct: 328 RTRYTPVLV 336



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 16/207 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H   +++N +V   G +  G +G G   ++       N  +    V V  S 
Sbjct: 191 VSIAAGGDHAFAVLANGTVMGWGYNYFGQVGDGTTISRTAPVPVKNL-TGVSAVSVMGSN 249

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +  A     G V++ GDN     G       +  P+  P +  A+       + +G+   
Sbjct: 250 SSVAR-KSDGTVWSWGDNWVGQLGVGSAVSTSPTPVQVPGITTAVA------IQSGVGHG 302

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             L   G +   G N +GQLG G T  R TP  +  L +V   V +AAG  + LAVT +G
Sbjct: 303 MALLADGTLKGWGYNLYGQLGDGTTRTRYTPVLVPGLAQV---VHLAAGTLHSLAVTADG 359

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAI 202
            V+++G  +   LG G     L P  +
Sbjct: 360 KVWAWGDNAQGTLGDGTTTQRLAPVTV 386



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 5/141 (3%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           S+ +V+S G +  G LG G   +   S T +  P     V + +   H   +L  G +  
Sbjct: 256 SDGTVWSWGDNWVGQLGVGSAVS--TSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKG 313

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G   T R  + P LV  L  V    + AG   +  +T  G V   G N  G
Sbjct: 314 WGYNLYGQLGD-GTTRTRYTPVLVPGLAQV--VHLAAGTLHSLAVTADGKVWAWGDNAQG 370

Query: 134 QLGHGDTLDRPTPKSIAPLEE 154
            LG G T  R  P ++  L +
Sbjct: 371 TLGDGTTTQRLAPVTVVGLPQ 391


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 29/367 (7%)

Query: 12  LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + + SSV + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSV-VAGSRNSLA-ICDDGK 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSG 183
            +GQ G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+S+G  
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ- 177

Query: 184 SNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 238
                          P  I+      R +G+  VR ++ G  H +AL   G ++ WG   
Sbjct: 178 ------------PWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG GD   ++ P  +  L     V + A    +  L D G VYG+G    G LGF D
Sbjct: 226 YGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 285

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              S K++ P+ ++ L    + Q+S G  H+V +T  GR++ FG  +  +LG+       
Sbjct: 286 NDKSSKMV-PQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTG 344

Query: 359 EPTEIFI 365
           +P E+ I
Sbjct: 345 QPMEVPI 351



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 134/304 (44%), Gaps = 19/304 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   +  ++VQ +    H
Sbjct: 43  VVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWH 102

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 114
              V   G+ +  G N    CG       DT RP+ R  ++       +  +QV AG   
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTH 162

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  LT  GHV + G         GD      P  +  LE    V  IA G  + LA+  +
Sbjct: 163 SVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLER---VRLIAVGAFHNLALQED 215

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++++G+     LG G+     QP  +Q     G+ +V ++AG  H  AL   G VY W
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPITVQGL--SGLTLVDIAAGGWHSTALTDDGEVYGW 273

Query: 235 GKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G+G  G LG G  D+  K +P+ ++ L     VQV      +  L   G +Y FG    G
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHG 333

Query: 293 SLGF 296
            LG+
Sbjct: 334 RLGY 337


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 168/353 (47%), Gaps = 25/353 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L   S+ SV++ GS+  G LG G   T   S + +     + VV V+A  
Sbjct: 399 VAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDG---TTRNSTSPVQVQGLSGVVAVAAGF 455

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H+  +   G V+  G N+    G    TNR +  P  V+ L GV    V AG N +  +
Sbjct: 456 DHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLV--P--VQVLSGVVA--VAAGSNHSLAV 509

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V T GSN +GQLG G T +R  P  +  L  V +V   AAG  + LAV  +G V+
Sbjct: 510 RSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAV---AAGSFHSLAVHSDGSVW 566

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++GS S+  LG G   + L P  +          V V+AG  H + + S G V+TWG   
Sbjct: 567 AWGSNSSGELGDGTTSNRLVPGRVPGLSGG----VAVAAGGFHSLVVRSDGTVWTWGSNS 622

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G    +++P  +  L   +AV   A    +  +   G+V+ +G+  +G LG   
Sbjct: 623 FGELGDGTTTSRSVPVQVQGLSGVVAVD--AGNSHSLAVRSDGTVWTWGYNSYGQLG--- 677

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            G + +   P  +  L    V  ++TG  H +VV   G ++ +G N   QLG+
Sbjct: 678 DGTTTRRSVPVQVPGLSG--VVAMATGALHPLVVRSDGTVWAWGYNSFGQLGN 728



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 162/359 (45%), Gaps = 23/359 (6%)

Query: 6   GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G YH+L L S+ SV++ G +  G LG    T++ V    +     +  + V+A  +H+  
Sbjct: 304 GSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVP---VQVRGLSGGMAVTAGSSHSLA 360

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           V   G V+  G N S   G   TN     P  V+ L G     V AG N +      G V
Sbjct: 361 VGSDGTVWAWGSNFSGERGEGTTNNRA-SPVQVQGLGG--GVAVAAGFNHSLAARSDGSV 417

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              GSN  GQLG G T +  +P  +  L     VV +AAG  + LA+  +G V+++GS +
Sbjct: 418 WAWGSNDSGQLGDGTTRNSTSPVQVQGLS---GVVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG G   + L P  +Q        VV V+AG  H +A+ S G V+TWG    G LG 
Sbjct: 475 YGQLGEGTTTNRLVP--VQVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGD 528

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G   ++ +P  +  L    A  V A    +  +   GSV+ +G    G LG    G +  
Sbjct: 529 GTTSNRLVPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGELG---DGTTSN 583

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L P  +  L       ++ G +H++VV   G ++ +G N   +LG  T      P ++
Sbjct: 584 RLVPGRVPGLSGGVA--VAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQV 640



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 39/372 (10%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRINFP--SAAHVVQV 55
           MQ   GR+ + L+             GVL   G G  T +    T    P   A    ++
Sbjct: 1   MQGNAGRWMSRLLG---------VWIGVLMGVGCGLPTDESAEQTSRGAPLRDAPSRARL 51

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +A  +++  +   G V+  G N     G   T      P  V  L GV    V AG + +
Sbjct: 52  AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGLSGVVA--VAAGSSHS 108

Query: 116 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
             L +R  G V   GSN+ GQLG G T  R TP  +  L     VV +AAG SY LAV  
Sbjct: 109 --LAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS---GVVSVAAGSSYSLAVRS 163

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G V+++GS  +  LG G   + L P  +Q     G  VV V+AG  H +A+ S G V+ 
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSG--VVSVAAGSSHSLAVLSDGSVWA 219

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G +I++ +P  +  L     V V A    +  +   G+V+ +G   FG 
Sbjct: 220 WGANSSGQLGDGTKINRLVPVQVPGLSG--VVAVAAGAAHSLAVRSDGTVWTWGANSFGQ 277

Query: 294 LGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           LG  D   SD+++  R+  L  + A  V     G YH++ +   G ++ +G N   QLG 
Sbjct: 278 LG--DGTKSDRLVPVRVQGLSGVVASDV-----GSYHSLALRSDGSVWAWGHNSSGQLGD 330

Query: 352 DTLRGCLEPTEI 363
           D+      P ++
Sbjct: 331 DSSTSRSVPVQV 342



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 160/370 (43%), Gaps = 31/370 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  ++L + S+ +V++ GS+  G LG G  + + V    +  P  + VV V+A  
Sbjct: 149 VSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVP---VQVPGLSGVVSVAAGS 205

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +H+  VL  G V+  G NSS   G     NR  P+  P L   +        +       
Sbjct: 206 SHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHS------- 258

Query: 117 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +R  G V T G+N+ GQLG G   DR  P  +  L     VV    G  + LA+  +
Sbjct: 259 -LAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLS---GVVASDVGSYHSLALRSD 314

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+++G  S+  LG     D    R++    R     + V+AG  H +A+ S G V+ W
Sbjct: 315 GSVWAWGHNSSGQLG----DDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVWAW 370

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G  + G  G G   ++  P  +  L   +A  V A    +      GSV+ +G    G L
Sbjct: 371 GSNFSGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWGSNDSGQL 428

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G +     P  +  L    V  ++ G  H++ +   G ++ +G N   QLG  T 
Sbjct: 429 G---DGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483

Query: 355 RGCLEPTEIF 364
              L P ++ 
Sbjct: 484 TNRLVPVQVL 493



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 22/256 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ +V++ GS+L G LG G  + + V    +     + V  V+A  
Sbjct: 497 VAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP---VQVQGLSGVAAVAAGS 553

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 117
            H+  V   G V+  G NSS   G   T+  +  P  V  L G     V AG    GF  
Sbjct: 554 FHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSG--GVAVAAG----GFHS 606

Query: 118 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
           L +R  G V T GSN+ G+LG G T  R  P  +  L     VV + AG S+ LAV  +G
Sbjct: 607 LVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS---GVVAVDAGNSHSLAVRSDG 663

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  S   LG G       P  +Q     G  VV ++ G  H + + S G V+ WG
Sbjct: 664 TVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSG--VVAMATGALHPLVVRSDGTVWAWG 719

Query: 236 KGYCGALGHGDEIDKT 251
               G LG+G  +  T
Sbjct: 720 YNSFGQLGNGSPLFAT 735


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 5/252 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN--GIKIIQVSCGHY 138

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSL 198

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 340 GFGDNERAQLGH 351
            FGDN   QLG+
Sbjct: 259 TFGDNCSGQLGY 270



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGTHSFALSL 198

Query: 228 SGYVYTWGKGYCGALG-HGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G  +     +PLS  +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGTHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +  G  + +GS S   L   G        +P +I   +  G  VV +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG--VVYISCGDEHTAVLTQD 254

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 131/280 (46%), Gaps = 31/280 (11%)

Query: 107  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTP----KSIAPLE--EVGSV 158
            Q+  G   T  +T   H++T G    G+LGHG   D   P P     S+   E  E G V
Sbjct: 1248 QIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGV 1307

Query: 159  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            V ++ G  + + VTGNG +Y FG G    LG GE    L P  +        ++  V+ G
Sbjct: 1308 VDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLR-----NIAAVACG 1362

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
             EH +AL S G V+ +G G+ G LG+G E D+ LP  +  L+ +  V + A +  +  L 
Sbjct: 1363 REHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALS 1422

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD--------SLRAHHVSQIST---GLY 327
              G V  +   GFGS G    G  D  L P ++D            H +S +++   G Y
Sbjct: 1423 RDGEVLTW---GFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSY 1479

Query: 328  HTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEPTEI 363
            HT+  T+ G L+G+GD    QLG + L       L P EI
Sbjct: 1480 HTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 30/331 (9%)

Query: 35   TTQCVSFTR-INFPSAAH-VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNR 89
            +T+ +S  R ++FP     VVQ++    H A +     ++T G       GH    D   
Sbjct: 1227 STENLSAVRMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTD 1286

Query: 90   PI---FRPRLVEALKGVP---CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
            PI   +   L+ A +GV       V+ G   T  +T  G ++  G    G+LG G+T   
Sbjct: 1287 PIPVGYFTSLIAA-EGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS 1345

Query: 144  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
              P  +    ++ ++  +A G  + LA+T  G V++FG+G    LG+G + DE  P  ++
Sbjct: 1346 LYPSRV----DLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVE 1401

Query: 204  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
                  I  V ++AG+ H  AL   G V TWG G  GALGHG   +  +P  +    ++ 
Sbjct: 1402 GLEEYSI--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNP 1459

Query: 264  AVQ-----------VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPRIL 311
             V+           V      T    + G +YG+G    G LG       D  VL P+ +
Sbjct: 1460 NVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519

Query: 312  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
                +  +  I+ G + + V + +G+LF +G
Sbjct: 1520 RLPTSSGIRGIACGTFTSAVCSTQGQLFMWG 1550



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 31/265 (11%)

Query: 1    MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-----------TQCVSFTRINFPS 48
            +QI  G  HT LI++   +++ G   CG LGHG E            T  ++   + F  
Sbjct: 1247 VQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF-- 1304

Query: 49   AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGVPCKQ 107
               VV VS    H   V  +G ++  G   +   G  +T   ++  R+ +  +  V C  
Sbjct: 1305 -GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRNIAAVAC-- 1361

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
               G   T  LT +G V   G+   G+LG+G   D   P  +  LEE  S+V IAAG  +
Sbjct: 1362 ---GREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEY-SIVAIAAGECH 1417

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA---------IQTFRRKGIHVVRVSAG 218
              A++ +G V ++G GS+  LGHG + + L P           ++T       V  V+ G
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACG 1477

Query: 219  DEHVVALDSSGYVYTWGKGYCGALG 243
              H +A  + G +Y WG    G LG
Sbjct: 1478 SYHTLAATNDGVLYGWGDAAAGQLG 1502



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 211  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA------ 264
             VV+++ G  H   +    ++YT+G G CG LGHG E D T P P+    S +A      
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304

Query: 265  ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               V V   +  T V+   G +YGFGW   G LG  + G S   L P  +D LR  +++ 
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS---LYPSRVD-LR--NIAA 1358

Query: 322  ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            ++ G  HT+ +T +GR+F FG     +LG+
Sbjct: 1359 VACGREHTLALTSKGRVFAFGAGFGGRLGN 1388



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 15/214 (7%)

Query: 158  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIH-- 211
            VVQIA G  +   +T +  +Y+FG G    LGHG + D   P  +  F      +G+   
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 212  -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
             VV VS G EH + +  +G +Y +G G  G LG G+      P  +     ++A   C R
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD--LRNIAAVACGR 1363

Query: 271  KRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
            +  T  L   G V+ FG  GF G LG  +   +D+ L P +++ L  + +  I+ G  H+
Sbjct: 1364 EH-TLALTSKGRVFAFG-AGFGGRLG--NGSETDEEL-PFLVEGLEEYSIVAIAAGECHS 1418

Query: 330  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
              ++  G +  +G      LGH T   CL PT +
Sbjct: 1419 CALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLV 1452



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 27/265 (10%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + ++ GR HT++++ N  ++  G    G LG G ET   +  +R++     ++  V+   
Sbjct: 1308 VDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTG-ETGSSLYPSRVDL---RNIAAVACGR 1363

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +   G+VF  G       G+  +T+  +  P LVE L+      + AG   +  L
Sbjct: 1364 EHTLALTSKGRVFAFGAGFGGRLGNGSETDEEL--PFLVEGLEEYSIVAIAAGECHSCAL 1421

Query: 119  TIRGHVHTCGSNTHGQLGHG--DTLDRPT--------PKSIAPLEEVGSVVQIAAGPSYM 168
            +  G V T G  + G LGHG  D    PT        P     + ++  V  +A G  + 
Sbjct: 1422 SRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHT 1481

Query: 169  LAVTGNGVVYSFGSGSNFCLG--HGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            LA T +GV+Y +G  +   LG  H    D   L P+ I+     GI    ++ G      
Sbjct: 1482 LAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIR--GIACGTFTSAV 1539

Query: 225  LDSSGYVYTWGKGYCGALGHGDEID 249
              + G ++ WG     A G+G  +D
Sbjct: 1540 CSTQGQLFMWGS---PAAGNGAPLD 1561


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 14/293 (4%)

Query: 65  VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           V ++G +F CG     C G     D N P   P+L+  +  V    +  G      LT  
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVM--VTTVAIHPGGRHAMALTAE 229

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V++ G    GQLGHG+TL    P  I  L+    V +IA G  + +AV  +G ++S+G
Sbjct: 230 GKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS-KEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            GSN  LGHG    +L P+ I +    G H++ V+ G+ + +A+ +   V++WG G  G 
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLN--GKHIMAVACGECYTIAV-AGDDVWSWGLGGNGE 345

Query: 242 LGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG+G E+    +P  + +L       V      +F +   G V+ +G      LG  +  
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEK 405

Query: 301 VSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
           V   +++PR I   L+   + ++   L+H + + + G+++ +G  E   +G+D
Sbjct: 406 V---IVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGND 455



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 12/314 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           V+ S ++ +    ++  +V+  G   +      + N     P   + L+ +    +  G 
Sbjct: 109 VEKSRTDPYKEMRVEPSEVYVWGSKRNLLLAADEKNP--LEPDKSKLLENLDPSDIACGY 166

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 171
           +    ++  G +  CG    G LG G+  D   P+ I  L  V  + V I  G  + +A+
Sbjct: 167 DSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMAL 226

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T  G VYS+G G    LGHG     L P  I   + K   V +++ G  H +A+ S G +
Sbjct: 227 TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSK--EVTKIACGAMHSIAVLSDGKI 284

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           ++WG G  GALGHG+ + + LP+ + SL   H+    C       V  D   V+ +G  G
Sbjct: 285 FSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD--DVWSWGLGG 342

Query: 291 FGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            G LG+   GV       P  +++L    ++ ++ G   +  V+  G+++ +G  +R +L
Sbjct: 343 NGELGY---GVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRL 399

Query: 350 GHDTLRGCLEPTEI 363
           G    +  ++P EI
Sbjct: 400 GLGNEKVIVKPREI 413



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 12/246 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           GR+   L +   V+S G    G LGHG  T   +  T I+   +  V +++    H+  V
Sbjct: 220 GRHAMALTAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 278

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           L  G++F+ GD S+   GH + N     P+ + +L G     V  G  +T  + + G  V
Sbjct: 279 LSDGKIFSWGDGSNGALGHGN-NLAQLLPKKIMSLNGKHIMAVACGECYT--IAVAGDDV 335

Query: 125 HTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            + G   +G+LG+G  ++ P+   P  I  L   G +  +A G +   AV+ NG V+++G
Sbjct: 336 WSWGLGGNGELGYG--VEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWG 392

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG  F LG G +   ++PR IQ    KG  + RV A   H +A+D +G VY WG    G 
Sbjct: 393 SGDRFRLGLGNEKVIVKPREIQG-DLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGP 451

Query: 242 LGHGDE 247
           +G+ ++
Sbjct: 452 VGNDED 457



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 198 QP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
           QP  R  +   ++GI V + S  D +         VY WG      L   DE +   P+ 
Sbjct: 93  QPSIRLKEELLKRGIDVEK-SRTDPYKEMRVEPSEVYVWGSKR-NLLLAADEKNPLEPDK 150

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
              L++     +       FV+   G ++  G    G LG    G  D V  PR +  L 
Sbjct: 151 SKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGL---GNCDDVNVPRQIPQLL 207

Query: 316 AHHVSQIST--GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 373
              V+ ++   G  H + +T  G+++ +G  +R QLGH    G L+PT I   + +E T 
Sbjct: 208 PVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTK 267

Query: 374 LA 375
           +A
Sbjct: 268 IA 269



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 3/198 (1%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G  H++ ++S+  +FS G    G LGHG    Q +   +I   +  H++ V+  E 
Sbjct: 267 KIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLP-KKIMSLNGKHIMAVACGEC 325

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +    +    V++ G   +   G+       + P  +EAL       V  G   +  ++ 
Sbjct: 326 YT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSA 384

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   GS    +LG G+      P+ I    +   + ++ A   + LA+  NG VY +
Sbjct: 385 NGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIW 444

Query: 181 GSGSNFCLGHGEQHDELQ 198
           GS     +G+ E   + Q
Sbjct: 445 GSQEIGPVGNDEDAKQQQ 462



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)

Query: 1   MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           M +  G  +T+ ++   V+S G    G LG+G E       T+I       +  V+    
Sbjct: 318 MAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYA 377

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLT 119
            +  V  +G+V+  G    F  G     + I +PR ++  LKG   K+V A L     + 
Sbjct: 378 TSFAVSANGKVWAWGSGDRFRLG-LGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAID 436

Query: 120 IRGHVHTCGSNTHGQLGHGD 139
             G V+  GS   G +G+ +
Sbjct: 437 ENGQVYIWGSQEIGPVGNDE 456


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 147/324 (45%), Gaps = 32/324 (9%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           V+    H   +   G V+  G N     G    TNRP+  P  V  L G+  + V A  +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV--PVQVGGLSGI--RAVAASSD 200

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  +   G V   G N+ GQLG G T DR TP  +A L    S+ ++AAG  Y LAV G
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLS---SIKRVAAGDGYSLAVHG 257

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA------GDEHVVALD 226
           +G V+++G  S+  LG G   D L P      R KG+  VV VSA      G  HV+A+ 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRLTPG-----RVKGLSEVVEVSAAKYSLLGSAHVLAVR 312

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-------CARKRKTFVLVD 279
             G V+ WG    G LG G   D+  P  +S L    A+ V        +    +  +  
Sbjct: 313 GDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRG 372

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+V+ +G    G LG    G +    RP  +++L    ++ +S    H + + D G ++
Sbjct: 373 DGTVWAWGSNSTGQLG---DGTTISRSRPAQVNALSG--ITAVSASSDHALAMRDDGTVW 427

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G N   +LG +T    L P ++
Sbjct: 428 SWGKNTNGKLGDETTAHRLIPVQV 451



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 167/407 (41%), Gaps = 72/407 (17%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           + G Y   +  + +V++ GS+  G LG G   ++     ++N  S   +  VSAS +HA 
Sbjct: 362 SNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRS-RPAQVNALSG--ITAVSASSDHAL 418

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------------ 111
            +   G V++ G N++   G   T   +  P  V  L GV  + V AG            
Sbjct: 419 AMRDDGTVWSWGKNTNGKLGDETTAHRLI-PVQVHGLSGV--RSVAAGESHSVSVREDGK 475

Query: 112 --------------------------LNFTGFLTIRGH------------VHTCGSNTHG 133
                                     +  T    I  H            +   GS++ G
Sbjct: 476 AWAWGYRGMGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLG 535

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            LG G T   P P SI  L++V +V   AAG  Y LAV  NG ++++GS S   LG G  
Sbjct: 536 DLGDGSTGAHPVPSSI--LDDVKAV---AAGNDYSLAVRNNGSLWAWGSNSIGQLGDGST 590

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            + L P  +        +VV  +A     +AL S G V+ WG    G LG G  I+++ P
Sbjct: 591 TNRLTPVPVNGLE----NVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRSTP 646

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
            P+  L  H+ V V      +  L + G+V+ +G    G LG    G +    +P  +  
Sbjct: 647 GPVGGLV-HI-VGVATSGGHSLALRNDGTVWAWGGNHDGQLG---DGTTTNQPKPVQVSG 701

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           L    V  ++  +  + VV D G ++ +GDN   QLG  T    L P
Sbjct: 702 LSG--VKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTP 746



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 35/369 (9%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            +  G  H++ +  +   ++ G    G+LG G      +SF  +         Q+++  N
Sbjct: 459 SVAAGESHSVSVREDGKAWAWGYRGMGLLGDG---AMFLSFVPVQTMGLTATAQIASHGN 515

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            +  V +   ++  G +S    G   T   P+    L +       K V AG +++  + 
Sbjct: 516 RSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDD------VKAVAAGNDYSLAVR 569

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   GSN+ GQLG G T +R TP  +  LE V   V  AA  S  LA+  +G V++
Sbjct: 570 NNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLENV---VGAAASFSVSLALRSDGTVWA 626

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S   LG G   +   P  +       +H+V V+    H +AL + G V+ WG  + 
Sbjct: 627 WGLNSVGQLGDGSTINRSTPGPVGGL----VHIVGVATSGGHSLALRNDGTVWAWGGNHD 682

Query: 240 GALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G LG G   ++  P+P     LS +K+  A  V +   +     D G+V+ +G    G L
Sbjct: 683 GQLGDGTTTNQ--PKPVQVSGLSGVKAVAAAIVSSAVVR-----DNGTVWAWGDNYSGQL 735

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G +   L P ++  L    V  +++G +H + + + G ++ +GDN  +QLG  T 
Sbjct: 736 G---DGTTTDRLTPVLVSGLSG--VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTR 790

Query: 355 RGCLEPTEI 363
                P ++
Sbjct: 791 TQRSTPVQV 799



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 31/303 (10%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H+L +  + +V++ G +  G LG G   T     T +     + + +V+A + ++  V  
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDG---TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHG 257

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 123
            G V+  G NSS   G   T   +  P  V+ L  V   +V+A     L     L +RG 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRL-TPGRVKGLSEV--VEVSAAKYSLLGSAHVLAVRGD 314

Query: 124 --VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP------SYMLAVTGNG 175
             V   G+N  GQLG G T DR TP  ++ L+ V ++    + P      SY LAV G+G
Sbjct: 315 GTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDG 374

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++GS S   LG G      +P  +         +  VSA  +H +A+   G V++WG
Sbjct: 375 TVWAWGSNSTGQLGDGTTISRSRPAQVNALS----GITAVSASSDHALAMRDDGTVWSWG 430

Query: 236 KGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           K   G LG      + +P     LS ++S     V A +  +  + + G  + +G+ G G
Sbjct: 431 KNTNGKLGDETTAHRLIPVQVHGLSGVRS-----VAAGESHSVSVREDGKAWAWGYRGMG 485

Query: 293 SLG 295
            LG
Sbjct: 486 LLG 488



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 17/246 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S+ +V++ G +  G LG G    +    T        H+V V+ S  H+  +   G V
Sbjct: 618 LRSDGTVWAWGLNSVGQLGDGSTINRS---TPGPVGGLVHIVGVATSGGHSLALRNDGTV 674

Query: 72  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +  G N     G    TN+P  +P  V  L GV  K V A +  +  +   G V   G N
Sbjct: 675 WAWGGNHDGQLGDGTTTNQP--KPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDN 730

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             GQLG G T DR TP  ++ L  V +   +A+G  + LA+  +G V+++G      LG 
Sbjct: 731 YSGQLGDGTTTDRLTPVLVSGLSGVKA---LASGNHHFLALRNDGTVWAWGDNYYSQLGD 787

Query: 191 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           G +     P  +     +G+  V+ ++AG+ H +A+   G V+TWG    G LG+G    
Sbjct: 788 GTRTQRSTPVQV-----RGLSDVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 250 KTLPEP 255
             LP P
Sbjct: 843 SALPVP 848



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 163/411 (39%), Gaps = 68/411 (16%)

Query: 6   GRYHTLLI-SNSSVFSCGSSLCGVLGHGPET-----TQCVSFTRINFPSAAHVVQVSASE 59
           G  H L +  + +V++ G++  G LG G  T      Q      +   +  +   +S S 
Sbjct: 304 GSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSN 363

Query: 60  NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
              +  ++  G V+  G NS+   G   T     RP  V AL G+    V+A  +    +
Sbjct: 364 GSYSLAVRGDGTVWAWGSNSTGQLGD-GTTISRSRPAQVNALSGITA--VSASSDHALAM 420

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V + G NT+G+LG   T  R  P  +  L  V SV   AAG S+ ++V  +G  +
Sbjct: 421 RDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSV---AAGESHSVSVREDGKAW 477

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTF--------------------------------- 205
           ++G      LG G       P  +QT                                  
Sbjct: 478 AWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLG 535

Query: 206 ----RRKGIH---------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                  G H         V  V+AG+++ +A+ ++G ++ WG    G LG G   ++  
Sbjct: 536 DLGDGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLT 595

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P P++ L++   V   A    +  L   G+V+ +G    G LG    G +     P  + 
Sbjct: 596 PVPVNGLEN--VVGAAASFSVSLALRSDGTVWAWGLNSVGQLG---DGSTINRSTPGPVG 650

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L   H+  ++T   H++ + + G ++ +G N   QLG  T     +P ++
Sbjct: 651 GLV--HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQV 699



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 18/295 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  ++L + +N S+++ GS+  G LG G  T +    T +      +VV  +AS + 
Sbjct: 558 VAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNR---LTPVPVNGLENVVGAAASFSV 614

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  +   G V+  G NS    G   T NR    P  V  L  +     + G +    L  
Sbjct: 615 SLALRSDGTVWAWGLNSVGQLGDGSTINRSTPGP--VGGLVHIVGVATSGGHSLA--LRN 670

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG G T ++P P  ++ L  V +V            V  NG V+++
Sbjct: 671 DGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIV---SSAVVRDNGTVWAW 727

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   +  LG G   D L P  +         V  +++G+ H +AL + G V+ WG  Y  
Sbjct: 728 GDNYSGQLGDGTTTDRLTPVLVSGLS----GVKALASGNHHFLALRNDGTVWAWGDNYYS 783

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            LG G    ++ P  +  L       + A +  +  +   G+V+ +G    G LG
Sbjct: 784 QLGDGTRTQRSTPVQVRGLSD--VKLIAAGENHSMAVRKDGTVWTWGLNTSGQLG 836


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 111/220 (50%), Gaps = 6/220 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G N  GQLG GD ++R  P  I+ L +   V  +AAG  +   ++  G ++SFG G
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VAAGSQHSFVLSKFGELFSFGCG 218

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
           +   LGHG +     PR I T    G H+V V+AG  H  A+DS G +YTWG    G LG
Sbjct: 219 TFGRLGHGNELPSFNPRPISTLV--GKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLG 276

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            G     TLP     L+    V+V   K  T VL   G VY FG+   G LG      +D
Sbjct: 277 LGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGI--GSYTD 334

Query: 304 KVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            +   RI LD  +   +  I+ G YH +++T +G ++ FG
Sbjct: 335 SIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFG 374



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 32/375 (8%)

Query: 3   ITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           I  G  H L  L ++++V S G +  G LG G +  +C   T I+  S +  V V+A   
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHP-TPISGLSQSIPVFVAAGSQ 201

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + G++F+ G  +    GH +   P F PR +  L G     V AGL  +  +  
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNE-LPSFNPRPISTLVGKHIVSVAAGLMHSAAVDS 260

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           +G ++T G N +GQLG G       P     LE   ++V++  G ++ L +  NG VYSF
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 181 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
             G N C  LG G   D ++P  I    ++   ++ ++AG  HV+ L   G VY++G   
Sbjct: 320 --GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYIS 377

Query: 239 CGALGHGDEI-DKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            GALG GD +  ++ P+  P S         + + K           +YG     + S  
Sbjct: 378 DGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKE----------IYG----EYNSDS 423

Query: 296 FPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-- 351
             D   ++  L P++++  +       +I+ G +H+ ++T  GRL+ FG  +  +LG+  
Sbjct: 424 ENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNC 483

Query: 352 --DTLRGCLEPTEIF 364
             D    C+   EI+
Sbjct: 484 QEDQDMPCIVNKEIW 498



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 202 IQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           + T  ++G+ V  ++ GD H +A L +   V +WG    G LG GD++++  P P+S L 
Sbjct: 130 LPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLS 189

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             + V V A  + +FVL   G ++ FG   FG LG    G       PR + +L   H+ 
Sbjct: 190 QSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLG---HGNELPSFNPRPISTLVGKHIV 246

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
            ++ GL H+  V  +G L+ +G N   QLG  T++    P +
Sbjct: 247 SVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK 288



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 6/215 (2%)

Query: 158 VVQIAAGPSYMLAVTGN-GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           V  IA G S+ LAV  N   V S+G      LG G+Q +   P  I    +     V V+
Sbjct: 140 VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQS--IPVFVA 197

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG +H   L   G ++++G G  G LGHG+E+    P P+S+L     V V A    +  
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           +   G++Y +GW  +G LG    G   K   P     L   ++ ++  G  HT+V+   G
Sbjct: 258 VDSQGALYTWGWNRYGQLGL---GTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNG 314

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
            ++ FG N   QLG  +    ++P  I +   + D
Sbjct: 315 HVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND 349



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAHVVQVSA 57
           +++  G+ HTL++  N  V+S G ++CG LG G   T  +   RI+        ++ ++A
Sbjct: 298 VKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIG-SYTDSIKPNRIDLDLKQNDEIIDIAA 356

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FT 115
              H   + + G V++ G  S    G  D      RP+L+      P        N    
Sbjct: 357 GYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLM------PFSHFNHEFNDSID 410

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGN 174
            +  I G  +   S++   + + +   +  PK +    E+G V V+IAAG  +   +T +
Sbjct: 411 SYKEIYGEYN---SDSENDINNNNA--KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSS 465

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQP 199
           G +Y+FG G NF LG+  Q D+  P
Sbjct: 466 GRLYTFGLGDNFRLGNNCQEDQDMP 490


>gi|387018578|gb|AFJ51407.1| Serine/threonine-protein kinase Nek9-like [Crotalus adamanteus]
          Length = 963

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 348 PQKLDVIKNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 407

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR I  F
Sbjct: 408 HVEKLQG-KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFF 466

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VYTWG G  G LG   E D ++P+ +   K+   V
Sbjct: 467 SSNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIV 524

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L   G V   G   F  LG      G+ +      I           L 
Sbjct: 525 SVQCGSDGTFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLS 584

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 585 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 619



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 33/281 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ I++    F+ GS   G +G      ++ +   +INF S+  V QVS  +
Sbjct: 419 QVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFFSSNPVEQVSCGD 478

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH A + ++ +V+T G      CG       D+      P+ VE  K      V  G + 
Sbjct: 479 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDG 532

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 162
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 533 TFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIA 592

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 593 PGKTHTAAIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGDEFT 651

Query: 223 VALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL 256
           +A     +++ WG G  G L        H  +I  + P P+
Sbjct: 652 IAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPI 692



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 355 KNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 414

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G  + FG   +G +G  D+    +VL PR ++   ++ V Q
Sbjct: 415 KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGI-DKAFGSEVLEPRQINFFSSNPVEQ 473

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 474 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQK 519


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 175
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 51  YITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 109

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  SG VY 
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDSGEVYA 166

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 167 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 226

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  L +L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 227 QLGLGNNG---NQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTG 283

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I  ++
Sbjct: 284 NKSNQLSPVQIMTEK 298



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      + ++  V++ G +    LG G   +  V   +++  S   VV +S  S  H 
Sbjct: 44  TSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP-KKVDILSGRKVVSLSYGSGPHI 102

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIR 121
               + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDS 161

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G
Sbjct: 162 GEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG 221

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              N  LG G   ++L P  +     +G+ V ++ +G  H +AL   G +Y WG    G 
Sbjct: 222 YNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279

Query: 242 LGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 280 LGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 326


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 168/365 (46%), Gaps = 22/365 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L++ S+ +V+S G ++ G LG G    +  S  ++++ S      VS+ +
Sbjct: 337 VTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRS-SAVKVSWLSLGRA-DVSSGQ 394

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-QVTAGLNFTGFL 118
            H+  +  +G V+  GDN S   G+           LV A  G+     V+AG   T  L
Sbjct: 395 LHSVVLDSNGAVWAWGDNYSGQLGN-----GTGLDSLVAAPVGLGGSVAVSAGFKHTLVL 449

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
                V   G N HGQLG G   DR  P  +A L  V +V   +AG  + LA+  NG V+
Sbjct: 450 KADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSGVSAV---SAGSYHSLALRSNGTVW 506

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LG G   D LQP  +Q     G  VV V+AGD H +AL S G V+ WG  +
Sbjct: 507 AWGFNRYGQLGDGTNTDRLQP--VQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWGYNF 562

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G +G G    + LP  +  +     V V A    +  L   G+V+ +G+ G G LG   
Sbjct: 563 DGQIGDGSYSWRFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDG- 619

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              S  + +P  +       V  + +G YH++ +   G ++ +G N   QLG  +L    
Sbjct: 620 ---STAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRS 676

Query: 359 EPTEI 363
            P  +
Sbjct: 677 TPVRV 681



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G Y++L L S+ +V++ G +  G LG G  T + V    +N    + V+ +SA  
Sbjct: 189 IAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL---SGVMNLSAGS 245

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G V+  G N+    G   T    F+P  V  L  V    + AG   +  + 
Sbjct: 246 FHTVALRSDGSVWAWGFNAYGQLGD-GTTTSRFQPVQV-GLSDVLT--LVAGNYHSLAVR 301

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N + QLG G T     P        +   V + AG  + L +  +G V+S
Sbjct: 302 SDGAVWAWGDNRYRQLGDGTTTSSRVPVQ----SGLSGGVTLVAGYKHSLVLRSDGTVWS 357

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVYTWGKG 237
           +G      LG G       PR+    +   + + R  VS+G  H V LDS+G V+ WG  
Sbjct: 358 WGDNVFGQLGDGT----FNPRS-SAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDN 412

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           Y G LG+G  +D  +  P+    S   V V A  + T VL    +V+ +G    G LG  
Sbjct: 413 YSGQLGNGTGLDSLVAAPVGLGGS---VAVSAGFKHTLVLKADTTVWAWGVNEHGQLG-- 467

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           D  ++D+  RP  +  L    VS +S G YH++ +   G ++ +G N   QLG  T    
Sbjct: 468 DGTLTDRT-RPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDR 524

Query: 358 LEPTEI 363
           L+P ++
Sbjct: 525 LQPVQV 530



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N  GQLG G  +D PTP  +  L     VV +A+G  + L ++ +G V+++G
Sbjct: 55  GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS---GVVSVASGDYHSLGLSSDGTVWAWG 111

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             +   LG+G       P  +Q        VV + +G  H +AL S G V+ WG      
Sbjct: 112 DNTAGQLGNGTASASPVPVRVQNLS----GVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG+       LP  +  L   +AV   A    +  L   G+V+ +G   +G LG  D   
Sbjct: 168 LGNVGATRSNLPVQVPGLSGVIAV--VAGGYYSLALRSDGTVWAWGDNRYGQLG--DGTT 223

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
           + + +  ++L+      V  +S G +HTV +   G ++ +G N   QLG  T     +P 
Sbjct: 224 TQRAVPVQVLN---LSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPV 280

Query: 362 EIFIQEM 368
           ++ + ++
Sbjct: 281 QVGLSDV 287



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 156/358 (43%), Gaps = 36/358 (10%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 58
           + +  G YH+L + S+ +V++ G +    LG G  T+     +R+   S  +  V + A 
Sbjct: 288 LTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS-----SRVPVQSGLSGGVTLVAG 342

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCKQVTAGLNF 114
             H+  +   G V++ GDN     G        F PR   A+K     +    V++G   
Sbjct: 343 YKHSLVLRSDGTVWSWGDNVFGQLGD-----GTFNPR-SSAVKVSWLSLGRADVSSGQLH 396

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  L   G V   G N  GQLG+G  LD      +A    +G  V ++AG  + L +  +
Sbjct: 397 SVVLDSNGAVWAWGDNYSGQLGNGTGLD----SLVAAPVGLGGSVAVSAGFKHTLVLKAD 452

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             V+++G   +  LG G   D  +P  +Q     G+  V  SAG  H +AL S+G V+ W
Sbjct: 453 TTVWAWGVNEHGQLGDGTLTDRTRP--VQVAGLSGVSAV--SAGSYHSLALRSNGTVWAW 508

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LG G   D+  P  ++ L     V V A    +  L   G+V+ +G+   G +
Sbjct: 509 GFNRYGQLGDGTNTDRLQPVQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQI 566

Query: 295 GFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           G       D     R L    +    V  +S G YH++ +   G ++ +G N   QLG
Sbjct: 567 G-------DGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG 617



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 146/346 (42%), Gaps = 25/346 (7%)

Query: 21  CGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
            G+ L    G GP   +  +  R+  P    +   +++  + H+  V   G V+  G N 
Sbjct: 6   LGAWLVAGCGPGPGVEEP-ALGRVRSPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNR 64

Query: 79  SFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
               G     + P   P  V  L GV    V +G   +  L+  G V   G NT GQLG+
Sbjct: 65  QGQLGDGTLVDSPT--PVRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGN 120

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE 196
           G     P P  +   + +  VV + +G S+ LA+  +G V+++G      LG+ G     
Sbjct: 121 GTASASPVPVRV---QNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSN 177

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L    +Q     G  V+ V AG  + +AL S G V+ WG    G LG G    + +P  +
Sbjct: 178 LP---VQVPGLSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV 232

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
            +L     + + A    T  L   GSV+ +G+  +G LG    G +    +P     +  
Sbjct: 233 LNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLG---DGTTTSRFQPV---QVGL 284

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             V  +  G YH++ V   G ++ +GDN   QLG  T      P +
Sbjct: 285 SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ 330



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G YH+L L SN +V++ G +  G LG G  T +      +     + VV V+A ++H
Sbjct: 489 VSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDR---LQPVQVAGLSGVVAVAAGDSH 545

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +   G V+  G N     G    +   +R   V+ +       V+AG   +  L   
Sbjct: 546 SLALRSDGTVWAWGYNFDGQIGDGSYS---WRFLPVQVVGLSGVVSVSAGGYHSLALRSD 602

Query: 122 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G V T G N  GQLG G T +++P P  +A L     VV + +G  + L +  +G V+++
Sbjct: 603 GTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLS---GVVSLGSGNYHSLGLRSDGTVWAW 659

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G   +  LG G   +   P      R  G+  VV V AGD H +A  S G V+ WG    
Sbjct: 660 GFNFDGQLGDGSLLNRSTP-----VRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGE 714

Query: 240 GALGHGDEIDKTLP 253
           G LG G   D  +P
Sbjct: 715 GQLGDGTRNDTLVP 728



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 140/343 (40%), Gaps = 62/343 (18%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            +++G+ H++++ SN +V++ G +  G LG+G      V+   +    +   V VSA   
Sbjct: 389 DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA-APVGLGGS---VAVSAGFK 444

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H   +     V+  G N     G    T+R   RP  V  L GV    V+AG   +  L 
Sbjct: 445 HTLVLKADTTVWAWGVNEHGQLGDGTLTDRT--RPVQVAGLSGVSA--VSAGSYHSLALR 500

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N +GQLG G   DR  P  +A L     VV +AAG S+ LA+  +G V++
Sbjct: 501 SNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLS---GVVAVAAGDSHSLALRSDGTVWA 557

Query: 180 FGSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIH------ 211
           +G   +  +G G       P                      R+  T    G +      
Sbjct: 558 WGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG 617

Query: 212 -------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                              VV + +G+ H + L S G V+ WG  + G LG G  ++++ 
Sbjct: 618 DGSTAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRST 677

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           P  +S L     V V A    +      G+V+ +G+ G G LG
Sbjct: 678 PVRVSGLSG--VVSVVAGDYHSLARRSDGTVWAWGYNGEGQLG 718


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 161/364 (44%), Gaps = 21/364 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H L L+S+ +V + G +  G LG G  T +      +       VV ++A E
Sbjct: 148 VAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIAAGE 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  VL  G V   G+N+    G   T +    P LV +L GV    + AG N +  + 
Sbjct: 205 NHSLAVLADGTVRAWGNNTYGRLGDGTTTQRT-SPVLVSSLTGVTA--IAAGANHSLAVL 261

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  G+LG G T  R TP ++  L     V +I+AG  + LA+  +G   +
Sbjct: 262 ADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLT---GVTEISAGGGHSLALLADGTARA 318

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GS  +  LG G   +   P  + +       V  +SAG  H +AL + G    WG    
Sbjct: 319 WGSNVSGQLGDGTVSNRTSPVLVSSL----TGVTALSAGGNHSLALLADGTARAWGANVS 374

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    +TLP  L  L    A+   A    +  ++  G+V  +G   +G LG    
Sbjct: 375 GQLGDGTTTQRTLPVGLPGLTGVAAL--AAGGYHSLAVLANGTVRAWGHNTYGQLG---D 429

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G + +   P ++ +L    V  ++ G  H++ +   G +  +G+N   QLG  T      
Sbjct: 430 GSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487

Query: 360 PTEI 363
           P ++
Sbjct: 488 PVQV 491



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 29/355 (8%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G YH+L +++N +V + G +  G LG G    +      +  P+   VV ++A  +H
Sbjct: 400 LAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAP---VVVPALTGVVSLTAGYDH 456

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRL--VEALKGVPCKQVTAGLNFTG 116
           +  +L  G V   G+N+S   G   TN+   P+    L  V AL G       A      
Sbjct: 457 SLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALA------ 510

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            L   G V   G N +GQLG G T +R TP +++ L  V   V IAAG  Y LA+  NG 
Sbjct: 511 -LLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTNV---VAIAAGGDYSLALQSNGT 566

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V S+G G    LG         P+A+        +VV ++AG  HV+AL + G VY WG+
Sbjct: 567 VQSWGYGVYGPLGRDYDTYSPTPKAVPGV----TNVVAIAAGANHVLALRADGTVYAWGR 622

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G  + +  P  +  L +   V +      +  L   G+VY +G+     LG 
Sbjct: 623 NDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNYARQLG- 679

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            D   ++    P  +  L   +V  ++ G   ++ +   G +  +GDN   +LG+
Sbjct: 680 -DGSTANYRQTPAPVPGLT--NVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGN 731



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 152/345 (44%), Gaps = 20/345 (5%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G Y   L+ + +V + G++  G LG G    +         P  + VV ++A  NHA  +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGA---VPGLSGVVAIAAGNNHALAL 160

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           L  G V   G N+    G   T +    P  V  L GV    + AG N +  +   G V 
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQR-RTPVAVLGLTGVVA--IAAGENHSLAVLADGTVR 217

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
             G+NT+G+LG G T  R +P  ++ L     V  IAAG ++ LAV  +G V ++G  ++
Sbjct: 218 AWGNNTYGRLGDGTTTQRTSPVLVSSLT---GVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG G       P A+         V  +SAG  H +AL + G    WG    G LG G
Sbjct: 275 GRLGDGTTTQRATPVAVPGL----TGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              ++T P  +SSL    A  + A    +  L+  G+   +G    G LG    G + + 
Sbjct: 331 TVSNRTSPVLVSSLTGVTA--LSAGGNHSLALLADGTARAWGANVSGQLG---DGTTTQR 385

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             P  L  L    V+ ++ G YH++ V   G +  +G N   QLG
Sbjct: 386 TLPVGLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLG 428



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 19/325 (5%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
             V++++ + H+      G V   GDN+S   G   T +    P  V  L G     V+A
Sbjct: 46  RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR-SSPTAVPGLAG--AVAVSA 102

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G  ++  L   G V   G+NT+GQLG G T  R +P ++  L     VV IAAG ++ LA
Sbjct: 103 GGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS---GVVAIAAGNNHALA 159

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  +G V ++G  +   LG G       P A+         VV ++AG+ H +A+ + G 
Sbjct: 160 LLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL----TGVVAIAAGENHSLAVLADGT 215

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           V  WG    G LG G    +T P  +SSL    A+   A      VL D G+V  +G+  
Sbjct: 216 VRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGA-NHSLAVLAD-GTVRAWGYNA 273

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG    G + +   P  +  L    V++IS G  H++ +   G    +G N   QLG
Sbjct: 274 SGRLG---DGTTTQRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLG 328

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGLA 375
             T+     P  + +  +   T L+
Sbjct: 329 DGTVSNRTSP--VLVSSLTGVTALS 351



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 22/365 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H+L ++++ +V + G++  G LG G  TTQ  S   ++  S   V  ++A  
Sbjct: 198 VAIAAGENHSLAVLADGTVRAWGNNTYGRLGDG-TTTQRTSPVLVS--SLTGVTAIAAGA 254

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  VL  G V   G N+S   G   T +    P  V  L GV   +++AG   +  L 
Sbjct: 255 NHSLAVLADGTVRAWGYNASGRLGDGTTTQRAT-PVAVPGLTGV--TEISAGGGHSLALL 311

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G     GSN  GQLG G   +R +P  ++ L     V  ++AG ++ LA+  +G   +
Sbjct: 312 ADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLT---GVTALSAGGNHSLALLADGTARA 368

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+  +  LG G       P  +         V  ++AG  H +A+ ++G V  WG    
Sbjct: 369 WGANVSGQLGDGTTTQRTLPVGLPGL----TGVAALAAGGYHSLAVLANGTVRAWGHNTY 424

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G    +T P  + +L     V + A    +  L+  G+V  +G    G LG    
Sbjct: 425 GQLGDGSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLG---D 479

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTG-LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           G +++   P  +  L   +V  +S G LYH + +   G +  +G N   QLG  +     
Sbjct: 480 GTTNQRGTPVQVSGLT--NVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRW 537

Query: 359 EPTEI 363
            P  +
Sbjct: 538 TPVAV 542



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 17/252 (6%)

Query: 8   YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           YH L L+S+ +V + G ++ G LG G  + +   +T +      +VV ++A  +++  + 
Sbjct: 506 YHALALLSDGTVRAWGYNMNGQLGDGSTSNR---WTPVAVSGLTNVVAIAAGGDYSLALQ 562

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
            +G V + G       G RD +     P+ V  +  V    + AG N    L   G V+ 
Sbjct: 563 SNGTVQSWGYGVYGPLG-RDYDTYSPTPKAVPGVTNVVA--IAAGANHVLALRADGTVYA 619

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N  GQLG G T+ R TP  +  L  V   V IA G  + LA+  +G VY++G     
Sbjct: 620 WGRNDFGQLGDGTTVQRNTPVQVPGLTNV---VAIATGWDHSLALRADGTVYAWGYNYAR 676

Query: 187 CLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
            LG G   +  Q P  +        +VV V+AG    +AL SSG V+ WG    G LG+G
Sbjct: 677 QLGDGSTANYRQTPAPVPGL----TNVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGNG 732

Query: 246 DEIDKTLPEPLS 257
             +  T P P++
Sbjct: 733 STL--TPPAPVA 742



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H L L ++ +V++ G +  G LG G   T     T +  P   +VV ++   
Sbjct: 599 VAIAAGANHVLALRADGTVYAWGRNDFGQLGDG---TTVQRNTPVQVPGLTNVVAIATGW 655

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G V+  G N +   G   T      P  V  L  V    VTAG N +  L 
Sbjct: 656 DHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQSLALL 713

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
             G VH  G N+HG+LG+G TL  P P ++  L
Sbjct: 714 SSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 6/257 (2%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           Q   G   +  L   G V +CG+N+ GQLG         P  I  LE    +V ++ G  
Sbjct: 41  QAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE-TQDIVSVSCGKE 99

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + LA+   G V+S+GSGS+  LG  E +     P+ I         +++VS G  H +AL
Sbjct: 100 HSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL--SSFKIIQVSCGHYHSIAL 157

Query: 226 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
              G V++WGK   G LG G+ +  +  P+ + SL      QV A    +F L  +G+ Y
Sbjct: 158 AQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSY 217

Query: 285 GFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           G+G    G L    +  S +++ +P  +  L+   V+ IS G  HT V+T  G++F FG 
Sbjct: 218 GWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGS 277

Query: 344 NERAQLGHDTLRGCLEP 360
           N+  QLG   + G   P
Sbjct: 278 NDSGQLGRQLISGMKGP 294



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 144/300 (48%), Gaps = 20/300 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVT 109
           ++Q +  E H+  +L  G V++CG+NS   CG   R   +   RP  ++AL+      V+
Sbjct: 39  LLQAACGERHSLLLLSDGTVWSCGNNS---CGQLGRKRCQKHGRPAQIQALETQDIVSVS 95

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +   G V + GS + GQLG  +     + PK I  L     ++Q++ G  + 
Sbjct: 96  CGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSF-KIIQVSCGHYHS 154

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +A+  +G V+S+G  ++  LG GE    +  P+ +++    GI + +V+AG  H  AL  
Sbjct: 155 IALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSL--DGIPLAQVAAGGAHSFALSF 212

Query: 228 SGYVYTWGKGYCG--ALGHGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSV 283
           SG  Y WG+   G  AL    E  + + +P S   LK      +      T VL   G V
Sbjct: 213 SGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKV 272

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFG 342
           + FG    G LG   R +   +  P+++DS  A   SQI+ G YHT+  +   G++  FG
Sbjct: 273 FTFGSNDSGQLG---RQLISGMKGPQVVDS--AVSFSQIACGSYHTLAYSCTTGQVISFG 327



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 16/253 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 56
           +Q   G  H+LL+ S+ +V+SCG++ CG LG      +C    R   I       +V VS
Sbjct: 40  LQAACGERHSLLLLSDGTVWSCGNNSCGQLGR----KRCQKHGRPAQIQALETQDIVSVS 95

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
             + H+  + + G+VF+ G  S    G R+  +    P+ ++ L      QV+ G   + 
Sbjct: 96  CGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSI 155

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            L   G V + G N HGQLG G+ +  + +P+ +  L+ +  + Q+AAG ++  A++ +G
Sbjct: 156 ALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI-PLAQVAAGGAHSFALSFSG 214

Query: 176 VVYSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             Y +G   +G     G  E  +++ +P +I   +R  + V  +S GDEH   L   G V
Sbjct: 215 TSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKR--LQVTYISCGDEHTAVLTQDGKV 272

Query: 232 YTWGKGYCGALGH 244
           +T+G    G LG 
Sbjct: 273 FTFGSNDSGQLGR 285


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 277 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 335

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 336 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 394

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 452

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 453 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 512

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 513 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 569

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH ++    +PT
Sbjct: 570 YTWGMGANGRLGHGSVEDKKKPT 592



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 332 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 390

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 117
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 391 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 449

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 450 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 508

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 227
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 509 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 565

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 566 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 598



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 246 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 301

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 187
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 302 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 360

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 361 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 419

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 299
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 420 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 478

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRG 356
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+   D  + 
Sbjct: 479 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQP 538

Query: 357 CLEPTEIFIQEMEE 370
           C+   ++  + +EE
Sbjct: 539 CMVQDKLGNELVEE 552



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 20/344 (5%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 279 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 337

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 338 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 397

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 175
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 398 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 456

Query: 176 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 457 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 514

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 515 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 574

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG     V DK  +P ++D+L+  HV  IS G   T  +
Sbjct: 575 GANGRLGHG--SVEDKK-KPTLVDALKDRHVKSISCGSNFTTCI 615



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 288

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 289 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 348

Query: 284 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 349 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 406

Query: 342 GDNERAQLGHDTLRGCLEPTEI 363
           GD     LGH        P E+
Sbjct: 407 GDGTFGSLGHGDRESVAYPKEV 428


>gi|213983021|ref|NP_001135671.1| NIMA-related kinase 9 [Xenopus (Silurana) tropicalis]
 gi|197246344|gb|AAI68588.1| Unknown (protein for MGC:185428) [Xenopus (Silurana) tropicalis]
          Length = 924

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   SV Q++ G  + + ++  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFF 459

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVE--QVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRDLCIV 517

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 315
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 253
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           + +  L+     QV      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGV-NQSAGAEVLEPLLVDF 458

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 34/304 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ IS+   ++S GS   G LG       + +    ++F     V QVS  +
Sbjct: 412 QVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGD 471

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +H   + +S  V++ G      CG       D+   ++ P+ VE  + +    V  G + 
Sbjct: 472 SHIIALTRSKCVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRDLCIVNVCCGSDG 525

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           +A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 IAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 276 VLVD 279
           ++V+
Sbjct: 704 LIVE 707



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 24/333 (7%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           GS L G LGHG   +       +       V QVS   +    +   GQ+++ G +   C
Sbjct: 381 GSKLHGQLGHGDRASY-RQPKHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGC 439

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G ++     +  P LV+     P +QV+ G +    LT    V++ G   +G+LG    
Sbjct: 440 LGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSE 499

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE------QH 194
            D  +P+ +    ++  +V +  G      +T  G V + G   +  LG  +       H
Sbjct: 500 DDVYSPQKVEVQRDL-CIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558

Query: 195 DELQP----RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +  Q      ++   ++   + +R +S G  H  A+D  G + T+G   CG LG GD   
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YR 617

Query: 250 KTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PD---RGVSD 303
           K L   L    L     ++V      T        ++ +G  G G L   P+   +G   
Sbjct: 618 KHLGINLLGGPLGGKQVIRVSCGDEFTIAATADNHIFAWGNGGNGRLAMTPNERPQGSDI 677

Query: 304 KVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
               PR I  SL  HHV+ +S   +HT+++ ++
Sbjct: 678 CTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 156/355 (43%), Gaps = 29/355 (8%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 313 IAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG--VETIAAGDYH 370

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALKGVPC--KQVTAGLNF 114
              ++ SG V         C GH D  +        R   V A+ G+P     + AG   
Sbjct: 371 TCALMSSGGVR--------CWGHNDRGQLGDGTTTARSTPV-AVSGLPSGVTAIAAGRLH 421

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V   G N+ GQLG G   D  TP +++ L     V  IAAG  +  A+TG+
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLAS--GVETIAAGGWHTCALTGS 479

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+ +G  ++  LG G     + P A+         V  ++AG  H  AL  SG V+ W
Sbjct: 480 GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGGVHTCALTGSGGVWCW 536

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G  + G LG G   D++ P  +S L S +   + A    T  L  +G V+ +G   FG L
Sbjct: 537 GGNFAGQLGDGTTTDRSTPVAVSGLPSGV-TAIAAGDIHTCALTGSGGVWCWGGNDFGQL 595

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           G    G +     P  +  L +  V+ I+ GL +T  +T  G ++ +G N   QL
Sbjct: 596 G---DGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL 646



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 156/367 (42%), Gaps = 25/367 (6%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  L S+  V+  GS+  G LG G  TT+         PS   V  ++A   H
Sbjct: 109 IAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG--VTAIAAGGWH 166

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTG 116
                 SG V+  G N     G     D + P+       A+ G+P +   + AG   T 
Sbjct: 167 TCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPV-------AVSGLPSEVTAIAAGDAHTC 219

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
                G V   G N +GQLG G   D  TP +++ L     V  IAAG  +  A+TG+G 
Sbjct: 220 ARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGGVHTCALTGSGG 277

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V  +G+  +  LG+G       P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 278 VRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWGG 334

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            Y G LG G    ++ P  +S L S +   + A    T  L+ +G V  +G    G LG 
Sbjct: 335 NYSGQLGDGTTTARSTPVAVSGLPSGVET-IAAGDYHTCALMSSGGVRCWGHNDRGQLG- 392

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G +     P  +  L +  V+ I+ G  HT   T  G ++ +GDN   QLG  +   
Sbjct: 393 --DGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTD 449

Query: 357 CLEPTEI 363
              P  +
Sbjct: 450 SSTPVAV 456



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 154/354 (43%), Gaps = 19/354 (5%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ S    C G++  G LG+G    +         PS   V  ++A + H
Sbjct: 262 IAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGDYH 319

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGFLT 119
              +  SG V+  G N S   G         R   V A+ G+P   + + AG   T  L 
Sbjct: 320 TCALTGSGGVWCWGGNYS---GQLGDGTTTARSTPV-AVSGLPSGVETIAAGDYHTCALM 375

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A T +G V+ 
Sbjct: 376 SSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPS--GVTAIAAGRLHTCARTSSGGVWC 433

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S+  LG G   D   P A+         V  ++AG  H  AL  SG V+ WG+   
Sbjct: 434 WGDNSDGQLGDGSFTDSSTPVAVSGLASG---VETIAAGGWHTCALTGSGGVWCWGRNNS 490

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG G  I    P  +S L S +   + A    T  L  +G V+ +G    G LG  D 
Sbjct: 491 GQLGDGSTIYHITPVAVSGLPSGV-TAIAAGGVHTCALTGSGGVWCWGGNFAGQLG--DG 547

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
             +D+   P  +  L +  V+ I+ G  HT  +T  G ++ +G N+  QLG  T
Sbjct: 548 TTTDRS-TPVAVSGLPSG-VTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGT 599



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 159/401 (39%), Gaps = 69/401 (17%)

Query: 3   ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  L+S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 364 IAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPSG--VTAIAAGRLH 421

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
                 SG V+  GDNS    G     D++ P+    L   ++      + AG   T  L
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 476

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 477 TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGGVHTCALTGSGGVW 534

Query: 179 SFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            +G   NF   LG G   D   P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 535 CWGG--NFAGQLGDGTTTDRSTPVAVSGLPSG---VTAIAAGDIHTCALTGSGGVWCWGG 589

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL-- 294
              G LG G   +++ P  +S L S +   + A  R T  L  +G V+ +G+   G L  
Sbjct: 590 NDFGQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGLRYTCALTGSGGVWCWGYNLSGQLDD 648

Query: 295 ------------GFPD---------------------------------RGVSDKVLRPR 309
                       G P                                   G + K   P 
Sbjct: 649 GTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPV 708

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +  L +  V+ I+ G  HT  +   G ++ +G N+  QLG
Sbjct: 709 AVSGLPSG-VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLG 748



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 118/264 (44%), Gaps = 12/264 (4%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L+GV    + AG   T   T  G V   G N  G+LG G   D  TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS--GVT 107

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IAAG ++  A+T +G V+ +GS     LG G       P A+         V  ++AG 
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG---VTAIAAGG 164

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            H  A  SSG V+ WG  Y G LG G   D++ P  +S L S +   + A    T   + 
Sbjct: 165 WHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEV-TAIAAGDAHTCARMS 223

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           +G V+ +G   +G LG  D   +D    P  +  L +  V+ I+ G  HT  +T  G + 
Sbjct: 224 SGEVWCWGGNNYGQLG--DGSYTDSS-TPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVR 279

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G N   QLG+    G   P  +
Sbjct: 280 CWGANYSGQLGNGLTFGRSTPGAV 303



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 111/254 (43%), Gaps = 15/254 (5%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 517 IAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIAAGDIH 574

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 119
              +  SG V+  G N     G    TNR    P  V  L  GV    + AGL +T  LT
Sbjct: 575 TCALTGSGGVWCWGGNDFGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGLRYTCALT 630

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQL  G T  R TP +++ L     V  IAAG  Y  A T +G V  
Sbjct: 631 GSGGVWCWGYNLSGQLDDG-TTSRSTPVAVSGLPS--GVTAIAAGGWYTCARTSSGGVRC 687

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+  +  LG G       P A+         V  ++AG EH  AL SSG V+ WG+   
Sbjct: 688 WGANGSGQLGDGTTTKRSTPVAVSGLPSG---VTAIAAGGEHTCALMSSGGVWCWGRNDS 744

Query: 240 GALGHGDEIDKTLP 253
           G LG G  + +T P
Sbjct: 745 GQLGDGRPLYRTTP 758



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 13/218 (5%)

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTF 205
            S +PL+    V  IAAG  +  A T +G V+ +G G++F  LG G   D   P A+   
Sbjct: 47  SSFSPLQ---GVTAIAAGGGHTCARTSSGGVWCWG-GNDFGRLGDGSYTDSSTPVAVSGL 102

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
                 V  ++AG  H  AL SSG V+ WG  + G LG G    ++ P  +S L S +  
Sbjct: 103 PSG---VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGV-T 158

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            + A    T     +G V+ +G    G LG  D   +D+   P  +  L +  V+ I+ G
Sbjct: 159 AIAAGGWHTCARTSSGGVWCWGGNYRGQLG--DGTTTDRS-TPVAVSGLPS-EVTAIAAG 214

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             HT      G ++ +G N   QLG  +      P  +
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAV 252



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 3   ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++A   +
Sbjct: 568 IAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG--VTAIAAGLRY 625

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 120
              +  SG V+  G N S       T+R    P  V  L  GV    + AG  +T   T 
Sbjct: 626 TCALTGSGGVWCWGYNLSGQLDDGTTSRST--PVAVSGLPSGV--TAIAAGGWYTCARTS 681

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G+N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G V+ +
Sbjct: 682 SGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPS--GVTAIAAGGEHTCALMSSGGVWCW 739

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
           G   +  LG G       P  + T    G+++
Sbjct: 740 GRNDSGQLGDGRPLYRTTPVDVVTSASWGVYL 771


>gi|315506657|ref|YP_004085544.1| hyalin [Micromonospora sp. L5]
 gi|315413276|gb|ADU11393.1| Hyalin [Micromonospora sp. L5]
          Length = 1017

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 174/372 (46%), Gaps = 34/372 (9%)

Query: 3    ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +  G+ H+L +++  +V + G +L G LG+G   ++    T +     + ++ VS+ +  
Sbjct: 661  VAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSET---TAVPVSGLSGILAVSSGDAS 717

Query: 62   AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            +  + +SG V + G+N       G R  +R   RP  V+ L G   KQ+ AG +    L 
Sbjct: 718  SYALTRSGVVHSWGENLLGQLGNGSRLQSR---RPVQVDGLTG--AKQIAAGNDHVLALK 772

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-----YMLAVTGN 174
              G V   GSN  GQLG    L    P ++  L    SVVQ+AAG +     + +A+ G+
Sbjct: 773  SDGTVAAWGSNLAGQLGRTGVLSATKPAAVPGLT---SVVQVAAGGTPGLAGHSVALKGD 829

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            G V+++G G N  LG G+      P  +        +VV ++A   +  AL S G V+ W
Sbjct: 830  GTVWTWGHGLNGQLGLGDHRSTATPTQVPGLS----NVVLIAADGNNTYALKSDGTVWAW 885

Query: 235  GKGYCGALGHGDEI-DKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGF 291
            G G  G +G+ D    +T P     LK +++  V + A       +   G+V+G+G    
Sbjct: 886  GDGNHGQIGNPDATHSQTTP-----LKVNISGVVSIDAGSTTAMAVKGDGTVWGWGSNAS 940

Query: 292  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            G LG  DR        P     L       I++GL H++VV   G + G+G N   QLG+
Sbjct: 941  GQLG-DDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGNLLGQLGN 997

Query: 352  DTLRGCLEPTEI 363
             T +G   PT +
Sbjct: 998  GTRKGATTPTTV 1009



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 116/271 (42%), Gaps = 27/271 (9%)

Query: 2    QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS- 58
            QI  G  H L L S+ +V + GS+L G LG     T  +S T+    P    VVQV+A  
Sbjct: 760  QIAAGNDHVLALKSDGTVAAWGSNLAGQLGR----TGVLSATKPAAVPGLTSVVQVAAGG 815

Query: 59   ----ENHAAFVLQSGQVFTCGD--NSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 111
                  H+  +   G V+T G   N     G HR T  P   P L   +       + A 
Sbjct: 816  TPGLAGHSVALKGDGTVWTWGHGLNGQLGLGDHRSTATPTQVPGLSNVV------LIAAD 869

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLA 170
             N T  L   G V   G   HGQ+G+ D     T     PL+  +  VV I AG +  +A
Sbjct: 870  GNNTYALKSDGTVWAWGDGNHGQIGNPDA----THSQTTPLKVNISGVVSIDAGSTTAMA 925

Query: 171  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            V G+G V+ +GS ++  LG            ++     G     +++G  H + +++ G 
Sbjct: 926  VKGDGTVWGWGSNASGQLGDDRDCGLHCSTPVKASGLTGAG--WIASGLLHSLVVNTDGN 983

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
            V+ +G    G LG+G     T P  +S + +
Sbjct: 984  VHGYGGNLLGQLGNGTRKGATTPTTVSGVTA 1014



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 7/154 (4%)

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
           I+   V+AG  H +A++    V  WG    G LG+G    +T   P+S L   LAV   +
Sbjct: 656 IYAPPVAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSETTAVPVSGLSGILAVS--S 713

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               ++ L  +G V+ +G    G LG    G   +  RP  +D L      QI+ G  H 
Sbjct: 714 GDASSYALTRSGVVHSWGENLLGQLG---NGSRLQSRRPVQVDGLTG--AKQIAAGNDHV 768

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           + +   G +  +G N   QLG   +    +P  +
Sbjct: 769 LALKSDGTVAAWGSNLAGQLGRTGVLSATKPAAV 802



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 12   LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
            L S+ +V++ G    G +G+   T    +  ++N    + VV + A    A  V   G V
Sbjct: 876  LKSDGTVWAWGDGNHGQIGNPDATHSQTTPLKVNI---SGVVSIDAGSTTAMAVKGDGTV 932

Query: 72   FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
            +  G N+S   G  RD       P     L G     + +GL  +  +   G+VH  G N
Sbjct: 933  WGWGSNASGQLGDDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGN 990

Query: 131  THGQLGHGDTLDRPTPKSIAPLEEV 155
              GQLG+G      TP +++ +  V
Sbjct: 991  LLGQLGNGTRKGATTPTTVSGVTAV 1015


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 168
           A  N   ++T    V+  G N    LG GD+     PK +  L     + +   +GP ++
Sbjct: 29  ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           L VT +G +Y++G      LG+G  +  + P  + T   +G  V  VS G  H +AL   
Sbjct: 88  LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G V+ WG   CG +G G   ++  P  +S+ L++ + V +   +  +  + D G VYG+G
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG 206

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           + G G LG  + G     L P  L +L+   V QI++G  H++ +TD G L+ +G N   
Sbjct: 207 YNGNGQLGLGNNG---NQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYG 263

Query: 348 QLGHDTLRGCLEPTEIFIQE 367
           QLG       L P ++  ++
Sbjct: 264 QLGTGNKSNQLSPVQVMTEK 283



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 7/276 (2%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           +  V+  G +    LG G ++   ++  +++  S   ++ +S  S  H   V + G+++ 
Sbjct: 40  DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G N     G+  TN+ +  P LV   L+G    +V+ G + +  LT  G V   G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           GQ+G G T ++PTP+ ++   +   +V IA G +  +AVT NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
             ++L P   +    +G  V+++++G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 253 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           P  + + K  +  +  C     +     +G VY +G
Sbjct: 276 PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +++ G +H+L +++   VF+ G + CG +G G    Q       N      +V ++  + 
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQT 191

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +  V  +G+V+  G N +   G  +    +   RL+ AL+G    Q+ +G   +  LT 
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTD 250

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 178
            G ++  G+NT+GQLG G+  ++ +P  +  + E   +V+IAA  S     A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308

Query: 179 SFG 181
            +G
Sbjct: 309 MWG 311


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+V+ 
Sbjct: 49  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN  +    +   L      +V  G + T  LT  G V+  G N  G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG +Y +G   N  LG G  
Sbjct: 168 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 227

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +G+++V+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 228 GNQQTPCRIAAL--QGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 285

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            P+++ K  +  V  C     +     +G V  +G
Sbjct: 286 TPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 9/250 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 45  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 102

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G      LG+G  +  L P  + T       V  V+ G  H +AL + G VY W
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAW 161

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G +YG+G+   G 
Sbjct: 162 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQ 221

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG   
Sbjct: 222 LGLGNNGNQQTPCR---IAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGN 278

Query: 354 LRGCLEPTEI 363
                 PT I
Sbjct: 279 KSNQALPTPI 288



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 38  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 93

Query: 117 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                 T  G V+  G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 94  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALT 153

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G +Y
Sbjct: 154 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGEIY 212

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 213 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYG 272

Query: 293 SLG 295
            LG
Sbjct: 273 QLG 275


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 6/195 (3%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 216
           V Q+A G  + +A+T  G VY++G  S   LG G++   +  P+ +++    G+ +V+VS
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSL--SGMPLVQVS 176

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG +H  AL  SG V+ WG+  CG LG GD  D+  P  + SL       +   K  T +
Sbjct: 177 AGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAI 236

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L   G+V+ FG   FG LG      S   LRPR++  L    V++I+ G YHT+V+ +  
Sbjct: 237 LTKHGTVFTFGSGQFGQLG---HNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293

Query: 337 RLFGFGDNERAQLGH 351
           +++ FG N++ QLG 
Sbjct: 294 KIYSFGCNDQNQLGR 308



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V QV+    H   + + GQV+T G NS    G       I  P+ V +L G+P  QV+AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            + +  L++ G V   G N  GQLG GD+ DR TP S+  L  +     I+ G  +   +
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSL-NLKKTTSISCGKDHTAIL 237

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T +G V++FGSG    LGH    +EL+PR +      G  V R++ G  H + L  +  +
Sbjct: 238 TKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW--GAKVTRIACGRYHTLVLQENNKI 295

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPL 256
           Y++G      LG  ++   ++P P+
Sbjct: 296 YSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 14/223 (6%)

Query: 74  CGDNSSFCCGHR------DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           CGD+       +      D  + ++ PR++EA   +P  QV  G   T  LT  G V+T 
Sbjct: 82  CGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTW 141

Query: 128 GSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           G N+ GQLG G       +P+ +  L  +  +VQ++AG  +  A++ +G V  FG G N 
Sbjct: 142 GQNSRGQLGLGKKGCSISSPQCVRSLSGM-PLVQVSAGGDHSFALSVSGSV--FGWGRND 198

Query: 187 C--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           C  LG G+  D   P ++ +   K      +S G +H   L   G V+T+G G  G LGH
Sbjct: 199 CGQLGLGDSQDRCTPTSVDSLNLK--KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGH 256

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
               ++  P  ++ L      ++   +  T VL +   +Y FG
Sbjct: 257 NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFG 299



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 6/163 (3%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLS 257
           PR ++ F R  I V +V+ G  H VAL   G VYTWG+   G LG G +    + P+ + 
Sbjct: 108 PRMLEAFCR--IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVR 165

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           SL     VQV A    +F L  +GSV+G+G    G LG  D   S     P  +DSL   
Sbjct: 166 SLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGD---SQDRCTPTSVDSLNLK 222

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             + IS G  HT ++T  G +F FG  +  QLGH++ R  L P
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRP 265



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G  H+  +S S SVF  G + CG LG G    +C   T ++  +      +S  +
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTP-TSVDSLNLKKTTSISCGK 231

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H A + + G VFT G       GH +++R   RPRLV  L G    ++  G   T  L 
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGH-NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQ 290

Query: 120 IRGHVHTCGSNTHGQLGHGD 139
               +++ G N   QLG  +
Sbjct: 291 ENNKIYSFGCNDQNQLGRSN 310



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            + ++  +G+ F +   +  +  + R  Q F +    +  V  GD+ V+ L   G VY  
Sbjct: 40  ALAFAKTNGNAFVMRTSDGENGARMRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSVY-- 97

Query: 235 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
                        +D T    LP  L +       QV    R T  L   G VY +G   
Sbjct: 98  ------------RVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNS 145

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG   +G S  +  P+ + SL    + Q+S G  H+  ++  G +FG+G N+  QLG
Sbjct: 146 RGQLGLGKKGCS--ISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLG 203

Query: 351 HDTLRGCLEPTEIFIQEMEEDTGLA 375
               +    PT +    +++ T ++
Sbjct: 204 LGDSQDRCTPTSVDSLNLKKTTSIS 228


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 24/377 (6%)

Query: 7    RYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENH 61
            R  TL + S+ + ++ G +  G LG G   TQ      +  P+ A      VQVSA +  
Sbjct: 676  RGFTLAVGSDGNAYAWGRNNYGQLGDG-TLTQRNKPVIVKKPAGASADFTYVQVSAGDEQ 734

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 117
            +  V   G V+  G+N S   G+  +      P  V    +   G+   QV+AG   +  
Sbjct: 735  SLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLA 794

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNG 175
            L  RG++   G N  G+LG+G+ ++   P       + G+V  +Q++ G  +  A+   G
Sbjct: 795  LDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKG 854

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTW 234
              +S+G      LG+G   D   P  +Q  R  G +  ++VSAG +H + +D+ G  + W
Sbjct: 855  NTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAW 914

Query: 235  GKGYCGALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            G    G LG+G       P P       +  +  A+QV A    +  +   G+ + +G  
Sbjct: 915  GWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGN 974

Query: 290  GFGSLGFPDRGVSDKVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
              G LG    G + K   P ++   +   A    Q+S G YH++ +   G+ + +G N+ 
Sbjct: 975  DSGELGI---GTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQF 1031

Query: 347  AQLGHDTLRGCLEPTEI 363
             QLG+ T+     PT +
Sbjct: 1032 GQLGNGTISNSSIPTPV 1048



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 18/271 (6%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV---QVS 56
            +Q++ G YH+L L +  ++++ G +  G LG+G      +  T   +P  A  V   QVS
Sbjct: 783  VQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIP-TLAQYPRDAGTVTAIQVS 841

Query: 57   ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAG 111
               +H A +   G  ++ G N     G+ +        P+  PR    ++ +   QV+AG
Sbjct: 842  GGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI---QVSAG 898

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSV--VQIAAGPSY 167
             + +  +  +G+    G N  G+LG+G +     P P  +   E  G+V  +Q++AG  +
Sbjct: 899  ADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYH 958

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALD 226
             LA+  NG  +++G   +  LG G       P  +Q  +  G +  V+VSAG  H + +D
Sbjct: 959  SLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGID 1018

Query: 227  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
              G  + WG    G LG+G   + ++P P++
Sbjct: 1019 KEGKTWAWGYNQFGQLGNGTISNSSIPTPVA 1049


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 140/323 (43%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIVCGSRHVALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESLSVTIVDFISCG 316

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGL-QVLSVACGSWHS 375

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
             +T  G +Y+FG G    LGHG +     P+ ++     G   V+V+ G  H  A+   
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEAL--NGFRTVKVACGVWHSAAIVEA 433

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  +YTWG G    LG GD+  + +P  L +L  H   Q+   +  T  L 
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALA 493

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 494 TSGHVYTMGSSDNGQLGNPKSDGKHPCL---VKDKLANELVEEISCGAAHVAVLTSRSEV 550

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  L     PT
Sbjct: 551 YTWGLGANGRLGHGDLNDKKTPT 573



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 260 QIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDF------- 312

Query: 54  QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 110
            +S  E H   +  SG +F  GD S  +   G+ DT    + P+ V   L+G+    V  
Sbjct: 313 -ISCGEFHTCAISASGDLFNWGDGSYRAGLLGY-DTGASHWLPKRVSGPLEGLQVLSVAC 370

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T  G ++T G    G LGHG+      PK +  L      V++A G  +  A
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGF-RTVKVACGVWHSAA 429

Query: 171 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +      TG  VV    Y++G G    LG G++   L P  +Q       H  ++  G  
Sbjct: 430 IVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFH--QLGCGQN 487

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             VAL +SG+VYT G    G LG+     K        L + L  ++        VL   
Sbjct: 488 MTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSR 547

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 548 SEVYTWGLGANGRLGHGD--LNDKKT-PTIVEALKDRHVKSISCGSNFTTCI 596



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 16/293 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 303

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            L  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 304 SL-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRV-SGPLE 361

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     V+V 
Sbjct: 362 GLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVA 421

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                +  +V+     G        + W G G      +G  +  L P  L +L  H+  
Sbjct: 422 CGVWHSAAIVEASVQTGMNVVSKKLYTW-GDGDKNRLGQGDKEARLIPTCLQALLEHNFH 480

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 370
           Q+  G   TV +   G ++  G ++  QLG+    G   CL   ++  + +EE
Sbjct: 481 QLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEE 533


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 18/301 (5%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           V+  + H A V +SG++FT G N     G  D  +   RP  V+ LK    K V  G   
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGI-DEVKVSTRPCCVKKLKPEKVKVVACGRIH 99

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAV 171
           T   T  G ++T G+N  GQLG  D      P S  P++   E      +AAG  + +A+
Sbjct: 100 TIVATESGCLYTFGANGDGQLGVEDI-----PSSNCPVKVECEPRQYKALAAGADHSVAL 154

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T +G +Y +G GS   LG G+  D+  P  + T  +    V+ V+ G  H   +   G V
Sbjct: 155 TDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNK----VISVACGYYHTAFVTDVGEV 210

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           +T+G+G  G LG G +  K +     ++        C     T VL + G VY FG  G 
Sbjct: 211 FTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSH-TVVLTECGKVYTFGEGGN 269

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG  ++    +   P  L+    H V+QI+ G  HT +VT++G+L+ FGD   A+LG 
Sbjct: 270 GQLGHKNKYFYCET--PVWLNF--KHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGL 325

Query: 352 D 352
           D
Sbjct: 326 D 326



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 9/208 (4%)

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +A G  +   VT +G +++FG      LG  E     +P  ++  + + + VV  + G  
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVV--ACGRI 98

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H +    SG +YT+G    G LG  D      P  +          + A    +  L D 
Sbjct: 99  HTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA-LAAGADHSVALTDD 157

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G +Y +G    G LG  D  + DK   P +L +   + V  ++ G YHT  VTD G +F 
Sbjct: 158 GELYVWGGGSEGQLGLGD--IDDKST-PTLLST--DNKVISVACGYYHTAFVTDVGEVFT 212

Query: 341 FGDNERAQLGHDTLRG-CLEPTEIFIQE 367
           FG+ +  +LG  T  G  + P ++ I E
Sbjct: 213 FGEGDGGKLGQGTDYGKAVAPKKVNIPE 240



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G     D L  +    F  +G     V+ GDEH   +  SG ++T+G    G 
Sbjct: 12  SGAIFTFGKSRFGDNLPNK----FWVRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQ 67

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG  +    T P  +  LK      V   +  T V  ++G +Y FG  G G LG  D   
Sbjct: 68  LGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPS 127

Query: 302 SDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           S+  ++    PR   +L A        G  H+V +TD G L+ +G     QLG
Sbjct: 128 SNCPVKVECEPRQYKALAA--------GADHSVALTDDGELYVWGGGSEGQLG 172



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G YHT  +++   VF+ G    G LG G +  + V+  ++N P  A  V    S 
Sbjct: 192 ISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGS- 250

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   + + G+V+T G+  +   GH++       P  +     V   Q+ AG N T  +T
Sbjct: 251 -HTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKV--TQIAAGENHTALVT 307

Query: 120 IRGHVHTCGSNTHGQLG 136
            +G ++T G   H +LG
Sbjct: 308 EKGQLYTFGDGRHAKLG 324



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 10/177 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ V+    H AFV   G+VFT G+      G          P+ V   +    K V  G
Sbjct: 191 VISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKA--KSVACG 248

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  LT  G V+T G   +GQLGH +      TP     L     V QIAAG ++   
Sbjct: 249 GSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETP---VWLNFKHKVTQIAAGENHTAL 305

Query: 171 VTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           VT  G +Y+FG G +  LG  H    ++  P+  + F +    V +VS G  H++ L
Sbjct: 306 VTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSK--FIVTQVSCGGCHMIVL 360



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++AGD+  +    SG ++T+GK   G           LP     ++   A  V      T
Sbjct: 1   MAAGDDSEIP--ESGAIFTFGKSRFG---------DNLPNKFW-VRGDKAKSVACGDEHT 48

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            ++ ++G ++ FG   +G LG  +  VS    RP  +  L+   V  ++ G  HT+V T+
Sbjct: 49  ALVTESGRLFTFGVNDWGQLGIDEVKVS---TRPCCVKKLKPEKVKVVACGRIHTIVATE 105

Query: 335 RGRLFGFGDNERAQLG 350
            G L+ FG N   QLG
Sbjct: 106 SGCLYTFGANGDGQLG 121



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 13/84 (15%)

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           + ++G+++ FG   FG    P++              +R      ++ G  HT +VT+ G
Sbjct: 9   IPESGAIFTFGKSRFGD-NLPNKFW------------VRGDKAKSVACGDEHTALVTESG 55

Query: 337 RLFGFGDNERAQLGHDTLRGCLEP 360
           RLF FG N+  QLG D ++    P
Sbjct: 56  RLFTFGVNDWGQLGIDEVKVSTRP 79


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 24/314 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 109
           V  ++  ENHAA + + G+V+T G   S+  G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPS 166
            G   T  +T+ G +   G   H      D   R      K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 225
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 337 RLFGFGDNERAQLG 350
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 201
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 262 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 112 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 219
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 146 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 258
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 259 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 318 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 172
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 173 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 326
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 76
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 77  NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 24/314 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 109
           V  ++  ENHAA + + G+V+T G   S+  G  D   N     P++VE+L  V  K V 
Sbjct: 265 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 321

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPS 166
            G   T  +T+ G +   G   H      D   R      K + P++ + SV +IA G  
Sbjct: 322 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 380

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 225
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 381 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 438

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 439 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 498

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 499 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 555

Query: 337 RLFGFGDNERAQLG 350
           ++F +G     QLG
Sbjct: 556 KVFTWGKGAEGQLG 569



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 250 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 309

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 201
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 310 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 367

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 368 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 421

Query: 262 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 422 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 478

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 479 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 523



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 372 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 430

Query: 112 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 431 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 489

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 219
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 490 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 545

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 546 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 586



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 146 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 250 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 307

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 258
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 308 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 365

Query: 259 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 366 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 422

Query: 318 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 423 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 476



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 268 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 326

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 327 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 386

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 172
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 387 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 444

Query: 173 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 445 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 502

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 503 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 563 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 603



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 261 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 320

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 326
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 321 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 379

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 380 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 416



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 76
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 505 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 77  NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 563 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 605


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 13/248 (5%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L+ V    ++ G      +T  G V+T G   +GQLGHGD +D+  P+ +  ++  G V 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK--GEVK 327

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            ++AG  + +AVT +G ++++G G    LGH +    L P  +  F   G+ V    AG 
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            H + L+  G V+++G G  G LGHG++ D+  P  LS+L+S   V + A    +  L D
Sbjct: 388 SHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD 447

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-----DSLRAHHVSQISTGLYHTVVVTD 334
            G +Y +G    G LG      SD+VL PR L     D+++A     ++ G  HT +   
Sbjct: 448 QGQIYTWGCGKLGRLGHGSD--SDEVL-PRKLALISHDTIKA---IAVAAGEAHTCIFRS 501

Query: 335 RGRLFGFG 342
            G L   G
Sbjct: 502 EGSLITLG 509



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           V++ G    G LGHG +  + +     RI       V  VSA   H   V   G +FT G
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK----GEVKSVSAGFYHTVAVTHHGALFTWG 349

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
           D      GH D  + +  P LV A    G+P     AG + T  L  RG V + GS   G
Sbjct: 350 DGKEGKLGHNDNAQRLI-PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSG 408

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           +LGHG+  D+ +P  ++ LE     V IAAG ++ +A+T  G +Y++G G    LGHG  
Sbjct: 409 RLGHGNDNDQWSPTFLSALES-ERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSD 467

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
            DE+ PR +       I  + V+AG+ H     S G + T G+   G +  G
Sbjct: 468 SDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEG 519



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 10/194 (5%)

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++ G  +  AVT  G+VY++G G    LGHG+  D++ P+ +   R KG  V  VSAG  
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP--RIKG-EVKSVSAGFY 334

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK---RKTFVL 277
           H VA+   G ++TWG G  G LGH D   + +P  +++      + V A +     T VL
Sbjct: 335 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFI-EWGMPVAAAQAGGSHTLVL 393

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
              G V+ FG    G LG    G  +    P  L +L +     I+ G  H+V +TD+G+
Sbjct: 394 NRRGQVFSFGSGDSGRLG---HGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQ 450

Query: 338 LFGFGDNERAQLGH 351
           ++ +G  +  +LGH
Sbjct: 451 IYTWGCGKLGRLGH 464



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 207 RKGIHVVR------VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
           R G+ ++R      +S G  H  A+  +G VYTWG+G  G LGHGD++DK +P+P+  +K
Sbjct: 264 RAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK 323

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHH 318
             +   V A    T  +   G+++ +G    G LG  D     + L P ++ +       
Sbjct: 324 GEVK-SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNA---QRLIPTLVAAFIEWGMP 379

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
           V+    G  HT+V+  RG++F FG  +  +LGH        PT  F+  +E +
Sbjct: 380 VAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPT--FLSALESE 430


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 321

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 322 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 380

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 438

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 439 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 498

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 499 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 555

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH ++    +PT
Sbjct: 556 YTWGMGANGRLGHGSVEDKKKPT 578



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 318 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 376

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 117
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 377 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 435

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 436 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 494

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 227
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 495 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 551

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 552 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 584



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 232 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 287

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 187
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 288 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 346

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 347 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 405

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 299
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 406 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 464

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRG 356
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+   D  + 
Sbjct: 465 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQP 524

Query: 357 CLEPTEIFIQEMEE 370
           C+   ++  + +EE
Sbjct: 525 CMVQDKLGNELVEE 538



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 20/344 (5%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 265 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 323

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 324 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 383

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 175
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 384 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 442

Query: 176 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 443 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 500

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 501 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 560

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG     V DK  +P ++D+L+  HV  IS G   T  +
Sbjct: 561 GANGRLGHG--SVEDKK-KPTLVDALKDRHVKSISCGSNFTTCI 601



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 274

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 275 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 334

Query: 284 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 335 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 392

Query: 342 GDNERAQLGHDTLRGCLEPTEI 363
           GD     LGH        P E+
Sbjct: 393 GDGTFGSLGHGDRESVAYPKEV 414


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ ++   +  +VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +G+ V++V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALP 276

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
             +++ K  +A V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+S+G      LG+G  +  L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G +G G   ++  P  +SS L++   V +   +  +  ++D+G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG  + G      R   + +L+   V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 115
           ++ N A +V  + +VF  G N S C G  D    I  PR ++AL G     ++ G     
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDALCGKKIVSLSYGTGPHV 87

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
              T  G V + G N + QLG+G T    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  ++  +G G   ++  PR + +  +    VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKA-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 24/314 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 109
           V  ++  ENHAA + + G+V+T G   S+  G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPS 166
            G   T  +T+ G +   G   H      D   R      K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 225
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 226 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 337 RLFGFGDNERAQLG 350
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 201
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 262 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 311
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 112 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 219
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 146 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 258
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 259 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 318 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 172
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 173 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 326
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 76
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 77  NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 5/227 (2%)

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           ++CG N+ GQLG         P+ I  L ++  V  ++ G  + +AV   G V+ +G+GS
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDL-HVDLVSCGKEHSVAVCHKGKVFPWGAGS 59

Query: 185 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              LG GE +     P  I+     GI +++VS G  H +AL   G+V++WG+   G LG
Sbjct: 60  EGQLGIGEFKEISFMPTKIKAL--AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117

Query: 244 HG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
            G +   + +P+ + SL+     QV A    +F L  TG+ +G+G    G L      V 
Sbjct: 118 LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVK 177

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           +++ +P  + +L+   V  IS G  HT V+T+ G++F FG N   QL
Sbjct: 178 EQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 26/282 (9%)

Query: 19  FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           +SCG +  G LG         PE  Q ++          HV  VS  + H+  V   G+V
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHVDLVSCGKEHSVAVCHKGKV 52

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           F  G  S    G  +     F P  ++AL G+   QV+ G   +  L+  GHV + G N+
Sbjct: 53  FPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNS 112

Query: 132 HGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN----F 186
            GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A++  G   SFG GSN     
Sbjct: 113 EGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT--SFGWGSNRSGQL 169

Query: 187 CLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
            L   +  +++ +P +I     K + V+ +S G EH   L   G V+T+G    G L   
Sbjct: 170 ALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPS 227

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
               +  P+ +  +   ++   CA       +  TG V   G
Sbjct: 228 PRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G+ H++ + +   VF  G+   G LG G         T+I   +   ++QVS    H
Sbjct: 36  VSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 95

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 96  SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 155

Query: 122 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 156 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 214

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+
Sbjct: 215 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ 264



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           Y+ G    G LG   +     PEP+ +L   H+ +  C  K  +  +   G V+ +G   
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCG-KEHSVAVCHKGKVFPWGAGS 59

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG  +    +    P  + +L    + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 60  EGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 340 GFGDNERAQLGH 351
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 20/321 (6%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G  
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACGEF 287

Query: 114 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 170
            T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHSAL 346

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 225
              +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+     
Sbjct: 347 TMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEISG 404

Query: 226 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
                  S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L  +
Sbjct: 405 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  ++ 
Sbjct: 465 GHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYT 521

Query: 341 FGDNERAQLGHDTLRGCLEPT 361
           +G     +LGH ++    +PT
Sbjct: 522 WGMGANGRLGHGSVEDKKKPT 542



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 3   ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 58
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 340

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 117
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 341 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 399

Query: 118 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 458

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 227
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 459 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 515

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 260
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 516 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 548



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 20/344 (5%)

Query: 2   QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 287

Query: 61  HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 347

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 175
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 348 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 406

Query: 176 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 407 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 464

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 524

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
              G LG     V DK  +P ++D+L+  HV  IS G   T  +
Sbjct: 525 GANGRLGHG--SVEDKK-KPTLVDALKDRHVKSISCGSNFTTCI 565



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 16/278 (5%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           +Q+  G    G  T +G V T G    G+LGHG   D   PK +  L  V +V  IA G 
Sbjct: 228 EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGE 286

Query: 166 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            +   VT +G +Y +G GS     LGHG       P+ + +   +G+ V+ V+ G  H  
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSA 345

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG-- 281
              SSG ++T+G G  G+LGHGD      P+ + +L    A++V      +  +V+    
Sbjct: 346 LTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQ 405

Query: 282 ------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
                 S   F W G G       G  +  L P  + +L  H+  Q++ G   TV +   
Sbjct: 406 ASTNAMSRKLFTW-GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 336 GRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           G +F  G +   QLG+   D  + C+   ++  + +EE
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEE 502


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 10/295 (3%)

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           S  ++T G   ++  G R T     +P L++  +    +QV  G   T  L   G +H+ 
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSF 68

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G N +GQLG+G  +D P   S         ++ +A G  +  A+  NG V+++G G N  
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGR 128

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGH ++     P  I    R      ++  G  H+ A  +   +YTWG G  G LG G  
Sbjct: 129 LGHNDEQTRTIPCRITHLPR----AHKIFCG-YHITAAITDDGLYTWGWGEHGQLGQGSL 183

Query: 248 IDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
            D   P+ +    ++LA+ Q+    R   V  ++G VY +G   FG LG    G  +++ 
Sbjct: 184 EDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGI---GRYNEIY 240

Query: 307 -RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             P +L SL    V+ ++ G  H+  VT+ G LF +G     Q GH     C  P
Sbjct: 241 SSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMP 295



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HTL L+ +  + S G +  G LG+G +    +  +R     +  ++ V+    
Sbjct: 48  QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRY 107

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGL 112
           H+A +  +G VFT G   +   GH D           E  + +PC+        ++  G 
Sbjct: 108 HSAALDVNGTVFTWGGGKNGRLGHND-----------EQTRTIPCRITHLPRAHKIFCGY 156

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           + T  +T  G ++T G   HGQLG G   D   PK +   +   ++ Q+A G  + L  T
Sbjct: 157 HITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRT 215

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G VY++GS     LG G +++E+    +      G+ V  V+AGD H  A+ ++G ++
Sbjct: 216 ESGDVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLF 274

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           TWG G  G  GHGD  D  +P  + SL     ++V      T  L     +Y FG   +G
Sbjct: 275 TWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYG 334

Query: 293 SLGFPDRGVSDKVLRPRIL 311
            LG    G       PR L
Sbjct: 335 QLG---DGSKSSCCTPRKL 350



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)

Query: 176 VVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            +Y++G   N+ LG  G + D  QP  I+ F    I   +V+ G  H + L   G ++++
Sbjct: 11  ALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQ--QVACGGGHTLVLLEDGCLHSF 68

Query: 235 GKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G    G LG+G ++D  L     +SSL + L    C R     + V+ G+V+ +G    G
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVN-GTVFTWGGGKNG 127

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  D     + +  RI    RAH   +I  G + T  +TD G L+ +G  E  QLG  
Sbjct: 128 RLGHNDE--QTRTIPCRITHLPRAH---KIFCGYHITAAITDDG-LYTWGWGEHGQLGQG 181

Query: 353 TLRGCLEPTEIFIQE 367
           +L     P ++   +
Sbjct: 182 SLEDSYGPKKVIFDD 196



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 227 SSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           +S  +YTWG+     LG  G   D   PE +   ++    QV      T VL++ G ++ 
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           FG+  +G LG   + V   +   R + SL ++ +  ++ G YH+  +   G +F +G  +
Sbjct: 68  FGYNQYGQLGNGTK-VDSPLDASRDISSL-SNKLIAVACGRYHSAALDVNGTVFTWGGGK 125

Query: 346 RAQLGHD 352
             +LGH+
Sbjct: 126 NGRLGHN 132


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 161/373 (43%), Gaps = 47/373 (12%)

Query: 14  SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 69
           + + +FS G +  G L  G      T   V   RIN     HVV V+        + ++G
Sbjct: 28  NRAGLFSFGQNTYGELALGDTNDRSTPTRVDLGRIN--DTKHVVDVACGNEQTTILFENG 85

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-------FTG------ 116
            VFTCG N S  C    T R             VP  + + GL+       F+G      
Sbjct: 86  DVFTCGYNDSGQCAIGTTER-------------VPSLRFSPGLSSHHTVRLFSGNGSEHL 132

Query: 117 -FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 173
             L   G ++T G N  GQLG G      T      +EE+    VV +A    +   V  
Sbjct: 133 AALCANGFLYTVGFNMRGQLGLGTAT---TVTEATLVEELAGKRVVDVACSYFHTAIVMD 189

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           NG +++ G      LG G+    L PR +  F R    V+ V+ G  + VA    G V  
Sbjct: 190 NGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHP--VLAVACGQHYTVASLRDGGVVA 247

Query: 234 WGKGYCGALGHGDEIDKT--LPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +GK   G LG  D + +   LP  L+  L   +  Q+      T ++ + G+VY FG   
Sbjct: 248 FGKNDHGQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRND 306

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +G LG    G    + RP  ++SL    ++Q++ G YHT+ ++D G++F FG N   QLG
Sbjct: 307 YGQLGL---GHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLG 363

Query: 351 HDTLRGCLEPTEI 363
            +T   CL P  I
Sbjct: 364 LETSMDCLSPQLI 376



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 141/328 (42%), Gaps = 17/328 (5%)

Query: 10  TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE--NHAAFV 65
           T+L  N  VF+CG +  G    G  TT+ V   R + P  S+ H V++ +     H A +
Sbjct: 79  TILFENGDVFTCGYNDSGQCAIG--TTERVPSLRFS-PGLSSHHTVRLFSGNGSEHLAAL 135

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             +G ++T G N     G   T   +    LVE L G     V      T  +   G +H
Sbjct: 136 CANGFLYTVGFNMRGQLG-LGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLH 194

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            CG N +GQLG GD      P+ +        V+ +A G  Y +A   +G V +FG   +
Sbjct: 195 ACGCNDYGQLGMGDHSGHLVPRPVDYFFR-HPVLAVACGQHYTVASLRDGGVVAFGKNDH 253

Query: 186 FCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
             LG     +  L P  +     + + V ++S G  H   +   G VYT+G+   G LG 
Sbjct: 254 GQLGLDRVSEPVLLPTRLAPPLDRAV-VPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGL 312

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G ++    P P+ SL      QV      T  L D G V+ FG    G LG      S  
Sbjct: 313 GHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLE---TSMD 369

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVV 332
            L P+++ +LR      ++ G YH+V +
Sbjct: 370 CLSPQLISTLRN---KPVAAGFYHSVCL 394



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 9/227 (3%)

Query: 1   MQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +    +HT +++ N  + +CG +  G LG G  +   V    +++     V+ V+  +
Sbjct: 175 VDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVP-RPVDYFFRHPVLAVACGQ 233

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFL 118
           ++    L+ G V   G N     G    + P+  P RL   L      Q++ G + T  +
Sbjct: 234 HYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIV 293

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V+T G N +GQLG G  L    P  +  L  +  + Q+A G  + LA++ +G V+
Sbjct: 294 TEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRM-RITQVACGCYHTLALSDDGKVF 352

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            FG  ++  LG     D L P+ I T R K      V+AG  H V L
Sbjct: 353 PFGRNNHGQLGLETSMDCLSPQLISTLRNK-----PVAAGFYHSVCL 394


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +++CG N++G+LG GD ++R    S+ PL     + Q+ +G   +  +T +GVV + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSV-PLCGWDHIRQVVSGNEILAILTSDGVVLTCG 406

Query: 182 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
              +   GHG   DE  +  R IQ  R   +  +  S G EH++A+  +G  Y+WG    
Sbjct: 407 LNKSGQCGHG-NFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 240 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH +   K  LP+ + S+K             + ++  +G +Y FG    G LG   
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDH 525

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              +     P+++ +L  HHVS +S GLYH V+ T  G +F  G N+  QLG    +   
Sbjct: 526 ---TQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK 582

Query: 359 EPTEIFI 365
            PT++ +
Sbjct: 583 VPTQVVL 589



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 154/354 (43%), Gaps = 24/354 (6%)

Query: 12   LISNSSVFSCGSSLCG--VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 69
            +     +FSCG +  G   LGH   T +     R +F S   +  ++        +++ G
Sbjct: 3129 MFEECEIFSCGQNNYGELCLGHCNPTNK---LERASFFSYKSIQSIAGGNEVLVVLMKDG 3185

Query: 70   QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 127
             VFTCG N S  CG  + +  +  P  + AL G+P   V A       L I   G V++ 
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245

Query: 128  GSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N  GQLG G T+ +  TP+ I  L E   +   A    +   V+ NG + +FG   + 
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSG 3305

Query: 187  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--H 244
             LG      +  P+ ++T   +   V RV+ G  H VA+   G VY++GK   G LG  H
Sbjct: 3306 QLGLDHTQHQHTPQLVETLSSQ--KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363

Query: 245  GDEID-----KTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
                      K  P P + +   +  AVQV      T  +++ G V  +G   +G LG  
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423

Query: 298  DRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             +   S     P  L S     V + S G YHT+++   GR   FG N + QLG
Sbjct: 3424 SKEHKSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 11/337 (3%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           ++SCG +  G LG G +  +    T +      H+ QV +     A +   G V TCG N
Sbjct: 350 LYSCGQNSYGELGLGDDIERH-QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGLN 408

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 135
            S  CGH + +  +   R ++AL+    K + A  G      +T  G  ++ G N  GQL
Sbjct: 409 KSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468

Query: 136 GHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           GH +   +   PK I  ++E   +   A    +   V+ +G +Y+FG      LG     
Sbjct: 469 GHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
            +  P+ ++     G HV  VS G  H+V    SG V+T GK   G LG G      +P 
Sbjct: 528 HQSTPQLVKALL--GHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPT 585

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
            +  L + L   V         +  TG  Y FG   +G LG   +   +  +   I  + 
Sbjct: 586 QV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNT 644

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           R  H    + G YHT++++D G++F FG N + QLG+
Sbjct: 645 RMVHA---ACGCYHTLLMSDSGQVFVFGRNNKGQLGN 678



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 16/340 (4%)

Query: 11  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 68
           +L S+  V +CG +  G  GHG    + +    I    +  V  ++AS    H   +  +
Sbjct: 395 ILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G  ++ G N     GH +    ++ P+L+E++K    K      + +  +++ G ++T G
Sbjct: 455 GLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
            N  GQLG   T  + TP+ +  L  +G  V  ++ G  +M+  T +G V++ G   +  
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKAL--LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQ 572

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G  H++      Q      + V  V+ G  H  A+ S+G  Y++G+   G LG G +
Sbjct: 573 LGLG--HNKQVKVPTQVVLPNEL-VCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK 629

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV-- 305
           I + +P  L+   +   V        T ++ D+G V+ FG    G LG  +RG +D +  
Sbjct: 630 IHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLG--NRGNTDSLLP 687

Query: 306 --LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
             L+ R   ++R      I+ G Y T ++ +R R    GD
Sbjct: 688 VPLKVRPEKNMR--RCLHIAAGFYTTSLIVERKRENDEGD 725



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 161/379 (42%), Gaps = 24/379 (6%)

Query: 11   LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 68
            +L+ + +VF+CG +  G  G G    + +  + I   S   +  V+AS    H   +   
Sbjct: 3180 VLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239

Query: 69   GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTC 127
            G V++ G N     G   T      PR++E+L+        A   + +  ++  G + T 
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299

Query: 128  GSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N  GQLG   T  + TP+ +  L  ++VG   ++A G  + +A+  +G VYSFG    
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVG---RVACGLYHTVAIVDDGDVYSFGKNEY 3356

Query: 186  FCLGHGEQHDELQPRAIQ------TFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 238
              LG     +   P  ++      T     ++  V+V  G  H V +   G V TWG+  
Sbjct: 3357 GQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRND 3416

Query: 239  CGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
             G LG G +  K++ +  PL  L S +    C       +LV+ G    FG    G LG 
Sbjct: 3417 YGQLGIGSKEHKSIAQFVPL-PLTSRVKRASCGCYHTLLLLVN-GRPMVFGRNNKGQLGV 3474

Query: 297  PDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR---GRLFGFGDNERAQLGHD 352
              R + S  +  P  L  L +  V  IS G Y + ++T +    +L   G N       +
Sbjct: 3475 ASRSLPSADLPLPIPLHPLSSDEVVYISAGFYCSYILTGKEANDQLQAMGGNPTENPAEE 3534

Query: 353  -TLRGCLEPTEIFIQEMEE 370
             T R C    ++F   M++
Sbjct: 3535 MTSRTCRTSEKLFQDLMKQ 3553



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 18/216 (8%)

Query: 144  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRA 201
            P   SI+ LE+ G   Q ++  S M        ++S G  +    CLGH    ++L+  +
Sbjct: 3106 PNNTSIS-LEQKGKDCQWSSTSSPMFE---ECEIFSCGQNNYGELCLGHCNPTNKLERAS 3161

Query: 202  IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLK 260
               F  K I    ++ G+E +V L   G V+T G    G  G G+  ++ + P P+ +L 
Sbjct: 3162 F--FSYKSIQ--SIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALS 3217

Query: 261  SHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAH 317
                  V A         +   G+VY +G+   G LG    G +  K   PR+++SLR  
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL---GTTVSKSHTPRVIESLREK 3274

Query: 318  H-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            + ++  +   +H+ VV++ G L  FG N+  QLG D
Sbjct: 3275 YFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLD 3310


>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
          Length = 531

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 9/250 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 174
           ++T    V+  GSN    LG GD      P+ +  L +   +V IA  +GP ++LAV+ N
Sbjct: 36  YITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCK-KKIVDIAFGSGP-HVLAVSKN 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G +YS+G      LG+G     L P  I T   +G  ++RV+ G  H +AL   G ++ W
Sbjct: 94  GEMYSWGHNGYCQLGNGGSGQGLTPTLINT-NLQGKKILRVACGSHHSMALSQEGEIFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G+  CG +G G   ++  P  + + + + +A+ +   +  +  L++ G VYG+G+ G G 
Sbjct: 153 GQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG    G +     P  +  L+   +SQ+  G  HT+ ++D G LF +G N   QLG   
Sbjct: 213 LGL---GNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSWGANSYGQLGTGN 269

Query: 354 LRGCLEPTEI 363
               + P+++
Sbjct: 270 KANQVSPSKV 279



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 11/289 (3%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVS-ASEN 60
           ++G     + ++  V++ GS+    LG G   +   SF   +++      +V ++  S  
Sbjct: 29  SSGNEAIYITNDDEVYAIGSNCSSCLGLGDAHS---SFEPRKVDVLCKKKIVDIAFGSGP 85

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V ++G++++ G N     G+  + + +    +   L+G    +V  G + +  L+ 
Sbjct: 86  HVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQ+G G T ++PTP+ +  +      + IA G +  +A+  NG VY +
Sbjct: 146 EGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++  P  +Q  +  G+ + ++  G  H +AL   G +++WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQPNPCRVQQLQ--GVIISQLVCGYAHTLALSDEGSLFSWGANSYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 287
            LG G++ ++  P  +  +     V++ A      +  + +TG V+ +G
Sbjct: 264 QLGTGNKANQVSPSKV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 5/285 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF+ G++  G LG G +T   +   RI+      ++ +S  +  H       G+V+ 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN  +    +   L G    +V+ G + T  LT  G V+  G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG  Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNN 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +GI++++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVP 276

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             ++  K  +  V  C     +     +G V  +G     ++ +P
Sbjct: 277 TLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVAYP 321



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T+   V   G+N  G LG GDT     P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISL-SYGTGPHVVIA-TAD 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VY++G      LG+G  +  L P  + T    G  V  VS G  H +AL + G VY W
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G  YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLG 266



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           ++ N A +V  + +VF  G N S C G  DT   I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTI-EPRRIDILCGKKIISLSYG---TG 84

Query: 117 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                 T  G V+  G N + QLG+G T    TP  ++       V +++ G  + +A+T
Sbjct: 85  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALT 144

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G  Y
Sbjct: 145 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGETY 203

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG    G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYG 263

Query: 293 SLG 295
            LG
Sbjct: 264 QLG 266


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 22/369 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G +HTL L SN +V+S G +  G LG+G   TQ  +   +N   A   V +SA  
Sbjct: 157 VAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGA 213

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +  +G V + G N+    G+  T      P  V  L  +  K + AG N +  L 
Sbjct: 214 AHSLALRANGAVVSWGANTYGQLGNGTTTTSA-SPVGVSGLNNI--KSLAAGGNHSLALK 270

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVY 178
             G V   G N +GQ+G+G T +  +P +++ L     V  ++AG S+  A+ + NGV++
Sbjct: 271 SDGTVTAWGYNAYGQVGNGATANVLSPIAVSTLS---GVTAVSAGVSHSHAIGSSNGVIW 327

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G  +   LG+  + +   P  I      G+    V+ G +H + +   G V+ WG   
Sbjct: 328 GWGLNTYGGLGNNTKVNRSTPGTI--LLTSGLQ--GVAGGAQHTIYVKGDGTVWAWGSNT 383

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G +G G  + +  P  LS+L   +AV   A    +  L   G+V+ +G    G LG  D
Sbjct: 384 YGQIGDGTPLRRLTPVQLSTLTGIIAV--AAGANHSLALAANGTVFAWGRNNHGQLG--D 439

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              +++ L P  + +L    +  ++ G  H++ +   G ++ +G N   QLG +T    L
Sbjct: 440 GSTTNRSL-PTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRL 496

Query: 359 EPTEIFIQE 367
            P  +   E
Sbjct: 497 SPVAVHYLE 505



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 22/351 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I+ G  H+L L +N +V S G++  G LG+G  TT   S + +      ++  ++A  
Sbjct: 207 VAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTT---SASPVGVSGLNNIKSLAAGG 263

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
           NH+  +   G V   G N+    G+  T   +  P  V  L GV    V+AG++ +  + 
Sbjct: 264 NHSLALKSDGTVTAWGYNAYGQVGNGATAN-VLSPIAVSTLSGVTA--VSAGVSHSHAIG 320

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           +  G +   G NT+G LG+   ++R TP +I  L   G +  +A G  + + V G+G V+
Sbjct: 321 SSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI--LLTSG-LQGVAGGAQHTIYVKGDGTVW 377

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++GS +   +G G     L P  + T       ++ V+AG  H +AL ++G V+ WG+  
Sbjct: 378 AWGSNTYGQIGDGTPLRRLTPVQLSTLTG----IIAVAAGANHSLALAANGTVFAWGRNN 433

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   +++LP  + +L     V + A    +  L   G+VY +G    G LG  D
Sbjct: 434 HGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLG--D 489

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
              +D+ L P  +  L    V  IS G  H++ +   G  F +G +E  QL
Sbjct: 490 ETCTDR-LSPVAVHYLE--KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL 537



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 25/359 (6%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCV------SFTRINFPSAAHVVQVSASENHAAFV 65
           L S+ +V+S G +    LG+    TQ +      SF  I  P    VV ++A  +H   +
Sbjct: 111 LKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSP-LTDVVAIAAGTHHTLAL 169

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             +G V++ G NSS   G         +   V+A+       ++AG   +  L   G V 
Sbjct: 170 KSNGTVWSWGLNSS---GQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           + G+NT+GQLG+G T    +P  ++ L  + S   +AAG ++ LA+  +G V ++G  + 
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGLNNIKS---LAAGGNHSLALKSDGTVTAWGYNAY 283

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGH 244
             +G+G   + L P A+ T       V  VSAG  H  A+ SS G ++ WG    G LG+
Sbjct: 284 GQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
             +++++ P  +  L S L   V    + T  +   G+V+ +G   +G +G    G   +
Sbjct: 340 NTKVNRSTPGTIL-LTSGLQ-GVAGGAQHTIYVKGDGTVWAWGSNTYGQIG---DGTPLR 394

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            L P  L +L    +  ++ G  H++ +   G +F +G N   QLG  +      PT++
Sbjct: 395 RLTPVQLSTLTG--IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 24/370 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G YH+L L S+ +V++ G +  G LG    TT+      +N      V+ ++A +
Sbjct: 49  ISVAAGYYHSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG---VIAIAA-D 104

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV--PCKQV---TAGLN 113
            + +F L+S G V++ G N +   G+          ++ ++  G+  P   V    AG +
Sbjct: 105 YYQSFALKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTH 164

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T  L   G V + G N+ GQLG+G    +        L +    V I+AG ++ LA+  
Sbjct: 165 HTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGAAHSLALRA 221

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           NG V S+G+ +   LG+G       P  +        ++  ++AG  H +AL S G V  
Sbjct: 222 NGAVVSWGANTYGQLGNGTTTTSASPVGVSGLN----NIKSLAAGGNHSLALKSDGTVTA 277

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G +G+G   +   P  +S+L    AV          +    G ++G+G   +G 
Sbjct: 278 WGYNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHA-IGSSNGVIWGWGLNTYGG 336

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG      + KV R      L    +  ++ G  HT+ V   G ++ +G N   Q+G  T
Sbjct: 337 LGN-----NTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGT 391

Query: 354 LRGCLEPTEI 363
               L P ++
Sbjct: 392 PLRRLTPVQL 401



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 161/367 (43%), Gaps = 22/367 (5%)

Query: 6   GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  HT+ +  + +V++ GS+  G +G G   T     T +   +   ++ V+A  NH+  
Sbjct: 363 GAQHTIYVKGDGTVWAWGSNTYGQIGDG---TPLRRLTPVQLSTLTGIIAVAAGANHSLA 419

Query: 65  VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           +  +G VF  G N+    G    TNR +  P  V  L G+    + AG   +  L   G 
Sbjct: 420 LAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVA--LAAGATHSLALRFDGT 475

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+  G N  GQLG     DR +P ++  LE+V   V I+AG ++ LA+  NG  +++GS 
Sbjct: 476 VYAWGRNHLGQLGDETCTDRLSPVAVHYLEKV---VAISAGDNHSLAIHQNGTAFAWGSD 532

Query: 184 SNFCL-GHGEQHDELQPRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            +  L   G       P   Q     KGI    ++AG  H + L+++G  +  G    G 
Sbjct: 533 EHGQLCDSGSGSGRFSPLISQIPGIVKGI---GIAAGANHTLLLEANGTAWACGDNLYGQ 589

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPD 298
           LG G   DK+ P P+++L +  A ++ A    +  L   G+V  +G    G LG      
Sbjct: 590 LGDGTTTDKSAPVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTAS 647

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           R     VLR           V+ +  G  H   V   G +  +G N+  Q+G  TL    
Sbjct: 648 RTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRP 707

Query: 359 EPTEIFI 365
            PT   +
Sbjct: 708 LPTAALL 714



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 126/307 (41%), Gaps = 17/307 (5%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   V Q G V+  G N     G+  T      P  V  L GV    V AG   +  L  
Sbjct: 7   HTLAVRQDGTVWASGYNYHGELGN-GTATDSLSPVQVSNLTGV--ISVAAGYYHSLALKS 63

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G NT+G LG   T  R  P  +  L     V+ IAA      A+  +G V+S+
Sbjct: 64  DGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLT---GVIAIAADYYQSFALKSDGTVWSW 120

Query: 181 GSGSNFCLGHGEQHDELQPRAIQT----FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           G   N  LG+     +  P  +Q            VV ++AG  H +AL S+G V++WG 
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWGL 180

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG+G    ++      +L    AV + A    +  L   G+V  +G   +G LG 
Sbjct: 181 NSSGQLGNGTLATQSAAVQAVNLTD--AVAISAGAAHSLALRANGAVVSWGANTYGQLG- 237

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G +     P  +  L  +++  ++ G  H++ +   G +  +G N   Q+G+     
Sbjct: 238 --NGTTTTSASPVGVSGL--NNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATAN 293

Query: 357 CLEPTEI 363
            L P  +
Sbjct: 294 VLSPIAV 300



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 23/264 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 55
           + +  G  H+L +  + +V++ G +  G LG   ET  C    R++ P A H    VV +
Sbjct: 458 VALAAGATHSLALRFDGTVYAWGRNHLGQLGD--ET--CTD--RLS-PVAVHYLEKVVAI 510

Query: 56  SASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           SA +NH+  + Q+G  F  G +     C     + R  F P + +    V    + AG N
Sbjct: 511 SAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGR--FSPLISQIPGIVKGIGIAAGAN 568

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T  L   G    CG N +GQLG G T D+  P    P+  + +  ++AAG +   A+T 
Sbjct: 569 HTLLLEANGTAWACGDNLYGQLGDGTTTDKSAP---VPITTLTNAARLAAGGNTSAALTT 625

Query: 174 NGVVYSFGSGSNFCLGHG--EQHDELQP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           NG V ++G  S+  LG         + P  R +         V  + AG  H+ A+ + G
Sbjct: 626 NGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDG 685

Query: 230 YVYTWGKGYCGALGHGDEIDKTLP 253
           YV++WG    G +G G  +++ LP
Sbjct: 686 YVHSWGLNDSGQIGDGTLVNRPLP 709



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G  + LAV  +G V++ G   +  LG+G   D L P  +Q     G  V+ V+AG  H +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTG--VISVAAGYYHSL 59

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           AL S G V+ WG    G L  GD    T  +P+  L     + + A   ++F L   G+V
Sbjct: 60  ALKSDGTVWAWGLNTYGNL--GDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTV 117

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRL 338
           + +G+ G  +LG  +   + + L  ++  S          V  I+ G +HT+ +   G +
Sbjct: 118 WSWGYNGNSALG--NASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTV 175

Query: 339 FGFGDNERAQLGHDTL 354
           + +G N   QLG+ TL
Sbjct: 176 WSWGLNSSGQLGNGTL 191


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 340 GFGDNERAQLGH 351
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 47   PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            PS +   QV   +N  +F++QS  V T      +    +  +  ++ P ++ A +G    
Sbjct: 3047 PSLSQTQQVVCGQN-CSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVT 3105

Query: 107  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3106 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3164

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            G  +   VT +G +++FGSG +  LG     +++ P  +     +G HV +VS G  H +
Sbjct: 3165 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAAL--EGYHVGQVSCGLNHTL 3222

Query: 224  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + V+   G 
Sbjct: 3223 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGH 3282

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3283 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWG 3339

Query: 343  DNERAQLGHDTLRGCLEPTEI 363
             N   QLG        EPT I
Sbjct: 3340 CNSEGQLGLGHCNPVKEPTLI 3360



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 383 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 439

Query: 131 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG    +  P+ IQ      I VV  SAG  H  A+   G +YTWG+G  G LGH D  
Sbjct: 500 GHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQ 558

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            + +P  +  + S +    C       V  D  +V+ FG    G LG    G +++V RP
Sbjct: 559 SRNMPTLVKDI-SGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG---HGDTNRVYRP 614

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 615 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 648



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 149/342 (43%), Gaps = 18/342 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 59
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 118
            H   +   G+VF+ GD      GH ++    + P++++  L        +AG   +  +
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAV 535

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 177
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G  V
Sbjct: 536 TKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG---QVACGSSHTIAVAQDGRTV 592

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 650

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 651 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 707

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 335
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 708 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 749



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 19/368 (5%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 58
            Q+  G+  + LI SN  V + G    G LG G      V      F       +V    S
Sbjct: 3054 QVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3172

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 177
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3173 TADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3231

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            ++FG G    LG G    +  P+ ++    KG+  V   A    VVA D  G+VYT+G+ 
Sbjct: 3232 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACD--GHVYTFGQE 3289

Query: 238  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
                L      +++ P+ + SL+      +         L  TG VY +G    G LG  
Sbjct: 3290 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGL- 3348

Query: 298  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG------- 350
              G  + V  P ++ +L+  ++ QIS G  H+   T        G     QLG       
Sbjct: 3349 --GHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQSVPP 3406

Query: 351  -HDTLRGC 357
             ++TL+ C
Sbjct: 3407 QYNTLKDC 3414



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 11/233 (4%)

Query: 121  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NGVV +
Sbjct: 3019 KSDVYLWGNGRYGQLAGTGTNLTVPT---LAP--SLSQTQQVVCGQNCSFLIQSNGVVTA 3073

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 238
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3074 VGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3134 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3191

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 350
            R  S+K+L  R+  +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3192 RSTSNKMLPERVA-ALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3243



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 21/291 (7%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 124
           G V  CG  S    G  D+N      +LV      +K V   + + G   T  +T+ G V
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDG--HTLAITVDGEV 488

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHG++  +  PK I        VV  +AG  +  AVT +G +Y++G G 
Sbjct: 489 FSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALG 243
              LGH +     Q R + T  +    V +V+ G  H +A+   G  V+++G G  G LG
Sbjct: 549 FGRLGHSDS----QSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG 604

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRG 300
           HGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS       
Sbjct: 605 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS------- 657

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                LRPR ++ L    +  IS G  H + ++    ++ +G+N   Q G 
Sbjct: 658 SETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 708



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 132/329 (40%), Gaps = 49/329 (14%)

Query: 2   QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q+  G  HT+ ++    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 574 QVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGS 632

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ G +    L+
Sbjct: 633 QSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISCGDSHCLALS 690

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
               V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ LA T      
Sbjct: 691 HENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSLAWT------ 743

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY--TWGK 236
                                 A+ T R+       V+      V L+ S + Y   + K
Sbjct: 744 ----------------------AVPTDRQ------LVAWHRPFCVDLEESTFTYLCNFLK 775

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
            YC  L      + T P P  S + H    +   K  + V +      G G +  G+ G 
Sbjct: 776 CYCDGLE-----NDTPPTPFLSKRDHQQFILLCMKLLS-VHLSLAHAGGTGALVLGTQGR 829

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           P R +  +++   + DS++   ++ +S G
Sbjct: 830 PLRNLLFRLIDSNMPDSIQKAVLNTLSIG 858



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L  G   + T+P    SL      QV   +  +F++   G V   G   
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAVGEGQ 3078

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3079 YGRLG---QGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3135

Query: 348  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            +LGH        P +I   + E+   LA
Sbjct: 3136 KLGHGNNERQRRPKQIEALQGEDVVQLA 3163



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 14/127 (11%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           VY WG      L  G      LP   +  S  ++  A Q C     TF +   GSV   G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEAGQYC-----TFSVSTDGSVKACG 437

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDN 344
              +G LG  D   S+    P+ L      ++ ++S+      HT+ +T  G +F +GD 
Sbjct: 438 KGSYGRLGLGD---SNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDG 494

Query: 345 ERAQLGH 351
           E  +LGH
Sbjct: 495 EYGKLGH 501


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 159/371 (42%), Gaps = 43/371 (11%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H++LI  N   F+ G +    LGHG +T  C   T++   +  +V+Q +   NH  F+  
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHG-DTVTCEKPTQVADLADFNVIQAACGRNHTLFLTD 175

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +G V+ CGDN S  CG  +    I  P  + +  G P  +V  G  F+  L I+G++HT 
Sbjct: 176 TGTVYACGDNKSGQCGVGNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLHTF 234

Query: 128 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 163
           G   +GQLGH                           +++     + P+E V +++  A 
Sbjct: 235 GLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV-NIIDFAC 293

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G ++ +A+      YS+G G    LGH EQ DE+ PR I+ F  +   V+RV  G  + +
Sbjct: 294 GNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSL 353

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           A+   G +Y +G+      G  +      P+P+  L       +        +  D   +
Sbjct: 354 AISDIGSLYLFGQN--KKTGEAN----MYPKPVQDLAGWNITSIGTGYTSIVISADDSLI 407

Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
                  +G LG  D   S     P+ +  +    +  ++ G  H++++ +        +
Sbjct: 408 AWGASPTYGELGLGDLQKSSST--PKEVTRMEGMKIPMVALGYSHSMLLVNT-------E 458

Query: 344 NERAQLGHDTL 354
           +E+ +  +D L
Sbjct: 459 HEKTKEKYDNL 469



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 38/310 (12%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S  H+  + ++ + FT G N     GH DT     +P  V  L      Q   G N T F
Sbjct: 114 SAAHSVLIDENWKAFTFGRNQLSQLGHGDT-VTCEKPTQVADLADFNVIQAACGRNHTLF 172

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGV 176
           LT  G V+ CG N  GQ G G+ L  PT  S   +   G  ++++  G  + + +   G 
Sbjct: 173 LTDTGTVYACGDNKSGQCGVGNKL--PTITSPTRISYNGPPIIKVGCGAEFSVILDIKGN 230

Query: 177 VYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----------GIHVVR 214
           +++FG      LGH               H E QPR +  +  K           ++++ 
Sbjct: 231 LHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIID 290

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS--SLKSHLAVQVCARKR 272
            + G+ H VA+DS    Y+WG G  G LGH ++ D+ +P  +     ++   ++V     
Sbjct: 291 FACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSS 350

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +  + D GS+Y FG          ++   +  + P+ +  L   +++ I TG Y ++V+
Sbjct: 351 YSLAISDIGSLYLFG---------QNKKTGEANMYPKPVQDLAGWNITSIGTG-YTSIVI 400

Query: 333 TDRGRLFGFG 342
           +    L  +G
Sbjct: 401 SADDSLIAWG 410



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 34/238 (14%)

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T G N   QLGHGDT+    P  +A L +  +V+Q A G ++ L +T  G VY+ G   +
Sbjct: 129 TFGRNQLSQLGHGDTVTCEKPTQVADLADF-NVIQAACGRNHTLFLTDTGTVYACGDNKS 187

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
              G G +   +      ++   G  +++V  G E  V LD  G ++T+G    G LGH 
Sbjct: 188 GQCGVGNKLPTITSPTRISYN--GPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHN 245

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
              D       + +  H   Q     RK  V ++                    G    +
Sbjct: 246 --TDGRYFVNSTKMSFHFETQ----PRKVLVYMEKNK----------------EGHVLPI 283

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               I+D          + G  HTV +  + R + +G     +LGH   +  + P  I
Sbjct: 284 ENVNIID---------FACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLI 332


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 23/304 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q++ +E     + +SG+V+T   +S               P+LV+ L      ++ A 
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD-----------ALAPQLVQGLVSRNIVKIAAH 502

Query: 112 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 345 ERAQ 348
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 157 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 212
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G  V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 270
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671

Query: 331 VVTDRGRLFGFGDNERAQLGHDT 353
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVS 56
           + G ++  L +   V+S G    G LGHG      V        SA         VV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKLISAFCGKQAGQRVVHIA 558

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            L +   G V + G   +G+LG G +    TPK +  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 235 GKGYCGALGHGDEIDKTLPEP 255
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLHATKPEP 753



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P   A L  +G V QIA      L ++ +G VY+    S          D L P+ +Q  
Sbjct: 443 PIQCAGLASLG-VSQIACAEKRFLILSRSGRVYTQAYSS----------DALAPQLVQGL 491

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 264
             + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A 
Sbjct: 492 VSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAG 551

Query: 265 ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
              V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V  
Sbjct: 552 QRVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVID 608

Query: 322 IS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           ++  +G   T+ VT+ G+++ +GD +  +LG     GC  P    ++++++
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LVEKLQD 657


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 40/350 (11%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L ++   ++ G +  G LGHG +T Q    T ++  S   +++ S  +NH   V   G+ 
Sbjct: 85  LGADGRCYTWGRNEKGQLGHG-DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKA 143

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTA---GLNFTGFLT-IRGH-V 124
           F+ G N     G       I      E L  VPC   +VTA   G +FT +L+ + G  +
Sbjct: 144 FSFGHNKYGQLGTGSLRNEI------ETLP-VPCLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 125 HTCGSNTHGQLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            T G   +GQLGHG     +T D         +P P++IA L E  ++V++A G ++ +A
Sbjct: 197 LTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEK-TIVKVACGTNHTVA 255

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSS 228
           V  +G VY++G G    LGH EQ DE QPR ++ F++  +      VSAG          
Sbjct: 256 VDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGG 315

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G +Y WGK        GD  D   P+PL  L S   ++  A      V+    S   +G 
Sbjct: 316 GQLYMWGK----MKNTGD--DWMYPKPLMDL-SGWNIRCMASGNMHHVVGADDSCISWGA 368

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             +G LG+   G       P+ +DSL   HV+ +  G   ++++ DR ++
Sbjct: 369 AQYGELGYGPNGQKSSA-NPKKVDSLEGMHVTSVGCGYGMSLIIVDRAKI 417



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 39/313 (12%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +   G+ +T G N     GH DT +    P +V  L      + + G N T  +T 
Sbjct: 81  HCVALGADGRCYTWGRNEKGQLGHGDTVQRDL-PTIVSELSKYKIIKASIGKNHTVVVTD 139

Query: 121 RGHVHTCGSNTHGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            G   + G N +GQLG G   +     P P     + EV + V       ++ +V G+ +
Sbjct: 140 DGKAFSFGHNKYGQLGTGSLRNEIETLPVP---CLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 177 VYSFGSGSNFCLGHGEQHD--------------ELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           + + G      LGHG  ++              + +PRAI     K I  V+V+ G  H 
Sbjct: 197 L-TAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTI--VKVACGTNHT 253

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ----VCARKRKTFVLV 278
           VA+DSSG+VYTWG G  G LGH ++ D+  P  +   + +  +     V A         
Sbjct: 254 VAVDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTA 313

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             G +Y +G M         +   D  + P+ L  L   ++  +++G  H VV  D    
Sbjct: 314 GGGQLYMWGKM---------KNTGDDWMYPKPLMDLSGWNIRCMASGNMHHVVGADD-SC 363

Query: 339 FGFGDNERAQLGH 351
             +G  +  +LG+
Sbjct: 364 ISWGAAQYGELGY 376



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGH 244
            +G G Q + L P  ++     G+ +  V++G    H VAL + G  YTWG+   G LGH
Sbjct: 47  AVGGGIQGNLLSPSRLRPLV--GVDIRSVASGCTAFHCVALGADGRCYTWGRNEKGQLGH 104

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           GD + + LP  +S L  +  ++    K  T V+ D G  + FG   +G LG
Sbjct: 105 GDTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLG 155



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G  Y +G    G LG  D    D    P I+  L  + + + S G  HTVVVTD G+ F 
Sbjct: 89  GRCYTWGRNEKGQLGHGDTVQRD---LPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFS 145

Query: 341 FGDNERAQLGHDTLRGCLE--PTEIFIQEM 368
           FG N+  QLG  +LR  +E  P    + E+
Sbjct: 146 FGHNKYGQLGTGSLRNEIETLPVPCLVTEV 175


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+  S  
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + +SG+VF+ GD      GH +++R   RP      +G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPX-----QGEEVVQMSCGFKHSAV 4142

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4199

Query: 176  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4257

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317

Query: 295  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4318 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 13/263 (4%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 163
            +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V    
Sbjct: 4029 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
               + +A+T +G V+S+G G    LGHG    + +P        +G  VV++S G +H  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-------QGEEVVQMSCGFKHSA 4141

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 282
             + S G ++T+G G  G LG G+  +K LPE +++L+ +   QV C       V  D   
Sbjct: 4142 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4201

Query: 283  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            V+ FG   +G LG    G S     P+ +D L    + +++ G   +V +T  G ++ FG
Sbjct: 4202 VWAFGDGDYGKLGL---GNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4258

Query: 343  DNERAQLGHDTLRGCLEPTEIFI 365
             +    L     R    P +I +
Sbjct: 4259 QDRLIGLPEGRARNHNRPQQIPV 4281



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 18/320 (5%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P       +   VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVVQMS 4134

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4135 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4192

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4193 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4252

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4253 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4309

Query: 342  GDNERAQLGHDTLRGCLEPT 361
            G N   QLG        EPT
Sbjct: 4310 GSNSEGQLGLGHTNHVREPT 4329



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL---YHTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 348  QLGH 351
            +LGH
Sbjct: 4112 KLGH 4115


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 22/361 (6%)

Query: 4   TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           + G+Y T  + ++ S++  G +  G LG G    +      +     +    +S    H 
Sbjct: 479 SAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAP---VQVGGDSDWTSLSVGREHT 535

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             V   G ++  G N +   G  DT+      R+           V+AG  +T  +   G
Sbjct: 536 LAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSD---SDWATVSAGTGYTLAVKDDG 592

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N+HGQLG GDT +R  P  +A   +  +V   +AG  + LAV  +G ++++G 
Sbjct: 593 TLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAV---SAGSRHTLAVKNDGTLWAWGR 649

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            S+  LG G+  +   P  + +          VS G  H +A+ + G ++ WG+   G L
Sbjct: 650 NSDGQLGLGDTDNRDVPEQVGSD----TDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQL 705

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G GD  ++  PE +       AV   A  + T  + + G+++G+G   +G LG  D   +
Sbjct: 706 GLGDTDERHAPEQVGGDSDWAAV--TAGWQHTLAIKNDGTLWGWGLNLYGQLGLGD---T 760

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           D    P  + S      + ++ G YHT+ V D G L  +G N   QLG  T R   +P E
Sbjct: 761 DGRHAPMQVGS--DSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTYR-FDQPQE 817

Query: 363 I 363
           +
Sbjct: 818 V 818



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 167/367 (45%), Gaps = 31/367 (8%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPE---TTQCVSFTRINFPSAAHVVQVSAS 58
           +T G YHTL + ++ ++ + G +  G LG G     T+   + T  ++ +A      SA 
Sbjct: 428 VTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEADWAAA------SAG 481

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +     V   G ++  G N S   G  DT+    R   V+         ++ G   T  +
Sbjct: 482 QYQTQAVKADGSLWGWGRNHSGQLGLGDTDD---RHAPVQVGGDSDWTSLSVGREHTLAV 538

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G +   G N +GQLG GDT DR TP+ +    +  +V   +AG  Y LAV  +G ++
Sbjct: 539 KADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV---SAGTGYTLAVKDDGTLW 595

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S+  LG G+ ++   P  + +          VSAG  H +A+ + G ++ WG+  
Sbjct: 596 AWGRNSHGQLGLGDTNNRDAPVQVASDN----DWAAVSAGSRHTLAVKNDGTLWAWGRNS 651

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG GD  ++ +PE + S     AV   +    T  +   G+++ +G    G LG  D
Sbjct: 652 DGQLGLGDTDNRDVPEQVGSDTDWAAVSTGS--GHTLAVKTDGTLWAWGRNSDGQLGLGD 709

Query: 299 RGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              +D+   P  +  DS  A     ++ G  HT+ + + G L+G+G N   QLG     G
Sbjct: 710 ---TDERHAPEQVGGDSDWA----AVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDG 762

Query: 357 CLEPTEI 363
              P ++
Sbjct: 763 RHAPMQV 769



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +   G +   G N  GQLG GDT  R TP  +    +  +V   +AG +Y LAV  +G +
Sbjct: 138 MKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV---SAGGAYTLAVKDDGTL 194

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G+  D   P  + +        V VSAG  H +AL + G ++ WG+ 
Sbjct: 195 WAWGENYFGQLGLGDTDDRHAPEQVGSDS----DWVAVSAGRHHTLALKADGTLWAWGRN 250

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           Y G LG G   ++  PE + S        V    R +  + + G+++ +G    G LG  
Sbjct: 251 YFGQLGLGGTTNRNAPEQVGSHSDWAG--VIGGDRHSLAVREDGTLWSWGQNNVGQLGL- 307

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                D V R R          + +S GL HT+ V + G L+ +G N   QLG
Sbjct: 308 ----GDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLG 356



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 22/297 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ GR HTL + ++ +++  G +  G LG G +T    +  R+   S +    VSA   +
Sbjct: 528 LSVGREHTLAVKADGTLWGWGQNYNGQLGLG-DTDDRKTPERVG--SDSDWATVSAGTGY 584

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V   G ++  G NS    G  DTN    R   V+         V+AG   T  +   
Sbjct: 585 TLAVKDDGTLWAWGRNSHGQLGLGDTNN---RDAPVQVASDNDWAAVSAGSRHTLAVKND 641

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYMLAVTGNGVVY 178
           G +   G N+ GQLG GDT +R  P      E+VGS    AA   G  + LAV  +G ++
Sbjct: 642 GTLWAWGRNSDGQLGLGDTDNRDVP------EQVGSDTDWAAVSTGSGHTLAVKTDGTLW 695

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S+  LG G+  +   P  +            V+AG +H +A+ + G ++ WG   
Sbjct: 696 AWGRNSDGQLGLGDTDERHAPEQVGGDS----DWAAVTAGWQHTLAIKNDGTLWGWGLNL 751

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG GD   +  P  + S  S  A  V A +  T  + D G++  +G   FG LG
Sbjct: 752 YGQLGLGDTDGRHAPMQVGS-DSDWAT-VAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 25/351 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           ++ G  HTL + N  ++++ G +  G LG G    +      +   S      ++A + +
Sbjct: 328 VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAP---VQVGSDNDWAALNAGQRY 384

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V   G +++ G N     G  DT+    R    +   G+    VTAG+  T  +   
Sbjct: 385 SLAVKNDGSLWSWGWNDFGELGLGDTDD---RHAPEQVGGGMEWAAVTAGMYHTLGVKAD 441

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYS 179
           G +   G N  G+LG G  +        +PL+ V        +AG     AV  +G ++ 
Sbjct: 442 GTLRAWGRNDFGELGLGVMV-----YITSPLQTVTEADWAAASAGQYQTQAVKADGSLWG 496

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G   +  LG G+  D   P  +            +S G EH +A+ + G ++ WG+ Y 
Sbjct: 497 WGRNHSGQLGLGDTDDRHAPVQVGGDS----DWTSLSVGREHTLAVKADGTLWGWGQNYN 552

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG GD  D+  PE + S  S  A  V A    T  + D G+++ +G    G LG  D 
Sbjct: 553 GQLGLGDTDDRKTPERVGS-DSDWAT-VSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDT 610

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              D  ++    +   A     +S G  HT+ V + G L+ +G N   QLG
Sbjct: 611 NNRDAPVQVASDNDWAA-----VSAGSRHTLAVKNDGTLWAWGRNSDGQLG 656



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +   G ++  G N+    G  DT +   R    +         V+AG  +T  +  
Sbjct: 134 HTLAMKADGTLWAWGQNNVGQLGLGDTEK---RDTPAQVGSDTDWAAVSAGGAYTLAVKD 190

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVV 177
            G +   G N  GQLG GDT DR  P      E+VGS    V ++AG  + LA+  +G +
Sbjct: 191 DGTLWAWGENYFGQLGLGDTDDRHAP------EQVGSDSDWVAVSAGRHHTLALKADGTL 244

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G   +   P  + +          V  GD H +A+   G +++WG+ 
Sbjct: 245 WAWGRNYFGQLGLGGTTNRNAPEQVGSHS----DWAGVIGGDRHSLAVREDGTLWSWGQN 300

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG GD +++  PE + +  S  A  V A    T  + + G+++ +G  GFG LG  
Sbjct: 301 NVGQLGLGDTVERRRPEQVGN-DSDWAT-VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLG 358

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           D   +D    P  + S   +  + ++ G  +++ V + G L+ +G N+  +LG
Sbjct: 359 D---TDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELG 406



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++AG  H +A+ + G ++ WG+   G LG GD   +  P  + S     A  V A    T
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAA--VSAGGAYT 185

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             + D G+++ +G   FG LG  D   +D    P  + S  +  V+ +S G +HT+ +  
Sbjct: 186 LAVKDDGTLWAWGENYFGQLGLGD---TDDRHAPEQVGS-DSDWVA-VSAGRHHTLALKA 240

Query: 335 RGRLFGFGDNERAQLG 350
            G L+ +G N   QLG
Sbjct: 241 DGTLWAWGRNYFGQLG 256


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 340 GFGDNERAQLGH 351
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 341 FG 342
           FG
Sbjct: 312 FG 313



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 48/375 (12%)

Query: 2    QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 57
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1214

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 102
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G               
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAG 1273

Query: 103  -VPCK-------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 153
               C+       Q++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +A LE 
Sbjct: 1274 LCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 1333

Query: 154  -EVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--- 208
             ++G V  +A G ++ L V+ +G+ V++FG G    LG G    +  P+      +    
Sbjct: 1334 YQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 209  ----------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
                      GI + +V+ G +  VAL   G V+T+G+     L      +   P+ L +
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA 1453

Query: 259  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
            L       V      T  L  TG VY +G    G LG    G ++ V  P ++  L+  H
Sbjct: 1454 LSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGL---GHTNHVREPTVVTMLQGKH 1510

Query: 319  VSQISTGLYHTVVVT 333
            + Q+S G  H+   T
Sbjct: 1511 IHQVSAGRCHSAAWT 1525



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 46/361 (12%)

Query: 47   PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1149 PSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1207

Query: 107  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV--- 158
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EEV  V   
Sbjct: 1208 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRG 1267

Query: 159  -----------------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 201
                             +Q++ G  +   VT +G +++FG+G    LG G   ++  P  
Sbjct: 1268 RAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPER 1327

Query: 202  IQTFRRKGI-HVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLS-- 257
            +       I  V  V+ G  H + + + G  V+ +G G  G LG G+   K+ P+  +  
Sbjct: 1328 VAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVI 1387

Query: 258  ----SLKSHLAVQV-CARKRK--------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
                +L   L V V C    K        +  L   G V+ FG      +G P+    + 
Sbjct: 1388 LQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNH 1445

Query: 305  VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
              RP+ L +L   HV  ++ G  HT+ ++  G ++ +G N   QLG        EPT + 
Sbjct: 1446 N-RPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVT 1504

Query: 365  I 365
            +
Sbjct: 1505 M 1505



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 39/274 (14%)

Query: 124  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G+  HGQL   G  +  PT    AP        Q+  G +    +  NG V + G 
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPT---TAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 1178

Query: 183  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1179 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1238

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQV------------------------CARKRKTFVL 277
            LGHG+   +  P  + +L+    VQV                        C  K    V 
Sbjct: 1239 LGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVT 1298

Query: 278  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDR 335
             D G ++ FG   +G LG  +   S+K L  R+  L+  +   V+ ++ GL HT+VV+  
Sbjct: 1299 AD-GKLFTFGNGDYGRLGLGN--TSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSAD 1355

Query: 336  GRL---FGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
            G +   FG GD  +  LG+ T +   +   + +Q
Sbjct: 1356 GMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQ 1389



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1124 VFLWGAGRHGQLA---EAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 1180

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1181 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1237

Query: 348  QLGHDTLRGCLEPTEIFIQEMEE 370
            +LGH        P +I   + EE
Sbjct: 1238 KLGHGNSDRQRRPRQIEALQGEE 1260


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 20/330 (6%)

Query: 2    QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            QI  G+  T ++ N+ +V +CG    G LG G  +    S T I+      V Q++ S  
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQG-NSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H   V +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
            +T  G + T G+  +G+LG G T ++  P  +  LE  ++G V   A G ++ L V+ +G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV---ACGLNHTLCVSADG 2009

Query: 176  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
              V++FG G    LG G    +  P  I+    +G  + +V+ G +  VAL   G V+TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKAL--QGHVIKKVACGTQFSVALSKYGKVFTW 2067

Query: 235  GKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            G+     +G  D        P+ ++SL  +    V      T VL   G V+G+G    G
Sbjct: 2068 GQERL--IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEG 2125

Query: 293  SLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             LG      +  V  P+++  L   ++ Q+
Sbjct: 2126 QLGL--GHTNSPVREPQLVPCLTGKNIRQV 2153



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 13/316 (4%)

Query: 40   SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 99
            +F  +  PS +   Q+   +N    V  +G V  CG+ S    G  +++  +     + +
Sbjct: 1821 AFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDD-LHSLTAISS 1879

Query: 100  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
            ++G    Q+   +   G    +T  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1880 IQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1938

Query: 157  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
             V+Q++ G  +   VT +G +++FG+G    LG G   ++  P  +       I  V  +
Sbjct: 1939 EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV--A 1996

Query: 217  AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
             G  H + + + G  V+ +G G  G LG G+ + K LP  + +L+ H+  +V    + + 
Sbjct: 1997 CGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSV 2056

Query: 276  VLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L   G V+ +G      +G PD RG S+   +P+ + SL  + +  +  G  HT+V+T 
Sbjct: 2057 ALSKYGKVFTWGQERL--IGQPDTRGGSN--CQPQEVASLSGYFIEDVVCGAEHTLVLTS 2112

Query: 335  RGRLFGFGDNERAQLG 350
             G ++G+G N   QLG
Sbjct: 2113 DGDVWGWGSNSEGQLG 2128



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 218
            QI  G +    V  NG V + G GS   LG G   D     AI + +   +  +  S G 
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 219  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
            D H +A+  SG V++WG G  G LGHG+   +  P  + +L+    +Q+    + + V+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954

Query: 279  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG-R 337
              G ++ FG   +G LG    G +     P  + +L +H +  ++ GL HT+ V+  G  
Sbjct: 1955 ADGKLFTFGNGDYGRLGL---GTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTN 2011

Query: 338  LFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ FGD +  +LG     G   PT+I
Sbjct: 2012 VWAFGDGDFGKLGQGNTVGKHLPTKI 2037



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 214  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 270
            ++  G      + ++G V   G+G  G LG G+  D      +SS++  +  Q+      
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 271  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
               T  + ++G V+ +G   +G LG    G SD+  RPR +++L+   V Q+S G  H+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQLSCGFKHSA 1951

Query: 331  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            VVT  G+LF FG+ +  +LG  T      PT +   E
Sbjct: 1952 VVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALE 1988


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 146 PKSIAPLEEVGS-----------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 193
           P S +PLEE  +           V  ++ G  + LAV   G V+++G+GS   LG GE +
Sbjct: 25  PPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVK 84

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTL 252
                P+ I+T    GI +++VS GD H +AL   G V++WGK   G LG G E   +  
Sbjct: 85  GINFTPKKIKTL--TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDS 142

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P+ + SL+     QV A    +F L  +G+ +G+G    G L      V  +  +PR + 
Sbjct: 143 PQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG 202

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           +LR   V  IS G  HT V+T  G++F FGDN   QLGH
Sbjct: 203 ALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGH 241



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           VS  + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV+ G   
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
           +  L+  G V + G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGI-PLAQVAAGGAHSFALSV 169

Query: 174 NGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +G  + +G+ S   L   G+       +PR+I   R  G  V+ +S G EH   L  +G 
Sbjct: 170 SGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG--VIYISCGYEHTAVLTQNGK 227

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           V+T+G   CG LGH        P+ +  +   ++   C        +  TG V  FG
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 21/259 (8%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPL 152
           P  +  L+ +    V+ G   +  +  RG V   G+ + GQLG G+      TPK I  L
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIH 211
             +  ++Q++ G  + LA++  G V+S+G  S   LG G++   +  P+ +++   +GI 
Sbjct: 97  TGI-KIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL--EGIP 153

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVC 268
           + +V+AG  H  AL  SG  + WG    G L   G+   +    P  + +L++   + + 
Sbjct: 154 LAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYIS 213

Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKVLRPRILDSLRAHHVSQIST 324
                T VL   G V+ FG    G LG      DRG       P++++ +    VSQI  
Sbjct: 214 CGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG-------PQLVERIDG-LVSQIDC 265

Query: 325 GLYHTVV-VTDRGRLFGFG 342
           G YHT+  V   G++  FG
Sbjct: 266 GSYHTLAYVYTTGQVVSFG 284



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 17/240 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 59
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS  +
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG--EVKGINFTPKKIKTLTGIKIIQVSCGD 108

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 109 YHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALS 168

Query: 120 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           + G     G+N+ GQL   G+   +    P+SI  L  +G V+ I+ G  +   +T NG 
Sbjct: 169 VSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG-VIYISCGYEHTAVLTQNGK 227

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V++FG  S   LGH     +  P+ ++  R  G+ V ++  G  H +A     YVYT G+
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVE--RIDGL-VSQIDCGSYHTLA-----YVYTTGQ 279


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +++CG N++G+LG GD ++R    S++ L     + Q+ +G   +  +T  GVV + G
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVS-LCGWDDIRQVVSGNETLAVLTNEGVVLTCG 386

Query: 182 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
              +   G G   DE  +  R +Q  R + +  +  S G EH++AL  +G  Y+WG    
Sbjct: 387 LNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445

Query: 240 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LGH +   K  +P+ + SLK             + V+ D G +Y FG    G LG   
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDH 505

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              +     P+++ SL A  VS ++ GLYHT++ T  G LF  G N+  QLG    R   
Sbjct: 506 ---TQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIK 562

Query: 359 EPTEIFI 365
            PT + +
Sbjct: 563 LPTLVAL 569



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 18/290 (6%)

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           SG++++CG NS    G   T   I R +L  V        +QV +G      LT  G V 
Sbjct: 327 SGELYSCGQNSY---GELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVL 383

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAA--GPSYMLAVTGNGVVYSFG 181
           TCG N  GQ G G   +R     + P++ + S  V  IAA  G  +M+A+T  G+ YS+G
Sbjct: 384 TCGLNKSGQCGQGHFDERVM--MLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWG 441

Query: 182 SGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
                 LGH     ++  P+ I++ + K +    VS    H   +  +G +YT+G   CG
Sbjct: 442 YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSY--HHSAVITDAGELYTFGMNDCG 499

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG      ++ P+ + SL++     V      T +    G ++  G   +G LG     
Sbjct: 500 QLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGL---- 555

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             ++ ++   L +L    VS ++ G YH+VVV+  GR F FG N+  QLG
Sbjct: 556 AHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 158/358 (44%), Gaps = 15/358 (4%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           ++  ++SCG +  G LG G +  +    T ++      + QV +     A +   G V T
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERH-QLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLT 384

Query: 74  CGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGS 129
           CG N S  CG  H D    + RP  V+AL+    K + A  G      LT  G  ++ G 
Sbjct: 385 CGLNKSGQCGQGHFDERVMMLRP--VQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGY 442

Query: 130 NTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           N  GQLGH +   +   PK I  L++   +   +    +   +T  G +Y+FG      L
Sbjct: 443 NDRGQLGHENLATKIHVPKLIESLKD-KKLGFASVSYHHSAVITDAGELYTFGMNDCGQL 501

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G      +  P+ +++   +   V  V+ G  H +   ++G ++T GK   G LG     
Sbjct: 502 GLDHTQHQSTPQLVKSL--EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNR 559

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
              LP  L +L + +   V      + V+   G  + FG   +G LG   + V   V  P
Sbjct: 560 QIKLPT-LVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK-VHQNV--P 615

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
            ++       + + + G YHTV+++++G+++ FG N + QLG+      L P  + ++
Sbjct: 616 NVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVR 673



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 11/347 (3%)

Query: 2   QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 59
           Q+ +G     +++N  V  +CG +  G  G G    + +    +    +  V  ++AS  
Sbjct: 365 QVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNG 424

Query: 60  -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H   +  +G  ++ G N     GH +    I  P+L+E+LK       +   + +  +
Sbjct: 425 CEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVI 484

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G ++T G N  GQLG   T  + TP+ +  LE    V  +A G  + +  T  G ++
Sbjct: 485 TDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEAT-EVSMVACGLYHTIICTAAGELF 543

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           + G      LG         P  +         V  V+ G  H V + + G  +++G+  
Sbjct: 544 TCGKNDYGQLGLAHNRQIKLPTLVALPNE---MVSFVACGYYHSVVVSTGGRAFSFGRND 600

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G ++ + +P  ++   +   V+       T +L + G VY FG    G LG  +
Sbjct: 601 YGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLG--N 658

Query: 299 RGVSDKVLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           RG +D +L    ++     +     ++ G Y T ++ +R R    GD
Sbjct: 659 RGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDGD 705



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 23/238 (9%)

Query: 141 LDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 199
           L +  P S   LE  +  +  +   P Y      +G +YS G  S   LG G   D+++ 
Sbjct: 294 LMKQPPTSAVNLEMSIAKLAALKEQPMYG-KCEASGELYSCGQNSYGELGTG---DDIER 349

Query: 200 RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWG---KGYCGALGHGDEIDKTLPEP 255
             + +    G   +R V +G+E +  L + G V T G    G CG  GH DE    L  P
Sbjct: 350 HQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQ-GHFDERVMML-RP 407

Query: 256 LSSLKSHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           + +L+S     + A         L DTG  Y +G+   G LG     ++ K+  P++++S
Sbjct: 408 VQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGH--ENLATKIHVPKLIES 465

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD--------TLRGCLEPTEI 363
           L+   +   S   +H+ V+TD G L+ FG N+  QLG D         L   LE TE+
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEV 523


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 24/290 (8%)

Query: 90  PI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           PI F+  L   LK    +QV         +T    V++ G  + GQLGHGD   R  P S
Sbjct: 66  PIPFKIELPTILK---IRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTS 122

Query: 149 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           +  L+   S+ ++A G  + +  + NG+V + G GS  CLGHG+ H   +PR I+T    
Sbjct: 123 VEALK-GKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLL-- 179

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ- 266
            + V  +S G EHVV +   G ++ WGKG  G LG GDE D    EP+  +L+  + +Q 
Sbjct: 180 SVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEED--FCEPMEVTLRDPVFIQE 237

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVL----------RPRILDS 313
           V      T  L D G +   G   +  LG   R     S K +           P  + +
Sbjct: 238 VKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKA 297

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           L    V  +  G +H+ VV + G ++ FG N+  QLG    +    P ++
Sbjct: 298 LSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQV 347



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 24/343 (6%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
           +I  P+   + QV+ S  H A V     V++ G+ S    GH D + P   P  VEALKG
Sbjct: 70  KIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD-PRNVPTSVEALKG 128

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
               +V  G  F+ F +  G V TCG  + G LGHGD      P+ I  L  V  V  I+
Sbjct: 129 KSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV-DVTSIS 187

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            GP +++ V  +G ++++G G +  LG G++ D  +P  ++   R  + +  V  G +  
Sbjct: 188 CGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEP--MEVTLRDPVFIQEVKCGVDGT 245

Query: 223 VALDSSGYVYTWGKGYCGALGHG---------------DEID-KTLPEPLSSLKSHLAVQ 266
           + L   G +   G      LG                  E++ + +P  + +L     + 
Sbjct: 246 MFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLD 305

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           +      + V+V+ G VY FG    G LGF   G +     P  + ++    +S ++ G 
Sbjct: 306 MVVGPHHSAVVVEPGLVYMFGKNQHGQLGF---GNTKPREAPAQVQTMADKLISTVACGE 362

Query: 327 YHTVVVTDRGRLFGFGDNE-RAQLGHDTLRGCLEPTEIFIQEM 368
            +TV       L+ +G     +  G+D+ +  LE ++   QE+
Sbjct: 363 DYTVAGAMDNFLYLWGKGWLTSDPGNDSTQSSLELSQPKGQEV 405



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 98/252 (38%), Gaps = 45/252 (17%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           N  V +CG    G LGHG       S  R I    +  V  +S    H   V   G++F 
Sbjct: 147 NGIVMTCGDGSTGCLGHG--DYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFA 204

Query: 74  ----------CGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
                      GD   FC     T R P+F             ++V  G++ T FLT  G
Sbjct: 205 WGKGKDGRLGLGDEEDFCEPMEVTLRDPVF------------IQEVKCGVDGTMFLTDMG 252

Query: 123 HVHTCGSNTHGQLG----------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
            +  CGSN + +LG                  +   R  P ++  L +   V+ +  GP 
Sbjct: 253 CLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKF-RVLDMVVGPH 311

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           +   V   G+VY FG   +  LG G       P  +QT   K I    V+ G+++ VA  
Sbjct: 312 HSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIST--VACGEDYTVAGA 369

Query: 227 SSGYVYTWGKGY 238
              ++Y WGKG+
Sbjct: 370 MDNFLYLWGKGW 381


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 161/366 (43%), Gaps = 25/366 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L ++   ++ G +  G LG   + T     T    P  AHVV ++A  
Sbjct: 640 VALAAGDSHSLALRADGVAWAWGGNDQGQLG---DATTLERSTPAAVPGLAHVVALAAGN 696

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G   + G+N     G          P  V+       K V AG + +  + 
Sbjct: 697 AHSLVLHADGTSSSWGNN---AYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVR 753

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G+N  G+LG G  L RP P  +   + +GS V ++AG ++ LAV  +G V++
Sbjct: 754 SDGTVWAWGNNGSGELGDGTGLQRPRPVQV---QGLGSAVAVSAGTNHSLAVQSDGTVWA 810

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +G  S   LG G       P      R  G++ V+ VSAG  H +AL S G V+ WG  +
Sbjct: 811 WGGNSQGQLGDGTGITRYVP-----VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNF 865

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG      + +P  +  L     V + A    +  +   G+V+ +G+  +G LG   
Sbjct: 866 YGQLGDATSTQRLVPIQVPGLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGD-- 921

Query: 299 RGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
                K+ R P +     A  VS ++ G YH++ V   G ++ +G N   QLG  T    
Sbjct: 922 ---GTKIQRSPPVQVPGLAGMVS-VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQR 977

Query: 358 LEPTEI 363
           L P  I
Sbjct: 978 LLPVPI 983



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 23/365 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+L ++S+  V + G +  G LG G  T +   +T +   S   V  V A  
Sbjct: 190 VALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER---WTPVLVSSLTGVKSVVAGT 246

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  +   G V   G+N S   G    T RP+  P +V  L  V  + + AG   +  L
Sbjct: 247 FHSLALCSDGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTNV--QALAAGSAHSLAL 302

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G+N HGQ+G+G    + TP  +     VG +  IAAG ++ LA+  +G+ +
Sbjct: 303 RSDGTVRAWGNNDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAMRADGITW 359

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  S   LG G+   +L+P  +   R +    + +  G+ H +AL + G V+ WG   
Sbjct: 360 AWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNRHSLALHADGTVWAWGVNT 415

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G ++ +TLP  +  L       + A    +      G+V+ +G   FG LG   
Sbjct: 416 AGQLGDGTDLPRTLPVQVPGLAG--VHTLSATTSHSLAARADGTVWAWGDNAFGQLG--- 470

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G + + L P  +  L    V  +S+   H++ V+  G ++ +G N   +LG  T    L
Sbjct: 471 DGTTTQRLLPVQVPGLAG--VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRL 528

Query: 359 EPTEI 363
            P ++
Sbjct: 529 TPVQV 533



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 158/362 (43%), Gaps = 22/362 (6%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            +  G  H+L + S+ +V++ G++  G LG G   T       +        V VSA  NH
Sbjct: 742  VAAGGSHSLAVRSDGTVWAWGNNGSGELGDG---TGLQRPRPVQVQGLGSAVAVSAGTNH 798

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            +  V   G V+  G NS    G   T    + P  V  L GV    V+AG   +  L   
Sbjct: 799  SLAVQSDGTVWAWGGNSQGQLGD-GTGITRYVPVRVSGLNGV--MAVSAGSAHSLALRSD 855

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G V   G N +GQLG   +  R  P  +  L     VV IAAG  + LAV  +G V+++G
Sbjct: 856  GTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT---GVVSIAAGTHHSLAVRSDGTVWAWG 912

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                  LG G +     P  +Q     G+  V V+AG  H +A+ S+G V+ WG    G 
Sbjct: 913  YNFYGQLGDGTKIQRSPP--VQVPGLAGM--VSVAAGTYHSLAVHSNGTVWAWGYNNHGQ 968

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            LG G    + LP P+SS    +A    A    + V+   G+V+G+G      LG  D   
Sbjct: 969  LGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLG--DGST 1023

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
            SD   R     S   + V  IS+G  H++ +   G ++ +G     QLG   +   L P 
Sbjct: 1024 SD---RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPA 1080

Query: 362  EI 363
             +
Sbjct: 1081 GV 1082



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 155/355 (43%), Gaps = 22/355 (6%)

Query: 14  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 73
           ++ +V++ G +  G LG G  T + +    +  P  A V  VS+   H+  V + G V+ 
Sbjct: 454 ADGTVWAWGDNAFGQLGDGTTTQRLLP---VQVPGLAGVDTVSSMHQHSLAVSRDGTVWA 510

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N S   G   T      P  V  L  +    V AG   +  L   G V   G N++G
Sbjct: 511 WGFNGSGRLGD-GTTLSRLTPVQVPGLSSMVA--VAAGSTHSLALRADGTVWAWGDNSNG 567

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
            LG G TL R +P  +  L     VV +AAG  Y LAV   G V+++G      LG G  
Sbjct: 568 ALGDGTTLRRLSPVQVPGLS---GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTT 624

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
                PR   T       VV ++AGD H +AL + G  + WG    G LG    ++++ P
Sbjct: 625 ----TPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTP 680

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
             +  L +H+ V + A    + VL   G+   +G   +G LG    G S   L P  +  
Sbjct: 681 AAVPGL-AHV-VALAAGNAHSLVLHADGTSSSWGNNAYGQLG---DGTS--TLHPVPVQV 733

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
                +  ++ G  H++ V   G ++ +G+N   +LG  T  G   P  + +Q +
Sbjct: 734 PGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT--GLQRPRPVQVQGL 786



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 137/311 (44%), Gaps = 19/311 (6%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           QV+A   H+  +   G V+  GDN+    G   T      P  V++L  V    V  G  
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGD-GTGITQRLPVRVQSLDSVVALAV--GYQ 97

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  L   G V   G N  GQLG G       P  +  L     VV IAAG  + LA+  
Sbjct: 98  HSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLN---GVVAIAAGDHHSLALLS 154

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 232
           +G V+++G  +     HG+  D+    +    + +G+  VV +SAG  H +A+ S G V 
Sbjct: 155 DGSVWAWGYNA-----HGQLGDDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSDGKVK 209

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG  Y G LG G   ++  P  +SSL       V A    +  L   G+V  +G  G G
Sbjct: 210 AWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALCSDGTVRAWGENGSG 267

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            L     G+S    RP  +      +V  ++ G  H++ +   G +  +G+N+  Q+G+ 
Sbjct: 268 QL-----GISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNG 322

Query: 353 TLRGCLEPTEI 363
           T+   L P ++
Sbjct: 323 TISQQLTPVQV 333



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 23/374 (6%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  H+L++ S+ +V++ G +  G LG G   TQ +    +   S   VV ++    
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLP---VRVQSLDSVVALAVGYQ 97

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H+  +   G V+  GDN     G   D    +  P  V +L GV    + AG + +  L 
Sbjct: 98  HSLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVA--IAAGDHHSLALL 153

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N HGQLG   T+  P P  +  L     VV ++AG ++ LAV  +G V +
Sbjct: 154 SDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLS---GVVALSAGSTHSLAVLSDGKVKA 210

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG G   +   P  + +       V  V AG  H +AL S G V  WG+   
Sbjct: 211 WGDNYYGQLGDGSSTERWTPVLVSSL----TGVKSVVAGTFHSLALCSDGTVRAWGENGS 266

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG      + +P  +  L +  A+   A    +  L   G+V  +G    G +G    
Sbjct: 267 GQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQVG---N 321

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G   + L P  +  +    +  I+ G  H++ +   G  + +GD+ + QLG       L 
Sbjct: 322 GTISQQLTPVQVPGV--GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLR 379

Query: 360 PTEIFIQEMEEDTG 373
           P  +  Q +    G
Sbjct: 380 PARVLGQRIRMPLG 393



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 16/258 (6%)

Query: 95  RLVEALKGVPC--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           R+  AL   P   +QV AG   +  L   G V   G NT+GQLG G  + +  P  +  L
Sbjct: 27  RIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSL 86

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
           +   SVV +A G  + LA+  +G V+++  G NF    G+  D      IQ +   G  V
Sbjct: 87  D---SVVALAVGYQHSLALRSDGTVWAW--GDNFFGQLGDGSDAQSQVPIQVWSLNG--V 139

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           V ++AGD H +AL S G V+ WG    G LG    +   LP  +  L     V + A   
Sbjct: 140 VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG--VVALSAGST 197

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            +  ++  G V  +G   +G LG    G S +   P ++ SL    V  +  G +H++ +
Sbjct: 198 HSLAVLSDGKVKAWGDNYYGQLG---DGSSTERWTPVLVSSLTG--VKSVVAGTFHSLAL 252

Query: 333 TDRGRLFGFGDNERAQLG 350
              G +  +G+N   QLG
Sbjct: 253 CSDGTVRAWGENGSGQLG 270



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 145/358 (40%), Gaps = 33/358 (9%)

Query: 3   ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHVVQVSA 57
           I  G  H+L +    + ++ G    G LG G  + Q     V   RI  P       +  
Sbjct: 342 IAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP-------LGT 394

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              H+  +   G V+  G N++   G   T+ P   P  V  L GV     T   +    
Sbjct: 395 GNRHSLALHADGTVWAWGVNTAGQLGD-GTDLPRTLPVQVPGLAGVHTLSATTSHSLAA- 452

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
               G V   G N  GQLG G T  R  P  +  L  V +V  +     + LAV+ +G V
Sbjct: 453 -RADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMH---QHSLAVSRDGTV 508

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G   +  LG G     L P  +         +V V+AG  H +AL + G V+ WG  
Sbjct: 509 WAWGFNGSGRLGDGTTLSRLTPVQVPGLSS----MVAVAAGSTHSLALRADGTVWAWGDN 564

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             GALG G  + +  P  +  L     V + A    +  +   GSV+ +G+ G G LG  
Sbjct: 565 SNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLG-- 620

Query: 298 DRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
                D    PR+  +       V  ++ G  H++ +   G  + +G N++ QLG  T
Sbjct: 621 -----DGTTTPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDAT 673



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 113/260 (43%), Gaps = 19/260 (7%)

Query: 1    MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M ++ G  H+L L S+ +V++ G +  G LG    T + V    I  P    VV ++A  
Sbjct: 840  MAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVP---IQVPGLTGVVSIAAGT 896

Query: 60   NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            +H+  V   G V+  G N       G +    P   P  V  L G+    V AG   +  
Sbjct: 897  HHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP---PVQVPGLAGM--VSVAAGTYHSLA 951

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            +   G V   G N HGQLG G T  R  P    P+     V+  AA   + L V  +G V
Sbjct: 952  VHSNGTVWAWGYNNHGQLGDGTTTQRLLP---VPISSSSGVIAAAAN-WHSLVVRTDGTV 1007

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
            + +GS +   LG G   D    R + T       V  +S+G  H +AL S G V+ WG G
Sbjct: 1008 WGWGSNNASQLGDGSTSD----RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFG 1063

Query: 238  YCGALGHGDEIDKTLPEPLS 257
              G LG G    + +P  +S
Sbjct: 1064 NSGQLGDGVMSMRLVPAGVS 1083


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 160/368 (43%), Gaps = 35/368 (9%)

Query: 12  LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + +++S+ + G+   G LG G  E  + V    +N      V  V A   ++  +   G+
Sbjct: 1   MATHTSLIAWGAGEDGQLGIGINEEKEWVCV--VNALEPYKVRSVVAGSRNSLAICDDGK 58

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 131 THGQLGH--------GDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            +GQ G         G TL R    P+  AP      V Q+AAG ++ + +T  G V+++
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKL---VVRQVAAGGTHSVVLTREGHVWTW 175

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWG 235
           G                 P  I+      R +G+  V+ ++ G  H +AL   G ++ WG
Sbjct: 176 GQ-------------PWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWG 222

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LG
Sbjct: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           F D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+    
Sbjct: 283 FGDNDKSSKMV-PQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKV 341

Query: 356 GCLEPTEI 363
              +P E+
Sbjct: 342 TTGQPVEV 349



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 59
           Q+  G  H+++++    V++ G          P   + +S   R+       ++ V A  
Sbjct: 155 QVAAGGTHSVVLTREGHVWTWGQPWP------PGDIKQISVPVRVQGLEKVKLIAVGAFH 208

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           N A  + + G ++  G+N     G  DT +P  +P  V+ L G+    + AG   +  LT
Sbjct: 209 NLA--LQEDGTLWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265

Query: 120 IRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
             G V+  G   HG+LG GD     +  P+ +  L     +VQ++ G ++ +A+T +G +
Sbjct: 266 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE-DIVQLSCGGTHSVALTQDGRM 324

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQT 204
           +SFG G +  LG+G++    QP  + T
Sbjct: 325 FSFGRGDHGRLGYGKKVTTGQPVEVPT 351


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 354 LRGCLEPTEIFIQE 367
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   +G G   ++  PR I         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 297 PDRGVSDKVLRP 308
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N  GQ+G G T ++PTP+ I        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G  +    +  P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 141/301 (46%), Gaps = 17/301 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +  V+A +
Sbjct: 34  ISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEIFHVAAGD 90

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +  + +SG +F  G   N    C        +  P+L++ +      QV  G      
Sbjct: 91  FFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 118 LTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +   ++ +G 
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSGVLSPSGT 205

Query: 177 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    +G V++W
Sbjct: 206 LFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTRNGGVFSW 262

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG      L
Sbjct: 263 GHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQL 322

Query: 295 G 295
           G
Sbjct: 323 G 323



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 221
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 222 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 340 GFGDNERAQLGHDTLRGCLEPTEIF 364
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 136
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 137 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 195 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 252
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 13/230 (5%)

Query: 124 VHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
           ++  G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
                LG  +Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L
Sbjct: 58  NEFGQLG--QQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 243 G-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
               D + +  P+ L  +     VQV    +    L + G++  +G    G LG     +
Sbjct: 114 MCKQDSLHE--PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI 171

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             + L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 172 --EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 175
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            ++++G      LG+G  +  + P  +      RK   V  V+ G  H +AL  SG VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRK---VTEVACGSHHSMALTDSGEVYA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  L +L+   V Q+ +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I  ++
Sbjct: 269 NKSNQLSPVQIMTEK 283



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 9/288 (3%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVS-ASENH 61
           T+      + S+  V++ G +    LG G   +QC +   +++  S   VV +S  S  H
Sbjct: 29  TSANEAIYITSDDEVYAFGLNCSNCLGTGD--SQCTIVPKKVDILSGRKVVSLSYGSGPH 86

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 120
                + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT 
Sbjct: 87  ILLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +     +G+ V +V +G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQVVSGYAHSLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 264 QLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 9/156 (5%)

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           + P+ + T R+   +V   SA +   + + S   VY +G      LG GD     +P+ +
Sbjct: 13  MSPQELSTIRKA--YVFGTSANE--AIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKV 68

Query: 257 SSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SL 314
             L     V +        +L  + G ++ +G  G+  LG    G +++ + P ++  +L
Sbjct: 69  DILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG---NGTTNQGVAPVLVSATL 125

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               V++++ G +H++ +TD G ++ +G N   Q+G
Sbjct: 126 LNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVG 161


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 68  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 125

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 126 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 184

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 185 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 244

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 245 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 301

Query: 354 LRGCLEPTEIFIQE 367
               L PT+I +++
Sbjct: 302 KNNLLSPTQIMVEK 315



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 62  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 120

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 121 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 180

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 181 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 239

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 298

Query: 297 PDRGVSDKVLRP 308
              G  + +L P
Sbjct: 299 --TGSKNNLLSP 308



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 61  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 119

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 120 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 179

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 180 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 239

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 297

Query: 243 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 298 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 343



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 163 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 222

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 223 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 281

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 282 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 339

Query: 178 YSFG 181
           Y +G
Sbjct: 340 YMWG 343


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 354 LRGCLEPTEIFIQE 367
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 297 PDRGVSDKVLRP 308
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G  +    +  P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 21/357 (5%)

Query: 2   QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 59
           Q + G+  +L + +  V +S G++  G LG  P  +       R++ P+  H +Q+SA +
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPC-KQVTAGLNFTGF 117
           ++A  +  +  +++ G+N     G   ++ P   P +++ ++       QV+ G N+   
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 118 LTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTG 173
           +   G V++ G N+ GQLG   G T+    P +  P  L +   + Q+ AG    LA+  
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALAS 255

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G VYS+G  S+  LG      E   RA +     G++  ++SAG  H++A+DS G  Y+
Sbjct: 256 DGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDSDGNTYS 315

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG G     G        LP+    +++ L   + A    + V    G++Y +G    G 
Sbjct: 316 WGYG-----GTSQPSKVALPD---GIRTRL---ISAGHDYSLVTASDGNIYSWGDNSSGQ 364

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG  D G  +   +P    +      +Q   G  H + +   G L+G+GDN  +QLG
Sbjct: 365 LG-QDTG-GETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLG 419



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 34/314 (10%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGL 112
           Q SA ++ +  +   G +++ G+NS    G   T+  P  RP  V+   G    Q++AG 
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           ++   + I  H+++ G+N  GQ G G   +   P  + I  +    S VQ++ GP+Y+LA
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 171 VTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           V  +G VYS+G  S+  LG         +    P  +     KG+ + +V+AG +  +AL
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSL--PKGVKITQVTAGGKASLAL 253

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLAVQVCARKRKTFVLVD 279
            S G VY+WG    G LG       +  EP      +++       Q+ A  R    +  
Sbjct: 254 ASDGSVYSWGDNSSGQLGR----TPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDS 309

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G+ Y +G   +G    P +      +R R+           IS G  +++V    G ++
Sbjct: 310 DGNTYSWG---YGGTSQPSKVALPDGIRTRL-----------ISAGHDYSLVTASDGNIY 355

Query: 340 GFGDNERAQLGHDT 353
            +GDN   QLG DT
Sbjct: 356 SWGDNSSGQLGQDT 369



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 26/260 (10%)

Query: 99  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 158
           A+  +   Q +AG +F+  L   G +++ G+N+ GQLG        TP    P +  G V
Sbjct: 68  AIGDIRFSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGR-------TPTDSDPADRPGRV 120

Query: 159 --------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKG 209
                   +QI+AG  Y +A+  N  +YS+G+      G G      L P  +       
Sbjct: 121 DVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNAT 180

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-------PEPLSSLKSH 262
              V+VS G  +V+A+ S G VY+WG    G LG   E+  T+       P P+S  K  
Sbjct: 181 QSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLGR--EVGGTMTHYGPGNPNPVSLPKGV 238

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
              QV A  + +  L   GSVY +G    G LG      S+   R   + +    + SQI
Sbjct: 239 KITQVTAGGKASLALASDGSVYSWGDNSSGQLGR-TPSASEPANRAYKMTTADGMNFSQI 297

Query: 323 STGLYHTVVVTDRGRLFGFG 342
           S G  H + V   G  + +G
Sbjct: 298 SAGYRHILAVDSDGNTYSWG 317



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 30/336 (8%)

Query: 31  HGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVL---QSGQVFTCGDNSSFCCGHRD 86
            GP+T  Q V  T    P     ++ S  ++ A F L     G +++ G N  +  GH  
Sbjct: 583 EGPQTGGQSVKLTP---PQGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGHTT 639

Query: 87  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPT 145
           +++P+    +VE   GV   Q  AG  F   L   G+V+T G+NT+ QLG      +   
Sbjct: 640 SDKPV----VVETPAGVRYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNA 695

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           P  + P   +    ++ AG  + LA+  +G +Y++G  S   LG G      +   ++  
Sbjct: 696 PDKVTPPAGI-HYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQGRIGATSR-NPLRVV 753

Query: 206 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
             +GI   +V  G   +HV+AL S G +Y+WG      LG            L++L   L
Sbjct: 754 APEGITFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNA-------LTALGDPL 806

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH------ 317
             +V A    TF    TG  +        +L     G+  ++   +++    ++      
Sbjct: 807 PGKVQAPAGITFTQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMISMYPSNVIMPSG 866

Query: 318 -HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            + ++   G Y  +     G L+ +G N+  QLG D
Sbjct: 867 INFTRFVAGRYFAIAAGSDGNLYSWGYNDYGQLGRD 902



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 36/285 (12%)

Query: 98  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP----TPKSIAPLE 153
           +  +G+    + +G +F+  L   G++++ G N   QLGH  T D+P    TP  +    
Sbjct: 598 QGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGH-TTSDKPVVVETPAGV---- 652

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQH---DELQPRAIQTFRR 207
                 Q AAG  + LA+  +G VY++G+ +   LG    G  H   D++ P A      
Sbjct: 653 ---RYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAPDKVTPPA------ 703

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----SHL 263
            GIH  RV AGD   +AL S G +Y WG    GALG G  I  T   PL  +     +  
Sbjct: 704 -GIHYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQG-RIGATSRNPLRVVAPEGITFT 761

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS---DKVLRPRILDSLRAHHVS 320
            V      +    L   G++Y +G+     LG     ++   D +  P  + +      +
Sbjct: 762 QVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFT 819

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           Q STGL  ++ +     L+ +G+  ++QLG+  +   + P+ + +
Sbjct: 820 QASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMI-SMYPSNVIM 863



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVS 56
           +QI+ G  + + I  N  ++S G++  G  G G  ++  +   ++  PS       VQVS
Sbjct: 129 LQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV-IPSVNATQSFVQVS 187

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGL 112
              N+   V   G V++ GDNSS   G       T+     P  V   KGV   QVTAG 
Sbjct: 188 TGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGG 247

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 171
             +  L   G V++ G N+ GQLG   +   P  ++       G +  QI+AG  ++LAV
Sbjct: 248 KASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAV 307

Query: 172 TGNGVVYSFGSG-----SNFCLGHGEQ-------HD------------------------ 195
             +G  YS+G G     S   L  G +       HD                        
Sbjct: 308 DSDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIYSWGDNSSGQLGQ 367

Query: 196 ----ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
               E   +  +     G+   +  AG  H++A+ S GY+Y WG      LG G
Sbjct: 368 DTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLGTG 421



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           G+T    TP +I  +       Q +AG  + LA+   GV+YS+G+ S   LG      + 
Sbjct: 58  GNTTATLTPPAIGDIR----FSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDP 113

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EP 255
             R  +     G H +++SAGD++ VA+D + ++Y+WG    G  G G     +LP  + 
Sbjct: 114 ADRPGRVDVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV 173

Query: 256 LSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-----RPR 309
           + S+ +  + VQV         +   G+VY +G    G LG   R V   +       P 
Sbjct: 174 IPSVNATQSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLG---REVGGTMTHYGPGNPN 230

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +   +   ++Q++ G   ++ +   G ++ +GDN   QLG
Sbjct: 231 PVSLPKGVKITQVTAGGKASLALASDGSVYSWGDNSSGQLG 271



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 14/247 (5%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV--SASENHAAFVLQSG 69
           L S+ ++++ G +  G LG G       +  R+  P      QV    S  H   +   G
Sbjct: 720 LGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDG 779

Query: 70  QVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
            +++ G + SF  G +         P+  P  V+A  G+   Q + GLNF+  L    ++
Sbjct: 780 NLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFTQASTGLNFSLALGSDNNL 837

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           ++ G+    QLG+   +       I P     +  +  AG  + +A   +G +YS+G   
Sbjct: 838 YSWGNGLKSQLGNAQMISMYPSNVIMPSGI--NFTRFVAGRYFAIAAGSDGNLYSWGYND 895

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
              LG       +  P  ++     GI +++  AGD H  A+ S G  Y+WGK   G LG
Sbjct: 896 YGQLGRDISDKSDYMPTKLEA--PAGITLIQPQAGDNHSSAIGSDGNTYSWGKSADGVLG 953

Query: 244 HGDEIDK 250
                D+
Sbjct: 954 RDTSGDQ 960


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 19/262 (7%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYM-LAVTGNGVVYS 179
           + + G    GQ GHGD  D   PK +  L ++G    +VQ+AAG   + L +  +G V S
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLL--LGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLS 61

Query: 180 FGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           FG+     LGHG     +  D L+PR I   + +   V+ VSAG+ H   + + G VYTW
Sbjct: 62  FGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNE--KVICVSAGELHSGCVTADGDVYTW 119

Query: 235 GKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G+G+CG LG GD     LPE   L  L+      +    R T V+ + G V+ +G   +G
Sbjct: 120 GEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYG 179

Query: 293 SLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            L   +  + D   +  P+++D+L A     +S G  H++V+ + G L+ FG      LG
Sbjct: 180 VLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALG 239

Query: 351 HDTLRGCLEPTEIFIQEMEEDT 372
           H  L G   P ++   + EE+ 
Sbjct: 240 HGDLVGQEFPVKVM--QFEENN 259



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 21/312 (6%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPSAAHVVQVSASENH 61
           G+   +L  +  V S G++  G LGHG     + + C+    I+      V+ VSA E H
Sbjct: 47  GQLDLMLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELH 106

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLT 119
           +  V   G V+T G+      G  D  RP   P  V    L+      ++ G   T  +T
Sbjct: 107 SGCVTADGDVYTWGEGFCGQLGLGD-RRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVT 165

Query: 120 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPL-EEVGS--VVQIAAGPSYMLAVTGNG 175
             G V + G   +G L   + TLD P+ +    L + +G+   V ++AG  + + +  +G
Sbjct: 166 EEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHG 225

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            +Y+FGSG++  LGHG+   +  P  +  F    + + ++SAG +  +A+ ++G VY WG
Sbjct: 226 GLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWG 285

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGF--- 291
           K   G +G G+  D  LP  +    ++   V V      + ++   GSVY  G +G    
Sbjct: 286 KAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCGGVGVDGK 345

Query: 292 ------GSLGFP 297
                 G  GFP
Sbjct: 346 DDGQNTGGDGFP 357


>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
 gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
          Length = 498

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 165/393 (41%), Gaps = 58/393 (14%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           VF+ G+     LG GPE    V   R++   +  +V ++    H   +   G+V++ G N
Sbjct: 90  VFAFGTGDMCELGLGPEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGN 149

Query: 78  SSFCCGHRDTNRPIFR------------PRLVEALKGVPC--------KQVTAGLNFTGF 117
                G   +   + +            P+L  A + +P          ++ A  + +  
Sbjct: 150 DLGALGRDTSGHEVLKDMDADESDDEDDPKLNPA-ESIPALVDTDQRFVKIEASDSLSLA 208

Query: 118 LTIRGHVHTCGS--NTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           LT  G V   GS  N+ G +G  D +   +RP       +EE+ ++  IAAG  ++LA+T
Sbjct: 209 LTAEGDVWAWGSFRNSQGTMGFSDKVKVQNRPVK-----IEELSNIAAIAAGRDHVLALT 263

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYV 231
             G V+++G   NF LG       L PR +      G+ ++V V AG+ H  A+D+ G V
Sbjct: 264 QWGTVHTWGDSENFRLGWKSNRSTLSPREL------GLKNIVYVGAGEFHSFAIDTDGKV 317

Query: 232 YTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
             WG    G CG LG  D      P  + +L     V V   +  +  L   G+VY FG 
Sbjct: 318 LAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHSLALSKDGTVYSFGR 377

Query: 289 MGFGSLGF-----PDRGVSDKVLRPRIL------------DSLRAHHVSQISTGLYHTVV 331
             +  +GF     P+  V D    PR L            D  +   +  I+ G +H+++
Sbjct: 378 YDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGEDDDEKLPKMRFIACGAHHSLI 437

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           +   GR++ +G +   Q GH        P +I 
Sbjct: 438 IDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIM 470



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 50/263 (19%)

Query: 142 DRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQHDE 196
           ++P P + AP     S +Q      P+ +   + N V   V++FG+G    LG G     
Sbjct: 50  EKPIPAAKAPSRLRLSAIQRKHKHSPTLLPLPSINKVDCEVFAFGTGDMCELGLG----- 104

Query: 197 LQPRAIQTFRRKGI------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDE 247
             P    T +R  +       +V ++ G +H + LDS G V++WG    GALG    G E
Sbjct: 105 --PEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGNDLGALGRDTSGHE 162

Query: 248 IDKTLP------------EPLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWM- 289
           + K +              P  S+ + +      V++ A    +  L   G V+ +G   
Sbjct: 163 VLKDMDADESDDEDDPKLNPAESIPALVDTDQRFVKIEASDSLSLALTAEGDVWAWGSFR 222

Query: 290 -GFGSLGFPDRGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
              G++GF     SDKV    RP  ++ L   +++ I+ G  H + +T  G +  +GD+E
Sbjct: 223 NSQGTMGF-----SDKVKVQNRPVKIEEL--SNIAAIAAGRDHVLALTQWGTVHTWGDSE 275

Query: 346 RAQLGHDTLRGCLEPTEIFIQEM 368
             +LG  + R  L P E+ ++ +
Sbjct: 276 NFRLGWKSNRSTLSPRELGLKNI 298



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 26/243 (10%)

Query: 3   ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  GR H L ++   +V + G S    LG        +S   +      ++V V A E H
Sbjct: 252 IAAGRDHVLALTQWGTVHTWGDSENFRLGW-KSNRSTLSPRELGL---KNIVYVGAGEFH 307

Query: 62  AAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  +   G+V   G N    CG   +  N  +  P  V+AL G     VT G + +  L+
Sbjct: 308 SFAIDTDGKVLAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHSLALS 367

Query: 120 IRGHVHTCGSNTHGQLG-------HGDTLDR---------PTPKSIA---PLEEVGSVVQ 160
             G V++ G   + Q+G        G   D          P+P S+      E++  +  
Sbjct: 368 KDGTVYSFGRYDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGEDDDEKLPKMRF 427

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           IA G  + L +  +G V+++G  S+F  GH E+ D   PR I     K I V     G +
Sbjct: 428 IACGAHHSLIIDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIMNTAIKPIDVKMAGGGGQ 487

Query: 221 HVV 223
             V
Sbjct: 488 FSV 490


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 354 LRGCLEPTEIFIQE 367
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 297 PDRGVSDKVLRP 308
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G  +    +  P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD     TPK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++DTG VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L PT I +++
Sbjct: 269 NKNNLLSPTHIMVEK 283



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V +  +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTEDDEVFVFGLNYSNCLGTGD-NQSTLTPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDTGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+ +++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV   G VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDTGEVYGWGYNGNGQLG-LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPTHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 42  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 101
           TR++F     +V V+     +A +    +VFT G  S    GH + +   + PR V AL 
Sbjct: 257 TRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE-WLPRSVAALH 315

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLE 153
            +P  QV  G      L++ G V+T G   HGQLGHGD     TPK +          + 
Sbjct: 316 HIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVA 375

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
           +VGS V +A G S  L +T  G + SFG      LG GE+    +P  I +        V
Sbjct: 376 DVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFV 435

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +SAGDEH  A+ S G VYTWG+G  GA+G
Sbjct: 436 HLSAGDEHCAAVTSKGNVYTWGQGCFGAVG 465



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 149 IAPLEEVGSVVQIAAGPSYM-LAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTF 205
           +A L       ++ +GPS + L    +  +Y F  G   N+ LG G+   +  P+ + T 
Sbjct: 149 VAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTL 208

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
            R G  ++ VS G +H  A+DS+G ++TWG    G LG     D   P  +  LK  + V
Sbjct: 209 TRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIV 268

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            V      +  +     V+ +G    G LG  ++  SD+ L PR + +L    + Q++ G
Sbjct: 269 DVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEK--SDEWL-PRSVAALHHIPIVQVALG 325

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 373
             H   ++  G ++ +G+ E  QLGH  L  C  P ++ + E+E  TG
Sbjct: 326 YEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLL-ELENTTG 372



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 22/309 (7%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQ 107
           ++ VS   +H A +  +G++FT G      C H      + + +  P  V+ LK      
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWG-----LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVD 269

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           VT G+  +  ++    V T GS + GQLGH +  D   P+S+A L  +  +VQ+A G  +
Sbjct: 270 VTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHI-PIVQVALGYEH 328

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-------HVVRVSAGDE 220
           M A++ +G VY++G G +  LGHG+ +    P+ +                 V ++ G  
Sbjct: 329 MAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGAS 388

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLV 278
             + L   G + ++G    GALG G++     P  ++S  +     V + A       + 
Sbjct: 389 VTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVT 448

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
             G+VY +G   FG++G P R          +P  L+          S G  +TV+++  
Sbjct: 449 SKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKD 508

Query: 336 GRLFGFGDN 344
           G +   GD+
Sbjct: 509 GCVLVLGDD 517



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 118/281 (41%), Gaps = 55/281 (19%)

Query: 94  PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           P+LV  L   G     V+ G +    +   G + T G   HG+LG     D P P  +  
Sbjct: 202 PKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDF 261

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           L++   +V +  G      ++ +  V+++GSGS   LGH E+ DE  PR++       I 
Sbjct: 262 LKD-EVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHH--IP 318

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           +V+V+ G EH+ AL   G VYTWG+G  G LGHGD                  +  C+  
Sbjct: 319 IVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD------------------LNSCSTP 360

Query: 272 RKTFVLVD--TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
           +K  + ++  TG V   G                    P +L           + G   T
Sbjct: 361 KKLLLELENTTGEVADVG-------------------SPVLL-----------ACGASVT 390

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
           +++TD GRL  FG +E   LG    R    P  I  + M++
Sbjct: 391 LILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDK 431


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE++       ++ G
Sbjct: 259 VNQIVCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESISVTIVDFISCG 317

Query: 112 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 318 EFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGL-QVLFVACGSWHS 376

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 227
             +T  G +Y+FG G+   LGHG +     P+ ++     G   ++V+ G  H  A+   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEAL--NGFRTIKVACGVWHSAAIVEA 434

Query: 228 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                    S  +YTWG G    LG GD+  + +P  + +L  H   Q+   +  T  L 
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALA 494

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 495 TSGHVYTMGSSDNGQLGNPKSDGKQPCL---VKDKLAHELVEEISCGAAHVAVLTSRSEV 551

Query: 339 FGFGDNERAQLGHDTLRGCLEPT 361
           + +G     +LGH  L     PT
Sbjct: 552 YTWGMGANGRLGHGDLNDKKAPT 574



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 261 QIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDF------- 313

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 110
            +S  E H   +  SG +F  GD S      G+ DT    + P+ V   L+G+    V  
Sbjct: 314 -ISCGEFHTCAISASGDLFNWGDGSYHAGLLGY-DTGASHWLPKRVSGPLEGLQVLFVAC 371

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +  +T  G ++T G  T G LGHG+      PK +  L      +++A G  +  A
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGF-RTIKVACGVWHSAA 430

Query: 171 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +      TG  +V    Y++G G    LG G++   L P  +Q       H  +++ G  
Sbjct: 431 IVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFH--QLACGQN 488

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             VAL +SG+VYT G    G LG+     K        L   L  ++        VL   
Sbjct: 489 MTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSR 548

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 549 SEVYTWGMGANGRLGHGD--LNDKKA-PTIVEALKDRHVKSISCGSNFTTCI 597



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 16/293 (5%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 245 VLIPKPLESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 304

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 208
            +  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 305 SI-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRV-SGPLE 362

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     ++V 
Sbjct: 363 GLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVA 422

Query: 269 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
                +  +V+     G        + W G G      +G  +  L P  + +L  H+  
Sbjct: 423 CGVWHSAAIVEATVQTGMNMVSKKLYTW-GDGDKNRLGQGDKEARLIPTCVQALLEHNFH 481

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 370
           Q++ G   TV +   G ++  G ++  QLG+   D  + CL   ++  + +EE
Sbjct: 482 QLACGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEE 534


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 13/276 (4%)

Query: 1   MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ +++ S VF+ G  L G LGHG  +     F  +       +  +    
Sbjct: 94  VQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFL-VKGLQGKGIKSIGCGY 152

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI----FRPRLVEALKGVPCKQVTAGLNFT 115
            +   +  +G+V   G  +S   G+ D +  I    + P  +++L      Q T G NF+
Sbjct: 153 ENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFS 212

Query: 116 GFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLA 170
            FL+  G +++ G   +GQLG      ++L+ P   ++  +   G  V+ ++ G S+ LA
Sbjct: 213 MFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLA 272

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           ++ +G+VYS+GSG N+ LGHG   D   P+ +          V VSAG  H  A+ ++G 
Sbjct: 273 LSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEAD--PCVSVSAGGYHSAAVSATGR 330

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
           +YTWG+ + G LG G  ID    + +  L + + ++
Sbjct: 331 IYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVILK 366



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 13/342 (3%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V+SCG    G LG   E  +      +       V  ++    H   + ++G+V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
            S   GH   +   + PR + AL+ V   Q+ AG + +  LT R  V T G   HGQLGH
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGH 125

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           GD  D   P  +  L+  G +  I  G     A+TG G V  FGS ++  LG+G+    +
Sbjct: 126 GDVSDVWFPFLVKGLQGKG-IKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGI 184

Query: 198 QPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
                   + K +    +++ + G    + L  +G +Y+ G    G LG   E  ++L  
Sbjct: 185 GGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNL 244

Query: 255 PLS------SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
           P +      S K      V      +  L + G VY +G     +LG    G ++    P
Sbjct: 245 PYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALG---HGGTEDTFTP 301

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +++  L A     +S G YH+  V+  GR++ +G N   QLG
Sbjct: 302 KMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLG 343



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RKGIHVVRVSAGDEHVVALDSSGYV 231
           VYS G G+   LG  ++      RA   F       + + V  ++ G +H + L  +G V
Sbjct: 6   VYSCGHGAGGRLGLNDE------RARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKV 59

Query: 232 YTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           Y+WG       GHG +++    P  + +L++   VQ+ A +  +  L D   V+ +G   
Sbjct: 60  YSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGL 119

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G LG  D  VSD V  P ++  L+   +  I  G  +T  +T  G++ GFG     +LG
Sbjct: 120 HGQLGHGD--VSD-VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLG 176

Query: 351 HDTLRG 356
           +  + G
Sbjct: 177 NGDVDG 182


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 141/301 (46%), Gaps = 17/301 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +  V+A +
Sbjct: 34  ISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEIFHVAAGD 90

Query: 60  NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             +  + +SG +F  G   N    C        +  P+L++ +      QV  G      
Sbjct: 91  FFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 118 LTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +   ++ +G 
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSGVLSPSGT 205

Query: 177 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    +G V++W
Sbjct: 206 LFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTRNGGVFSW 262

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG      L
Sbjct: 263 GHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQL 322

Query: 295 G 295
           G
Sbjct: 323 G 323



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 221
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 222 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 340 GFGDNERAQLGHDTLRGCLEPTEIF 364
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 136
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 137 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 195 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 252
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 253 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 312
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 313 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 128 GSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS    
Sbjct: 5   GKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNE-- 59

Query: 187 CLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-H 244
             G  G+Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L   
Sbjct: 60  -FGQLGQQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCK 116

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
            D + +  P+ L  +     VQV    +    L + G++  +G    G LG     +  +
Sbjct: 117 QDSLHE--PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI--E 172

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 173 FLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|34098426|sp|Q7ZZC8.1|NEK9_XENLA RecName: Full=Serine/threonine-protein kinase Nek9; Short=xNek9;
           AltName: Full=Nercc1 kinase; AltName: Full=Never in
           mitosis A-related kinase 9; Short=NimA-related protein
           kinase 9
 gi|30523244|gb|AAP31900.1| NIMA-family kinase Nercc1 [Xenopus laevis]
          Length = 944

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   SV +++ G  + + +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 315
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 253
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 34/304 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           +++ G   T+ I++   ++S GS   G LG      ++ +    ++F     V QVS  +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +H   + +S  V++ G      CG       D+   ++ P+ VE  +G+    V  G + 
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
            A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 276 VLVD 279
           ++V+
Sbjct: 704 LIVE 707


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 152/342 (44%), Gaps = 18/342 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 59
           I  G+Y T  +S + +V +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 118
            H   V   G+VF+ GD      GH ++    + P++++  L G     V+AG   +  +
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY-PKIIQGPLLGKVVVCVSAGYRHSAAV 524

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 177
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G +V
Sbjct: 525 TNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG---QVACGSSHTIAVAQDGRIV 581

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 639

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            C   G   E     P  +  L     + +         L     V+ +G    G  G  
Sbjct: 640 SCLGCG-SSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCG-- 696

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 335
               S  V +P+ +  L    + QI+ G  H    T V TDR
Sbjct: 697 QGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDR 738



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+  G NSS       T   I +P+L +       + + AG   T  ++  G V  CG  
Sbjct: 372 VYVWGSNSSHQLAE-GTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKG 428

Query: 131 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           ++G+LG GD+ ++  PK +   P   +  V        + LAVT  G V+S+G G    L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG    +  P+ IQ     G  VV VSAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 489 GHGNSATQKYPKIIQG-PLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSH 547

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            + +P  +  + S +    C       V  D   V+ FG    G LG    G +++V RP
Sbjct: 548 SRNVPTLVKDI-SGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG---HGDTNRVYRP 603

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 604 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 637



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 25/293 (8%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 124
           G V  CG  S    G  D+N      +LV      ++ V   + + G   T  +T  G V
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDG--HTLAVTAEGEV 477

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS 182
            + G   +G+LGHG++  +  PK I  PL  +G VV  ++AG  +  AVT +G +Y++G 
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKIIQGPL--LGKVVVCVSAGYRHSAAVTNDGELYTWGE 535

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGA 241
           G    LGH + H     R + T  +    V +V+ G  H +A+   G  V+++G G  G 
Sbjct: 536 GDFGRLGHSDSHS----RNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGK 591

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPD 298
           LGHGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS     
Sbjct: 592 LGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS----- 646

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
                  LRPR+++ L    +  IS G  H + ++    +F +G+N   Q G 
Sbjct: 647 --SETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQ 697



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 30/247 (12%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 163
            +QV  G N T  +   G V   G  ++G+LG G++ D  TP  I+ L+   V  +V    
Sbjct: 3893 QQVVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
               + LA+T  G V+S+G G    LGHG    + +P+ I+    +G  VV+++ G +H  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGL--QGEEVVQLACGFKHSA 4010

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
             + + G ++T+G G  G LG     +K +PE +++L  H                     
Sbjct: 4011 VVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHH-------------------- 4050

Query: 284  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
                 +G   +G PD  + +   RP+I+ +L    +  I+ G  H + +++ G ++ +G 
Sbjct: 4051 -----IGQRLIGLPDAMLKNHN-RPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGC 4104

Query: 344  NERAQLG 350
            N  AQLG
Sbjct: 4105 NCEAQLG 4111



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 11/194 (5%)

Query: 173  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            G   VY +G+G      HG+  D     ++ T         +V  G      + ++G V 
Sbjct: 3858 GKSEVYLWGNGR-----HGQLADAGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVL 3912

Query: 233  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR---KRKTFVLVDTGSVYGFGWM 289
              G+G  G LG G+  D   P  +S+L+ ++  Q+         +  L +TG V+ +G  
Sbjct: 3913 AVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDG 3972

Query: 290  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             +G LG    G S++  RP+ ++ L+   V Q++ G  H+ VVT  G+LF FG  +  +L
Sbjct: 3973 DYGKLG---HGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRL 4029

Query: 350  GHDTLRGCLEPTEI 363
            G  +    + P  +
Sbjct: 4030 GQRSTSNKMIPERV 4043



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
            Q+  G+  T L+ +N +V + G    G LG G  +    + T I+      V Q+  S  
Sbjct: 3894 QVVCGQNCTFLVQANGTVLAVGEGSYGRLGQG-NSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 59   -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
             + H+  + ++G+VF+ GD      GH ++ R   RP+ +E L+G    Q+  G   +  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAV 4011

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            +T  G + T GS   G+LG   T ++  P+ +  L+      ++   P  ML        
Sbjct: 4012 VTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAML-------- 4063

Query: 178  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
                          + H+  +P+ I     +G+ +  ++ G EH++AL ++G VY WG  
Sbjct: 4064 --------------KNHN--RPQIIPAL--EGVFIEDIAVGCEHILALSNTGDVYAWGCN 4105

Query: 238  YCGA---LGHGDEIDKTL 252
             C A   LGH + + + +
Sbjct: 4106 -CEAQLGLGHSNPVKEPI 4122



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
            VY WG G  G L        ++P    SL      QV   +  TF++   G+V   G   
Sbjct: 3862 VYLWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGS 3918

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD +  P I+ +L+ + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3919 YGRLG---QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYG 3975

Query: 348  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            +LGH        P +I   + EE   LA
Sbjct: 3976 KLGHGNSERQRRPKQIEGLQGEEVVQLA 4003



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 100/261 (38%), Gaps = 38/261 (14%)

Query: 9    HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
            H+L ++ +  VFS G    G LGHG    Q     +I       VVQ++    H+A V  
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014

Query: 68   SGQVFTCGDNSSFCCGHRDTNRPIF----------------------------RPRLVEA 99
             G++FT G   S   G R T+  +                             RP+++ A
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPA 4074

Query: 100  LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
            L+GV  + +  G      L+  G V+  G N   QLG G +     P  +  L+   ++ 
Sbjct: 4075 LEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQG-KNIR 4133

Query: 160  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE----QHDELQ---PRAIQTFRRKGIHV 212
            QI+AG  +  A T   +       S   LG  +    Q++ L+   P  + T  R   H 
Sbjct: 4134 QISAGRCHSSAWTTPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLNTRLRVLYHF 4193

Query: 213  VRVSAGDEHVVALDSSGYVYT 233
              +      ++ LD    V T
Sbjct: 4194 SDLMYKSWRLLNLDPRSQVST 4214



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           VY WG      L  G  ++K L   L+   S  A  + A +  TF +   G+V   G   
Sbjct: 372 VYVWGSNSSHQLAEGT-LEKILQPKLAQGFSD-AQMIEAGQYCTFSVSADGAVKACGKGS 429

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY-HTVVVTDRGRLFGFGDNERAQL 349
           +G LG  D   +  + +  +L+  R       S G   HT+ VT  G +F +GD +  +L
Sbjct: 430 YGRLGLGDSN-NQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 350 GH 351
           GH
Sbjct: 489 GH 490


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 35/349 (10%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 67
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 68  -SGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEA-LKGVPC----------KQVTAG 111
            SG+V+T G        +  GH +      +  L E+    +PC           +++ G
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCG 174

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAAG  + L  
Sbjct: 175 ANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCC 234

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
             +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H   +DS GY
Sbjct: 235 NEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHSGCIDSFGY 292

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +YTWG G  G LGHG + D  +P  +  + S   VQ+      +  L  +G VY +G   
Sbjct: 293 IYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQ 352

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
              +  P +           +D+  + H+  I++G Y +  +  R  ++
Sbjct: 353 HEIISLPTK-----------IDAFDS-HICHINSGPYISFAMDVRHNIY 389



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 24/264 (9%)

Query: 121 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----GN 174
           +G ++  G NT+  LG G +  +   P  +     +  V Q++ G S+   +       +
Sbjct: 58  KGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL-EVFQVSCGYSHTAVLVKGISEAS 116

Query: 175 GVVYSFGSGSNFCLGH-------GEQHDE-------LQPRAIQTFRRKGIHVVRVSAGDE 220
           G VY+ G G    LG+       G +HD+         P            + R+S G  
Sbjct: 117 GRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGAN 176

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVD 279
           H +AL  SG V+ WG G  G LG G+  D   P  + +  +   V  + A  R +    +
Sbjct: 177 HSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE 236

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G V+ +G    G LG    G       P  + SL  +H++ ++ G  H+  +   G ++
Sbjct: 237 DGQVFAWGSNSNGRLG--TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G+    +LGH T   C  P  I
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRI 318



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 55/396 (13%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H+L  + +  VF+ GS+  G LG G         T+I   S  H+  V+A E
Sbjct: 222 LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G ++T G+  S   GH  T      PR +E +  +P  Q+T G   +  L+
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGH-GTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALS 340

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V+  G+  H  +          P  I   +    +  I +GP    A+     +Y 
Sbjct: 341 QSGEVYIWGAKQHEIIS--------LPTKIDAFDS--HICHINSGPYISFAMDVRHNIYL 390

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRK------------------------GIHVVRV 215
           +   +N  L + ++ + L     Q ++R                         G ++V  
Sbjct: 391 W---NNRLLVNSKKSEALNANEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDY 447

Query: 216 SAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G++      S G +++  + Y   G+   G  +   +P       S    Q+      
Sbjct: 448 K-GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP-------SWSVRQIACGTSH 499

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDR------GVSDKVLRPRILDSLRAHHVSQISTGLY 327
           T +LV  G+++ +G   +G LG   R      G  ++       +   +  + +++ G +
Sbjct: 500 TLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRRVACGSW 559

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           H++    +G  F +G  +R QLG   +R   EP  I
Sbjct: 560 HSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGI 595



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 102
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-IDTRRRKSQDGDKNESFLNEPTEIKFS 548

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 163 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 210
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +++V+ G  H +AL +SG + TWG GY G LG
Sbjct: 666 PIIKVALGSSHTLALTASGELITWGAGYYGRLG 698



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 28/229 (12%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---------HGEQHDEL--QPRAIQTF 205
           SV QIA G S+ L +   G ++++G      LG          G++++    +P  I+ F
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIK-F 547

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 260
                 + RV+ G  H +  D  G  ++WG+G  G LG G   +   P  + +LK     
Sbjct: 548 SEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604

Query: 261 ------SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
                 S   V       K    +++G ++ +G    G LG  D  +   +  PR L+  
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN-- 662

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               + +++ G  HT+ +T  G L  +G     +LG ++ +    P +I
Sbjct: 663 LGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKI 711



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 156/395 (39%), Gaps = 62/395 (15%)

Query: 2   QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 50
           QI  G  HTLL +   ++F+ G +  G LG         +  +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEP- 550

Query: 51  HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 109 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 155
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 156 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
             ++++A G S+ LA+T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV----QVCARK 271
           + G  H +A+ S G ++ WGK    A     E D   P   + L+S   +     + A  
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGK----AENVLSEKDVLTPYIFAKLESPSGIPRIYSIHAFG 779

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----------HVS 320
             ++ +  +G ++ +G         P+   ++ +        +++H           +  
Sbjct: 780 DVSYAITQSGVLWIWG---------PENSETENIQGLETSIKIKSHTGRAEMIVLPGNAI 830

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            +S    H V +   G +  +GD  R +LG   +R
Sbjct: 831 GVSGSTTHHVCLLASGEVVSWGDPSRGKLGQQDIR 865


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 127/285 (44%), Gaps = 5/285 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N+ +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NNEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GIHV RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
            P+S  K   + +  C     +      G+VY +G     S+  P
Sbjct: 301 TPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTLP 345



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 7/253 (2%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 175
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 118

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 236 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
               G +G G   ++ +P  ++  L++   V +   +  +  +VD G VY +G+ G G L
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQL 237

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G S     P  + +L+  HV +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 238 GL---GSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 355 RGCLEPTEIFIQE 367
                PT I +++
Sbjct: 295 SNQSYPTPISVEK 307



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 12/277 (4%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 114
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 53  SASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHI 111

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 112 V-LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSD 170

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+++G  ++  +G G   ++  PR + T   +   VV ++ G    +A+  +G VY W
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKAVVNIACGQMCSMAVVDAGEVYVW 229

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289

Query: 295 GFPDRGVSD-----KVLRPRILDSLRAH--HVSQIST 324
           G  ++          V + RI++    H  H S   T
Sbjct: 290 GTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKT 326


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 13/326 (3%)

Query: 2    QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 58
            QI  G+  T +I +N +V +CG    G LG G   +  Q    + +       +V    S
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276

Query: 59   ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  +
Sbjct: 3277 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVV 3335

Query: 119  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 176
            +  G + T G+  +G+LG G+T ++  P+ +  LE  G +V Q+  G ++ LAV+ +G  
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALE--GQMVGQVGCGLNHTLAVSADGNT 3393

Query: 177  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
            V+SFG G    LG G    +  P+ +      GI V +V  G +  VAL   G V+T+G+
Sbjct: 3394 VWSFGDGDYGKLGLGNSTAKSTPQRVDPL--CGIGVKKVCCGTQFSVALTKDGRVFTFGQ 3451

Query: 237  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                        +   P+ + +L++     V      +  L  TG V+ +G  G G LG 
Sbjct: 3452 ERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGI 3511

Query: 297  PDRGVSDKVLRPRILDSLRAHHVSQI 322
               G ++    P ++ +L+  +V Q+
Sbjct: 3512 ---GDTNARREPCLVTALQGKNVRQV 3534



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 13/309 (4%)

Query: 47   PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
            PS +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  + +  ++ AL+G   
Sbjct: 3210 PSFSQAQQIICGQN-CTFVIQANGTVQACGEGSYGRLGQGNSDD-LHQLTIISALQGFVV 3267

Query: 106  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    ++Q+A
Sbjct: 3268 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEIIQMA 3326

Query: 163  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             G  +   V+ +G +++FG+G    LG G   ++  P  +     +G  V +V  G  H 
Sbjct: 3327 CGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTAL--EGQMVGQVGCGLNHT 3384

Query: 223  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            +A+ + G  V+++G G  G LG G+   K+ P+ +  L      +VC   + +  L   G
Sbjct: 3385 LAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDG 3444

Query: 282  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             V+ FG      +G P+   S    RP+ + +L A  V  +  G  H++ +T  G ++ +
Sbjct: 3445 RVFTFGQERL--IGQPE-SRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAW 3501

Query: 342  GDNERAQLG 350
            G N   QLG
Sbjct: 3502 GSNGDGQLG 3510



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)

Query: 121  RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            R   +  G   HGQL   G +L  PT   + P        QI  G +    +  NG V +
Sbjct: 3182 RCEAYMWGGGRHGQLAETGRSLLTPT---VTP--SFSQAQQIICGQNCTFVIQANGTVQA 3236

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 238
             G GS   LG G   D  Q   I   +   +  +  S G D H +AL  SG V++WG G 
Sbjct: 3237 CGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 3296

Query: 239  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
             G LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +
Sbjct: 3297 YGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356

Query: 299  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 350
               S+K + P  + +L    V Q+  GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 3357 --TSNKKI-PERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLG 3406



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 43/298 (14%)

Query: 9    HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
            H++ ++ S  VFS G    G LGHG    Q     +I       ++Q++    H+A V  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSA 3337

Query: 68   SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 125
             G++FT G+      G  +T N+ I  P  V AL+G    QV  GLN T  ++  G+ V 
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 126  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            + G   +G+LG G++  + TP+ + PL  +G V ++  G  + +A+T +G V++FG    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ--E 3452

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY------- 238
              +G  E       R  Q    +   V  V  G EH +AL S+G V+ WG          
Sbjct: 3453 RLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512

Query: 239  ---------------------------CGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
                                        G LG GD   +  P  ++ L+     Q+ A
Sbjct: 3513 DTNARREPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISA 3570



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 231  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
             Y WG G  G L    E  ++L  P  +     A Q+   +  TFV+   G+V   G   
Sbjct: 3185 AYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGS 3241

Query: 291  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
            +G LG   +G SD + +  I+ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3242 YGRLG---QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3298

Query: 348  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
            +LGH        P +I   + EE   +A
Sbjct: 3299 KLGHGNSDRQRRPRQIEALQGEEIIQMA 3326


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 26/347 (7%)

Query: 3   ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA   H 
Sbjct: 91  VTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAGGLHN 147

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             + + G V+T G  +    GH    R +  PRL+E         V+AG + T  +T  G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHTAAVTESG 206

Query: 123 HVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A+T +
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIALVYCGGFFTMALTKS 262

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G V TW
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGHG   +   P  + ++       +      T  + + G +Y +G      L
Sbjct: 321 GYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQL 380

Query: 295 GFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 335
           G P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 381 GIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTE 204

Query: 228 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           SG +YTWG+    G LGHG     DE   + P  + +L   +A+  C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCG-GFFTMALTKSG 263

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 34/380 (8%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 75
            V++ G    G +GHG E T+ +         AA            A         TCG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 76  -------DNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
                  +   F  G  D  R         ++P +   +K V  +  +AG      LT  
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRV--QMASAGGLHNIALTEV 153

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G +Y++
Sbjct: 154 GNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTESGELYTW 211

Query: 181 GSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG +++W
Sbjct: 212 GRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIALVYCGGFFTMALTKSGQLWSW 268

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G G L
Sbjct: 269 GGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQL 328

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG   L
Sbjct: 329 G---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGL 385

Query: 355 RG-CLEPTEI-FIQEMEEDT 372
           +   L+P  + F Q + E T
Sbjct: 386 KDEQLDPVLVQFPQALHEKT 405



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           R++Q  RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+L
Sbjct: 13  RSLQR-RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTL 65

Query: 260 K-------SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVS 302
           K       + +  ++ A+ R   V V  G           V+ +G    G LG       
Sbjct: 66  KLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQ 125

Query: 303 DK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            K  + PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 126 YKPYVNPRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 16/232 (6%)

Query: 119 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           T RG + T GS ++ +LG    +   +PTP+ + P   +  +  I+ G  Y  A+T NG 
Sbjct: 540 TSRG-LMTWGSGSYCKLGFKSVEKDSQPTPERL-PNFNISDICSISCGSYYSAALTENGD 597

Query: 177 VYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           VY +G GS        LG+G   D+L P+ +++ +     +V +S G  H  A+ S+G +
Sbjct: 598 VYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQE----IVVISIGFYHSAAVKSNGEL 653

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
            TWG G  G LGHGD  ++ +P+ + S+ SH   QV   ++ T  L   G V+ +G   +
Sbjct: 654 LTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEY 713

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           G LG  D   + K   P ++ SL  +H+ QI+ G  H  V+T+   +  FG+
Sbjct: 714 GQLGLGD---TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN 762



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 137/293 (46%), Gaps = 16/293 (5%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCK 106
           S   +V +S    H+A V  +G++ T G       GH D  N+PI  P++V+++      
Sbjct: 630 SLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHWVT 687

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV  G   T  LT  G V T G++ +GQLG GDT    TP  +  L++   ++QIA G +
Sbjct: 688 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKY-HIIQIACGAT 746

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           +   +T N  V  FG+G+      G  +    P  + +   K +++ R+S G     AL 
Sbjct: 747 HNAVLTNNREVLVFGNGA----AMGSANIISIPIMVPSL--KIMNIERLSCGHYSTAALT 800

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G VYTWG G    LGHG    +  P+ + +L++    Q+    R    L D+G +Y  
Sbjct: 801 ECGDVYTWGSGQ--ELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTS 858

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           G   FG LG       D+  RP+ +DSL       IS G  H   + D  R F
Sbjct: 859 GKDPFGQLG---HAAGDQN-RPKKIDSLLKTTFMSISCGENHNAALFDTTRSF 907



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 25/314 (7%)

Query: 45  NFPSAAHVVQVSASENHAAFVLQSGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEAL 100
           NF + + +  +S    ++A + ++G V+  G     N         T      P+ VE+L
Sbjct: 573 NF-NISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESL 631

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           + +    ++ G   +  +   G + T G    GQLGHGD  ++P PK +  +     V Q
Sbjct: 632 QEIVV--ISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITS-HWVTQ 688

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +  G  + + +T NG V+++G+     LG G+      P  + +  +   H+++++ G  
Sbjct: 689 VQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDK--YHIIQIACGAT 746

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H   L ++  V  +G G   A+G  + I  ++P  + SLK     ++      T  L + 
Sbjct: 747 HNAVLTNNREVLVFGNG--AAMGSANII--SIPIMVPSLKIMNIERLSCGHYSTAALTEC 802

Query: 281 GSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           G VY +G    +G G       G S+    P+++++LR   + QIS G  H   +TD G+
Sbjct: 803 GDVYTWGSGQELGHG------HGTSEA--HPKLVETLRNQSIRQISCGGRHMAFLTDSGK 854

Query: 338 LFGFGDNERAQLGH 351
           ++  G +   QLGH
Sbjct: 855 IYTSGKDPFGQLGH 868



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 22/238 (9%)

Query: 136 GHGDTLDRP----------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
             G+ LD P          TP S  PL  V S     +  S     T  G++ ++GSGS 
Sbjct: 494 NQGNGLDSPHHTTSTGGSFTPGSSPPLNAVNSAESSLSMRSATQLDTSRGLM-TWGSGSY 552

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC-----G 240
             LG      + QP   +        +  +S G  +  AL  +G VY WG+G        
Sbjct: 553 CKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIA 612

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG+G   D+ LP+ + SL+  + + +      +  +   G +  +G    G LG  D  
Sbjct: 613 TLGNGTFDDQLLPQKVESLQEIVVISIGFYH--SAAVKSNGELLTWGCGEDGQLGHGD-- 668

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 357
           V ++ + P+++ S+ +H V+Q+  G  HT+ +T  G++F +G +E  QLG  DT + C
Sbjct: 669 VFNQPI-PKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNC 725



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 72/197 (36%), Gaps = 48/197 (24%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     H++Q++    
Sbjct: 688 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-DKYHIIQIACGAT 746

Query: 61  HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDTNRPI------ 91
           H A +  + +V   G+ ++                         CGH  T          
Sbjct: 747 HNAVLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVY 806

Query: 92  ----------------FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
                             P+LVE L+    +Q++ G     FLT  G ++T G +  GQL
Sbjct: 807 TWGSGQELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQL 866

Query: 136 GHGDTLDRPTPKSIAPL 152
           GH    D+  PK I  L
Sbjct: 867 GHAAG-DQNRPKKIDSL 882


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 20/374 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H++ I+ S   FS GS+  G LGHG  T   V+   +        + V+   
Sbjct: 45  ISVACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKALVNPRCVKALKDKRAILVACGR 103

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H        +V+  G NS    G + +      P+LV  L GV  K +TAG + +  L+
Sbjct: 104 SHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            +G V+  GS+ HGQLG G    R  P     L+  G  + I+AG  +   V  +GV+Y+
Sbjct: 164 AKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYHSAYVNTDGVLYT 220

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           FG        HG+    L P+  +   +    +G+ V  V+ G  H VAL   G  Y++G
Sbjct: 221 FGETE-----HGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFG 274

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G  G LG G  +       L  + + + + +V A +  T  L +   +Y  G    G L
Sbjct: 275 DGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL 334

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
              D  +      P ++D L    V Q+S G  HT+V+     + G  D +  ++G   +
Sbjct: 335 ALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLV----VPGLTDPQGNRMGDSPI 390

Query: 355 RGCLEPTEIFIQEM 368
              ++ TE+ +  +
Sbjct: 391 SAAVQATELTLARL 404



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 56/245 (22%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-------- 208
           +V+ +A G  + + +T +G  +SFGS     LGHG     + PR ++  + K        
Sbjct: 43  AVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACG 102

Query: 209 -------------------------------------------GIHVVRVSAGDEHVVAL 225
                                                      G+ V  ++AG +H +AL
Sbjct: 103 RSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLAL 162

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
            + G VY WG    G LG G +  + LP  L +    +A+   A     +V  D G +Y 
Sbjct: 163 SAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAY-HSAYVNTD-GVLYT 220

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           FG    G LG        K  +P  +  ++   V+ ++ G  HTV +T  GR + FGD  
Sbjct: 221 FGETEHGKLG--TNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALTCDGRAYSFGDGS 277

Query: 346 RAQLG 350
           + QLG
Sbjct: 278 QGQLG 282



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G+ F  G  +  D L      TF  K   V+ V+ GD+H V + +SG  +++G    G L
Sbjct: 19  GAVFTFGKSKFSDNLPG----TFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQL 74

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           GHG       P  + +LK   A+ V   +  T V  D   VY FG      LG       
Sbjct: 75  GHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAY 134

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                P+++ +L    V  ++ G  H++ ++ +G ++ +G +E  QLG
Sbjct: 135 HA--DPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLG 180


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V+Q++  + H+  +   GQ+F  G+N+    G R        PR +++L G+P  Q++A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G N +  L++ G V   G N+ GQLG GDT DR  P  +  L+    +V I+ G  +  A
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIVSISCGGEHTAA 237

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSG 229
           +   G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +V+  S  
Sbjct: 238 LAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPK 295

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPL 256
            +Y++G G  G LG+G+++ +++P P+
Sbjct: 296 LIYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 141 LDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDEL 197
           +D+ T    +PL+  E   V+QIA G  + +A+T +G ++ +G  +   LG   EQ    
Sbjct: 103 MDKST--ECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ 160

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 257
            PR +Q+    GI V ++SAG  H   L  SG V+ WG    G LG GD  D+ +P  ++
Sbjct: 161 SPRHLQSL--CGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVN 218

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSL 314
           SLK    V +      T  L   G+V+ FG  GFG LG   F D         PR++  L
Sbjct: 219 SLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEH------HPRLVAEL 272

Query: 315 RAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGH 351
               VSQ++ G  HT+V T   +L + FG   + QLG+
Sbjct: 273 WGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGN 310



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ ++N   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  +  SG VF  G NS+   G  DT    F P +V +LK      ++ G   T  L 
Sbjct: 181 NHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAALA 239

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN-GVV 177
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G ++ L  T +  ++
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--WGSKVSQVTCGRNHTLVSTASPKLI 297

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 225
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG+ H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCA 269
            V++++ GD+H +AL + G ++ WG+   G LG   E   T  P  L SL      Q+ A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +FVL  +G V+G+G    G LG  D   +D+ + P +++SL+   +  IS G  HT
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGD--TTDRFV-PTVVNSLKRKKIVSISCGGEHT 235

Query: 330 VVVTDRGRLFGFGDNERAQLGHDTLR 355
             +   G +F FG     QLGH++ +
Sbjct: 236 AALAKGGTVFTFGSGGFGQLGHNSFK 261


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 27/332 (8%)

Query: 33  PETTQCVSFTRI----NFPSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNS--SFC 81
           PET    +F +     N PS   +     + +S  + H+A + +SG+++T G N      
Sbjct: 10  PETGAIFTFGKSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLG 69

Query: 82  CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 141
            GH    +P  +P  V++LK      V  G + T   T  G +++ G+ + GQLG GD  
Sbjct: 70  LGHM---KPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQ 126

Query: 142 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 201
              +P+ I   E+   +  ++AG  +  A+T +G +Y +GSGS   LG G       P+ 
Sbjct: 127 CATSPQLINLPEQKYKL--LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE 184

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSL 259
           ++        V  VS G  H   +   G +YT+G+   G LG  ++   D T P+ + S+
Sbjct: 185 LKFHSS----VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESI 240

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHH 318
              + +  C     T V+ D G++Y FG    G LG    G S   L  P+ +  L  H 
Sbjct: 241 TEKIKLVACGGAH-TAVISDVGNLYTFGDGMHGQLG---NGPSLLQLSLPQKVARLSEHK 296

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              +S G  HT V+T++G ++ FGD    +LG
Sbjct: 297 CKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 138/290 (47%), Gaps = 21/290 (7%)

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
           A + ++G +FT G  S F     D     F  R  +A+       ++ G   +  +T  G
Sbjct: 7   ADIPETGAIFTFG-KSRFA----DNLPSKFWIRNDKAM------HISCGDEHSAIITESG 55

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            ++T GSN  GQLG G       P  +  L++ G V  +A G S+ +  T  G +YSFG+
Sbjct: 56  RLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEG-VNLVACGRSHTIVCTKAGRLYSFGA 114

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           GS+  LG G+      P+ I    +K      +SAG +H  AL + G +Y WG G  G L
Sbjct: 115 GSDGQLGTGDAQCATSPQLINLPEQK---YKLLSAGTDHSAALTTDGTLYMWGSGSEGQL 171

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           G G+      P+    LK H +V  V      T ++ D G +Y FG   FG LG  +  +
Sbjct: 172 GLGNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQL 228

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            D    P+ ++S+    +  ++ G  HT V++D G L+ FGD    QLG+
Sbjct: 229 EDTT-TPKHVESI-TEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGN 276



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQ--CVSFTRINFPSAAHVVQV 55
           M I+ G  H+ +I+ S  +++ GS+  G LG  H   TT+  CV   +        V  V
Sbjct: 39  MHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLK-----QEGVNLV 93

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +   +H     ++G++++ G  S    G  D       P+L+  L     K ++AG + +
Sbjct: 94  ACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCAT-SPQLIN-LPEQKYKLLSAGTDHS 151

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             LT  G ++  GS + GQLG G+T    TPK    L+   SV  ++ G  +   VT +G
Sbjct: 152 AALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE---LKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 176 VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            +Y+FG      LG  E    D   P+ +++   K   +  V+ G  H   +   G +YT
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEK---IKLVACGGAHTAVISDVGNLYT 265

Query: 234 WGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           +G G  G LG+G  + + +LP+ ++ L  H    V      T V+ + G++Y FG    G
Sbjct: 266 FGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHG 325

Query: 293 SLGFPDRGVSDKVLRP 308
            LG  +    + + +P
Sbjct: 326 KLGISEEDFCN-IFKP 340



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
            + I+ G  +   +T +G +Y+FGS     LG G      +P  +++ +++G+++V  + 
Sbjct: 38  AMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV--AC 95

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G  H +    +G +Y++G G  G LG GD    T P+ L +L       + A    +  L
Sbjct: 96  GRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQ-LINLPEQKYKLLSAGTDHSAAL 154

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-VSQISTGLYHTVVVTDRG 336
              G++Y +G    G LG    G +D V  P+    L+ H  VS +S G YHT +VTD G
Sbjct: 155 TTDGTLYMWGSGSEGQLGL---GNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 337 RLFGFGDNERAQLG--HDTLRGCLEPTEI 363
           +L+ FG+ E  +LG   D L     P  +
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHV 237



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G ++T+GK               LP     +++  A+ +      + ++ ++G +Y FG
Sbjct: 12  TGAIFTFGK---------SRFADNLPSKFW-IRNDKAMHISCGDEHSAIITESGRLYTFG 61

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
              +G LG    G      +P  + SL+   V+ ++ G  HT+V T  GRL+ FG     
Sbjct: 62  SNDWGQLGL---GHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDG 118

Query: 348 QLGHDTLRGCLEPTEIFIQEME 369
           QLG    +    P  I + E +
Sbjct: 119 QLGTGDAQCATSPQLINLPEQK 140


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 21/275 (7%)

Query: 107  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAG 164
            +V+ G +    +T  G ++T GSN  GQLGHG  +++    PK +        +  +  G
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECG 1185

Query: 165  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
              + +AV  N  VYS+GS     LGHG +  ++ +P+ I+    + I  +  +AG  H +
Sbjct: 1186 GEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAI--AAGFAHNI 1243

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLA---VQVCARKRKT 274
             L  SG ++++G G  G LG G    K +P        +  L+ H      Q+      +
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 275  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             +  + G VY +G    G LG     V + + +PR++++LR   V++IS G +HTV  TD
Sbjct: 1304 VICSENGEVYSWGLGKQGQLG---HKVFENISKPRLIETLRG--VTKISCGHFHTVATTD 1358

Query: 335  RGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQE 367
               ++ +G  E  +LGH + +    P   + FIQ+
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK 1393



 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 118/224 (52%), Gaps = 10/224 (4%)

Query: 149  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ-PRAIQTFR 206
            +APL+     ++++ G  ++  +T +G +Y++GS  +  LGHG E +  L  P+ +  FR
Sbjct: 1115 MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174

Query: 207  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAV 265
             K   +  V  G EH +A+DS+ +VY+WG    G LGHG + ++++ P+ +  L      
Sbjct: 1175 GKS-PIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQ 1233

Query: 266  QVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH---HV 319
             + A      VL  +G ++ FG+  FG LG   F  + +  ++    I+  L+ H    +
Sbjct: 1234 AIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKI 1293

Query: 320  SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            +QI+ G  H+V+ ++ G ++ +G  ++ QLGH       +P  I
Sbjct: 1294 TQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI 1337



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 97/402 (24%), Positives = 169/402 (42%), Gaps = 40/402 (9%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF-TRIN-FPSAAHVVQVSA 57
            ++++ G  H  +I++   +++ GS+  G LGHG E  + +S   R++ F   + +  V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
               H   V  +  V++ G +     GH        RP+++E L G   + + AG      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------PLEEVGSVVQIAAGPSYML 169
            L   G + + G    GQLG G    +  P  I            + G + QIA G  + +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 170  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
              + NG VYS+G G    LGH    +  +PR I+T R     V ++S G  H VA     
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR----GVTKISCGHFHTVATTDLK 1360

Query: 230  YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRK-TFVLVD-------- 279
             VY+WG G    LGH  + D+++P+ +   ++ +++  VC +    T    D        
Sbjct: 1361 NVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQD 1420

Query: 280  -----------TGSVYGFGWMGFGSLGFPDRGVS---DKVLRPRILDSLRAHHVSQISTG 325
                       +  +Y +G    G LG      S   DK + P  +  + + ++  IS G
Sbjct: 1421 DEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPI-PTAIKGVNSLNLIDISCG 1479

Query: 326  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
               + ++T    ++ +G     Q+G+        PT I + +
Sbjct: 1480 SDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLND 1521


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 15/302 (4%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           V +S  + H A V  +G+++  G N+      G ++T   + +P  V+ALK    K    
Sbjct: 33  VLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNT---VSKPTCVKALKPEKTKLAVC 89

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAA 149

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 150 VTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV----GKPVSSISCGYYHSALITGDGE 205

Query: 231 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +T  VY FG 
Sbjct: 206 LYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGEH-TVVLTET-DVYTFGL 263

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             +G LG         V  P+ +  LR H +  I+ G  HT VV + G +F FGD    +
Sbjct: 264 GQYGQLGHGTFIFETSV--PKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGK 321

Query: 349 LG 350
           LG
Sbjct: 322 LG 323



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 38/259 (14%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTNQHKIKQLAAGSYTSA 148

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFT 115
            V + GQ+F  GDNS    G  D           EA   VPC+         ++ G   +
Sbjct: 149 AVTEDGQLFVWGDNSEGQIGLAD-----------EACVSVPCQVDVGKPVSSISCGYYHS 197

Query: 116 GFLTIRGHVHTCGSNTHGQLG------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
             +T  G ++T G   +G+LG        + + +P P  +        V ++A G  + +
Sbjct: 198 ALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME------KVNKVACGGEHTV 251

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            +T   V Y+FG G    LGHG    E   P++++  RR  I    ++ G+ H   +  +
Sbjct: 252 VLTETDV-YTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKI--CNITCGENHTAVVAEN 308

Query: 229 GYVYTWGKGYCGALGHGDE 247
           G ++T+G G  G LG G+E
Sbjct: 309 GLMFTFGDGRHGKLGLGEE 327


>gi|148231237|ref|NP_001082607.1| serine/threonine-protein kinase Nek9 [Xenopus laevis]
 gi|49522774|gb|AAH74227.1| LOC398600 protein [Xenopus laevis]
          Length = 944

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   SV +++ G  +   +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 315
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 253
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 34/304 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           +++ G   T  I++   ++S GS   G LG      ++ +    ++F     V QVS  +
Sbjct: 412 KVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +H   + +S  V++ G      CG       D+   ++ P+ VE  +G+    V  G + 
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
            A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 276 VLVD 279
           ++V+
Sbjct: 704 LIVE 707



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 48/345 (13%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           GS L G LGHG   +       +       V +VS   +  A +   GQ+++ G +   C
Sbjct: 381 GSKLHGQLGHGDRASY-RQPKHVEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGC 439

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G ++     +  P LV+     P  QV+ G +    LT    V++ G   +G+LG    
Sbjct: 440 LGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE 499

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE------QH 194
            D  +P+ +  ++    +V +  G      +T  G V + G   +  LG  +       H
Sbjct: 500 DDVYSPQKVE-VQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558

Query: 195 DELQP----RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           +  Q      ++   ++   + +R +S G  H  A+D  G + T+G   CG LG GD   
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD--- 615

Query: 250 KTLPEPLSSLKSHLAVQV--------------CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
                     + HL + +              C  +  T    D   ++ +G  G G L 
Sbjct: 616 ---------YRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADN-HIFAWGNGGNGRLA 665

Query: 296 F-PD---RGVSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
             P+   +G       PR I  SL  HHV+ +S   +HT+++ ++
Sbjct: 666 MTPNERPQGSDICTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 94  PRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 152
           P LV+   K +    ++AG  ++  +T  G+V+T G N  GQLG GD      P+ I  L
Sbjct: 220 PVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSL 279

Query: 153 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
               S+V IA G  +M A++ +G +Y++G G    LGHG+    L P+ +  F ++   +
Sbjct: 280 SN-KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKI 338

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEIDKTLPEPLS 257
           V+V+ G    +A+  +G ++++G G  G LG                 D +  +LP+ + 
Sbjct: 339 VQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVK 398

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           +L+S    +V      T  +     VY +GW   G LGF DR      L P+ + SL   
Sbjct: 399 ALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQ---LVPQRVPSLSGE 455

Query: 318 HVSQISTGLYHTVVV 332
            +S +S G  HT++V
Sbjct: 456 EISSVSGGEKHTLIV 470



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 22/252 (8%)

Query: 44  INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALK 101
           ++F S +  +V +SA   ++A V  +G V+T G N     G  D  R     PR++ +L 
Sbjct: 223 VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGD--RWYHGNPRVIRSLS 280

Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ 160
                 +  G      ++  G ++T G    GQLGHG       PK +   E +   +VQ
Sbjct: 281 NKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQ 340

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLG------------HGEQHDELQ---PRAIQTF 205
           +A G ++ +AV+ NG ++SFG G    LG            +G++ D L+   P+ ++  
Sbjct: 341 VATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL 400

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
             + + V +V+ G  H +A+ +   VYTWG G  G LG GD   + +P+ + SL      
Sbjct: 401 --ESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEIS 458

Query: 266 QVCARKRKTFVL 277
            V   ++ T ++
Sbjct: 459 SVSGGEKHTLIV 470



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 141/375 (37%), Gaps = 48/375 (12%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 76
           SV S G    G LG      Q +    I       + Q++  E H+  V + G V++ G 
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQ-LDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 77  NSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAG------LNFTGFLTIRGHVHTCG 128
                 GH  +    P   P L++AL+     +V  G      L  TG +   G +H   
Sbjct: 61  GKEGELGHPQKAMTAP---PALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEID 117

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPL------------EEVGSVVQIAAGPSYMLAVTGNGV 176
           +   G    G  ++    KS A              E+     + A+        T NG+
Sbjct: 118 ATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGL 177

Query: 177 VYSFGSGSNFCLGHG--EQHDELQPR-----------------AIQTFRRKGIHVVRVSA 217
           V          L     +   E QP                   +  F  K I +V +SA
Sbjct: 178 VTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISA 237

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G  +  A+ S+G VYTWG    G LG GD      P  + SL +   V +   ++    +
Sbjct: 238 GWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAI 297

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDR 335
             +G +Y +G   FG LG    G    +L P+  +    +   + Q++TG   T+ V++ 
Sbjct: 298 SKSGDLYTWGLGVFGQLG---HGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSEN 354

Query: 336 GRLFGFGDNERAQLG 350
           G LF FG  E  QLG
Sbjct: 355 GELFSFGHGEYGQLG 369



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 58
           + I  GR H   IS S  +++ G  + G LGHG   +       + F      +VQV+  
Sbjct: 285 VNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATG 344

Query: 59  ENHAAFVLQSGQVFTCG----------DNSSFC----CGHRDTNRPIFRPRLVEALKGVP 104
            N    V ++G++F+ G          +++ +      G RD +     P+ V+AL+ V 
Sbjct: 345 ANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVK 404

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV 158
            ++V  G   T  +T    V+T G  + G LG GD   +  P+ +  L  EE+ SV
Sbjct: 405 VRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSV 460



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 245 GDEIDKTLPEPLS---SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           G+ +DK    P+      KS   V + A    +  +  TG+VY +G+   G LG  DR  
Sbjct: 210 GEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWY 269

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                 PR++ SL    +  I+ G  H   ++  G L+ +G     QLGH  L+  L P 
Sbjct: 270 HG---NPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPK 326

Query: 362 EIFIQEMEE 370
           ++   E ++
Sbjct: 327 KVLYFEQQQ 335



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           SV  FG    G LG     V+   L P ++  L+   + QI+ G  H++ VT+ G ++ +
Sbjct: 2   SVISFGVGKQGQLGL---DVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSW 58

Query: 342 GDNERAQLGH 351
           G  +  +LGH
Sbjct: 59  GRGKEGELGH 68


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           S ++  GS   GVLG      +  S   ++    + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANGVLGSSSVKGKTTSPVPVD--DLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G    +  P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTNKSRNSPVL 278

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 316 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 11/208 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G   +L +S + +V++ G++  G LG+G   T+  +   +       V+ +S  E  
Sbjct: 189 IDAGEEFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELTDVIAISTGEKQ 245

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  +G V+  G N         TN+    P L++ +  V    V +G   T  L   
Sbjct: 246 GYAVTSNGDVYGWGYNQGKLG--DGTNKSRNSPVLIDGIYDVIA--VDSGKQHTLALKED 301

Query: 122 GHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +  A+  +G V+
Sbjct: 302 GTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVW 361

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           S+G  SN  LG G    ++ P  I+T  
Sbjct: 362 SWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|449274807|gb|EMC83885.1| Serine/threonine-protein kinase Nek9, partial [Columba livia]
          Length = 878

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 263 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 322

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + +T  G VY+FGS    C+G  + +  + L+P  +  F
Sbjct: 323 HVEKLQG-KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPLQLDFF 381

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 382 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 439

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 315
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 440 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 499

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 500 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 534



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ I++   V++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 334 QVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPL---QLDFFLTNPVEQVS 390

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 391 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 444

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 445 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 504

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 505 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGD 563

Query: 220 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 564 EFTIAATDDNHIFAWGNGGNGRLAMTSTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 622

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 623 HTIIVVE 629



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 270 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 329

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G VY FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 330 KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGV-DKAYGSEVLEPLQLDFFLTNPVEQ 388

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 389 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 432



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 131/342 (38%), Gaps = 42/342 (12%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 73
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQV+ 
Sbjct: 303 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIHQVSCGDDFTVCITDEGQVYA 353

Query: 74  CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 354 FGSDYYGCIGVDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 413

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 186
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 414 GRLGLDSEEDHYTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 472

Query: 187 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 241
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 473 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 532

Query: 242 LGHGDEIDKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD- 298
           LG GD   K L   L    L     ++V      T    D   ++ +G  G G L     
Sbjct: 533 LGVGD-YKKHLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTST 591

Query: 299 -----RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
                  +     RP I  SL  HHV  +S   +HT++V ++
Sbjct: 592 ERAHGSDICTSWPRP-IFGSL--HHVPDLSCRGWHTIIVVEK 630


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 51/357 (14%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 67
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 68  -SGQVFTCGDNSSFCCGH-------------RDTNRPIFRPRLVEALKGVPC-------- 105
            SG+V+T G       G+              D N   + P        VPC        
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTP--------VPCIVNFPFNA 166

Query: 106 --KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
              +++ G N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAA
Sbjct: 167 KISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAA 226

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           G  + L    +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H 
Sbjct: 227 GARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHS 284

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             +DS GY+YTWG G  G LGHG + D  +P  +  + S   VQ+      +  L  +G 
Sbjct: 285 GCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGE 344

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
           VY +G      +  P +           +D+  + H+  I++G Y +  +  R  ++
Sbjct: 345 VYIWGAKQHEIISLPTK-----------IDAFDS-HICHINSGPYISFAMDVRHNIY 389



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 24/264 (9%)

Query: 121 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----GN 174
           +G ++  G NT+  LG G +  +   P  +     +  V Q++ G S+   +       +
Sbjct: 58  KGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL-EVFQVSCGYSHTAVLVKGISEAS 116

Query: 175 GVVYSFGSGSNFCLGH-------GEQHDE-------LQPRAIQTFRRKGIHVVRVSAGDE 220
           G VY+ G G    LG+       G +HD+         P            + R+S G  
Sbjct: 117 GRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISCGAN 176

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVD 279
           H +AL  SG V+ WG G  G LG G+  D   P  + +  +   V  + A  R +    +
Sbjct: 177 HSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE 236

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            G V+ +G    G LG    G       P  + SL  +H++ ++ G  H+  +   G ++
Sbjct: 237 DGQVFAWGSNSNGRLG--TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 340 GFGDNERAQLGHDTLRGCLEPTEI 363
            +G+    +LGH T   C  P  I
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRI 318



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 55/396 (13%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G  H+L  + +  VF+ GS+  G LG G         T+I   S  H+  V+A E
Sbjct: 222 LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +   G ++T G+  S   GH  T      PR +E +  +P  Q+T G   +  L+
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGH-GTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALS 340

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V+  G+  H  +          P  I   +    +  I +GP    A+     +Y 
Sbjct: 341 QSGEVYIWGAKQHEIIS--------LPTKIDAFDS--HICHINSGPYISFAMDVRHNIYL 390

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRK------------------------GIHVVRV 215
           +   +N  L + ++ + L     Q ++R                         G ++V  
Sbjct: 391 W---NNRLLVNSKKSEALNASEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDY 447

Query: 216 SAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             G++      S G +++  + Y   G+   G  +   +P       S    Q+      
Sbjct: 448 K-GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP-------SWSVRQIACGTSH 499

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDR------GVSDKVLRPRILDSLRAHHVSQISTGLY 327
           T +LV  G+++ +G   +G LG   R      G  ++       +   +  + +++ G +
Sbjct: 500 TLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIRRVACGSW 559

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           H++    +G  F +G  +R QLG   +R   EP  I
Sbjct: 560 HSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGI 595



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 25/213 (11%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 102
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-VDTRRRKSQNGDKNESFLNEPTEIKFS 548

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 163 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 210
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
            +++V+ G  H + L +SG + TWG GY G LG
Sbjct: 666 PIIKVALGSSHTLVLTASGELITWGAGYYGRLG 698



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 28/229 (12%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---------HGEQHDEL--QPRAIQTF 205
           SV QIA G S+ L +   G ++++G      LG         +G++++    +P  I+ F
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIK-F 547

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 260
                 + RV+ G  H +  D  G  ++WG+G  G LG G   +   P  + +LK     
Sbjct: 548 SEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604

Query: 261 ------SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
                 S   V       K    +++G ++ +G    G LG  D  +   +  PR L+  
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN-- 662

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
               + +++ G  HT+V+T  G L  +G     +LG ++ +    P +I
Sbjct: 663 LGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKI 711



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 62/395 (15%)

Query: 2   QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 50
           QI  G  HTLL +   ++F+ G +  G LG            +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEP- 550

Query: 51  HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 109 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 155
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 156 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
             ++++A G S+ L +T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV----QVCARK 271
           + G  H +A+ S G ++ WGK    A     E D   P   + L+S   V     + A  
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGK----AENVLSEKDVLTPYIFAKLESPSGVPRIYSIHAFG 779

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----------HVS 320
             ++ +  +G ++ +G         P+   ++ +        +++H           +  
Sbjct: 780 DVSYAITQSGVLWIWG---------PENSETENIQGLESSIKIKSHTGRAEMILLPGNAI 830

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            +S    H V +   G +  +GD  R +LG   +R
Sbjct: 831 GVSGSTTHHVCLLASGEVVSWGDPSRGKLGQQDIR 865


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 127/293 (43%), Gaps = 7/293 (2%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            V  V+    H+A V+ SG+V   G+N    CG   T      P  V +L GV C  V+ 
Sbjct: 30  QVRDVACGLVHSAMVMGSGEVLCWGENKYGQCG-TGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   T  ++  G V + G   +GQLGHG   +  TP  +  +     V+ +  G  + + 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGR-DVLAVTCGVGHTVI 147

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           V   G +Y+ G   N   G G   D L P+ +++ R +G+     S G  H   +   G 
Sbjct: 148 VLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQ--HASCGAGHTAVVTGGGE 205

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           V+T+G G CG LGHGD  D ++P  + +L   +   V   +  T        V+GFG   
Sbjct: 206 VFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNN 265

Query: 291 FGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
            G LG      S   L  PR ++ L+   V          + +T RG L  +G
Sbjct: 266 VGQLGASS--TSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 15/282 (5%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           PR+++   G   + V  GL  +  +   G V   G N +GQ G G       P  +  L 
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLF 79

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            V + + ++ G ++ + V+ +G V+S+G G+N  LGHG + +   P  +Q  R  G  V+
Sbjct: 80  GV-ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMR--GRDVL 136

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            V+ G  H V + + G +YT G    G  G G   D   P+ + SL+             
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGH 196

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T V+   G V+ FG    G LG  D      +  PR + +L    +S ++ G  +TV   
Sbjct: 197 TAVVTGGGEVFTFGSGSCGQLGHGD---CQDLSMPRRVGALVGIVMSMVACGEEYTVCAA 253

Query: 334 DRGRLFGFGDNERAQLG-----HDTLRGCLEPTEI-FIQEME 369
              R+FGFG N   QLG     H  L    EP ++ F++E E
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLS---EPRQMEFLKEEE 292



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 8/215 (3%)

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           G+ +   TP+ +   + +G  V+ +A G  +   V G+G V  +G       G G Q   
Sbjct: 12  GEQVSSSTPRMLK--KAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
             P  + +    G+  + VS G  H V +   G V++WG G  G LGHG   + T P  +
Sbjct: 70  EHPTFVGSLF--GVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVV 127

Query: 257 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 316
            +++    + V      T +++  G +Y  GW   G  G    G +  +L P+ ++SLR 
Sbjct: 128 QAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGV---GSTSDLLSPQCVESLRG 184

Query: 317 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             V   S G  HT VVT  G +F FG     QLGH
Sbjct: 185 EGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 53
           M ++ G  HT+++S +  VFS G    G LGHG       S   +  PS         V+
Sbjct: 84  MSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG-------SRDNLTTPSVVQAMRGRDVL 136

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            V+    H   VL  G+++TCG N +  CG   T+  +  P+ VE+L+G   +  + G  
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLLSPQCVESLRGEGVQHASCGAG 195

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 172
            T  +T  G V T GS + GQLGHGD  D   P+ +  L  VG V+  +A G  Y +   
Sbjct: 196 HTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAA 253

Query: 173 GNGVVYSFGSGSNFCLGHGE-QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
            +  V+ FG  +   LG     H  L +PR ++  + + + + + +     V+AL   G 
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN--QSEVIALTRRGA 311

Query: 231 VYTWG 235
           +  WG
Sbjct: 312 LRAWG 316


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLVKQVVEVACGSHHSMALAADGELFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 354 LRGCLEPTEIFIQE 367
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 8/260 (3%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V  +SASE  A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++
Sbjct: 24  ACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKRIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     V  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           +A+  +G ++++G  +   +G G   ++  PR +         VV ++ G    +A+  S
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-KVVNIACGQTSSMAVLDS 199

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G VY WG    G LG G+  ++  P  +++L      Q+      T  L D G +Y +G 
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259

Query: 289 MGFGSLGFPDRGVSDKVLRP 308
             +G LG    G  + +L P
Sbjct: 260 NTYGQLG---TGSKNNLLSP 276



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--GVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            LG G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G    N     P  V AL GV   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 37/290 (12%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG------HGDTLDR- 143
           + RP+ V    G P  QV  G     +LT  G V++ G N   ++       H  TL   
Sbjct: 465 VLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524

Query: 144 ------PTPKSIAP--LEEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
                  T   +AP  +EE+         ++  +A G  + LA+T  G +Y++GSG +  
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LGHG+  D   PR + +  R+   VV  S G  H   L + G V+T+G+G  G LG GD 
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRES--VVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDN 642

Query: 248 IDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS--LGFPDRGVSD 303
             +  P P+      + +++ VC     T  L   GSV+ +G  G G   LG+ DR   D
Sbjct: 643 KWRDTPHPIVGFPQGTSISLVVCGWN-FTAALDRQGSVFTWGKTGEGQCGLGYVDR---D 698

Query: 304 KVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +V+ PR +D LR      V  ++ G  HTVV+T  G L+ +G  E  QLG
Sbjct: 699 QVV-PRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG 747



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 40/360 (11%)

Query: 44  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN-----SSFCCGHRDTNRP-------- 90
           ++  +   +VQV+    H  ++  +G V++ GDN     ++       +  P        
Sbjct: 471 VSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVV 530

Query: 91  ----IFRPRLVE------ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
                  P LVE      AL       V  G   +  +T  G ++T GS   G+LGHGD 
Sbjct: 531 STSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDM 590

Query: 141 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 200
            DR  P+ +  L    SVV  + G ++   +T  G V++FG G N  LG G+      P 
Sbjct: 591 RDRAVPRKVMSLLR-ESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPH 649

Query: 201 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEPLS 257
            I  F  +G  +  V  G     ALD  G V+TWGK   G CG LG+ D  D+ +P  + 
Sbjct: 650 PIVGF-PQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG-LGYVDR-DQVVPRCVD 706

Query: 258 SLKS---HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRILD 312
            L+       V V      T VL  +G +Y +G   +G LG  D  + +  +V  P   D
Sbjct: 707 KLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLP--AD 764

Query: 313 SLRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDTLRGCLEPTEIFIQEME 369
           +L A   ++++  G +H++  T++  +F +G N      LGH   +   E  + F  + E
Sbjct: 765 ALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTE 824



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 18/298 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  V+    H+  +  +G+++T G       GH D  R    PR V +L        + G
Sbjct: 555 IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDM-RDRAVPRKVMSLLRESVVSASCG 613

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              T  LT +G V T G   +G+LG GD   R TP  I    +  S+  +  G ++  A+
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 172 TGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSS 228
              G V+++G +G   C LG+ ++ D++ PR +   R   G  VV V+ G  H V L +S
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDR-DQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTAS 732

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV-------LVDTG 281
           G +Y+WG G  G LG GD     + +PL +     A  +CA  +   V       +  T 
Sbjct: 733 GELYSWGLGEYGQLGTGD-----VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTE 787

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
               F W G  S G    G +    +P  +D   +     ++ G  +T+ +     L+
Sbjct: 788 QRVMFAW-GLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLY 844



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 10/235 (4%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +  +L +  SVF+ G    G LG G    +      + FP    +  V    N  A +
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP---CKQVTAGLNFTGFLTIRG 122
            + G VFT G      CG    +R    PR V+ L+ V       V  G   T  LT  G
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASG 733

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA---AGPSYMLAVTGNGVVY 178
            +++ G   +GQLG GD   +P P  +  P + + +  Q+A    G  + +A T   V++
Sbjct: 734 ELYSWGLGEYGQLGTGDVY-QPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMF 792

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           ++G  S    G G   ++ +P  I  F  +   V  V+ G ++ +AL+ +  +YT
Sbjct: 793 AWGLNSYGACGLGHTANKDKPERIDCFSSQTELV--VACGHKYTIALEVNASLYT 845



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 24/177 (13%)

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 268
            + VV +  GD+     + S  +Y WG+    +L  G  +    P+ +S       VQV 
Sbjct: 427 AVDVVELEEGDDATQVEEPSSCMYVWGRP--PSLEGGTPL-VLRPKHVSLANGQPIVQVA 483

Query: 269 ARKRKTFVLVDTGSVYGFG----------WMGFGSLGFPD----RGVS-DKVLRPRILDS 313
                   L  TG VY +G           +   +   PD    R VS    L P +++ 
Sbjct: 484 CGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEE 543

Query: 314 L---RAHH---VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
           L   +A H   ++ ++ G  H++ +TD G L+ +G  E  +LGH  +R    P ++ 
Sbjct: 544 LALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVM 600


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 175
           ++T    V   G N    LG GD+L    PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  +G VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDTGEVYA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     + P  L  L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I  ++
Sbjct: 269 NKSNQLSPVQILTEK 283



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 7/279 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 70
           + ++  VF  G +    LG G   +  V   +++F S   VV +S  S  H     + G+
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVP-KKLDFLSGRKVVSLSYGSGPHILLATEDGE 95

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  G V+  G 
Sbjct: 96  LFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
            G   +++ P   +    +G+ V ++ +G  H +AL   G +Y WG    G LG G++ +
Sbjct: 215 LGNNGNQVTP--CRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSN 272

Query: 250 KTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           +  P  + + K  +  +  C     +     +G VY +G
Sbjct: 273 QLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 3/240 (1%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +S N A ++    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIV-PKKLDFLSGRKVVSLSYGSGPHI 87

Query: 117 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            L T  G +   G N + QLG+G T     P  ++       V ++A G  + +A+T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVSIVCGQTSSLAVVDNGEVYGWG 206

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G+  ++  P  L  L+     Q+ +    +  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLG 266


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 158/350 (45%), Gaps = 21/350 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G   T+ + N  +V+S G +  G LG G   T   S + +       +  +SA  
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVKGLNGITAISAGW 94

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G V+T G   S   G   TN     P  +  L G+    ++AG N T  L 
Sbjct: 95  AHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA--ISAGWNHTLALK 151

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G + + G N +GQLG G+T +   P  +    ++G +  I++G  + L +  +G V+S
Sbjct: 152 ADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGHSLVIKNDGTVWS 208

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG+G   +   P  I         ++ VSAG  H  AL S G V+ WG  + 
Sbjct: 209 WGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKSDGTVWNWGCNFR 264

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G L +G++ID  +P   + L   +A  + A    +  +   G+ + +G   +G LG    
Sbjct: 265 GELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWGVNDYGQLG---N 319

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           G    V  P  + SL    ++ I TG  +TV +   G +F FG+N   QL
Sbjct: 320 GSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTYGQL 367



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 217
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 336
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+   H
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISSGGGH 196

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  +  L  
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHSTALKS 252

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  G+L +G+ +D   P     L     ++ I AG  +  A+  +G  + +
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLN---GIIAITAGWEFSSAIKSDGTFWVW 309

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+   G
Sbjct: 310 GVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGENTYG 365

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            LG+G     T PE +S   +++A    A
Sbjct: 366 QLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  V+  E H  F+ + G++++ G N     G        F    V         Q++AG
Sbjct: 43  VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
            + T  +T  G V   GSN HGQLG       + TP+ +   +E+  +VQ+A+G ++ +A
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIA 159

Query: 171 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           +   G V+ +G  ++  C+   E  ++L           G+ +VRV AG  H +AL +SG
Sbjct: 160 LDEGGRVFVWGEQADGRCIHRPEPVEQL----------SGVPIVRVLAGARHCLALSASG 209

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            V+TWG+   G LG  D   +T  + +  +     V+       T +L   G  + FG  
Sbjct: 210 AVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  +G  + FG N   QL
Sbjct: 270 ALGQCGFGKK--VEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQL 326

Query: 350 GH 351
           G+
Sbjct: 327 GN 328



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 156/342 (45%), Gaps = 28/342 (8%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +T G  HT+ ++ +  ++S GS++ G LG G  T    S   +++ S+A ++Q+SA  +H
Sbjct: 46  VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V   G+VF  G N     G          PR V+ +  +   QV +G N    L   
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDEG 163

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 179
           G V   G    G+  H     RP      P+E++  V  V++ AG  + LA++ +G V++
Sbjct: 164 GRVFVWGEQADGRCIH-----RP-----EPVEQLSGVPIVRVLAGARHCLALSASGAVFT 213

Query: 180 FGSGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +G  ++  LG     D+L+P+ ++Q   +  G+ VV  + GD H V L   G  +++G  
Sbjct: 214 WGQNNSGELG----IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 238 YCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
             G  G G +++K T P  +S L      ++ A    T  +   G+ Y FG    G LG 
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLG- 327

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
              G       PR  D L   HV+ +  G + T  V   G +
Sbjct: 328 --NGKIMTQSTPRKTDEL--DHVTGVFAGYHQTFFVRSSGTI 365


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 11/321 (3%)

Query: 46  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
           +  ++H+ Q+SA E H  ++  +G ++TCG N     G +  +     P LV+  KG   
Sbjct: 31  WKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTL 90

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAG 164
             +  GL  +  L   G   + GS++ GQLG    +  +  PK I  L    +V+Q+A G
Sbjct: 91  STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTL-ATKNVIQVACG 149

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
             + + +T NG +Y++G+ S    G G + + E  P+A+ +    GI +  ++ G  H  
Sbjct: 150 SYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSIL--GIPIALIACGSNHTF 207

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 282
           AL  SG V+ WGK   G LG  D   +  P  L +L++     + C      F+ +D G 
Sbjct: 208 ALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLD-GG 266

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V+  G   +G  G    G +   L PR +  L    V+Q++ G  H +      R+   G
Sbjct: 267 VFTCGAGEYGQTG---HGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILACG 322

Query: 343 DNERAQLGHDTLRGCLEPTEI 363
              R QLG   +   L PT +
Sbjct: 323 YGARGQLGCPHMAFALVPTPV 343



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 12/287 (4%)

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 139
           C G+ D    + +P L +  +    +Q++AG   T +L+  GH++TCGSN  GQLG   +
Sbjct: 16  CPGNLDL---VIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTN 72

Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 198
           + D  +P  +   +   ++  IA G  + +A+   G  +S+GS S   LG     H + +
Sbjct: 73  SADGTSPVLVDTFKGC-TLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDK 131

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLS 257
           P+ I+T   K  +V++V+ G  H V L ++G +Y WG    G  G G+  +K T P+ LS
Sbjct: 132 PKIIKTLATK--NVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALS 189

Query: 258 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 317
           S+       +      TF L  +G+V+G+G    G LG  DR   +    P  L +LR  
Sbjct: 190 SILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDR---ESRCYPTHLKTLRNV 246

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            V  IS G   T  +T  G +F  G  E  Q GH   +  L P ++ 
Sbjct: 247 KVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVM 293



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI+ G +HTL +SN+  +++CGS+  G LG    +    S   ++      +  ++    
Sbjct: 39  QISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQ 98

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  + + GQ F+ G +S    G    +    +P++++ L      QV  G   T  LT 
Sbjct: 99  HSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTN 158

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
            G ++  G+N++GQ G G+  ++  TP++++ +  +  +  IA G ++  A++ +G V+ 
Sbjct: 159 NGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGI-PIALIACGSNHTFALSQSGAVFG 217

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  S+  LG  ++     P  ++T R   + V  +S G++    L   G V+T G G  
Sbjct: 218 WGKNSHGQLGLQDRESRCYPTHLKTLR--NVKVCHISCGEDFTAFLTLDGGVFTCGAGEY 275

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           G  GHG+  D+ +P  +  L      QV   +R     V    +   G+   G LG P
Sbjct: 276 GQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILACGYGARGQLGCP 332



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 5/179 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q+  G YHT++++N+  +++ G++  G  G G  + +  +   ++      +  ++   
Sbjct: 144 IQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGS 203

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH   + QSG VF  G NS    G +D     + P  ++ L+ V    ++ G +FT FLT
Sbjct: 204 NHTFALSQSGAVFGWGKNSHGQLGLQDRESRCY-PTHLKTLRNVKVCHISCGEDFTAFLT 262

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVV 177
           + G V TCG+  +GQ GHG+T D   P+ +  +E +GS V Q+A G  +ML   G  ++
Sbjct: 263 LDGGVFTCGAGEYGQTGHGNTKDELVPRKV--MELMGSTVTQVACGRRHMLCRVGERIL 319


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 139/336 (41%), Gaps = 61/336 (18%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           +V+TCG NS    GH DT        LV+  +G     V AG   T  L   G V+T G 
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHC-LVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGY 290

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFC 187
           N +GQ G G T  R    +  P++     VQ+ A  G  + L V  +G + SFG      
Sbjct: 291 NDNGQCGQG-TTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQ 349

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G    E  P+ ++     GI V + S    H V    +G VYT+G+   G LG GD 
Sbjct: 350 LGQGNTSSEPVPKPVRGL--NGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDV 407

Query: 248 IDKTLPEPLSSLKSH------------------LAVQVCAR-------------KRK--- 273
           ID+ LP  + SL+                    + VQ C +             +RK   
Sbjct: 408 IDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVA 467

Query: 274 -------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
                              T VL     V+GFG   +G LG      + +V  P I++  
Sbjct: 468 VKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGH--TTQRVFGPTIIEGA 525

Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +  HV +IS G YHTV++   G LF FG N   QLG
Sbjct: 526 QEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLG 561



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V TCG N++G+LGH DT  R T   + P E    VV +AAG  + + +   G VY+ G 
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHCLVKPFEG-REVVDVAAGNEHTVLLCSTGEVYTAGY 290

Query: 183 GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
             N   G G  Q   +  R      RK + V     G EH + +   G + ++G  Y G 
Sbjct: 291 NDNGQCGQGTTQRVGVLTRVPIDGGRKAVQV-HAYNGCEHTLVVLDDGQMMSFGYNYRGQ 349

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G+   + +P+P+  L      Q       + +  D G VY FG   FG LG  D  V
Sbjct: 350 LGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGD--V 407

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            D+ L P +++SLR   ++ ++ G YHTVV T    +   G N+  QLG ++
Sbjct: 408 IDRKL-PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLES 458



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 10/273 (3%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           HTL++  +  + S G +  G LG G  +++ V    +   +   V Q S S  H+     
Sbjct: 329 HTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVP-KPVRGLNGIRVTQASCSYYHSVIACD 387

Query: 68  SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           +G+V+T G N     G  D  +R +  P LVE+L+G     +  G   T   T+   V +
Sbjct: 388 NGEVYTFGRNDFGQLGSGDVIDRKL--PCLVESLRGQRITTLACGQYHTVVSTLEIGVQS 445

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-- 184
           CG N +GQLG   T  +    ++    +   V  +  G  + + +T    V+ FG     
Sbjct: 446 CGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYG 505

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LGH  Q     P  I+  + K  HV R+SAG  H V +D+ G ++ +G+ + G LG 
Sbjct: 506 QLGLGHTTQR-VFGPTIIEGAQEK--HVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGT 562

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           GD  ++  P P+S+       +V A    T VL
Sbjct: 563 GDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 144/339 (42%), Gaps = 15/339 (4%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVS-FTRINFPSAAHVVQVSAS 58
           + +  G  HT+L+ S   V++ G +  G  G G  TTQ V   TR+        VQV A 
Sbjct: 267 VDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQG--TTQRVGVLTRVPIDGGRKAVQVHAY 324

Query: 59  E--NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFT 115
               H   VL  GQ+ + G N     G  +T+  P+  P+ V  L G+   Q +     +
Sbjct: 325 NGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVTQASCSYYHS 382

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
                 G V+T G N  GQLG GD +DR  P  +  L     +  +A G  + +  T   
Sbjct: 383 VIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRG-QRITTLACGQYHTVVSTLEI 441

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V S G      LG      + +  A++  +  G  V  V  G  H + L +  +V+ +G
Sbjct: 442 GVQSCGKNDYGQLGLESTESQRKFVAVKG-KLDGAQVRHVRCGYYHTIVLTAEEHVFGFG 500

Query: 236 KGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           +   G LG G    +   P  +   +     ++ A    T ++   G ++ FG    G L
Sbjct: 501 RNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQL 560

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           G  D   +++   P  + +     +++++ G YHT+V+T
Sbjct: 561 GTGD---TNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 170/403 (42%), Gaps = 66/403 (16%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           H+L + S+  +++ G +L G LG+  E  +++ V   R+        V VSA  NH+  V
Sbjct: 171 HSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGG-----VTVSAGANHSLAV 225

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
              G V+  GDNS    G   T   +  P  V  ++G     + AG N +  +   G V 
Sbjct: 226 SADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRG--SVAMAAGDNHSLAVRDDGTVW 283

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--- 182
             GSN HGQLG+G  +D   P  +  LE VG+V   AAG ++ LAV  +G V+++GS   
Sbjct: 284 AWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAV---AAGSNHSLAVRDDGTVWAWGSNVE 340

Query: 183 ---------------------------------------GSNFCLGH---GEQHDELQPR 200
                                                  GS +  GH   GE  D     
Sbjct: 341 GQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRN 400

Query: 201 AIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           +    R  G+  VV V+AG  H +AL + G V  WG    G LG G     ++P  +  L
Sbjct: 401 SPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGL 460

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
           +    V V A    +  L+  G+V+ +G+   G LG    G +     P  +  L    V
Sbjct: 461 RG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLG---DGTTTYRYEPVAVKGLEG--V 513

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
             ++ G  H++ V   G  + +G+N + QLG  TL     P E
Sbjct: 514 VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 165/364 (45%), Gaps = 27/364 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H+L +  + +V++ GS++ G  G G  T Q  + TR+     + VV V+A+  H
Sbjct: 316 VAAGSNHSLAVRDDGTVWAWGSNVEGQRGDG-TTGQLSAPTRVP--GVSGVVGVAANVFH 372

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  V   G  +  G NS    G   T N P   P  V+ LK V    V AG + +  L  
Sbjct: 373 SLAVSADGSAWAWGHNSHGELGDGSTRNSPA--PVRVDGLKEVVA--VAAGSSHSLALLA 428

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G NT GQLG G       P  +  L     VV +AAG S+ LA+  +G V+++
Sbjct: 429 DGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLR---GVVAVAAGSSHSLALLADGTVWTW 485

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G   N  LG G      +P A+     KG+  VV V+AG  H +A+ S G  + WG+   
Sbjct: 486 GYNLNGQLGDGTTTYRYEPVAV-----KGLEGVVAVAAGGNHSLAVRSDGTAWAWGENVK 540

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG     D TL    + ++   A +  A  +   + V +    GF W  +G+      
Sbjct: 541 GQLG-----DGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGS---DGFPWA-WGNNSSGQL 591

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
           G      RP  +    A  V  ++ G  H++ ++  G ++ +G N R QLG  TL   L 
Sbjct: 592 GDGSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLA 651

Query: 360 PTEI 363
           PT +
Sbjct: 652 PTRV 655



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 149/346 (43%), Gaps = 25/346 (7%)

Query: 8   YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +H+L +S + S ++ G +  G LG G  T    +  R++      VV V+A  +H+  +L
Sbjct: 371 FHSLAVSADGSAWAWGHNSHGELGDG-STRNSPAPVRVD--GLKEVVAVAAGSSHSLALL 427

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             G V   GDN+    G  D  R     P  V  L+GV    V AG + +  L   G V 
Sbjct: 428 ADGTVLAWGDNTFGQLG--DGTRASHSVPAQVRGLRGVVA--VAAGSSHSLALLADGTVW 483

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           T G N +GQLG G T  R  P ++  LE    VV +AAG ++ LAV  +G  +++G    
Sbjct: 484 TWGYNLNGQLGDGTTTYRYEPVAVKGLE---GVVAVAAGGNHSLAVRSDGTAWAWGENVK 540

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG G       P  ++   +       +S      +A+ S G+ + WG    G LG G
Sbjct: 541 GQLGDGTLTSRPAPVEVKAAAKAVAAAQGLS------LAVGSDGFPWAWGNNSSGQLGDG 594

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
               +  P P+    +   V V A    +  L   G V+ +G    G LG    G  D+ 
Sbjct: 595 STTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLG---EGTLDRR 649

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           L P  +  L              ++ V D G ++ +GDN   QLG+
Sbjct: 650 LAPTRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 163/369 (44%), Gaps = 30/369 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G YH+L +S + +V++ G++  G LG G    +      +    ++ VV V+A  
Sbjct: 113 VAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRA---EPVRVRGSSGVVAVAAGG 169

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H+  V   G ++  GDN     G+R   +++ P      V+ L+      V+AG N + 
Sbjct: 170 AHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEP------VQVLRVTGGVTVSAGANHSL 223

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGN 174
            ++  G V   G N+HGQLG    + R TP    P  + EV   V +AAG ++ LAV  +
Sbjct: 224 AVSADGTVWAWGDNSHGQLG----IARTTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRDD 279

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+++GS  +  LG+G   D  +P  +      G     V+AG  H +A+   G V+ W
Sbjct: 280 GTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGA----VAAGSNHSLAVRDDGTVWAW 335

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G    GD     L  P         V V A    +  +   GS + +G    G L
Sbjct: 336 GSNVEGQ--RGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGEL 393

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G +     P  +D L+   V  ++ G  H++ +   G +  +GDN   QLG  T 
Sbjct: 394 G---DGSTRNSPAPVRVDGLK--EVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTR 448

Query: 355 RGCLEPTEI 363
                P ++
Sbjct: 449 ASHSVPAQV 457



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 131/296 (44%), Gaps = 18/296 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L+++ +V + G +  G LG G   +  V            VV V+A  
Sbjct: 414 VAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLRG---VVAVAAGS 470

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H+  +L  G V+T G N +   G   T    + P  V+ L+GV    V AG N +  + 
Sbjct: 471 SHSLALLADGTVWTWGYNLNGQLGDGTTTYR-YEPVAVKGLEGVVA--VAAGGNHSLAVR 527

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G     G N  GQLG G    RP     AP+E   +   +AA     LAV  +G  ++
Sbjct: 528 SDGTAWAWGENVKGQLGDGTLTSRP-----APVEVKAAAKAVAAAQGLSLAVGSDGFPWA 582

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G+ S+  LG G       P  +Q        VV V+AG+ H +AL   G V+ WG+   
Sbjct: 583 WGNNSSGQLGDGSTTSRPMPMRVQGAG----EVVAVAAGNGHSLALSPEGGVWAWGQNAR 638

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G LG G    +  P  +  L     V V A    +  + D GSV+ +G   FG LG
Sbjct: 639 GQLGEGTLDRRLAPTRVQGLSG--VVAVAAGGAFSLAVRDDGSVWSWGDNAFGQLG 692



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 26/316 (8%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAG 111
            +++   +H+  V Q G V+  G NS    G  D    + R P  V  L GV    V AG
Sbjct: 13  ARIATGGSHSLSVHQDGTVWAVGGNSVGQLG--DGTTSLRRVPVRVLGLSGVVT--VAAG 68

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +  +   G V   G+N+ GQLG G   +R  P  +  L     VV +AAG  + LAV
Sbjct: 69  GGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLS---GVVAVAAGGYHSLAV 125

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           + +G V+++G+ S+  LG G   +  +P  +    R    VV V+AG  H +A+ S G +
Sbjct: 126 SADGTVWAWGNNSSGQLGDGSFDNRAEPVRV----RGSSGVVAVAAGGAHSLAVRSDGIL 181

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           + WG    G LG+  E + +  EP+  L+    V V A    +  +   G+V+ +G    
Sbjct: 182 WAWGDNLYGQLGNRGEFNSS--EPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSH 239

Query: 292 GSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
           G LG     P   +  +V  P +  S+       ++ G  H++ V D G ++ +G N   
Sbjct: 240 GQLGIARTTPLLSIPGRV--PEVRGSV------AMAAGDNHSLAVRDDGTVWAWGSNGHG 291

Query: 348 QLGHDTLRGCLEPTEI 363
           QLG+  +    EP  +
Sbjct: 292 QLGNGFMVDNSEPGRV 307



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 110/253 (43%), Gaps = 16/253 (6%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L+++ +V++ G +L G LG G  T +   +  +       VV V+A  
Sbjct: 464 VAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTYR---YEPVAVKGLEGVVAVAAGG 520

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  V   G  +  G+N     G         RP  VE            GL+    + 
Sbjct: 521 NHSLAVRSDGTAWAWGEN---VKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLA--VG 575

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G     G+N+ GQLG G T  RP P  +   +  G VV +AAG  + LA++  G V++
Sbjct: 576 SDGFPWAWGNNSSGQLGDGSTTSRPMPMRV---QGAGEVVAVAAGNGHSLALSPEGGVWA 632

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG G     L P  +Q         V V+AG    +A+   G V++WG    
Sbjct: 633 WGQNARGQLGEGTLDRRLAPTRVQGLSGV----VAVAAGGAFSLAVRDDGSVWSWGDNAF 688

Query: 240 GALGHGDEIDKTL 252
           G LG+   +  T 
Sbjct: 689 GQLGNAPPVYATF 701


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 26/347 (7%)

Query: 3   ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA   H 
Sbjct: 91  VTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAGGLHN 147

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             + + G V+T G  +    GH    R +  PRL+E         V+AG + +  +T  G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHSAAVTESG 206

Query: 123 HVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A+T +
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIASVYCGGFFTMALTKS 262

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G V TW
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G G  G LGHG   +   P  + ++       +      T  + + G +Y +G      L
Sbjct: 321 GYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQL 380

Query: 295 GFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 335
           G P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 381 GIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 18/271 (6%)

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTE 204

Query: 228 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           SG +YTWG+    G LGHG     DE   + P  + +L   +A   C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCG-GFFTMALTKSG 263

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 372
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 34/380 (8%)

Query: 17  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 75
            V++ G    G +GHG E T+ +         AA            A         TCG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 76  -------DNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
                  +   F  G  D  R         ++P +   +K V  +  +AG      LT  
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRV--QMASAGGLHNIALTEV 153

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
           G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G +Y++
Sbjct: 154 GNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTESGELYTW 211

Query: 181 GSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG +++W
Sbjct: 212 GRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIASVYCGGFFTMALTKSGQLWSW 268

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G G L
Sbjct: 269 GGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQL 328

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG   L
Sbjct: 329 G---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGL 385

Query: 355 RG-CLEPTEI-FIQEMEEDT 372
           +   L+P  + F Q + E T
Sbjct: 386 KDEQLDPVLVQFPQALHEKT 405



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 30/173 (17%)

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 260
           RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+LK     
Sbjct: 18  RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFT 71

Query: 261 --SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVSDK-VLR 307
             + +  ++ A+ R   V V  G           V+ +G    G LG        K  + 
Sbjct: 72  GMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN 131

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 132 PRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  108 bits (270), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 146/330 (44%), Gaps = 24/330 (7%)

Query: 34  ETTQCVSFTRINF----PSA-----AHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCC 82
           E   C +F + NF    PS         V +S  + H A V  +G+++  G N       
Sbjct: 27  EIRGCFTFGKSNFAENIPSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGL 86

Query: 83  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
           G ++T   + +P  V+ALK    K    G N T   T  G+++  G N  GQLG GDT +
Sbjct: 87  GSKNT---VHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEE 143

Query: 143 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
           R T   I+       + Q+AAG     AVT +G ++ +G  S   +G  ++     P  +
Sbjct: 144 RTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQV 203

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSLK 260
                 G  +  +S G  H   +   G +YT+G+   G LG   E  K   +P+P+  + 
Sbjct: 204 DV----GKPISSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIM 259

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
             +    C  +  T VL +TG VY FG   +G LG         V  P+ +  LR   + 
Sbjct: 260 EKVNKVACGGEH-TVVLTETG-VYTFGLGQYGQLGHGTLLFKTSV--PKSVKHLRKCKIR 315

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            I+ G  HT V+ + G +F FGD    +LG
Sbjct: 316 NITCGESHTAVIAENGLMFTFGDGRHGKLG 345



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 16/248 (6%)

Query: 6   GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
           GR HTL+ + N ++++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 112 GRNHTLVYTENGNMYAAGGNGEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSA 170

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            V + GQ+F  GDNS    G  D    +  P  V+   G P   ++ G   + F+T  G 
Sbjct: 171 AVTEDGQLFVWGDNSEGQIGLADKTY-VSVPCQVDV--GKPISSISCGYYHSAFITGDGE 227

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 180
           ++T G   +G+LG    L      S  P   +G    V ++A G  + + +T  GV Y+F
Sbjct: 228 LYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV-YTF 283

Query: 181 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G G    LGHG    +   P++++  R+  I    ++ G+ H   +  +G ++T+G G  
Sbjct: 284 GLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIR--NITCGESHTAVIAENGLMFTFGDGRH 341

Query: 240 GALGHGDE 247
           G LG G+E
Sbjct: 342 GKLGLGEE 349



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 27/258 (10%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVVQIAA 163
            ++ G   T  +T  G ++  GSN  GQLG G  +T+ +PT  K++ P +   +V     
Sbjct: 56  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAV----C 111

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G ++ L  T NG +Y+ G      LG G+  +      I  F  +   + +++AG     
Sbjct: 112 GRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQH-KIKQLAAGSYTSA 170

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLP------EPLSSLKSHLAVQVCARKRKTFVL 277
           A+   G ++ WG    G +G  D+   ++P      +P+SS+        C      F+ 
Sbjct: 171 AVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSIS-------CGYYHSAFIT 223

Query: 278 VDTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
            D G +Y FG    G LG  P++  + +V +P +L  +    V++++ G  HTVV+T+ G
Sbjct: 224 GD-GELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEK--VNKVACGGEHTVVLTETG 279

Query: 337 RLFGFGDNERAQLGHDTL 354
            ++ FG  +  QLGH TL
Sbjct: 280 -VYTFGLGQYGQLGHGTL 296



 Score = 39.3 bits (90), Expect = 3.0,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 2/138 (1%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G YH+  I+ +  +++ G    G LG  PE  +     +        V +V+    H
Sbjct: 212 ISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEH 271

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              + ++G V+T G       GH         P+ V+ L+    + +T G + T  +   
Sbjct: 272 TVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAEN 330

Query: 122 GHVHTCGSNTHGQLGHGD 139
           G + T G   HG+LG G+
Sbjct: 331 GLMFTFGDGRHGKLGLGE 348


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 158/350 (45%), Gaps = 21/350 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G   T+ + N  +V+S G +  G LG G   T   S + +       +  +SA  
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVKGLNGITAISAGW 94

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +   G V+T G   S   G   TN     P  +  L G+    ++AG N T  L 
Sbjct: 95  AHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA--ISAGWNHTLALK 151

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G + + G N +GQLG G+T +   P  +    ++G +  I++G  + L +  +G V+S
Sbjct: 152 ADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGHSLVIKNDGTVWS 208

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  +   LG+G   +   P  I         ++ VSAG  H  AL S G V+ WG  + 
Sbjct: 209 WGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKSDGTVWNWGCNFR 264

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G L +G++ID  +P   + L   +A  + A    +  +   G+ + +G   +G LG    
Sbjct: 265 GELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWGVNDYGQLG---N 319

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           G    V  P  + SL    ++ I TG  +TV +   G +F FG+N   QL
Sbjct: 320 GSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTYGQL 367



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 217
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 336
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+   H
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISSGGGH 196

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           +  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  +  L  
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHSTALKS 252

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  G+L +G+ +D   P     L     ++ I AG  +  A+  +G  + +
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLN---GIIAITAGWEFSSAIKSDGTFWVW 309

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+   G
Sbjct: 310 GVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGENTYG 365

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
            LG+G     T PE +S   +++A    A
Sbjct: 366 QLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+VF 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFA 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ ++   +   VV +  G    +AV  NG +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +G++VV+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 276

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
             +++ K  +  V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V+++G      LG+G  +  L P  + T    G  V  V+ G  H +AL + G V+ W
Sbjct: 94  GEVFAWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVTEVACGSHHTIALTADGEVFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G    G +G G   ++  P  +SS L+S + V V   +  +  ++D G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG  + G      R   + +L+  +V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 13/291 (4%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 84

Query: 117 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
                 T  G V   G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 85  PHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALT 144

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G V+++G  ++  +G G   ++  PR + +  +  + VV V  G    +A+  +G +Y
Sbjct: 145 ADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKV-VVNVGCGQLCSMAVLDNGEIY 203

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYG 263

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 342
            LG  ++  S++ L P ++++ +   V   +    HT    T  G++  +G
Sbjct: 264 QLGTGNK--SNQAL-PTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 150/346 (43%), Gaps = 25/346 (7%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG------PETTQCVSFTRINFPS-----AA 50
           +T G   T +++N+  V+SCG +  G  G G      PE    ++   +  PS       
Sbjct: 49  VTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRV 108

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
            +V       H   V + G++ TCG N+S   GH +  +    PR V    G    +V  
Sbjct: 109 SLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVAC 168

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
             + T  +T      T G N +GQLGHGD   R  P ++A  + +G V+ +A G  + + 
Sbjct: 169 SYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLG-VLSVACGVYHTVV 227

Query: 171 VTGNGVVYSFGSGSNFCLG--HGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
              +G +YSFG   +  LG   GE +   +Q RA  +       V +++ G  H VAL  
Sbjct: 228 SVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV------VEQLACGYYHTVALSR 281

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G V  +G+   G LG G          +  L     +QV      T  L D G VY FG
Sbjct: 282 AGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFG 341

Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
               G LG    G  +   RP  ++ L    V Q++ G YHT+ +T
Sbjct: 342 RNNHGQLG---TGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCLT 384



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 154/357 (43%), Gaps = 24/357 (6%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           ++  G + CG LG G +T +  + T         +V V+A     A +  +G+V++CG N
Sbjct: 13  LYGFGQNACGELGLG-DTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT-------------AGLNFTGFLTIRGHV 124
           S   CG  + +  +  P +V +L  V  ++ +              G      +T  G +
Sbjct: 72  SEGQCGIGEIDETV--PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 125 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
            TCG N  GQLGHG+       P+ +A       V ++A   S+ + VT +   ++FG  
Sbjct: 130 QTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGY-RVTKVACSYSHTVVVTDDDRTWTFGGN 188

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
               LGHG+      P A+  F  +G+ V+ V+ G  H V   +SG +Y++GK   G LG
Sbjct: 189 GYGQLGHGDHSSRSAPAALACF--QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLG 246

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
                 +  P    +  S +    C     T  L   G V  FG   +G LG   R   +
Sbjct: 247 LEGGESRFTPVQHRACTSVVEQLACGYYH-TVALSRAGEVVAFGRNDYGQLGLGHR---E 302

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              +   +  L    + Q++ G YHT+ + D GR++ FG N   QLG  T      P
Sbjct: 303 STWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRP 359



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVV-QVSA 57
           + +  G YHT++ +++  ++S G +  G LG  G E+     FT +   +   VV Q++ 
Sbjct: 216 LSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGES----RFTPVQHRACTSVVEQLAC 271

Query: 58  SENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
              H   + ++G+V   G N       GHR++    ++   V  L G+   QV  G   T
Sbjct: 272 GYYHTVALSRAGEVVAFGRNDYGQLGLGHREST---WQGGQVPDLAGLRIIQVACGSYHT 328

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
             L   G V+  G N HGQLG G   D   P  +  L +   V Q+AAG  + L +TG  
Sbjct: 329 ISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQ-SFVCQVAAGFYHTLCLTGPP 387

Query: 176 VVYSFGSGSNF 186
           +    G GS F
Sbjct: 388 LERKAGHGSAF 398


>gi|363734146|ref|XP_001235085.2| PREDICTED: serine/threonine-protein kinase Nek9 [Gallus gallus]
          Length = 965

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 350 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 409

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 410 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 468

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 469 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 526

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 315
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 527 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 586

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 587 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 621



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 421 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 477

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 478 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 531

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 532 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 591

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 592 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGD 650

Query: 220 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 651 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 709

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 710 HTIIVVE 716



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 357 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 416

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 417 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 475

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 476 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 519



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 133/343 (38%), Gaps = 44/343 (12%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 73
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQ++ 
Sbjct: 390 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYA 440

Query: 74  CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 441 FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 500

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 186
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 501 GRLGLDSEEDHYTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 559

Query: 187 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 241
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 560 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 619

Query: 242 LGHGDEID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           LG GD         L  PL   +    ++V      T    D   ++ +G  G G L   
Sbjct: 620 LGVGDYKKHLGINLLAGPLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMT 676

Query: 298 --DRGVSDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
             +R     +    PR I  SL  HHV  +S   +HT++V ++
Sbjct: 677 PTERAHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTIIVVEK 717



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 42/221 (19%)

Query: 170 AVTGNGVVYSFG--SGSNFCLGHGEQH----DELQPRAIQTFRRKGIHVV---------- 213
           A+  +  VYS+      N CL    +     DEL  + + + RR+ +             
Sbjct: 260 AMEVDSSVYSWELIQMVNSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKR 319

Query: 214 -RVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCA 269
            R S  +E  +A+ +S    VY WG G            K+ P+ L ++KS   A QVCA
Sbjct: 320 PRSSTVNEAPIAVVTSRTSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCA 367

Query: 270 RKRKTFVLVDTGSVYGF-----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
                 V+     +Y +     G    G LG  DR       +P+ ++ L+   + Q+S 
Sbjct: 368 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSC 424

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           G   TV +TD G+L+ FG +    +G D   G   LEP ++
Sbjct: 425 GDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQL 465


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  108 bits (270), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 90/319 (28%), Positives = 148/319 (46%), Gaps = 27/319 (8%)

Query: 58   SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            S+N+  F L   + F   D S FC   + T        LVE         +  G   T  
Sbjct: 781  SQNNLLFQLNENKNFRNID-SEFCTTPQKTMES--SGTLVELFNKKINSVLNCGYGHTAL 837

Query: 118  LTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            +   G ++T G    G LG G T+ R   P+P S+    ++  V+ +A G ++  A+T N
Sbjct: 838  IR-NGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKL-EVLYVACGKNHTTALTNN 895

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            GV Y++G      LG G+ ++   PR I +   +  +V+ +S G  H +AL   G V+ W
Sbjct: 896  GV-YAWGCSKYGQLGLGDVYESPYPRLITSLANE--NVITLSCGQFHTLALTEKGQVFAW 952

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
            G G  G LG G+  D+ LP  ++ LK  +   + A    + VL D G ++ FG   FG L
Sbjct: 953  GWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQL 1012

Query: 295  GFPD----------RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            G  +          +G+S+K++       +   +   IS G +H+ ++T  G ++ +G +
Sbjct: 1013 GTGNTTKSSVPVLIQGISEKIIL------IATGYFHSISCGCHHSALLTVSGGVYTWGRS 1066

Query: 345  ERAQLGHDTLRGCLEPTEI 363
               QLG+   +    PT+I
Sbjct: 1067 LDGQLGNGGHKEVTAPTQI 1085



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 22/264 (8%)

Query: 3    ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA--------HVVQ 54
            +  G  HT LI N ++++ G ++ G LG GP      + +R + PS           V+ 
Sbjct: 828  LNCGYGHTALIRNGTIYTWGQTVKGCLGQGP------TMSRHSLPSPISLLNCFKLEVLY 881

Query: 55   VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
            V+  +NH   +  +G V+  G +     G  D     + PRL+ +L       ++ G   
Sbjct: 882  VACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPY-PRLITSLANENVITLSCGQFH 939

Query: 115  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
            T  LT +G V   G   HGQLG G+  D+  P  +  L++   +  IAAG  + L ++  
Sbjct: 940  TLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKD-QVIKDIAAGHGHSLVLSDK 998

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-----RVSAGDEHVVALDSSG 229
            G ++SFGSG    LG G       P  IQ    K I +       +S G  H   L  SG
Sbjct: 999  GQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSG 1058

Query: 230  YVYTWGKGYCGALGHGDEIDKTLP 253
             VYTWG+   G LG+G   + T P
Sbjct: 1059 GVYTWGRSLDGQLGNGGHKEVTAP 1082


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 10/273 (3%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           L GV   QV+AG+N +  +   G+++  G N+ GQLG+   L+   P  ++  + V +  
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV-TFT 104

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-RKGIHVVRVSAG 218
           Q++AG  + LAV  +G  Y++G  ++  LG+G       P  +       G+ + +V AG
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRKTF 275
             H +A+ S+G +Y+WG    G LG G  +  ++P  +S+      V   QV A  R + 
Sbjct: 165 GFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSL 224

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            +   G  Y +G    G LG    G   +   P ++ +      +Q+S G  H++ V   
Sbjct: 225 AIGSNGKTYAWGEARGGQLGI---GSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSD 281

Query: 336 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 368
           G+ + +G+N+  QLG+ T    L P  + +  M
Sbjct: 282 GKAYAWGNNDSGQLGNATTTSSLAP--VLVSPM 312



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 158/372 (42%), Gaps = 21/372 (5%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q++ G  H+L + S+ ++++ G +  G LG+       V    ++ P      QVSA  +
Sbjct: 53  QVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV-LVSTPDGVTFTQVSAGAD 111

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGF 117
           H+  V   G  +  G N+    G+  T+     P LV A     GV   QV AG    GF
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGN-GTSTGSSVPLLVSAGAVPSGVTISQVMAG----GF 166

Query: 118 LTI----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAV 171
            ++     G +++ G N  GQLG G TL    P  ++       V   Q++AG  + LA+
Sbjct: 167 HSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI 226

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             NG  Y++G      LG G       P  +      G+   +VSAGD H +A+ S G  
Sbjct: 227 GSNGKTYAWGEARGGQLGIGSISRTPAPALVSA--PAGVSFTQVSAGDLHSLAVGSDGKA 284

Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
           Y WG    G LG+        P  +S +      QV A    +  +   G+ Y +G    
Sbjct: 285 YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVN 344

Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
           G LG  +  ++   + P ++ +      ++I  G  H++        + +G N   QLG+
Sbjct: 345 GQLG--NNTITTSTV-PVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGN 401

Query: 352 DTLRGCLEPTEI 363
            T  G L P  I
Sbjct: 402 GTSDGSLVPVAI 413



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF--TRINFPSAAHVVQVSAS 58
           Q+  G +H+L + SN  ++S G +  G LG G      V    +    P+     QVSA 
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAG 219

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  +  +G+ +  G+      G    +R    P LV A  GV   QV+AG   +  +
Sbjct: 220 DRHSLAIGSNGKTYAWGEARGGQLGIGSISR-TPAPALVSAPAGVSFTQVSAGDLHSLAV 278

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G  +  G+N  GQLG+  T     P  ++P+  + +V Q++AG  + LA+  +G  Y
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGL-AVTQVSAGADHSLAIGADGNAY 337

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G   N  LG+        P  +      G+   R+ AG  H +   S    YTWG   
Sbjct: 338 AWGLNVNGQLGNNTITTSTVP--VMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANS 395

Query: 239 CGALGHGDEIDKTLPEPLS 257
            G LG+G      +P  +S
Sbjct: 396 FGQLGNGTSDGSLVPVAIS 414


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 22/355 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+L + ++ SV++ G+S  G+   G  + +   F  +  P  + +V V+A  
Sbjct: 35  VPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRR---FAPVPVPGLSDIVSVAAGG 91

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V   G ++T G N     G   T      P  V  L GV  + V  GL  +  L 
Sbjct: 92  AHSLAVRADGTLWTWGGNPYGQLGDGTTTARAL-PVQVAGLSGV--RAVATGLGHSLALR 148

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T    TP+   P+  +  V  +AAG  + L V  +  V++
Sbjct: 149 ADGTVWAWGLNQFGQLGDGTTSQWLTPR---PIPGLSGVRSVAAGGFHSLVVRDDDTVWA 205

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +GS     LG G       PRAI   R    +V  V+ G  H +A+ + G +  WG    
Sbjct: 206 WGSNDYGELGDGSTSRRAVPRAIPGLR----NVASVAGGCYHSLAVHADGTLSAWGLNSY 261

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-KTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LG G   ++  P P+  L     V+  A     +  L   G+V+ +G  G+G  G  D
Sbjct: 262 GQLGDGTFSNRATPRPVPGLS---GVRCVATSFFHSLALRAEGTVWAWGLNGYGEQG--D 316

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
              S +   PR +  L    V  ++TG +H++ V   G +  +G N + QLG  T
Sbjct: 317 GTASRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGT 369



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 15/279 (5%)

Query: 85  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 144
           R+  RP   P L  A +G P   ++AG + +  +   G V   G++  G    G    R 
Sbjct: 15  REVERPRSAPPLGRAGEG-PRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRF 73

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
            P    P+  +  +V +AAG ++ LAV  +G ++++G      LG G       P  +Q 
Sbjct: 74  AP---VPVPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALP--VQV 128

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 264
               G+  V    G  H +AL + G V+ WG    G LG G       P P+  L     
Sbjct: 129 AGLSGVRAVATGLG--HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG--V 184

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
             V A    + V+ D  +V+ +G   +G LG    G + +   PR +  LR  +V+ ++ 
Sbjct: 185 RSVAAGGFHSLVVRDDDTVWAWGSNDYGELG---DGSTSRRAVPRAIPGLR--NVASVAG 239

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           G YH++ V   G L  +G N   QLG  T      P  +
Sbjct: 240 GCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPV 278



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 17/254 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG  H+L L ++ +V++ G +  G LG G  T+Q ++   I  P  + V  V+A   H
Sbjct: 137 VATGLGHSLALRADGTVWAWGLNQFGQLGDG-TTSQWLTPRPI--PGLSGVRSVAAGGFH 193

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  V     V+  G N     G   T+R    PR +  L+ V    V  G   +  +   
Sbjct: 194 SLVVRDDDTVWAWGSNDYGELGDGSTSRRAV-PRAIPGLRNV--ASVAGGCYHSLAVHAD 250

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N++GQLG G   +R TP+   P+  +  V  +A    + LA+   G V+++G
Sbjct: 251 GTLSAWGLNSYGQLGDGTFSNRATPR---PVPGLSGVRCVATSFFHSLALRAEGTVWAWG 307

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRR-KGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 239
                  G+GEQ D    R   T R   G+  V+ V+ G  H +A++++G V  WG    
Sbjct: 308 -----LNGYGEQGDGTASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQ 362

Query: 240 GALGHGDEIDKTLP 253
           G LG G    ++ P
Sbjct: 363 GQLGDGTATHRSTP 376


>gi|326920825|ref|XP_003206668.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Meleagris
           gallopavo]
          Length = 905

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 290 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 349

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 350 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 408

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 409 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDVPKTLNIV 466

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 315
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 467 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 526

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 527 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 561



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 297 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 356

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 357 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 415

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 416 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDV 459



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 361 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 417

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH A + ++ +V+T G      CG       D+      P+ V+  K +    V  G
Sbjct: 418 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHCTPQKVDVPKTLNIVSVHCG 471

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 472 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 531

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 532 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGD 590

Query: 220 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 591 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 649

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 650 HTIIIVE 656



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 133/343 (38%), Gaps = 44/343 (12%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 73
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQ++ 
Sbjct: 330 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYA 380

Query: 74  CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 381 FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 440

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 186
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 441 GRLGLDSEEDHCTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 499

Query: 187 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 241
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 500 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 559

Query: 242 LGHGDEID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           LG GD         L  PL   +    ++V      T    D   ++ +G  G G L   
Sbjct: 560 LGVGDYKKHLGINLLAGPLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMT 616

Query: 298 --DRGVSDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
             +R     +    PR I  SL  HHV  +S   +HT+++ ++
Sbjct: 617 PTERAHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTIIIVEK 657



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 42/221 (19%)

Query: 170 AVTGNGVVYSFG--SGSNFCLGHGEQH----DELQPRAIQTFRRKGIHVV---------- 213
           A+  +  VYS+      N CL    +     DEL  + + + RR+ +             
Sbjct: 200 AMEVDSSVYSWELIQMVNSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKR 259

Query: 214 -RVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCA 269
            R S  +E  +A+ +S    VY WG G            K+ P+ L ++KS   A QVCA
Sbjct: 260 PRSSTVNEAPIAVVTSRTSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCA 307

Query: 270 RKRKTFVLVDTGSVYGF-----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
                 V+     +Y +     G    G LG  DR       +P+ ++ L+   + Q+S 
Sbjct: 308 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSC 364

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           G   TV +TD G+L+ FG +    +G D   G   LEP ++
Sbjct: 365 GDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQL 405


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 35  YITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSL-SYGSGPHVVLS-TED 92

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYT 233
           G VY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL S G VY 
Sbjct: 93  GEVYAWGHNGYSQLGNGTTNQGVTP--IQVCTNLLIKKVIEVACGSHHSLALSSDGDVYA 150

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +S+ L++ + V +   +  +  +VD G VYG+G+ G G
Sbjct: 151 WGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNG 210

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L+   + QI+ G  HT+ +TD G ++ +G N   QLG  
Sbjct: 211 QLGLGNNG---NQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTG 267

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I +++
Sbjct: 268 NKSNQLSPGQILMEK 282



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 3/239 (1%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A ++  + +VF  G N S C G  D N+    P+ +E+L G   + ++ G      
Sbjct: 29  SANEAIYITHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLESLSGKRIRSLSYGSGPHVV 87

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T    TP  +     +  V+++A G  + LA++ +G 
Sbjct: 88  LSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGD 147

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY++G  +   +G G   ++  PR +    +  I VV ++ G    VA+  +G VY WG 
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKI-VVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
              G LG G+  ++  P  +++L+    +Q+      T  L D G +Y +G   +G LG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG 265



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++   S   +  +S  S  H 
Sbjct: 28  TSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVP-KKLESLSGKRIRSLSYGSGPHV 86

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G+V+  G N     G+  TN+ +   ++   L      +V  G + +  L+  G
Sbjct: 87  VLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDG 146

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V+  G N  GQ+G G T ++PTP+ ++   +   VV IA G +  +A+  NG VY +G 
Sbjct: 147 DVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +     +G+ +++++ G  H +AL   G +Y+WG    G L
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAAL--QGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQL 264

Query: 243 GHGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G G++ ++  P + L   +  + +  C     +     +G VY +G
Sbjct: 265 GTGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H+L L S+  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 130 IEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQ 189

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  ++ +G+V+  G N +   G  +    +  P  V AL+GV   Q+  G   T  LT
Sbjct: 190 TSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVCIMQIACGYAHTLALT 248

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G +++ G+NT+GQLG G+  ++ +P  I  L E   VV+IAA  S     A T +G+V
Sbjct: 249 DEGLMYSWGANTYGQLGTGNKSNQLSPGQI--LMEKERVVEIAACHSAHTSAAKTQSGLV 306

Query: 178 YSFG 181
           Y +G
Sbjct: 307 YMWG 310


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 145/325 (44%), Gaps = 20/325 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 305 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 363

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 168
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 364 EYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVSVACGTWHS 422

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 225
              T NG +++ G G    LGHG++     P+ +Q     G   ++V+ G  H  A+   
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLL--SGHKAIKVACGVWHSAAIIEV 480

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                   S+  ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 540

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            +G V+  G   +G LG P+   SD  +   +   L    V +IS G  H  V+T R  L
Sbjct: 541 TSGHVFTMGGTAYGQLGNPN---SDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSEL 597

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           + +G     +LGH        PT +
Sbjct: 598 YTWGRGANGRLGHGDTDDQKSPTMV 622



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 53
           QI  G  H  L++    VF+ G    G LGHG       P   + ++ T + F       
Sbjct: 307 QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTF------- 359

Query: 54  QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 110
            V+  E H+  V  SG +FT GD +  +   GH  T+   + P+ V   L+G+    V  
Sbjct: 360 -VACGEYHSCAVSSSGDLFTWGDGTHGAGLLGH-GTDVSYWIPKRVSGPLEGLQVVSVAC 417

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G   +   T  G + T G    G LGHGD      PK +  L      +++A G  +  A
Sbjct: 418 GTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSG-HKAIKVACGVWHSAA 476

Query: 171 V----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +          T    ++++G G  + LGH  +   L+P  +        H  +V+ G  
Sbjct: 477 IIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFH--QVACGYT 534

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
             VAL +SG+V+T G    G LG+ +   K        L      ++        VL   
Sbjct: 535 MTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSR 594

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
             +Y +G    G LG  D   +D    P ++++L+  H+  IS G
Sbjct: 595 SELYTWGRGANGRLGHGD---TDDQKSPTMVEALKDRHIKNISCG 636



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 135/296 (45%), Gaps = 19/296 (6%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           G+V+  G++S            +  P+ +E+   +   Q+  G      +T +G V T G
Sbjct: 269 GEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWG 328

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 187
            ++ G+LGHG   D   P  +  L  + +V  +A G  +  AV+ +G ++++G G++   
Sbjct: 329 EDSGGRLGHGFEKDFGRPHLVESLA-ITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAG 387

Query: 188 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG       P+ + +   +G+ VV V+ G  H     S+G ++T G G  G LGHGD
Sbjct: 388 LLGHGTDVSYWIPKRV-SGPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGD 446

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD--------TGSVYGFGWMGFGS---LG 295
                 P+ +  L  H A++V      +  +++        T +   F W G G    LG
Sbjct: 447 RDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTW-GDGDQYRLG 505

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
             ++   +  L P  + ++  ++  Q++ G   TV +T  G +F  G     QLG+
Sbjct: 506 HVNK---ETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGN 558



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 1   MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 413 VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACG 470

Query: 59  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 107
             H+A +++          + ++FT GD   +  GH   N+  +  P  V A+      Q
Sbjct: 471 VWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGH--VNKETYLEPTCVAAVAEYNFHQ 528

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-----QIA 162
           V  G   T  LT  GHV T G   +GQLG+      P      P+   G +V     +I+
Sbjct: 529 VACGYTMTVALTTSGHVFTMGGTAYGQLGN------PNSDGKVPILVRGKLVGEFVEEIS 582

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
            G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  H+  +S G
Sbjct: 583 CGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDR--HIKNISCG 636



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 8/172 (4%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 290 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 347

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 311
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 348 LVESLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 404

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             L    V  ++ G +H+ + T  G+LF  GD     LGH        P E+
Sbjct: 405 GPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEV 456



 Score = 37.7 bits (86), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q+  G   T+ ++ S  VF+ G +  G LG+ P +   V            V ++S   N
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRGKLVGEFVEEISCGAN 586

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H A +    +++T G  ++   GH DT+     P +VEALK    K ++ G  FT  + +
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHGDTDDQK-SPTMVEALKDRHIKNISCGSTFTSCICL 645

Query: 121 RGHV 124
              V
Sbjct: 646 HKWV 649


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 18/299 (6%)

Query: 43  RINFPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 96
           RI +P+         +V++     H   + ++G+V+  G NS F             P  
Sbjct: 127 RIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG-NSEFGQTGLGNKEAQHLPIR 185

Query: 97  VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
           +E  +      V+ GL+ +  ++  G V T G    GQLGH  T D   PK +  +   G
Sbjct: 186 MEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEG 245

Query: 157 SVVQIAAGPSYM-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
            + ++  G  +  L     G +++FG+G    LGHGE+   L+P  +        +V  V
Sbjct: 246 -ISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL-----DNVKEV 299

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKT 274
           +AG  H++AL   G  ++WG G  G LGHG   D   PEP+ +L   +  V V A    +
Sbjct: 300 AAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHS 359

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             L ++G VYG+G+   G LG    G    V+ P ++ +L    V +   GL H++ +T
Sbjct: 360 LALTESGQVYGWGFNASGRLGL---GNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 15/350 (4%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
           V++CG+     LG G      +       P  A  +  +A       +    +++  G +
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 78  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 137
             +       ++ I+ P L E  + +   ++  G      L+  G V+  G++  GQ G 
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174

Query: 138 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 197
           G+   +  P  +    +  S+V ++ G  +  AV+ +G V+++G G +  LGH    DEL
Sbjct: 175 GNKEAQHLPIRMEFFRDK-SIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL 233

Query: 198 QPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPE-- 254
           +P+ +   R +GI   RV+ G +    L ++ G ++T+G G  G LGHG+      P   
Sbjct: 234 KPKELTVIRGEGIS--RVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVV 291

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
           PL ++K     +V A       L   G  + +GW   G LG    G ++  L+P  + +L
Sbjct: 292 PLDNVK-----EVAAGGAHMLALTKDGQAWSWGWGEDGRLG---HGATEDFLKPEPIPTL 343

Query: 315 -RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             A  V  +S G  H++ +T+ G+++G+G N   +LG       + PT I
Sbjct: 344 GPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLI 393



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V+TCG+  + QLG GD  D   P  +  L    S +  AAG +    +T    +Y +GS 
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 184 SNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             + L    +   +  P   +  +  GI  V++  G +H +AL  +G VY WG    G  
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEFGQT 172

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 302
           G G++  + LP  +   +    V V      +  +   G V+ +G+   G LG    G  
Sbjct: 173 GLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGH--NGTE 230

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           D+ L+P+ L  +R   +S+++ G   T ++ +  GRLF FG+ E  QLGH     CLEP+
Sbjct: 231 DE-LKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPS 289

Query: 362 EIFIQEMEE 370
            + +  ++E
Sbjct: 290 VVPLDNVKE 298



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 55/272 (20%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I TGR H + +S N  V+  G+S  G  G G +  Q +   R+ F     +V VS   
Sbjct: 143 VKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPI-RMEFFRDKSIVDVSCGL 201

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
           +H+A V + G+V+T G       GH  T   + +P+ +  ++G    +VT G +FTG L 
Sbjct: 202 DHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL-KPKELTVIRGEGISRVTCGTDFTGLLN 260

Query: 119 -------------------------------------------------TIRGHVHTCGS 129
                                                            T  G   + G 
Sbjct: 261 ETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGW 320

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
              G+LGHG T D   P+ I  L     VV ++AG  + LA+T +G VY +G  ++  LG
Sbjct: 321 GEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLG 380

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
            G +   + P  I+    K   V+R   G +H
Sbjct: 381 LGNESSVMTPTLIKALADK--RVLRAICGLDH 410


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 13/271 (4%)

Query: 83  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
           GH+D ++P F P +VE+L G     +  G + T  L  +G V + G+   G LGHG+  D
Sbjct: 176 GHKD-DKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRD 234

Query: 143 RPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 199
           R +P  I  PL +V +VV +A   ++   ++ +G +Y++G    F LG+ +     + +P
Sbjct: 235 RYSPLMIDGPLRDV-NVVHVACYENHSAVISEDGNLYTWGKAGPF-LGYMDDSVTKQTKP 292

Query: 200 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
           R +      G  +V+V+ G  H + +D  G VY++G    G LG G +   T P  + +L
Sbjct: 293 RLVDALY--GTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL 350

Query: 260 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 319
            S   V  C R     +  D G ++ +GW   G LG   +G    +  P  ++      +
Sbjct: 351 VSICKVS-CGRHHSAAIDED-GVLFMWGWGARGQLG---QGEPKSLFSPTPVNGFNDQPL 405

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             +S G  HT  +T  G  + +GDN  +Q G
Sbjct: 406 EDVSCGYGHTAAITANGVAYCWGDNASSQCG 436



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 12/243 (4%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 182
           ++  G    G+LGH D   R  P  +  L  +G +V  IA G S+ +A+   G V+S+G+
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESL--LGQNVTMIACGGSHTIALNSKGQVFSWGA 221

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
           G   CLGHG   D   P  I    R  ++VV V+  + H   +   G +YTWGK     L
Sbjct: 222 GPQGCLGHGNLRDRYSPLMIDGPLRD-VNVVHVACYENHSAVISEDGNLYTWGKAG-PFL 279

Query: 243 GHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           G+ D+    +T P  + +L     VQV   +  T V+ + G VY FG   FG LG   +G
Sbjct: 280 GYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG---QG 336

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
               + +P ++ +L +  + ++S G +H+  + + G LF +G   R QLG    +    P
Sbjct: 337 HDKAITKPTMVPNLVS--ICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSP 394

Query: 361 TEI 363
           T +
Sbjct: 395 TPV 397



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 18/333 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 60
           I  G  HT+ L S   VFS G+   G LGHG    +  S   I+ P    +VV V+  EN
Sbjct: 200 IACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPLRDVNVVHVACYEN 258

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+A + + G ++T G    F     D+     +PRLV+AL G    QV  G + T  +  
Sbjct: 259 HSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDE 318

Query: 121 RGHVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
            G V++ G N  G+L  GH   + +PT   + P   + S+ +++ G  +  A+  +GV++
Sbjct: 319 EGRVYSFGINKFGELGQGHDKAITKPT---MVP--NLVSICKVSCGRHHSAAIDEDGVLF 373

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G G+   LG GE      P  +  F  + +    VS G  H  A+ ++G  Y WG   
Sbjct: 374 MWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLE--DVSCGYGHTAAITANGVAYCWGDNA 431

Query: 239 CGALGHGDEIDKTLPEPLS-SLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
               G    +   L  P    L S +   Q+      T ++   G ++ +G    G LG 
Sbjct: 432 SSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLG- 490

Query: 297 PDRGVSDKVL-RPRILDSLRAHHVSQISTGLYH 328
              G + K   +P  ++SL    V  ++ G  H
Sbjct: 491 --NGEAKKTFSQPMPVESLSEKRVKMVACGEDH 521



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 12/233 (5%)

Query: 139 DTLDRPTPKSIAPLEEVGSVV-------QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
           D  D     S   +E  GS+V       Q+    + +L    +  +Y +G G    LGH 
Sbjct: 119 DKYDNKEAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHK 178

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           +      P  +++    G +V  ++ G  H +AL+S G V++WG G  G LGHG+  D+ 
Sbjct: 179 DDKPRFLPNVVESLL--GQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRY 236

Query: 252 LPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
            P  +   L+    V V   +  + V+ + G++Y +G  G   LG+ D  V+ K  +PR+
Sbjct: 237 SPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAG-PFLGYMDDSVT-KQTKPRL 294

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +D+L    + Q++ G  HT+V+ + GR++ FG N+  +LG    +   +PT +
Sbjct: 295 VDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMV 347



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 3   ITTGRYHTLLISNSSVFSC----GSSLCGVLGHGPETT--QCVSFTRINFPSAAHVVQVS 56
           ++ G  HT  I+ + V  C     SS CGV    P +   +  S   I  PS     Q++
Sbjct: 408 VSCGYGHTAAITANGVAYCWGDNASSQCGV----PSSVYGELSSPRGIVLPSGIRPTQIN 463

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
              N    V   GQ+FT G N S   G+ +  +   +P  VE+L     K V  G +  G
Sbjct: 464 CGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIG 523

Query: 117 FLTIRGHV 124
            L   G V
Sbjct: 524 CLVGHGWV 531


>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Ailuropoda melanoleuca]
          Length = 348

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  107 bits (268), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 9/249 (3%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAG 164
           ++  G + T  LT  G V   G  + G LG+G  D L+ PT   I+ L       +IAAG
Sbjct: 303 KIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGL----FFNEIAAG 358

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
             + LA+  N  VY +G  +   LG G + ++L P+ +  F RK I    +  GD+H   
Sbjct: 359 AYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSAC 418

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           + ++  +YTWG G    LGHG  +D+  P+ +  L+    + V      +  + + G VY
Sbjct: 419 ITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVY 478

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
            +G      LG P +   D+ L  R+     S R     Q++ G  H++ +++ G L+ +
Sbjct: 479 AWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVW 538

Query: 342 GDNERAQLG 350
           G N+ + LG
Sbjct: 539 GSNKNSLLG 547



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 13/251 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I  G +HT+ L    +VF  G    G LG+G       + T+I+  S     +++A  
Sbjct: 302 VKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNG-RVDDLETPTQIDI-SGLFFNEIAAGA 359

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 118
            H+  + ++ QV+  G N+    G  +    +   +L     K + C+ +  G   +  +
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACI 419

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T    ++T G+  + +LGHG  LD   PK I  L++V  V+ +A G  + L +T  G VY
Sbjct: 420 TTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDV-YVLDVALGTIHSLCITNEGFVY 478

Query: 179 SFGSGSNFCLGHGEQH--DELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           ++GS  +  LG   Q   D+  P+ +    Q+FR    +  +V+AG  H ++L  +G++Y
Sbjct: 479 AWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFY--QVAAGTSHSLSLSENGHLY 536

Query: 233 TWGKGYCGALG 243
            WG      LG
Sbjct: 537 VWGSNKNSLLG 547



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 14/186 (7%)

Query: 184 SNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           S + L   E +  D +QP A++         V++  G  H +AL   G V+ WG G  G 
Sbjct: 277 SQYNLNQAEPNNSDFIQPIALKQ------EFVKIVCGHHHTMALTEEGAVFIWGMGSQGC 330

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG+G   D   P  +  +      ++ A    +  L     VYG+G    G LG    G 
Sbjct: 331 LGNGRVDDLETPTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGI---GN 386

Query: 302 SDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
            +  L P+ L       +    +  G  H+  +T    L+ +G+ +  +LGH  L   +E
Sbjct: 387 KENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEME 446

Query: 360 PTEIFI 365
           P +I I
Sbjct: 447 PKKIEI 452



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 117/312 (37%), Gaps = 48/312 (15%)

Query: 64  FVLQSGQVFTCGDNSS-FCCGHRDTNRPI-----------------FRPRLVEALKGVPC 105
           F+  +G ++ CG N     C +    +                   F P  +   +    
Sbjct: 631 FIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTII 690

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 164
           + ++   N    +T +G+ +  GSN + QLG G   D   TP  +    E   ++    G
Sbjct: 691 RYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITG 750

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
             +   +T  G V+SFG+     LGH  +  +  ++PR I         ++ ++  ++ +
Sbjct: 751 EKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPS----MINLACSNQTM 806

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
            A+D    ++ WG    G LG   + D          +  + +Q   +    F+      
Sbjct: 807 FAIDQKQQLWAWGNNQFGQLGISLQRD----------EEEINLQTNKQVSSEFL------ 850

Query: 283 VYGFGWMG-FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
                W     SL  P+R +  +  +P          V Q+S GLYHT ++T    L   
Sbjct: 851 ----EWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTC 906

Query: 342 GDNERAQLGHDT 353
           G  + A  GH +
Sbjct: 907 GLAKYA--GHQS 916



 Score = 43.9 bits (102), Expect = 0.13,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 25/215 (11%)

Query: 4   TTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV----------------SFTRINF 46
           T G  +T  I N+  +++CGS+  G+L   P   Q                  SFT I  
Sbjct: 623 TLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEI 682

Query: 47  PSAAHVV--QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGV 103
               + +   +S   NH   V   G  +  G N     G    +  +F P L+E A++  
Sbjct: 683 VYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQK 742

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQI 161
                  G  F+  LT +G V + G++  G LGH   +      P+ I    ++ S++ +
Sbjct: 743 VIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMI---NDIPSMINL 799

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           A     M A+     ++++G+     LG   Q DE
Sbjct: 800 ACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDE 834


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 150 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 206
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 265
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 70
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 251 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 295
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 296 -----FPDRGVSDKVLRPRILDSLRAH 317
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 100
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 221 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 280 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 337 RLFGFGDNERAQLGH 351
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 15/361 (4%)

Query: 2   QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +   G  +TL+   + SV++ G++  G LG G    +  S   ++F +   V +V+A  +
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLAS-APVDFSNGMVVKRVAAGGS 99

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA  VL    ++  G N     G   T    F P  V    GV    + A    +  +  
Sbjct: 100 HALAVLSDKTLWAWGRNGDGQLGVGSTTSS-FSPVKVPGRTGVEVVAMAASTFNSAAVLS 158

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V T G N +GQLG+G T D+ +P  ++ L ++  V   + G  +MLA+   G V+++
Sbjct: 159 DGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV---SVGKYHMLALRSGGTVWAW 215

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   +  LG G   +       Q    KG  V  VSAGD H +AL   G V+ WG+   G
Sbjct: 216 GFNGSGQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQG 273

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G   D+  P P+   +    V+V A +     L   G+V+ +G+ G G LG    G
Sbjct: 274 QLGIGSFTDR--PSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLG---DG 328

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            +     P  +  L    V  ++ G  H+V V   GR++ +G N   QLG  +      P
Sbjct: 329 TTLSRSSPVQVPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHP 386

Query: 361 T 361
           T
Sbjct: 387 T 387



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G   TL   N   +++ G +  G LG    T   ++   ++  S   V  V+A   
Sbjct: 464 RLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD-DSTVNRLTPVSVSTASLTDVKNVAAGGF 522

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H+  +   G++++ G NS    G    +R     R   AL       V      T  L +
Sbjct: 523 HSLALGSDGKLWSWGSNSLSQLG---VSRDTLGSRASPALVSGVSGVVAVAAGETHSLVV 579

Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 176
              G V   G N +GQ+G G +   PT    +P E     S++ +AAG ++ LA+  +G 
Sbjct: 580 LSNGKVSAWGYNGYGQIGDGCS-PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G  ++  LG G   D  +P  +    R    VV V AG  H +AL S G V+ WG 
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRPVQVARLNR----VVSVVAGLYHSLALRSDGTVWAWGD 694

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G    + LP  +  L     V V A  R +  L   G+V+ +G+   G +G 
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSG--VVAVAAGGRHSLALRADGTVWAWGYNSNGQIG- 751

Query: 297 PDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            D   +  + RP  +  L +    V  ++ G  H+V V   GR+  +G N+  QLG+ T
Sbjct: 752 -DGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYAT 809



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 33/293 (11%)

Query: 75  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
           GD  SF C        +  PRLV            AG  FT F    G +   G N  GQ
Sbjct: 451 GDGCSFVC-------RLETPRLV------------AGAKFTLFQKNDGKLWAWGHNFSGQ 491

Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
           LG   T++R TP S++    +  V  +AAG  + LA+  +G ++S+GS S   LG     
Sbjct: 492 LGDDSTVNRLTPVSVS-TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLG--VSR 548

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-- 252
           D L  RA          VV V+AG+ H + + S+G V  WG    G +G G     T   
Sbjct: 549 DTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYC 608

Query: 253 --PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             P   ++L S L V   A +  +  L   G+V+ +G    G LG  D  + D   R R 
Sbjct: 609 SSPTEPTNLFSILGV--AAGQNHSLALRSDGTVWAWGRNNSGQLG--DGSLVD---RTRP 661

Query: 311 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +   R + V  +  GLYH++ +   G ++ +GDN   QLG  T  G + P ++
Sbjct: 662 VQVARLNRVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV 714



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 22/255 (8%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHG---PETTQCVSFTR-INFPSAAHVVQVSASENHAA 63
           H+L++ SN  V + G +  G +G G     T  C S T   N  S   ++ V+A +NH+ 
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS---ILGVAAGQNHSL 631

Query: 64  FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +   G V+  G N+S   G     D  RP+   RL   +       V AGL  +  L  
Sbjct: 632 ALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVS------VVAGLYHSLALRS 685

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQLG G    +  P  +  L     VV +AAG  + LA+  +G V+++
Sbjct: 686 DGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLS---GVVAVAAGGRHSLALRADGTVWAW 742

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           G  SN  +G G     + +P  ++        V+ V+AGD H VA+ S G V TWG+   
Sbjct: 743 GYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDS 802

Query: 240 GALGHG-DEIDKTLP 253
           G LG+  +  D++ P
Sbjct: 803 GQLGYATNNTDRSTP 817



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 56/306 (18%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ-IAAG 164
           +  AG  +T      G V T G+N+ GQLG G T  R    + AP++   G VV+ +AAG
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYR---LASAPVDFSNGMVVKRVAAG 97

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            S+ LAV  +  ++++G   +  LG G       P  ++   R G+ VV ++A   +  A
Sbjct: 98  GSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAA 155

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           + S G V TWG    G LG+G   D++ P  +S+L     V V   K     L   G+V+
Sbjct: 156 VLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVG--KYHMLALRSGGTVW 213

Query: 285 GFG-------------------------------------------WMG----FGSLGFP 297
            +G                                           W G    +G     
Sbjct: 214 AWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQG 273

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G+     RP  +   R   V +++ G +H + +   G ++ +G N   QLG  T    
Sbjct: 274 QLGIGSFTDRPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSR 333

Query: 358 LEPTEI 363
             P ++
Sbjct: 334 SSPVQV 339


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 154/346 (44%), Gaps = 22/346 (6%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           + TG YH+L I+ S +V++ G +    LG   +  +    T +   +A   V  +   + 
Sbjct: 40  VATGYYHSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITA---VAGAVGLDF 96

Query: 62  AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +  V  +G+V+T G  +      G          PR V+ L       V  G      LT
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALT 156

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V + G    GQLG G  + R +P+ IA L   G VV +AAG +Y LAVTG   VY+
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLAVTGADQVYA 215

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           FGS S   LG G+     +P  ++     G  V  V+AGD H +A   +G++Y WG    
Sbjct: 216 FGSNSKGQLGVGDTTARFRPTLVRFL--DGKQVCHVTAGDFHTLARTRTGHLYAWGSNQW 273

Query: 240 GALGHGDEIDKTLP--EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWM 289
           G LG G E D      E    L+    ++V A +R T  L+ T +  G        FG  
Sbjct: 274 GQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGAN 333

Query: 290 GFGSLGF-PDRGVSDK--VLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G LG  PD   S +  +  P  L  + + H  ++  G  HT+++
Sbjct: 334 NTGQLGLDPDHPASKRTQLFHPVRLKRISSMHPIKLIAGGNHTIMI 379



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 8/248 (3%)

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +T  G V+T G N   QLG     D      + PLE + +V   A G  + + V   G V
Sbjct: 50  ITRSGTVYTTGKNDRRQLGRSG--DEHKWARVTPLETITAVAG-AVGLDFSVVVDSTGKV 106

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGK 236
           Y++G G    LG G +  E   R  +  +  G   V+ V+ G  H +AL   G V++WG+
Sbjct: 107 YTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGE 166

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LG G  + +  PE ++ L+    V V A    +  +     VY FG    G LG 
Sbjct: 167 GADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGV 226

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            D   +    RP ++  L    V  ++ G +HT+  T  G L+ +G N+  QLG  +   
Sbjct: 227 GD---TTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEAD 283

Query: 357 CL-EPTEI 363
            +  PTEI
Sbjct: 284 SVAAPTEI 291



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 22/249 (8%)

Query: 124 VHTCGSNTHGQLGHGDTLDR-PTPKSIAP-LEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           V   G+   GQLG GD      T  ++ P LE+   +  +A G  + LA+T +G VY+ G
Sbjct: 3   VAVWGATGAGQLGIGDADGTGKTRVTLVPSLEQ--ELAFVATGYYHSLAITRSGTVYTTG 60

Query: 182 SGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
                 LG  G++H   +   ++T     I  V  + G +  V +DS+G VYTWG G  G
Sbjct: 61  KNDRRQLGRSGDEHKWARVTPLET-----ITAVAGAVGLDFSVVVDSTGKVYTWGGGERG 115

Query: 241 ALGHGDEIDKT---LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-- 295
            LG G E  +T   +P P+  L +   + V    R    L   G V+ +G    G LG  
Sbjct: 116 QLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDG 175

Query: 296 -FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
            F  R        P ++  LR   V  ++ G  +++ VT   +++ FG N + QLG    
Sbjct: 176 QFVSRH------SPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDT 229

Query: 355 RGCLEPTEI 363
                PT +
Sbjct: 230 TARFRPTLV 238


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI 67

Query: 150 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 206
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 265
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 70
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 251 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 295
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 296 -----FPDRGVSDKVLRPRILDSLRAH 317
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 161/367 (43%), Gaps = 21/367 (5%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G +H++ L S+ +V + G ++ G LG G  T + +    +      +V  ++   
Sbjct: 61  LQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIP---VQVKDLNNVTAIAGGA 117

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G V+T G N +   G   T +   +P  V  LK +         N    L 
Sbjct: 118 WHSVALTSDGTVWTWGSNWAGQLGD-GTTKSRNKPVQVNNLKNITAIASKGLHNLA--LK 174

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V T G N +GQLG G T DR TP     L    +++ IA G  + LA   +G +++
Sbjct: 175 SDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN---TIISIAGGGYHSLAQKADGTIWT 231

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG G   +   P  +   +     V  +  G +H + L ++G ++ WG    
Sbjct: 232 WGLNQYGQLGDGTITNRTIPVLVNGIK----DVSMIRCGGDHSIVLKNNGTIWIWGFNQH 287

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LG     +++ P P+  LK+ + +        + +L   G+V+ +G    G LG    
Sbjct: 288 GQLGDRSTDNRSTPVPMGDLKNIMTID--GGGDHSLILKSDGTVWTWGNNENGQLGD--- 342

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 359
                + R   + +    +V+ I++G  H++ +   G ++ +G N   QLG  ++     
Sbjct: 343 --GTTMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRST 400

Query: 360 PTEIFIQ 366
           P  + I+
Sbjct: 401 PVLVKIK 407



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 25/318 (7%)

Query: 49  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQ 107
           A+ ++QVS    H+  +   G V T G N     G   +T+R I  P  V+ L  V    
Sbjct: 57  ASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI--PVQVKDLNNVTA-- 112

Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
           +  G   +  LT  G V T GSN  GQLG G T  R  P  +  L+   ++  IA+   +
Sbjct: 113 IAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLK---NITAIASKGLH 169

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            LA+  +G V+++G      LG G   D    +Q R++ T       ++ ++ G  H +A
Sbjct: 170 NLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT-------IISIAGGGYHSLA 222

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
             + G ++TWG    G LG G   ++T+P  ++ +K  +++  C     + VL + G+++
Sbjct: 223 QKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKD-VSMIRCGGDH-SIVLKNNGTIW 280

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G+   G LG  DR  +D    P  +  L+  ++  I  G  H++++   G ++ +G+N
Sbjct: 281 IWGFNQHGQLG--DRS-TDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNN 335

Query: 345 ERAQLGHDTLRGCLEPTE 362
           E  QLG  T      P +
Sbjct: 336 ENGQLGDGTTMSRATPIQ 353


>gi|329927260|ref|ZP_08281541.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
 gi|328938563|gb|EGG34947.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
          Length = 1058

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 176/396 (44%), Gaps = 28/396 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSA-------AH 51
           + I++  YHTL L+ N +V S GS++ G LG+G +      SF +  + +        A+
Sbjct: 21  VSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGLNFSTSFAQPVYENVNGELKVLAN 80

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +V V AS+ ++  +   G V+  G N+S   G R      + P  +      P +Q++AG
Sbjct: 81  IVAVEASQQYSLALSADGTVYGWGLNASNELG-RPFEGTYYYPTAISIAGLPPIEQISAG 139

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           +     L   G V   G N  G +G+G   + ++RP        E +  + QI AG  + 
Sbjct: 140 VTHAAALAKDGTVWAWGDNQSGAVGNGRQMEYVERPVQVKKNASEFLTGIKQIHAGNWFT 199

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDS 227
           +AVT NG +  +G    + LG         P  A+   +     + +VS G+++ +AL  
Sbjct: 200 MAVTENGELLGWGYNGAYQLGDLTLVSHSYPVHALDKNKNPLNGIKKVSTGNDYTLALKE 259

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFVLVDT 280
            G + +WG    G LG  D +  T    P+P+    S  A    V + A       + + 
Sbjct: 260 DGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAAIRED 318

Query: 281 GSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDR 335
           GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV++ D 
Sbjct: 319 GSVWTWGGNTIWGSADITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIMLDN 378

Query: 336 GRLFGFGDNERAQLGHDTLRG-CLEPTEIFIQEMEE 370
           G L+  G N   QLG     G  +EPT++ +   ++
Sbjct: 379 GTLWSMGSNREKQLGGGYKMGSAIEPTQLSLSHYDK 414



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 136
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 3   TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 51

Query: 137 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           +G        +  +P  +++   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 52  NGKQGLNFSTSFAQPVYENVNGELKVLANIVAVEASQQYSLALSADGTVYGWGLNASNEL 111

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G ++
Sbjct: 112 GRPFEGTYYYPTAISIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGRQM 169

Query: 249 D---------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---- 295
           +         K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG    
Sbjct: 170 EYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGAYQLGDLTL 224

Query: 296 ----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
               +P   + DK   P        + + ++STG  +T+ + + G L  +G N   QLG 
Sbjct: 225 VSHSYPVHAL-DKNKNP-------LNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGS 276

Query: 352 DTLRGC 357
           DTL+G 
Sbjct: 277 DTLQGT 282


>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
          Length = 1384

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 21/264 (7%)

Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 165
           + V  G      +T+   V T G  + GQLGHG+      P  +  L+   S++Q   G 
Sbjct: 544 RDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKG-KSIIQARCGE 602

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDE 220
            + L  + NG++ + G G+  CLGHG+     +PR I+   R       + VV V+ G  
Sbjct: 603 EFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-TFVLVD 279
           HV  + S   V+TWG+G  G LG G E D   P+ ++ +  +L+++ C   R  T +L D
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVT-VPDNLSIKECHCGRDGTLLLTD 721

Query: 280 TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRA---HHVSQISTGL 326
            GS+   G      LG   R              +V   +I   +R    H V  IS G 
Sbjct: 722 VGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGP 781

Query: 327 YHTVVVTDRGRLFGFGDNERAQLG 350
           +H+ VV + G ++ FG N + QLG
Sbjct: 782 HHSAVVVEPGHVYTFGKNSKGQLG 805



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H ++I+    VF+ G    G LGHG     C   + +       ++Q    E  
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHG-NLESCHVPSLVEGLKGKSIIQARCGEEF 604

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-------KGVPCKQVTAGLNF 114
           + F   +G + TCGD ++ C GH D      RPRL+EAL         V    V  G + 
Sbjct: 605 SLFASDNGIIMTCGDGTAGCLGHGDWC-STSRPRLIEALLRDQLSLYSVDVVSVACGSHH 663

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
              +     V T G   +G+LG G   D   P+ +   + + S+ +   G    L +T  
Sbjct: 664 VCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNL-SIKECHCGRDGTLLLTDV 722

Query: 175 GVVYSFGS--GSNFCLGHGE----------QHDELQPRAIQTFRRKGIH--VVRVSAGDE 220
           G + + G+  G+   L H +             E+    I T  R+     VV +S G  
Sbjct: 723 GSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPH 782

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
           H   +   G+VYT+GK   G LG G+  ++  P
Sbjct: 783 HSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAP 815



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 12/208 (5%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           +  +A G  +++ +T   +V+++G GS   LGHG       P  ++    KG  +++   
Sbjct: 543 IRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGL--KGKSIIQARC 600

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQVCAR 270
           G+E  +    +G + T G G  G LGHGD    + P  +        SL S   V V   
Sbjct: 601 GEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACG 660

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                V+     V+ +G    G LG    G      +P+ +       + +   G   T+
Sbjct: 661 SHHVCVVGSESEVFTWGRGKNGRLGL---GSEQDFCQPQEVTVPDNLSIKECHCGRDGTL 717

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCL 358
           ++TD G +   G+NE  +LG +  +G L
Sbjct: 718 LLTDVGSMLACGNNEGNKLGLNHRQGFL 745



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 103/276 (37%), Gaps = 45/276 (16%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
           +Q   G   +L  S N  + +CG    G LGHG       P   + +   +++  S   V
Sbjct: 596 IQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSV-DV 654

Query: 53  VQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           V V+   +H   V    +VFT G   N     G   + +   +P+ V     +  K+   
Sbjct: 655 VSVACGSHHVCVVGSESEVFTWGRGKNGRLGLG---SEQDFCQPQEVTVPDNLSIKECHC 711

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHG-------------DTLDRPTPKSIAPLEEV-- 155
           G + T  LT  G +  CG+N   +LG                  +    K   P+ E+  
Sbjct: 712 GRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCR 771

Query: 156 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-- 213
             VV I+ GP +   V   G VY+FG  S   LG G   ++  P  ++ F  K   V   
Sbjct: 772 HRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPIQVKAFEDKPAFVCKF 831

Query: 214 --------------RVSAGDEHVVALDSSGYVYTWG 235
                         RV  G+ + VA      +Y WG
Sbjct: 832 LCYVAFSEICSSLQRVRCGESYTVAGTVDNGLYFWG 867



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           V+ G  HV+ +     V+TWG+G  G LGHG+     +P  +  LK    +Q    +  +
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQARCGEEFS 605

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS-------QISTGLY 327
               D G +   G    G LG  D   +    RPR++++L    +S        ++ G +
Sbjct: 606 LFASDNGIIMTCGDGTAGCLGHGDWCSTS---RPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 328 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           H  VV     +F +G  +  +LG  + +   +P E+ +
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTV 700


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 161/373 (43%), Gaps = 50/373 (13%)

Query: 14  SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPS--AAHVVQVSASENHAAF 64
           S   V+S G+   G LG       H P+     S + I+  +   AHV+ ++++      
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA------ 69

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
               G+  + G  +S   GH +       P+ V +L G     V+AG + +GF++  G V
Sbjct: 70  ----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFV 125

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            TCG  + GQLGHGD     +P  ++   ++  V Q+A G  + L +     VY FGSG 
Sbjct: 126 FTCGDGSFGQLGHGDNASHCSPVKVSCFVDL-HVAQVACGMRHSLVLLKGNQVYGFGSGK 184

Query: 185 NFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
              L  G  +D ++    P+ +  F  +G+ +V  +A  +H  A+   G+VYTWG+G+ G
Sbjct: 185 RGQL--GVSNDRVKSVNVPKVVSGF--EGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKG 240

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----- 295
                   D  +P+ L+S  S    +V         +   G VY  G    G L      
Sbjct: 241 FE------DAHVPQCLNS--SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292

Query: 296 -----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                FPD     +      +  L    ++ I+ G  H+V+VT+ G +  +G  E  QLG
Sbjct: 293 GPAKHFPDL----REFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLG 348

Query: 351 HDTLRGCLEPTEI 363
               R    P  +
Sbjct: 349 LGDTRDQTSPVTV 361



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 19/265 (7%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            ++ G  H+  +S++  VF+CG    G LGHG   + C S  +++     HV QV+    
Sbjct: 108 HVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHC-SPVKVSCFVDLHVAQVACGMR 166

Query: 61  HAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           H+  +L+  QV+  G       G   D  + +  P++V   +GV      A  + +  ++
Sbjct: 167 HSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVS 226

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           + GHV+T G    G        D   P+    L    +  ++A G ++ LA++G G VY 
Sbjct: 227 VDGHVYTWGRGFKG------FEDAHVPQC---LNSSLNFTKVALGWNHALAMSGEGEVYM 277

Query: 180 FGSGSNFCL------GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVY 232
            G      L      G  +   +L+   ++      G  +  ++AG EH V +   G + 
Sbjct: 278 LGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIK 337

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLS 257
           TWG G  G LG GD  D+T P  +S
Sbjct: 338 TWGWGEHGQLGLGDTRDQTSPVTVS 362



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 121/305 (39%), Gaps = 25/305 (8%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L S     S G    G LGHG   +  +    +       +  VSA  +H+ FV
Sbjct: 60  GAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFV 119

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             +G VFTCGD S    GH D N     P  V     +   QV  G+  +  L     V+
Sbjct: 120 SDTGFVFTCGDGSFGQLGHGD-NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVY 178

Query: 126 TCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
             GS   GQLG  +   +    PK ++  E V  +V  AA   +  AV+ +G VY++G G
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGV-EIVGTAANGDHSAAVSVDGHVYTWGRG 237

Query: 184 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
              F        D   P+ + +     ++  +V+ G  H +A+   G VY  G  + G L
Sbjct: 238 FKGF-------EDAHVPQCLNS----SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286

Query: 243 GHGDEID--KTLP-------EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
                I   K  P       E +  L       + A    + ++ + G +  +GW   G 
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346

Query: 294 LGFPD 298
           LG  D
Sbjct: 347 LGLGD 351



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 2/126 (1%)

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           +S   V++WG G  G LG     D+  P+ L          +         L   G    
Sbjct: 15  ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALS 74

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
           +G    G LG  +  V    L P+ + SL  + ++ +S G  H+  V+D G +F  GD  
Sbjct: 75  WGRGNSGQLGHGE--VVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGS 132

Query: 346 RAQLGH 351
             QLGH
Sbjct: 133 FGQLGH 138


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 9/291 (3%)

Query: 88  NRPIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           N PIF     + +  +    V   L N    +T  G V+  GSNT G LG GD+     P
Sbjct: 8   NWPIFSLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHP 67

Query: 147 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           K +  L   G       +GP ++LA+T  G +YS+G      LG+G  +  L P      
Sbjct: 68  KKVEALCGKGIKTFAYGSGP-HVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNL 126

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLA 264
             K   V  ++ G  H VAL   G VY+WG+  CG +  G   ++  P  + S+L   + 
Sbjct: 127 NEK--VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVV 184

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +  +  + D G V+G+G+ G G LG    G     L P  +  L    + +++ 
Sbjct: 185 VSIACGQTSSMAVTDVGEVFGWGYNGVGQLGI---GNYVNQLSPCKVTGLNGIVIEKVAC 241

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           G  HT+ ++D G L+ +G N   QLG         P ++ + EM   + +A
Sbjct: 242 GYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEMGRISDIA 292



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 12/308 (3%)

Query: 40  SFTRINFPSAAHVVQVSASE-NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 98
           S     F S  H+  V  +  N A  V + G V+  G N++ C G  D++  +  P+ VE
Sbjct: 13  SLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTL-HPKKVE 71

Query: 99  AL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
           AL  KG+      +G +    LT +G +++ G N + +LG+G T    TP     L E  
Sbjct: 72  ALCGKGIKTFAYGSGPHVLA-LTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNE-K 129

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
            V  IA G  + +A+T +G VYS+G  +   +  G   ++  PR + +    G  VV ++
Sbjct: 130 VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNS-ALTGKVVVSIA 188

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            G    +A+   G V+ WG    G LG G+ +++  P  ++ L   +  +V      T  
Sbjct: 189 CGQTSSMAVTDVGEVFGWGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLA 248

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH--TVVVTD 334
           L D G++Y +G  GFG LG  ++        P  L+      +S I+T  Y+  +V +  
Sbjct: 249 LSDEGALYVWGGNGFGQLGLGNKA---NACTPIKLNVTEMGRISDIATLHYNHISVAMGQ 305

Query: 335 RGRLFGFG 342
            G+++ +G
Sbjct: 306 GGKIYMWG 313


>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 439

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG-QLGHGDTLDRP------TP 146
           P  + AL+G+    V AG N + FLT  G V+ CG + +G QLG     +         P
Sbjct: 84  PARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVP 143

Query: 147 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           + ++ L++V  VV+IAAGP++ L +T    VYSFG      LG G+  +   P  ++  R
Sbjct: 144 ERVSGLDDV-VVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTPTLVEALR 202

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGK-GYCGALGHGDEIDKTLPEPLSSLK-SHLA 264
             G  +V+V AGD +  A+  SG V+ WG    C  L   D    TL E LS    + +A
Sbjct: 203 --GEEIVQVVAGDTNSAAITKSGQVFMWGSCRSCIDLPSNDPTKPTLVEALSGTPIAAVA 260

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLR-PRILDSLRAHHVSQ 321
           +  C        L   G V   G   +  G LG+  R    K  R PR +        + 
Sbjct: 261 LGEC----HCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEVAAA 316

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           I+ G  H++V+T  GRLF FGDN   QLG
Sbjct: 317 IAAGEGHSLVLTRDGRLFAFGDNRSGQLG 345



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 158/361 (43%), Gaps = 32/361 (8%)

Query: 28  VLGHG----PETTQCVSFT---RINFPSAAHVVQVSASENHAAFVLQSGQVFTCG----- 75
           VLGH     P + Q V +    RI       +  V+A ENH+ F+   GQV+ CG     
Sbjct: 64  VLGHPRQEEPSSHQGVRWAAPARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNG 123

Query: 76  DNSSFC-CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
               F  C   D  +  + P  V  L  V   ++ AG   +  LT    V++ G N +G 
Sbjct: 124 SQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGH 183

Query: 135 LGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           LG GD  +R TP  +  L  EE   +VQ+ AG +   A+T +G V+ +GS  + C+    
Sbjct: 184 LGLGDYENRWTPTLVEALRGEE---IVQVVAGDTNSAAITKSGQVFMWGSCRS-CIDL-P 238

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGH----GD 246
            +D  +P  ++     G  +  V+ G+ H + L + G V + G    + G LG+      
Sbjct: 239 SNDPTKPTLVEAL--SGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNP 296

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF----PDRGVS 302
             ++ +P P+      +A  + A +  + VL   G ++ FG    G LG     P+  VS
Sbjct: 297 RKEQRVPRPIPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVS 356

Query: 303 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
                P  + +L    V+ +     H+  +   G ++ FGD E  QLGH T      P +
Sbjct: 357 KPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKK 416

Query: 363 I 363
           I
Sbjct: 417 I 417



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 25/294 (8%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           ++I  G  H+L L S ++V+S G +  G LG G    +    T +       +VQV A +
Sbjct: 155 VKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEALRGEEIVQVVAGD 213

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            ++A + +SGQVF  G   S  C    +N P  +P LVEAL G P   V  G     FLT
Sbjct: 214 TNSAAITKSGQVFMWGSCRS--CIDLPSNDPT-KPTLVEALSGTPIAAVALGECHCLFLT 270

Query: 120 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAV 171
             G V +CG + +  G LG+ D  D P  +   P        EV +   IAAG  + L +
Sbjct: 271 TDGLVLSCGLDLYHSGLLGY-DVRDNPRKEQRVPRPIPHFTGEVAAA--IAAGEGHSLVL 327

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVA 224
           T +G +++FG   +  LG G    EL        P  +       + V  V A   H  A
Sbjct: 328 TRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAH--VQVAGVVAAPLHSCA 385

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           +   G VY++G G    LGHG      +P+ + +L       + + +  T  L+
Sbjct: 386 IAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTLALL 439


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 38/352 (10%)

Query: 9   HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H++LIS     +S G + CG LG G  TT+ +    I      +++  +   NH+ FV  
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIP-EPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +G V+ CGDN S  CG   T   I  P  V    G P  +V  G  F+  L   G +H+ 
Sbjct: 181 TGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAEFSMILDCNGALHSF 239

Query: 128 GSNTHGQLGH---GDTLDRPT---------PKSIA------------PLEEVGSVVQIAA 163
           G   +GQLGH   G      T         PK IA            P+++V  +V  + 
Sbjct: 240 GLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDV-DIVDFSC 298

Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
           G ++ +A+      YS+G G    LGH EQ DE  PR I+ F  +   V  V  G  + +
Sbjct: 299 GNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVHCGATYSL 358

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           A++  G ++ +G+      G  +      P+P+  L +   ++       + V+    S+
Sbjct: 359 AVNEHGALFMFGQ--TKRTGEAN----MYPKPVQDL-TGWNIRSVGTSNTSIVIAADDSL 411

Query: 284 YGFGWM-GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             +G    +G LG  D  ++    RP+ +  +   +++Q++ G  HT++++D
Sbjct: 412 IAWGVSPTYGELGTGD--INKSTARPKEVTRMEGLNITQVAMGYSHTLLLSD 461



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 32/231 (13%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           S  H+  +   G+ ++ G NS    G  DT  R I  P  +  LKG        G N + 
Sbjct: 119 SAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNIIHAAVGRNHSL 176

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAAGPSYMLAVTG 173
           F+T  G V+ CG N   Q G G T    TP+ + P  +   G+ +V++  G  + + +  
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGHT----TPQILVPTRVRYTGAPIVKVGCGAEFSMILDC 232

Query: 174 NGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRKG----------IH 211
           NG ++SFG      LGH               H E+ P+ I  F  K           + 
Sbjct: 233 NGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVD 292

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
           +V  S G+ H VA+DS    Y+WG G  G LGH ++ D+++P  +    S 
Sbjct: 293 IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQ 343



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H + + + G  Y++G+  CG LG GD   + +PEP+ +LK    +     +  +  + DT
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTDT 181

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVVVTDRG 336
           G+VY  G       G            P+IL   R  +    + ++  G   ++++   G
Sbjct: 182 GTVYACGDNKSAQCGLGH-------TTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNG 234

Query: 337 RLFGFGDNERAQLGHDT 353
            L  FG  E  QLGH+T
Sbjct: 235 ALHSFGLPEYGQLGHNT 251



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 34/239 (14%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            ++  G  ++ G N+ GQLG GDT  R  P+ I  L+   +++  A G ++ L VT  G 
Sbjct: 125 LISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGF-NIIHAAVGRNHSLFVTDTGT 183

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY+ G   +   G G  H   Q       R  G  +V+V  G E  + LD +G ++++G 
Sbjct: 184 VYACGDNKSAQCGLG--HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNGALHSFGL 241

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LGH  +                           + +  T   Y F  +      F
Sbjct: 242 PEYGQLGHNTD-------------------------GKYFVTSTKLSYHFEMVPKHIAFF 276

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            ++     V   + +D      +   S G  HTV +  + R + +G     +LGH   R
Sbjct: 277 FEKSKDGHVSPVKDVD------IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQR 329


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+Q++  + H+  +   GQ+F  G+N+    G R     I  P+ +++L G+P  Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTVSISCGGEHTATL 238

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGY 230
           +  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H + L + +  
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPL 256
           +Y++G G  G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 215
            V+QIA G  + +A++ +G ++ +G  ++  LG  ++   +Q P+ +Q+    GI V ++
Sbjct: 119 KVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC--GIPVAQI 176

Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           SAG  H   L  SG V+ WG    G LG GD  D+ +P  + SL     V +      T 
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTA 236

Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTD 334
            L   G+V+ FG  GFG LG     + D+   PR++  L    VSQ++ G +HT V+V  
Sbjct: 237 TLSKGGTVFTFGSGGFGQLG--HNSLKDE-HHPRLVAELWGSKVSQVTCGRHHTLVLVAL 293

Query: 335 RGRLFGFGDNERAQLGH 351
             R++ FG   + QLG+
Sbjct: 294 TNRIYSFGCGMQGQLGN 310



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 95  RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 153
           R ++ L      Q+  G   +  L+  G +   G N HGQLG   +     +P+ +  L 
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 213
            +  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G   V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
            +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L      QV   +  
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286

Query: 274 TFVLVD-TGSVYGFGWMGFGSLG 295
           T VLV  T  +Y FG    G LG
Sbjct: 287 TLVLVALTNRIYSFGCGMQGQLG 309



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATLS 239

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVY 178
             G V T GS   GQLGH    D   P+ +A L     V Q+  G  + L +      +Y
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWG-SKVSQVTCGRHHTLVLVALTNRIY 298

Query: 179 SFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 225
           SFG G    LG+GEQ  +  P  +   T       + ++ AG++H  AL
Sbjct: 299 SFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           V++++ GD+H VAL + G ++ WG+   G LG   ++     P+ L SL      Q+ A 
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +FVL  +G V+G+G    G LG  D   +D+ + P I+ SL       IS G  HT 
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDRFV-PTIVKSLSGKKTVSISCGGEHTA 236

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLR 355
            ++  G +F FG     QLGH++L+
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLK 261



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 248 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
           +DK T+  PL  L +   +Q+    + +  L + G ++ +G    G LG   R     + 
Sbjct: 103 MDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGL--RKEQALIQ 160

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            P+ L SL    V+QIS G  H+ V++  G +FG+G N   QLG
Sbjct: 161 SPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 204


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 156/355 (43%), Gaps = 26/355 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + VV V+A  
Sbjct: 425 MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGR 481

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H+  V   G V+  GDN     G   +T+R  P+  P L   +       V AG N + 
Sbjct: 482 YHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VAAGENHSL 535

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y LAV  +G 
Sbjct: 536 VLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSLAVRSDGT 592

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G V+ WG 
Sbjct: 593 VWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDGTVWAWGS 650

Query: 237 GYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G    G LG
Sbjct: 651 NYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGGNTAGVLG 708

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G +D+   P     L       ++ G  H++V+   G  +  G N   Q+G
Sbjct: 709 ---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG 758



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+A E
Sbjct: 173 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVAAGE 229

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +  +
Sbjct: 230 KHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHSLAV 285

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 176
              G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  +G 
Sbjct: 286 RSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGT 341

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 235
           V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+ WG
Sbjct: 342 VWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWG 397

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G LG
Sbjct: 398 GNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEGQLG 455

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  T  
Sbjct: 456 ---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTET 510

Query: 356 GCLEPTEI 363
               P  +
Sbjct: 511 SRKAPVRV 518



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 25/372 (6%)

Query: 9   HTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           H+L ++   + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V
Sbjct: 330 HSLSLAVRFDGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAV 387

Query: 66  LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
              G V+  G N     G   T+ R +  P  V+ L GV    V A    +  +     V
Sbjct: 388 RSDGTVWAWGGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATV 443

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G N  GQLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G   
Sbjct: 444 WAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNE 500

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              +G G +     P  +          V V+AG+ H + L S G V+ WG  + G LG+
Sbjct: 501 YGQVGDGTETSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGN 556

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G   D  +P  +  L   +A  V A +  +  +   G+V+ +G    G LG  D   SD 
Sbjct: 557 GITSDSPVPVQVQGLSGGVA--VAAGQYYSLAVRSDGTVWAWGLNFEGQLG--DGTASDS 612

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGCLEPTEI 363
            +  R+     +  V+ ++ G  H +VV   G ++ +G N   Q+G     R  L P + 
Sbjct: 613 PVPVRVQVPGLSGGVA-VAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQ- 670

Query: 364 FIQEMEEDTGLA 375
            +Q + E   +A
Sbjct: 671 -VQGLSEGMAVA 681



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 531

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 532 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 587

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 588 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 646

Query: 179 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 647 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 702

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 703 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 758

Query: 298 DRGVSDKVLRP 308
           D G + +V  P
Sbjct: 759 DGGPTQQVSTP 769



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 23/366 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  V V+   
Sbjct: 223 VAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGGVAVAGGV 279

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V   G V+  G N     G     R +  P   + L GV  + V AG + +  + 
Sbjct: 280 YHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGHSLSLAVR 337

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVV 177
             G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LAV  +G V
Sbjct: 338 FDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 393

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G   + L    +Q        V+ V+A  EH +A+ S   V+ WG+ 
Sbjct: 394 WAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDATVWAWGRN 449

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   +G +G  
Sbjct: 450 YEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNEYGQVG-- 505

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G       P  + +L       ++ G  H++V+   G ++ +G N   QLG+      
Sbjct: 506 -DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDS 562

Query: 358 LEPTEI 363
             P ++
Sbjct: 563 PVPVQV 568



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 159/382 (41%), Gaps = 31/382 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 55
           + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A     V  V
Sbjct: 273 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQGLSGVEAV 326

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +A  + +  V   G V+  G NS    G+         P  V  L G     VT     +
Sbjct: 327 AAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GVTVVAASS 382

Query: 116 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
             L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   + LAV  
Sbjct: 383 HALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQEHSLAVRS 439

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +  V+++G      LG G       P  +         VV V+AG  H +A+   G V+ 
Sbjct: 440 DATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVRFDGTVWA 495

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +G   +G 
Sbjct: 496 WGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAWGGNHYGQ 553

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N   QLG  T
Sbjct: 554 LG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 608

Query: 354 LRGCLEPTEIFIQEMEEDTGLA 375
                 P  + +  +     +A
Sbjct: 609 ASDSPVPVRVQVPGLSGGVAVA 630



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 23/305 (7%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 75  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 131

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 132 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 187

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G V+++GS     LG G  +  L P  +    +K   VV V+AG++H +A+ S G V+T
Sbjct: 188 DGTVWAWGSNFEGQLGDGTTNVSLVPVRV----KKLTGVVAVAAGEKHSLAVRSDGTVWT 243

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 244 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 301

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 302 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 354

Query: 351 HDTLR 355
           +DT+ 
Sbjct: 355 NDTIE 359


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 150/341 (43%), Gaps = 23/341 (6%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQV-- 71
           S V++ G +  G LG+G  T       R+ F  A    + +V     H   +   G V  
Sbjct: 8   SLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLG 67

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 131
           F  G       G+ D++     P+ V  L G    ++ AGL  +  LT  G ++  G N 
Sbjct: 68  FGNGVKGQLGIGNTDSHS---NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNL 124

Query: 132 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
            GQLG  H  T    TP+ + PL     + Q+A G  +   +T +G ++ FG+  +  LG
Sbjct: 125 SGQLGLGHNFTAKEQTPQKVPPLGRA-KITQLACGQDHTAVLTSSGELFMFGNNRDGALG 183

Query: 190 ---HGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
              H  +   +   A Q     KG HVV++  G +H VAL ++G VY WG+   G LG G
Sbjct: 184 VAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTG 243

Query: 246 DEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           D  ++  P    +PLS+ K    + V    + T  + D   VYGFG    G LG   RGV
Sbjct: 244 DTQNRYTPSLVCKPLSAFK---CIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGV 300

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
              V  P  +  L    V     G +HT++ T  G  +  G
Sbjct: 301 IVPV--PTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 17/241 (7%)

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------LEEVGSVVQIAAGPSYMLAVTGN 174
           R  V   G N+ GQLG+G     PT  S  P      L     + ++  G  +  A+T +
Sbjct: 7   RSLVWAVGGNSKGQLGNGT----PTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G V  FG+G    LG G       P+ +     KG  VV+++AG EH +AL  SG +Y +
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKG--VVKMAAGLEHSLALTESGDLYAF 120

Query: 235 GKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G    G   LGH     +  P+ +  L      Q+   +  T VL  +G ++ FG    G
Sbjct: 121 GDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDG 180

Query: 293 SLGFP---DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
           +LG     + G       P+++  L+  HV QI  GL HTV +T  G ++ +G+N R QL
Sbjct: 181 ALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQL 240

Query: 350 G 350
           G
Sbjct: 241 G 241



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 17/291 (5%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTC 127
           V+  G NS    G+    +  F P  V A +  P +++     G   T  LT  G V   
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSDGDVLGF 68

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SN 185
           G+   GQLG G+T     P+ +  L   G VV++AAG  + LA+T +G +Y+FG      
Sbjct: 69  GNGVKGQLGIGNTDSHSNPQRVHLLSGKG-VVKMAAGLEHSLALTESGDLYAFGDNLSGQ 127

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 243
             LGH     E  P+ +    R    + +++ G +H   L SSG ++ +G    GALG  
Sbjct: 128 LGLGHNFTAKEQTPQKVPPLGRA--KITQLACGQDHTAVLTSSGELFMFGNNRDGALGVA 185

Query: 244 ----HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
                G  I  + P+ ++ LK    VQ+    + T  L   G VY +G  G G LG  D 
Sbjct: 186 GHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGD- 244

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
              ++     +   L A     ++ G  HT+ VTD   ++GFG +   QLG
Sbjct: 245 -TQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 8/242 (3%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-TTQCVSFTRINFPSAAHVVQVSAS 58
           +++  G  H+L ++ S  +++ G +L G LG G   T +  +  ++     A + Q++  
Sbjct: 99  VKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACG 158

Query: 59  ENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLN 113
           ++H A +  SG++F  G+N        GH +   PI    P+LV  LKG    Q+  GL 
Sbjct: 159 QDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQ 218

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T  LT  G V+  G N  GQLG GDT +R TP  +         + +A G  + +AVT 
Sbjct: 219 HTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTD 278

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
              VY FGS  +  LG G +   + P   +  R  G  V     G  H +    +G  Y 
Sbjct: 279 CDDVYGFGSDRHGQLGLG-RRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYI 337

Query: 234 WG 235
            G
Sbjct: 338 MG 339


>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
 gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 444

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 28/328 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V +++A   H   +   G V+  G N     G    N     P  V  L GV  K + AG
Sbjct: 73  VRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSA-GPVQVAGLTGV--KAIAAG 129

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            + +  L   G V   GSN++GQ+G G    + T   I  ++ + ++  I+AG S+ LA 
Sbjct: 130 KDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQ-VKGLNNIQAISAGGSHCLAS 188

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            G+G V+++G   +  LG G       P      R K  +V+ + AGD H +A+   G V
Sbjct: 189 QGDGAVWAWGDNRHGVLGDGTNESRFTP-----VRSKIYNVMGLDAGDAHALAVMVDGNV 243

Query: 232 YTWGKGYCGALGHGD-------------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           ++WG  Y G LG G              E D   P+ +  L    +V V A    +  L 
Sbjct: 244 WSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGA--SHSVALA 301

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           D G+V+ +G    G LG    G SD  +  R+      + ++ +  GLYHT+ + D G +
Sbjct: 302 DNGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSG---INGITAVDAGLYHTLALKDDGSV 358

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
           + +G N   Q+G+ +      P  + +Q
Sbjct: 359 WAWGSNAEGQVGNRSASAG-SPALVLMQ 385



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 139 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 198
           D ++  TP+ +    E+  V +IAAG  ++LA+ G+G V+++GS     LG G  +D   
Sbjct: 58  DGVEYATPQKV----EISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG 113

Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           P  +Q     G+    ++AG +  +AL   G V+ WG    G +G G    K    P+  
Sbjct: 114 P--VQVAGLTGVKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQV 169

Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
              +    + A           G+V+ +G    G LG    G ++    P      + ++
Sbjct: 170 KGLNNIQAISAGGSHCLASQGDGAVWAWGDNRHGVLG---DGTNESRFTPV---RSKIYN 223

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           V  +  G  H + V   G ++ +G N   QLG
Sbjct: 224 VMGLDAGDAHALAVMVDGNVWSWGYNYNGQLG 255


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 9/282 (3%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLA-EGSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 179
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
             ++++ +P+I++SL    + ++  G   ++ +T  G+L  F
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 12/284 (4%)

Query: 7   RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 66  LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGH 123
           + S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G 
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL 242
               LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G L
Sbjct: 541 DYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKL 596

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           GHGD      P+ + SL      +V    + +  L  TG +  F
Sbjct: 597 GHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           L V+ N  V+ +GS S+  L  G Q   L P+   +F        ++ AG      + S 
Sbjct: 369 LVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQ----QIEAGQYCTFVISSD 424

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYG 285
           G V   GKG  G LG GD  ++T  + L+   + +  ++ + K     T  L   G V+ 
Sbjct: 425 GSVRACGKGSYGRLGLGDSNNQTQLKKLN-FDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 286 FGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           +G   +G LG    G +     P+ IL  L    V  IS G  H+  VTD G+L+ +G+ 
Sbjct: 484 WGDGDYGKLG---HGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 345 ERAQLGH 351
           +  +LGH
Sbjct: 541 DYGRLGH 547


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 156/355 (43%), Gaps = 26/355 (7%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + VV V+A  
Sbjct: 400 MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGR 456

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTG 116
            H+  V   G V+  GDN     G   +T+R  P+  P L   +       V AG N + 
Sbjct: 457 YHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VAAGENHSL 510

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y LAV  +G 
Sbjct: 511 VLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSLAVRSDGT 567

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G V+ WG 
Sbjct: 568 VWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDGTVWAWGS 625

Query: 237 GYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G    G LG
Sbjct: 626 NYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGGNTAGVLG 683

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
               G +D+   P     L       ++ G  H++V+   G  +  G N   Q+G
Sbjct: 684 ---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG 733



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+A E
Sbjct: 148 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVAAGE 204

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +  +
Sbjct: 205 KHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHSLAV 260

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 176
              G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  +G 
Sbjct: 261 RSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGT 316

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 235
           V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+ WG
Sbjct: 317 VWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWG 372

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G LG
Sbjct: 373 GNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEGQLG 430

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
               G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  T  
Sbjct: 431 ---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTET 485

Query: 356 GCLEPTEI 363
               P  +
Sbjct: 486 SRKAPVRV 493



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 25/372 (6%)

Query: 9   HTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           H+L ++   + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V
Sbjct: 305 HSLSLAVRFDGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAV 362

Query: 66  LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
              G V+  G N     G   T+ R +  P  V+ L GV    V A    +  +     V
Sbjct: 363 RSDGTVWAWGGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATV 418

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              G N  GQLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G   
Sbjct: 419 WAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNE 475

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              +G G +     P  +          V V+AG+ H + L S G V+ WG  + G LG+
Sbjct: 476 YGQVGDGTETSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGN 531

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
           G   D  +P  +  L   +A  V A +  +  +   G+V+ +G    G LG  D   SD 
Sbjct: 532 GITSDSPVPVQVQGLSGGVA--VAAGQYYSLAVRSDGTVWAWGLNFEGQLG--DGTASDS 587

Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGCLEPTEI 363
            +  R+     +  V+ ++ G  H +VV   G ++ +G N   Q+G     R  L P + 
Sbjct: 588 PVPVRVQVPGLSGGVA-VAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQ- 645

Query: 364 FIQEMEEDTGLA 375
            +Q + E   +A
Sbjct: 646 -VQGLSEGMAVA 656



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 506

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 507 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 562

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 563 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 621

Query: 179 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 622 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 677

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 678 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 733

Query: 298 DRGVSDKVLRP 308
           D G + +V  P
Sbjct: 734 DGGPTQQVSTP 744



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 23/366 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  V V+   
Sbjct: 198 VAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGGVAVAGGV 254

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  V   G V+  G N     G     R +  P   + L GV  + V AG + +  + 
Sbjct: 255 YHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGHSLSLAVR 312

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVV 177
             G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LAV  +G V
Sbjct: 313 FDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 368

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G      LG G   + L    +Q        V+ V+A  EH +A+ S   V+ WG+ 
Sbjct: 369 WAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDATVWAWGRN 424

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
           Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   +G +G  
Sbjct: 425 YEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNEYGQVG-- 480

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
             G       P  + +L       ++ G  H++V+   G ++ +G N   QLG+      
Sbjct: 481 -DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDS 537

Query: 358 LEPTEI 363
             P ++
Sbjct: 538 PVPVQV 543



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 159/382 (41%), Gaps = 31/382 (8%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 55
           + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A     V  V
Sbjct: 248 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQGLSGVEAV 301

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           +A  + +  V   G V+  G NS    G+         P  V  L G     VT     +
Sbjct: 302 AAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GVTVVAASS 357

Query: 116 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
             L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   + LAV  
Sbjct: 358 HALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQEHSLAVRS 414

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +  V+++G      LG G       P  +         VV V+AG  H +A+   G V+ 
Sbjct: 415 DATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVRFDGTVWA 470

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +G   +G 
Sbjct: 471 WGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAWGGNHYGQ 528

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N   QLG  T
Sbjct: 529 LG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 583

Query: 354 LRGCLEPTEIFIQEMEEDTGLA 375
                 P  + +  +     +A
Sbjct: 584 ASDSPVPVRVQVPGLSGGVAVA 605



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 23/305 (7%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 50  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 106

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 107 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 162

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G V+++GS     LG G  +  L P  +    +K   VV V+AG++H +A+ S G V+T
Sbjct: 163 DGTVWAWGSNFEGQLGDGTTNVSLVPVRV----KKLTGVVAVAAGEKHSLAVRSDGTVWT 218

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 219 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 276

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 277 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 329

Query: 351 HDTLR 355
           +DT+ 
Sbjct: 330 NDTIE 334


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 15/287 (5%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
           G  HT+V+TD G+++ +G N   QLG         PT +    ME+D
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---TMEKD 308



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG  +
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 299 R 299
           +
Sbjct: 294 K 294


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASENHAAFVLQSGQVFTCG- 75
           VFS G++    LG+     Q V   +IN   S  +   ++  +     +   G++++CG 
Sbjct: 1   VFSWGNTRDAELGY--VANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGS 58

Query: 76  ------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
                 D  SF  GH +++       LVE L+     QV+A  +    +T++G V++ GS
Sbjct: 59  HTRPQNDVKSFL-GHAESSLA-----LVEGLESERFIQVSATSHVLA-VTLQGEVYSWGS 111

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           N++ QLG     +RP   +    EEV   VQ+ AG  +  AV+  G +Y++G G    LG
Sbjct: 112 NSYKQLGRDGVNNRPMKITALEGEEV---VQVCAGGHHSAAVSKAGNLYTWGRGGYGRLG 168

Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           HG   D   P  +  F  +GI VV V+ G  D H + +   G++Y++G G  G LGHG  
Sbjct: 169 HGTSDDVNVPTRVAAFP-EGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTN 227

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
             +  PE +        V+V      +  +  +G++Y +G      LG    G    + +
Sbjct: 228 DRRRQPERID----FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLG---TGTEAVIWQ 280

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
           PR   +L  H V   +    H V VTDRG +F +G N+  QLG D
Sbjct: 281 PRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGAD 325



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 123/308 (39%), Gaps = 64/308 (20%)

Query: 3   ITTGRYHTLLISNS-SVFSCGS------SLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 55
           I  G+  T +I     ++SCGS       +   LGH        S   +    +   +QV
Sbjct: 37  IALGQRGTFVIDGEGRLWSCGSHTRPQNDVKSFLGHAES-----SLALVEGLESERFIQV 91

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
           SA+ +  A  LQ G+V++ G NS    G    N    RP  + AL+G    QV AG + +
Sbjct: 92  SATSHVLAVTLQ-GEVYSWGSNSYKQLGRDGVNN---RPMKITALEGEEVVQVCAGGHHS 147

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTG 173
             ++  G+++T G   +G+LGHG + D   P  +A   E   VV +A G   ++ + VT 
Sbjct: 148 AAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTE 207

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQ------------------------------ 203
           +G +YSFG G    LGHG      QP  I                               
Sbjct: 208 DGHIYSFGDGDFGKLGHGTNDRRRQPERIDFDIVKVVCGSSTSAAISLSGALYVWGGGRR 267

Query: 204 ----------TFRRKGIH------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
                      ++ +  H      VV  +   EH VA+   G V+ WG    G LG    
Sbjct: 268 YRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAG 327

Query: 248 IDKTLPEP 255
            +KT+  P
Sbjct: 328 SEKTIIAP 335



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-- 57
           +Q+  G +H+  +S + ++++ G    G LGHG      V      FP    VV V+   
Sbjct: 138 VQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGL 197

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            + H+  V + G +++ GD      GH   +R     R+   +  V C     G + +  
Sbjct: 198 GDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERIDFDIVKVVC-----GSSTSAA 252

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +++ G ++  G     +LG G       P++   L     VV  A    + +AVT  G V
Sbjct: 253 ISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHAL-NTHKVVDCALSSEHGVAVTDRGEV 311

Query: 178 YSFGSGSNFCLG--HGEQHDELQPRAIQ 203
           + +G+  +  LG   G +   + PR I+
Sbjct: 312 FVWGANDHGQLGADAGSEKTIIAPRVIK 339



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 18/193 (9%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG- 235
           V+S+G+  +  LG+        P+      R  ++   ++ G      +D  G +++ G 
Sbjct: 1   VFSWGNTRDAELGYVANQPVESPQINTLLSR--LNPTHIALGQRGTFVIDGEGRLWSCGS 58

Query: 236 -----KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
                      LGH  E    L E    L+S   +QV A      V +  G VY +G   
Sbjct: 59  HTRPQNDVKSFLGHA-ESSLALVE---GLESERFIQVSATSHVLAVTLQ-GEVYSWGSNS 113

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +  LG    GV++   RP  + +L    V Q+  G +H+  V+  G L+ +G     +LG
Sbjct: 114 YKQLG--RDGVNN---RPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLG 168

Query: 351 HDTLRGCLEPTEI 363
           H T      PT +
Sbjct: 169 HGTSDDVNVPTRV 181


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD+     PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLNPVHIMVEK 283



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 6/252 (2%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D+   +  P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLV-PKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+++G  +   +G G   ++  PR +         VV ++ G    +A+  +G VY WG 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-KVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 297 PDRGVSDKVLRP 308
              G  + +L P
Sbjct: 267 --TGNKNNLLNP 276



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 113/275 (41%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF  G +    LG G   +  V   ++       +  +S  S  H     + G V+ 
Sbjct: 40  NDEVFVFGMNYSNCLGTGDSQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN+ I   ++   L      +V  G + +  L   G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++L P  +       + V ++  G  H +AL   G +Y WG    G LG G++ +   P
Sbjct: 219 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNP 276

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
             +   K  +  +  C     +      G VY +G
Sbjct: 277 VHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +   P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLNPVHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|261404982|ref|YP_003241223.1| S-layer domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261281445|gb|ACX63416.1| S-layer domain protein [Paenibacillus sp. Y412MC10]
          Length = 1074

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 30/398 (7%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS------FTRIN--FPSAAH 51
           + I++  YHTL L+ N +V S GS++ G LG+G + +   +      + ++N      A+
Sbjct: 39  VSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGSNFSTSFAQPVYEKVNGELKVLAN 98

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +V V AS  ++  +   G V+  G N+S   G R      + P  +      P +Q++AG
Sbjct: 99  IVAVEASLQYSLALSADGTVYGWGLNASNKLG-RPFEGTYYYPTAIPIAGLPPIEQISAG 157

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT-----LDRPTPKSIAPLEEVGSVVQIAAGPS 166
           +     L   G V   G N  G +G+G+      ++RP        E +  + QI AG  
Sbjct: 158 VTHAAALAKDGTVWAWGDNQSGAVGNGNNGPLEYVERPVQVKKNASEFLTGIKQIHAGNW 217

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + +AVT NG +  +G    + LG    +    P  A+   +     + +VS G+++ +AL
Sbjct: 218 FTMAVTENGELLGWGYNGTYQLGDLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLAL 277

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFVLV 278
              G + +WG    G LG  D +  T    P+P+    S  A    V + A       + 
Sbjct: 278 KEDGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAAIR 336

Query: 279 DTGSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVT 333
           + GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV++ 
Sbjct: 337 EDGSVWTWGGNTIWGSGDITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIML 396

Query: 334 DRGRLFGFGDNERAQLGHD-TLRGCLEPTEIFIQEMEE 370
           D G L+  G N   QLG    +   +EP ++ +   ++
Sbjct: 397 DNGTLWSMGSNREKQLGGGYKMDSAIEPNQLSLSHYDK 434



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 81  CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 136
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 21  TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 69

Query: 137 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           +G        +  +P  + +   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 70  NGKQGSNFSTSFAQPVYEKVNGELKVLANIVAVEASLQYSLALSADGTVYGWGLNASNKL 129

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-- 246
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G+  
Sbjct: 130 GRPFEGTYYYPTAIPIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGNNG 187

Query: 247 ---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
                    ++ K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG  
Sbjct: 188 PLEYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGTYQLG-- 240

Query: 298 DRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
           D   + +      LD  +   + + ++STG  +T+ + + G L  +G N   QLG DTL+
Sbjct: 241 DLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGSDTLQ 300

Query: 356 GC 357
           G 
Sbjct: 301 GT 302


>gi|291406745|ref|XP_002719686.1| PREDICTED: NIMA-related kinase 8-like [Oryctolagus cuniculus]
          Length = 978

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
              G  V +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 L--GNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 127/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 430 QVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPM---QLNFFLGNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGM-DKIAGPEVLEPMQLNFFLGNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +    G P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGMDKIAGPEVLEPMQLNFFLGNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   T+ VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 16/285 (5%)

Query: 90  PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           PIF    P  + ++K   C   ++G N    +T    V+  GSN    LG GD      P
Sbjct: 15  PIFSLLDPEFISSIKQA-CVFGSSG-NEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEP 72

Query: 147 KSIAPLEEVGSVVQIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
           + I  L +   +V I  G   ++L  T NG +YS+G      LG+G  +  L P+ I T 
Sbjct: 73  RKIDILCK-KKIVDIGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITT- 130

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLA 264
              G  VV+V+ G  H +AL   G V+ WG   CG +G G   ++  P  +++ L +   
Sbjct: 131 NLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKV 190

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQI 322
            ++   +  +  L+D G VYG+G+ G G LG     V + V +P    + +L+   V QI
Sbjct: 191 TEIACGQTSSMALLDNGEVYGWGYNGNGQLG-----VGNNVNQPNPCRVAALQQMIVVQI 245

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             G  H + +TD G ++ +G N   QLG       + PT+I + +
Sbjct: 246 VCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIALDK 290



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 29/299 (9%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +S N A  + Q   V+  G N S C G  D    +  PR ++ L    CK+    + +  
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGL-EPRKIDIL----CKKKIVDIGYGS 90

Query: 117 -----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
                  T  G +++ G N + QLG+G T    +P+ I        VV++A G  + LA+
Sbjct: 91  GPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 229
           T  G V+++G  +   +G G   ++  PR +      RK   V  ++ G    +AL  +G
Sbjct: 151 TLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRK---VTEIACGQTSSMALLDNG 207

Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
            VY WG    G LG G+ +++  P  +++L+  + VQ+         L D GSVY +G  
Sbjct: 208 EVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGAN 267

Query: 290 GFGSLGFPDRGVSDKVLRPRI-LDSLR-----AHHVSQISTGLYHTVVVTDRGRLFGFG 342
            +G LG  ++  ++ V   +I LD  R     A H + +S+       +T  G+++ +G
Sbjct: 268 SYGQLGTGNK--ANLVTPTKIALDKGRFVEIGATHYNHVSSA------ITQTGKVYMWG 318



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 7/287 (2%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           ++G    ++  +  V++ GS+    LG G +    +   +I+      +V +   S  H 
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVG-DAQSGLEPRKIDILCKKKIVDIGYGSGPHV 94

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
                +G +++ G N     G+  TN+ +    +   L G    +V  G + +  LT+ G
Sbjct: 95  LVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEG 154

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++ TP+ +A       V +IA G +  +A+  NG VY +G 
Sbjct: 155 EVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGY 214

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++  P  +   ++  + VV++  G  H +AL   G VY WG    G L
Sbjct: 215 NGNGQLGVGNNVNQPNPCRVAALQQ--MIVVQIVCGYAHAMALTDEGSVYAWGANSYGQL 272

Query: 243 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 287
           G G++ +   P  ++  K    V++ A      +  +  TG VY +G
Sbjct: 273 GTGNKANLVTPTKIALDKGRF-VEIGATHYNHVSSAITQTGKVYMWG 318


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 8/284 (2%)

Query: 87  TNRPIFRPRLVEALKGVPCKQVT-AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 145
           T  PIF    +E L  +    V  +  N   ++T    V   G N    LG GD+     
Sbjct: 5   TKWPIFSLMGLEELSMIRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV 64

Query: 146 PKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           PK +  L     V +   +GP  ++A T +G ++++G      LG+G  +  + P  +  
Sbjct: 65  PKKLDFLNGRKIVSLSYGSGPHVLMA-TEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSA 123

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHL 263
                  VV V+ G  H +AL  SG VY WG   CG +G G   ++  P  +SS L++ +
Sbjct: 124 -NMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV 182

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
           AV +   +  +  +VD G VYG+G+ G G LG  + G     L P  L +L+   V QI 
Sbjct: 183 AVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNG---NQLTPCRLVALQGLCVLQIV 239

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            G  H + ++D G L+ +G N   QLG       L P +I  ++
Sbjct: 240 CGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEK 283



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 7/276 (2%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           +  VF  G +    LG G   +  V   +++F +   +V +S  S  H     + G++F 
Sbjct: 40  DDEVFVLGLNCSNCLGTGDSQSTIVP-KKLDFLNGRKIVSLSYGSGPHVLMATEDGELFA 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
            G N     G+  TN+ +  P LV A +      +V  G + +  LT  G V+  G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
             ++L P  +     +G+ V+++  G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTPCRLVAL--QGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLS 275

Query: 253 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           P  + S K  +  V  C     +     +G VY +G
Sbjct: 276 PVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 7/288 (2%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
           +S N A +V    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV-PKKLDFLNGRKIVSLSYGSGPHV 87

Query: 117 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
            + T  G +   G N + QLG+G T     P  ++       VV++A G  + +A+T +G
Sbjct: 88  LMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSG 147

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVGIVCGQTSSLAVVDNGEVYGWG 206

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G+  ++  P  L +L+    +Q+         L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG 266

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 342
               G     L P  + S +   V   +    HT    T  G+++ +G
Sbjct: 267 ---TGNKSNQLSPVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%)

Query: 108  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGP 165
            V+ G N    LT  GHV+T G N  G+LGHGD    P   PK +   +    V ++  G 
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKS-KCVKEVVCGG 938

Query: 166  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
             + LA T +G VY +G+G    LG G++     P  I+T R+  +HV +++AG  H + +
Sbjct: 939  EHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK--MHVTQLAAGYAHTIVV 996

Query: 226  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
              SG V  +G G  G LG G   D  +P  L ++ S   VQ       T +L + G VY 
Sbjct: 997  LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEAGEVYT 1054

Query: 286  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
             G    G LG  D   +D+ L P++++ L    +  I+ G +HT+ +TD   ++ +G
Sbjct: 1055 CGSAMSGQLGHADNLQNDR-LAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG 1110



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 32   GPETTQ---CVSFTRINFP-----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 83
            GPE+ Q     S  ++N P     S   VV VS   NH A + ++G V+T G N S   G
Sbjct: 849  GPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELG 908

Query: 84   HRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
            H D +  P   P+ V   K    K+V  G   T   T  G V+  G+   GQLG GD   
Sbjct: 909  HGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 143  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 202
               P  I  L ++  V Q+AAG ++ + V  +G V  FG G    LG G + D L P  +
Sbjct: 969  HWLPVPIKTLRKM-HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027

Query: 203  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSLK 260
            Q        +V+ + G  H   L  +G VYT G    G LGH D +  D+  P+ +  L 
Sbjct: 1028 QAMP----SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN 1083

Query: 261  SHLAVQVCARKRKTFVLVDTGSVYGFGWM----GFGSLGFPDRGVSDKVLRPRILDSLRA 316
                  +      T  + D  +VY +G +      G++    +    K + P I+  L  
Sbjct: 1084 GKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMG 1143

Query: 317  HHVSQISTGLYHTVVVTDRGRLF 339
              +S +S G  H+V  T  G ++
Sbjct: 1144 KRISLVSCGHAHSVATTMDGEVY 1166



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 158  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 215
            VV ++ G ++  A+T NG VY++G   +  LGHG++    +L P+ +  F+ K +    V
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVK--EV 934

Query: 216  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
              G EH +A   SG VY WG G  G LG GD     LP P+ +L+     Q+ A    T 
Sbjct: 935  VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTI 994

Query: 276  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            V++ +G V  FG    G LG    G+   +L P  L ++ +  + Q + G  HT ++T+ 
Sbjct: 995  VVLKSGEVMVFGGGEVGQLG---TGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEA 1049

Query: 336  GRLFGFGDNERAQLGH 351
            G ++  G     QLGH
Sbjct: 1050 GEVYTCGSAMSGQLGH 1065



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 5/155 (3%)

Query: 211  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVC 268
             VV VS G  H  AL  +G+VYTWG+   G LGHGD+  + +  P+ +   KS    +V 
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVV 935

Query: 269  ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
                 T    ++GSVYG+G    G LG  DR +      P  + +LR  HV+Q++ G  H
Sbjct: 936  CGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLH---WLPVPIKTLRKMHVTQLAAGYAH 992

Query: 329  TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            T+VV   G +  FG  E  QLG    +  L PT++
Sbjct: 993  TIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 139/336 (41%), Gaps = 42/336 (12%)

Query: 2    QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
            ++  G  HTL  + S SV+  G+   G LG G  T   +    I      HV Q++A   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-IKTLRKMHVTQLAAGYA 991

Query: 61   HAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
            H   VL+SG+V  F  G+      G R   + +  P  ++A+  +   Q   G   T  L
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMR---KDLLVPTKLQAMPSI--VQAACGYCHTALL 1046

Query: 119  TIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 175
            T  G V+TCGS   GQLGH D L  DR  PK +  L   G  ++ IA G  + +A+T   
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN--GKRIRFIACGSFHTIAITDLD 1104

Query: 176  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR---------VSAGDEHVVALD 226
             VY++G       G        Q R     +R    +V+         VS G  H VA  
Sbjct: 1105 NVYTWGG----VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATT 1160

Query: 227  SSGYVYTW-------------GKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARK 271
              G VY W             G G   A G  +   +   +P+   +    +     A +
Sbjct: 1161 MDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGE 1220

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
              T V+ + G +Y +G   FG LG  D+G   ++++
Sbjct: 1221 EFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQ 1256



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 38/248 (15%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAA 50
            +Q   G  HT L++ +  V++CGS++ G LGH          P+  + ++  RI F    
Sbjct: 1034 VQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF---- 1089

Query: 51   HVVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFR---PRLVEALKGVP 104
                ++    H   +     V+T G      S     ++    I +   P +V+ L G  
Sbjct: 1090 ----IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145

Query: 105  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPL--------E 153
               V+ G   +   T+ G V+   S    Q   L  G  L   +  + APL        +
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205

Query: 154  EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            +  S   V   AAG  + L VT NG++YS+GSG+   LG G+Q D  +   +        
Sbjct: 1206 DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRR 1265

Query: 211  HVVRVSAG 218
              VR++ G
Sbjct: 1266 RSVRLTYG 1273


>gi|351712501|gb|EHB15420.1| Serine/threonine-protein kinase Nek9 [Heterocephalus glaber]
          Length = 712

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G    QV AG+     +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 283 PQKLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 342

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 343 HVEKLQG-KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQLNFF 401

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 402 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRVDVPKALIIV 459

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRILDS------LRAH 317
            V      TF+L  +G V   G   F  LG      G+ +      +  S      L  +
Sbjct: 460 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSFY 519

Query: 318 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 520 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 552



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 32/302 (10%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ +++   +++ GS   G +G      ++ +   ++NF  +  V QVS  +
Sbjct: 354 QVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQLNFFLSNPVEQVSCGD 413

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 414 NHVVVLTRNKEVYSWG------CGEHGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGSDG 467

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
           T  LT  G V  CG N   +LG          H    + PT  ++A       +  IA G
Sbjct: 468 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSFYKIRTIAPG 527

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  +A
Sbjct: 528 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 586

Query: 225 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
                +++ WG G  G L        HG +I  + P P+     H+    C R   T ++
Sbjct: 587 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 645

Query: 278 VD 279
           V+
Sbjct: 646 VE 647



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 20/330 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  E+    V   GQ++  G +   C
Sbjct: 323 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGC 381

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G  +     +  P  +      P +QV+ G N    LT    V++ G   HG+LG    
Sbjct: 382 IGVDKIAGSEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSE 441

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLGHGEQHD 195
            D  TP+ +  P   +   VQ  +  +++L  +G  +          G N C+     H+
Sbjct: 442 EDYYTPQRVDVPKALIIVAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 501

Query: 196 ELQ--PRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                P +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +  
Sbjct: 502 AYHEVPTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 561

Query: 253 PEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKV 305
              L   L     ++V      T    D   ++ +G  G G L            +    
Sbjct: 562 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW 621

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 622 PRP-IFGSL--HHVPDLSCRGWHTILIVEK 648



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG  H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 290 KSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 349

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV   +  T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 350 KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGSEVLEPMQLNFFLSNPVEQ 408

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +S G  H VV+T    ++ +G  E  +LG D+      P  +
Sbjct: 409 VSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRV 450



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 241 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 284

Query: 255 PLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 311
            L  +KS  +  QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 285 KLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 344

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 345 EKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQL 398


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
           PS +    + A +     +   G V  CG  S    G  D+N      +L      ++K 
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
           V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
           AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573

Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
           +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633

Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
            VY +G    +G GS            LRP++++ L A  +  +S G  H + ++    +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 339 FGFGDNERAQLGH 351
           + +G+N   Q G 
Sbjct: 687 YAWGNNSMGQCGQ 699



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 9   HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL  +    VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 131/295 (44%), Gaps = 20/295 (6%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +   G+VFT G  SS   GH D    I  P+LV         Q  AG + +GF++ 
Sbjct: 59  HVIALTSGGKVFTWGRGSSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G + TCG+ + GQLGHGDTL   TP  ++      SV  +A G  + L +     V  F
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGF 176

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSG    LG      +           K + VVR+SA  +H  A+ + G  ++WG+G+CG
Sbjct: 177 GSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG 236

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PDR 299
             G      ++LP PLS        +V        +L   G V+  G     +L   P++
Sbjct: 237 --GPDVHAPQSLPSPLS------FREVAVGWNHALLLTVDGEVFKLG----STLNKQPEK 284

Query: 300 GV----SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
                 S + L  ++ D      V QI+ G  H+  VT+ G +  +G  E  QLG
Sbjct: 285 QQLQIDSSEALFEKVPD-FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+S+G+G++  LG  +  DEL P+ +       I ++  + G  HV+AL S G V+TWG+
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSGGKVFTWGR 74

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGHGD ++ TLP+ +S     +  Q  A    +  + D+G ++  G   FG LG 
Sbjct: 75  GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            D   +  +  P  +       V  ++ G+ H++V+    ++ GFG  +R QLG  + R
Sbjct: 135 GD---TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 123/301 (40%), Gaps = 54/301 (17%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
           G +   L S   VF+ G    G LGHG +         ++F   + + Q +A  +H+ FV
Sbjct: 57  GAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFV 115

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             SG +FTCG+ S    GH DT   +  P  V        K V  G+  +  L     V 
Sbjct: 116 SDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVC 174

Query: 126 TCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
             GS   GQLG      +    P  ++ L++V  VV+I+A   +  A++ +G  +S+G G
Sbjct: 175 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFSWGRG 233

Query: 184 SNFC------------------------------------------LGHGEQHDELQPRA 201
             FC                                          L    +  +LQ  +
Sbjct: 234 --FCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDS 291

Query: 202 IQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
            +    K     G+ V++++AG EH  A+  +G V TWG G  G LG G+  D+T PE +
Sbjct: 292 SEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELV 351

Query: 257 S 257
           S
Sbjct: 352 S 352


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 140/301 (46%), Gaps = 22/301 (7%)

Query: 60  NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNF 114
            +  FV+ S G V  CG  S    G  D+N      +L      A+K V   + + G   
Sbjct: 422 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDG--H 479

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+ +
Sbjct: 480 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 539

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYT 233
           G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V++
Sbjct: 540 GELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWS 595

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---WMG 290
           +G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    +G
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 655

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q G
Sbjct: 656 CGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708

Query: 351 H 351
            
Sbjct: 709 Q 709



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 67  QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 593

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 653 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708

Query: 244 HGD 246
            G+
Sbjct: 709 QGN 711



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY +GS S+  L  G Q   LQP+   TF         + AG      + S G V   GK
Sbjct: 384 VYVWGSNSSHQLVEGTQEKILQPKLAATF----ADAQTIEAGQYCTFVISSDGSVRACGK 439

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
           G  G LG GD  +++  + L + + H A++  +  +     T      G V+ +G   +G
Sbjct: 440 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 498

Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 499 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 555



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 639 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 696

Query: 72  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 697 YAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 130/275 (47%), Gaps = 9/275 (3%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           VF  GD      G   +   +F PRLV+ LK      + AG   T  +T  G ++  GSN
Sbjct: 4   VFGRGDMGQLGDG---STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
              QLG     D   P  +  LE+   V ++A GP++ LAV   G V +FGS     +G 
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQF-QVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 191 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
           G     ++ PR ++  R   +H+VRV+AG  H +AL S+G V++ G G  GALG G    
Sbjct: 120 GPCGARVELPRVVKDLRS--MHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 250 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLR 307
             +P P+S L     VQ+   +  +  +   G V  +G G            G  +    
Sbjct: 178 NDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCST 237

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           P+ + +L+     Q+S G  HTV++T+ G ++ +G
Sbjct: 238 PKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 10/242 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV ++A   H A V   G+++  G N     G R  +  +  P  V AL+    ++V  G
Sbjct: 35  VVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDAL-APTRVTALEQFQVQRVACG 93

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 170
              T  +   G V   GS  +GQ+G G    R   P+ +  L  +  +V++AAG S+ LA
Sbjct: 94  PAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSM-HIVRVAAGGSHTLA 152

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           ++  G V+S G+GS   LG G       PR I      G  VV+++ G+ H  A+ + G 
Sbjct: 153 LSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLG--VVQIACGENHSAAITADGR 210

Query: 231 VYTWGKGYCGAL-----GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
           V TWG+G    L     GHGD  + + P+P+ +LK  +  QV      T +L + GSVY 
Sbjct: 211 VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYA 270

Query: 286 FG 287
           +G
Sbjct: 271 WG 272



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 4/187 (2%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V+ FG G    LG G   D   PR ++  + +   VV ++AG  H  A+ S G +Y  G 
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSR--DVVNLAAGALHTAAVTSDGELYVMGS 59

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
                LG     D   P  +++L+     +V      T  +VD G+V  FG   +G +G 
Sbjct: 60  NEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
              G   +V  PR++  LR+ H+ +++ G  HT+ ++  G +F  G+     LG  T  G
Sbjct: 120 GPCGA--RVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 357 CLEPTEI 363
              P  I
Sbjct: 178 NDVPRPI 184



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 12/188 (6%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G  HTL ++   +V + GS+  G +G GP   +      +    + H+V+V+A  +
Sbjct: 89  RVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGS 148

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H   +  +G VF+CG N SF    R T      PR +  L  +   Q+  G N +  +T 
Sbjct: 149 HTLALSSTGGVFSCG-NGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITA 207

Query: 121 RGHVHTCGSNTHGQL-----GHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTG 173
            G V T G   H  L     GHGD  +  TPK   P++ +  +V  Q++ G  + + +T 
Sbjct: 208 DGRVLTWGRGKHRLLPAFHCGHGDFENCSTPK---PVQALKGIVGRQVSCGDDHTVLLTE 264

Query: 174 NGVVYSFG 181
           +G VY++G
Sbjct: 265 DGSVYAWG 272


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  +   +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +G++V++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVP 276

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
             +++ K  ++ V  C     +     +G V  +G
Sbjct: 277 TLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 10/265 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVT-AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           P+F     E LK +    V  +  N   ++T+   V   G+N  G LG GD      P+ 
Sbjct: 8   PVFALLPPEELKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRR 67

Query: 149 IAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           I  L  +++ S+     GP   +A T +G V+S+G      LG+G     L P  + T  
Sbjct: 68  IDVLCGKKIVSL-SYGTGPHVAIA-TADGEVFSWGHNGYSQLGNGTSTHGLTPALVST-N 124

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 265
             G  V+ V+ G  H +AL + G V+ WG    G +G G   ++  P  +SS L++ + V
Sbjct: 125 LLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVV 184

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +  +  ++D+G +YG+G+   G LG  + G      R   + +L+  +V Q++ G
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCR---IAALQGVNVIQVACG 241

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLG 350
             HT+ +TD G ++ +G N   QLG
Sbjct: 242 YAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 115
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G     
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYGTGPHV 87

Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 175
              T  G V + G N + QLG+G +    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 5   TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           TG +  +  ++  VFS G +    LG+G  T                V++V+   +H   
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 65  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  +   G 
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVLDSGE 201

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           ++  G N +GQLG G+  ++ TP  IA L+ V +V+Q+A G ++ +A+T  G VYS+G+ 
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVIQVACGYAHTIALTDEGFVYSWGAN 260

Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           S   LG G + ++  P  I T + +   V           A   SG V  WG+
Sbjct: 261 SYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTS-AAKTQSGQVLMWGQ 312


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 90  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 148

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 208

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 209 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 268

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 269 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 326

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 327 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 58  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 117

Query: 149 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 118 LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 175

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 266
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 176 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 235

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 236 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 292

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 293 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 333



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 82  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 139

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 140 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 199

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 200 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 258

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 259 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 316


>gi|330837741|ref|YP_004412382.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749644|gb|AEC03000.1| hypothetical protein Spico_1802 [Sphaerochaeta coccoides DSM 17374]
          Length = 733

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 25/364 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLG------HGPETTQCVSFTRINFPS-AAHVVQ 54
           ++ G YHT+++ ++ +++  G +  G LG       G E T    +   N      +V  
Sbjct: 363 VSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNGSRFMTNVAA 422

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVT 109
           VSA  ++   + + G ++  G N     G   T   I  P  V+A           K V+
Sbjct: 423 VSAGWDYTMILKKDGTLWGTGHNYYGQLGIGGTTD-ISTPEQVKASTADNDFMTNVKAVS 481

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYM 168
           AG   T  L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  + 
Sbjct: 482 AGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGELHT 538

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALD 226
           + +  NG +++ G  ++  LG G   D   P  ++     G+   V  VSAG +H + L 
Sbjct: 539 MILKKNGTLWATGYNASGQLGIGGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKHTMILK 598

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           + G ++  G    G LG G+   K  P P+SS+ + +A  V A +  T +L   G+++  
Sbjct: 599 TDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAA-VFAGEEYTMILKKDGTLWAT 657

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   FG LG  D    D    P  + S+    V  +S G  HT+++   G L+  GDNE 
Sbjct: 658 GSNQFGRLGVGDYADKDT---PVPVSSM-GSDVKDVSAGYGHTMILKKDGTLWATGDNEY 713

Query: 347 AQLG 350
            QLG
Sbjct: 714 GQLG 717



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEE----VGS 157
            + V+AG   T  L   G +   G N +G+LG    GD  +  TP  +         + +
Sbjct: 360 VRSVSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNGSRFMTN 419

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG---IHV 212
           V  ++AG  Y + +  +G ++  G+G N+   LG G   D   P  ++          +V
Sbjct: 420 VAAVSAGWDYTMILKKDGTLW--GTGHNYYGQLGIGGTTDISTPEQVKASTADNDFMTNV 477

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
             VSAG EH + L   G ++  G    G LG G+   K  P P+SS+ + +A  V A + 
Sbjct: 478 KAVSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAA-VFAGEL 536

Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH----HVSQISTGLYH 328
            T +L   G+++  G+   G LG    G +  +  P  +  L        V+ +S G  H
Sbjct: 537 HTMILKKNGTLWATGYNASGQLGI---GGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKH 593

Query: 329 TVVVTDRGRLFGFGDNERAQLG 350
           T+++   G L+  GDN+  QLG
Sbjct: 594 TMILKTDGTLWATGDNQHGQLG 615



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 60
           ++ G+ HT+++  + ++++ G +  G LG G    +    T +   S  + V  V A E 
Sbjct: 480 VSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKD---TPVPVSSMGNQVAAVFAGEL 536

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTG 116
           H   + ++G ++  G N+S   G   T   I  P  V+ L G         V+AG   T 
Sbjct: 537 HTMILKKNGTLWATGYNASGQLGIGGTTD-ISTPEQVKGLGGAGVMTDVAAVSAGWKHTM 595

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNG 175
            L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  Y + +  +G
Sbjct: 596 ILKTDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGEEYTMILKKDG 652

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            +++ GS     LG G+  D+  P  + +    G  V  VSAG  H + L   G ++  G
Sbjct: 653 TLWATGSNQFGRLGVGDYADKDTPVPVSSM---GSDVKDVSAGYGHTMILKKDGTLWATG 709

Query: 236 KGYCGALGHGD-EIDKTLPEPL 256
               G LG G   I+   P P+
Sbjct: 710 DNEYGQLGDGSTNINSNTPVPV 731


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 31/367 (8%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           +Y   L ++ +V++ G +  G LG G  T++ +   R++  S  +VV +++   H   + 
Sbjct: 110 QYSLALDADGAVWAWGDNASGQLGDGTLTSRLLP-QRVSALS--NVVSLASGFAHVLALR 166

Query: 67  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
             G V+  GDN +   G     R    P  V  L GV    V AG + +  L   G +  
Sbjct: 167 ADGTVWAWGDNRNNQLGDGTLTRSSV-PLQVPGLSGVVA--VVAGGSSSLALRADGTLWA 223

Query: 127 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            G N +GQLG G T+ R TP  +A L+ V   V ++ G  + LA+  +G V+++G  +  
Sbjct: 224 WGDNRYGQLGDGTTVRRITPVQVASLDSV---VSVSVGAYHALALRADGTVWAWGHNAYG 280

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LG G      QP ++         V  + AG+ H +A+ + G V+ WG      LG G+
Sbjct: 281 QLGDGTNTQRTQPVSVSL-----TDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGN 335

Query: 247 EIDKTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
                LP     L++ +   V + A  R +  L   G+ + +G   FG LG       D 
Sbjct: 336 LTSSPLP-----LQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLG-------DT 383

Query: 305 VLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
              PR+     S  A   +  ++G  HTV++   GRL+ +GDN++ QLG+ T +    P 
Sbjct: 384 TFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPL 443

Query: 362 EIFIQEM 368
            + + ++
Sbjct: 444 PVNLTDV 450



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 30/359 (8%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFV 65
           R+   L ++ + +S G ++ G LG   +TT       +     A      ++ + H   +
Sbjct: 358 RHSVALGADGTAWSWGDNVFGQLG---DTTFEPRMAPVQVSGLALGRADATSGQLHTVML 414

Query: 66  LQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
             +G+++  GDN     G+   +D++ P+    L + +       V +G   T  L   G
Sbjct: 415 GANGRLWAWGDNQQGQLGNGTQQDSSLPL-PVNLTDVIS------VASGYRHTAALRSDG 467

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V T G N  GQLG G   DRPTP  +  L   G V  IA G ++ LA+  NG V+++G 
Sbjct: 468 TVWTWGMNRFGQLGEGTVTDRPTPVQVVGL---GGVTAIATGDNHSLALRSNGTVWAWGF 524

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                LG G   D  QP      +  G+ ++V ++AG  H +AL S G V+ +G  + G 
Sbjct: 525 NRYGQLGDGTAVDRRQP-----VQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQ 579

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG+G      +P     L S   V + A    +  L   G+V+ +G+   G LG    G 
Sbjct: 580 LGNGTRTWTLVPVQAVGLSS--VVSLAAGSLYSLALRADGTVWAWGYNASGQLGV---GT 634

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           +    +P  +  L    ++ I+ G YH++ +   G ++ +G N   QLG+ T    L P
Sbjct: 635 TQGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSP 691



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV---VQVSAS 58
           +  G YH+L + ++ +V++ G +    LG G       + T    P  A +   V + A 
Sbjct: 304 LVAGNYHSLAVRTDGAVWAWGDNRYRQLGTG-------NLTSSPLPLQAGMTGGVTLVAG 356

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
             H+  +   G  ++ GDN     G   T  P   P  V  L  +     T+G   T  L
Sbjct: 357 YRHSVALGADGTAWSWGDNVFGQLGDT-TFEPRMAPVQVSGLA-LGRADATSGQLHTVML 414

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G +   G N  GQLG+G   D   P  +     +  V+ +A+G  +  A+  +G V+
Sbjct: 415 GANGRLWAWGDNQQGQLGNGTQQDSSLPLPV----NLTDVISVASGYRHTAALRSDGTVW 470

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LG G   D  +P  +Q     G  V  ++ GD H +AL S+G V+ WG   
Sbjct: 471 TWGMNRFGQLGEGTVTD--RPTPVQVVGLGG--VTAIATGDNHSLALRSNGTVWAWGFNR 526

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G  +D+  P   S L + +A  + A    +  L   G+V+ FG+   G LG   
Sbjct: 527 YGQLGDGTAVDRRQPVQASGLSNIVA--IAAGGSHSLALRSDGTVWAFGYNFDGQLG--- 581

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
            G     L P  + ++    V  ++ G  +++ +   G ++ +G N   QLG  T +G  
Sbjct: 582 NGTRTWTLVP--VQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSA 639

Query: 359 EPTEI 363
           +P ++
Sbjct: 640 QPLQV 644



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 148/344 (43%), Gaps = 63/344 (18%)

Query: 4   TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 62
           T+G+ HT+++ +N  +++ G +  G LG+G +    +    +N      V+ V++   H 
Sbjct: 405 TSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP-VNL---TDVISVASGYRHT 460

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           A +   G V+T G N     G    T+RP   P  V  L GV    +  G N +  L   
Sbjct: 461 AALRSDGTVWTWGMNRFGQLGEGTVTDRPT--PVQVVGLGGVTA--IATGDNHSLALRSN 516

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTP----------------------------------- 146
           G V   G N +GQLG G  +DR  P                                   
Sbjct: 517 GTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNF 576

Query: 147 ----------KSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
                      ++ P++ VG  SVV +AAG  Y LA+  +G V+++G  ++  LG G   
Sbjct: 577 DGQLGNGTRTWTLVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQ 636

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
              QP  +Q     GI    ++AG  H +AL S G+V+ WG  + G LG+G    +  P 
Sbjct: 637 GSAQP--LQVPGLSGI--TSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG 692

Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            ++ + +  AV + A  + +  +   G+V+ +G    G LG  D
Sbjct: 693 LVAGMSN--AVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGD 734



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 14/252 (5%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I TG  H+L L SN +V++ G +  G LG G   T       +     +++V ++A  +H
Sbjct: 503 IATGDNHSLALRSNGTVWAWGFNRYGQLGDG---TAVDRRQPVQASGLSNIVAIAAGGSH 559

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +   G V+  G N     G+  T      P  V+A+       + AG  ++  L   
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGN-GTRTWTLVP--VQAVGLSSVVSLAAGSLYSLALRAD 616

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N  GQLG G T     P  +  L  + S   IAAG  + LA+  +G V+++G
Sbjct: 617 GTVWAWGYNASGQLGVGTTQGSAQPLQVPGLSGITS---IAAGSYHSLALRSDGWVWAWG 673

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
                 LG+G     L P  +        + V + AGD+H +A+ + G V+ WG    G 
Sbjct: 674 FNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGLNIKGQ 729

Query: 242 LGHGDEIDKTLP 253
           LG GD  +   P
Sbjct: 730 LGTGDTTEAWFP 741



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           V++A G  + LAV  +G V+++G      LG G   D+  P  +         V  V+AG
Sbjct: 53  VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL----TQVTSVAAG 108

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
           D++ +ALD+ G V+ WG    G LG G    + LP+ +S+L +   V + +       L 
Sbjct: 109 DQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALR 166

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             G+V+ +G      LG    G   +   P  +  L    V  +  G   ++ +   G L
Sbjct: 167 ADGTVWAWGDNRNNQLG---DGTLTRSSVPLQVPGLSG--VVAVVAGGSSSLALRADGTL 221

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEI 363
           + +GDN   QLG  T    + P ++
Sbjct: 222 WAWGDNRYGQLGDGTTVRRITPVQV 246



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 6/142 (4%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           Y   L ++ +V++ G +  G LG G  TTQ  S   +  P  + +  ++A   H+  +  
Sbjct: 609 YSLALRADGTVWAWGYNASGQLGVG--TTQG-SAQPLQVPGLSGITSIAAGSYHSLALRS 665

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G V+  G N     G+  T+ P   P LV  +       + AG   +  +   G V   
Sbjct: 666 DGWVWAWGFNFEGQLGN-GTSTPRLSPGLVAGMSNAVA--IIAGDQHSLAMKADGTVWAW 722

Query: 128 GSNTHGQLGHGDTLDRPTPKSI 149
           G N  GQLG GDT +   P  +
Sbjct: 723 GLNIKGQLGTGDTTEAWFPVQV 744


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 148
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 37  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 96

Query: 149 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 207
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 97  LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 154

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 266
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 155 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 214

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 215 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 271

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 272 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 22/317 (6%)

Query: 47  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 106
           PS   +   S  EN    V ++ +V+  G NSS       +   I +P+L  A      +
Sbjct: 356 PSPVPIDDSSTGEN-GNMVTENSEVYVWGSNSSHQLAE-GSQEKILQPKLSPAFANA--Q 411

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
            + AG   T  +   G V  CG  ++G+LG GD+ ++ T K +   +    + +I++   
Sbjct: 412 TIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLN-FDHRYVIRKISSSKG 470

Query: 167 ---YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
              + LA+T +G V+S+G G    LGHG    +  P+ IQ    +G  V  +SAG  H  
Sbjct: 471 SDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQG-ALQGKVVKSISAGYRHSA 529

Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKT 274
           A+   G ++TWG+G  G LGHGD   K           P+ + +L      +VC   + +
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L  TG ++ +G       G P+       LRP++++ L    +  ++ G  H + +T 
Sbjct: 590 LALTSTGQLFAWGCGACLGCGSPE----STALRPKLVEELANTRIVDVACGDSHCLALTH 645

Query: 335 RGRLFGFGDNERAQLGH 351
              ++ +G+N   Q G 
Sbjct: 646 DNEVYAWGNNAMGQCGQ 662



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 25/344 (7%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           +TG    ++  NS V+  GS+    L  G +  + +   +++ P+ A+   + A +    
Sbjct: 365 STGENGNMVTENSEVYVWGSNSSHQLAEGSQ--EKILQPKLS-PAFANAQTIEAGQYCTF 421

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTI 120
            V   G V  CG  S    G  D+N      +L    + V  +++++     G    LT 
Sbjct: 422 VVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYV-IRKISSSKGSDGHTLALTA 480

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V + G   +G+LGHG++  +  PK I    +   V  I+AG  +  AVT +G ++++
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 181 GSG---------SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           G G         SN  LGHG+ +   +P+ I+     G+++ +V  G +  +AL S+G +
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCCGSQSSLALTSTGQL 598

Query: 232 YTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           + WG G C  LG G      L P+ +  L +   V V         L     VY +G   
Sbjct: 599 FAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNA 656

Query: 291 FGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
            G  G   +G S   + +P+ +  L    V QIS G  H++  T
Sbjct: 657 MGQCG---QGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWT 697


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 145 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAI 202
           TP+S+  L  + +V Q+A G  + + ++ +G VY++G  S   LG G++       P+ +
Sbjct: 112 TPRSLEALSGI-TVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 203 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
           ++     + VV+VSAG +H  AL  SG V+ WG+  CG LG GD  D+  P  +  L   
Sbjct: 171 RSL--SSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             V     K  T VL   G+V+ FG   +G LG          L PR++  L    V++I
Sbjct: 229 KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG---HNSFRNALCPRLVAELWGAKVTKI 285

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLG 350
           + G YHT+V+TD  +++ FG NE  QLG
Sbjct: 286 ACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 12/220 (5%)

Query: 80  FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
           FC    D+  P F PR +EAL G+   QV  G   T  L+  G V+T G N+ GQLG G 
Sbjct: 102 FCV---DSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK 158

Query: 140 T--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHD 195
                  +P+ +  L  +  VVQ++AG  +  A++ +G V  FG G N C  LG G+  D
Sbjct: 159 EGCSSISSPQCVRSLSSM-PVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTD 215

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
              P  +     K    V  + G +H   L   G V+T+G G+ G LGH    +   P  
Sbjct: 216 RETPTLVHYLNMK--KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRL 273

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           ++ L      ++   +  T VL D   VY FG    G LG
Sbjct: 274 VAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 4/210 (1%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCK 106
           S   V QV+    H   + + GQV+T G NS    G  ++    I  P+ V +L  +P  
Sbjct: 120 SGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVV 179

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           QV+AG + +  L++ G V   G N  GQLG GDT DR TP  +  L  +   V  A G  
Sbjct: 180 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN-MKKTVFAACGKD 238

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           +   +T +G V++FGSG    LGH    + L PR +      G  V +++ G  H + L 
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELW--GAKVTKIACGRYHTLVLT 296

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
               VY++G    G LG  +E    +P P+
Sbjct: 297 DHMKVYSFGCNEHGQLGPREETHPCVPLPV 326



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T +GV     +G  FC+     H    PR+++     GI V +V+ G +H V L   G V
Sbjct: 88  TDDGVTLLSDTGVVFCVDSP--HPPFTPRSLEAL--SGITVTQVACGSQHTVVLSKDGQV 143

Query: 232 YTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
           YTWG+   G LG G E   ++  P+ + SL S   VQV A    +F L  +GSV+G+G  
Sbjct: 144 YTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRN 203

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G LG  D   +D+   P ++  L        + G  HT V+T  G +F FG     QL
Sbjct: 204 DCGQLGLGD--TTDRE-TPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQL 260

Query: 350 GHDTLRGCLEP 360
           GH++ R  L P
Sbjct: 261 GHNSFRNALCP 271



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 7/220 (3%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 59
           Q+  G  HT+++S +  V++ G +  G LG G E    +S  + +   S+  VVQVSA  
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGG 185

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           +H+  +  SG VF  G N     G  DT +R    P LV  L          G + T  L
Sbjct: 186 DHSFALSVSGSVFGWGRNDCGQLGLGDTTDRET--PTLVHYLNMKKTVFAACGKDHTAVL 243

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T+ G V T GS  +GQLGH    +   P+ +A L     V +IA G  + L +T +  VY
Sbjct: 244 TMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG-AKVTKIACGRYHTLVLTDHMKVY 302

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           SFG   +  LG  E+     P  +Q   R+G  +  + AG
Sbjct: 303 SFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAG 341



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 3/137 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +Q++ G  H+  +S S SVF  G + CG LG G +TT   + T +++ +    V  +  +
Sbjct: 179 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLG-DTTDRETPTLVHYLNMKKTVFAACGK 237

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           +H A +   G VFT G       GH ++ R    PRLV  L G    ++  G   T  LT
Sbjct: 238 DHTAVLTMDGTVFTFGSGHYGQLGH-NSFRNALCPRLVAELWGAKVTKIACGRYHTLVLT 296

Query: 120 IRGHVHTCGSNTHGQLG 136
               V++ G N HGQLG
Sbjct: 297 DHMKVYSFGCNEHGQLG 313


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 3/237 (1%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G        
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           +S  + H A V  + +++  G N+      G + T   + +P  V+ALK    K    G 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N T   T  G V+  G N  GQLG GDT +R T   I+       + Q++AG +   A+T
Sbjct: 97  NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++ +G  S   +G     +   P+ +      G  +  +S G  H   + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           T+G+  CG LG  ++  ++  +P+P+  +   + VQV      T VL +  +VY FG   
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG         V  P+ ++ ++   +S I+ G  HT ++TD G ++ FGD    +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 18/249 (7%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 63
           GR HTL+ +    V++ G +  G LG G +T +  +F  I+F  S   + Q+SA  N +A
Sbjct: 95  GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + G++F  GDNS    G  +    +  P+ V    G P   ++ G   + F+T  G 
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210

Query: 124 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
           ++T G    G+LG  + L      P P    P    G VVQ+A G  + + +T    VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265

Query: 180 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           FG G    LG G    E   P+AI+  + + I  +  + G+ H   +   G +YT+G G 
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323

Query: 239 CGALGHGDE 247
            G LG G E
Sbjct: 324 HGKLGLGLE 332



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 6/185 (3%)

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           GSG+ F  G  +  + +  +    F  +      +S GDEH   +  +  +Y +G    G
Sbjct: 10  GSGAVFTFGKTQFAENIPSK----FWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWG 65

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G +   + P  + +LK          +  T V  + G VY  G    G LG  D  
Sbjct: 66  QLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTE 125

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
                       S R   + Q+S G   +  +T+ G LF +GDN   Q+G + +     P
Sbjct: 126 ERSTFHLISFFTSQR--KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVP 183

Query: 361 TEIFI 365
            ++ +
Sbjct: 184 QQVTV 188



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCK--QV 108
           +  +S    H+AFV   GQ++T G+     CG     N+ +   R+ + + G+P K  QV
Sbjct: 192 ISWISCGYYHSAFVTTEGQLYTFGEPE---CGKLGLPNQLLVNHRMPQPVPGIPGKVVQV 248

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSY 167
             G   T  LT +  V+T G    GQLG G  L +   PK+I  +++   +  IA G ++
Sbjct: 249 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENH 306

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVV 213
              +T  G++Y+FG G +  LG G ++  ++  P     F R  + +V
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLV 354


>gi|313220445|emb|CBY31298.1| unnamed protein product [Oikopleura dioica]
          Length = 1097

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 31/289 (10%)

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIA---PLEE 154
           KG+    + +G   T  L +   V+  GSN  GQLG G  + R   P P   +   P++ 
Sbjct: 468 KGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQA 527

Query: 155 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVV 213
           +G+     A  S  L    N +V++ G+G N CLGHG +H   + P  +Q        VV
Sbjct: 528 IGT----GADFSVFLM---NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDL--ISYDVV 578

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           ++SAG +HV+AL S G VY+WG G  G LGHG +  +  P  ++SL+  +  ++ A    
Sbjct: 579 KISAGYKHVLALTSDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQEKIK-EIYAGYDS 637

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR------------PRILDSLRAHH-VS 320
           +F +  +G++Y  G      +G   R + D + R            P +   L ++  +S
Sbjct: 638 SFFIGISGNMYVCGSNRDNKIGLQKRSMLD-IFRLGHSRIPPYKDTPILSRQLNSNQTIS 696

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
           +IS    HTVV+T  G+LF  G N   Q G +  R  ++ + I I +++
Sbjct: 697 KISQARDHTVVLTSTGQLFTMGRNSEGQRGLENSRSMIDCSPIQIPKID 745



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M I +G  HTL++  N+ V+  GS+  G LG G +  +  +   + F +   V  +    
Sbjct: 473 MDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQAIGTGA 532

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           + + F++ +  VFTCG+  + C GH   ++    P +V+ L      +++AG      LT
Sbjct: 533 DFSVFLM-NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLALT 591

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVV 177
             G V++ G    G+LGHG      +P+ I  L+E   + +I AG   S+ + ++GN  +
Sbjct: 592 SDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQE--KIKEIYAGYDSSFFIGISGN--M 647

Query: 178 YSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIH----VVRVSAGDEHVVA 224
           Y  GS  +  +G  ++         H  + P        + ++    + ++S   +H V 
Sbjct: 648 YVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSRQLNSNQTISKISQARDHTVV 707

Query: 225 LDSSGYVYTWGKGYCGALG 243
           L S+G ++T G+   G  G
Sbjct: 708 LTSTGQLFTMGRNSEGQRG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAV 265
           +KG++++ + +GD H + LD +  VY  G    G LG G ++ +   PEP+    ++  V
Sbjct: 467 QKGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPV-KFSTNRPV 525

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
           Q         V +    V+  G    G LG      S   + P ++  L ++ V +IS G
Sbjct: 526 QAIGTGADFSVFLMNKMVFTCGNGENGCLGHGSEHKSS--MFPNMVQDLISYDVVKISAG 583

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGH 351
             H + +T  G ++ +G  E  +LGH
Sbjct: 584 YKHVLALTSDGDVYSWGCGELGRLGH 609


>gi|431839139|gb|ELK01066.1| Serine/threonine-protein kinase Nek9 [Pteropus alecto]
          Length = 964

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 28/271 (10%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 358 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 417

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 418 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPMQLNFF 476

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 477 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEVPKALIIV 534

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV------ 319
            V      TF+L  +G V   G   F  LG             + +  +  H V      
Sbjct: 535 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-----------NQCMSGIINHEVGTSFGI 583

Query: 320 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
             I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 584 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 614



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 37/298 (12%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 429 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPM---QLNFFLNNPVEQVS 485

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ VE  K +    V  G
Sbjct: 486 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVEVPKALIIVAVQCG 539

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 168
            + T  LT  G V  CG N   +LG    +      S     EVG+   +  IA G ++ 
Sbjct: 540 CDGTFLLTQSGKVLACGLNEFNKLGLNQCM------SGIINHEVGTSFGIRTIAPGKTHT 593

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            A+   G + +FG      LG G     L    +      G  V+RVS GDE  +A    
Sbjct: 594 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIAATDD 652

Query: 229 GYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
            +++ WG G  G L        HG +I  + P P+     H+    C R   T ++V+
Sbjct: 653 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILIVE 709



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 46/373 (12%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 329 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 384

Query: 67  QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 385 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 442

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGV 176
            G ++  GS+ +G +G         P+ + P++        V Q++ G ++++ +T N  
Sbjct: 443 EGQLYAFGSDYYGCMGVAKV---AGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKE 499

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VYS+G G    LG   + D   P+ ++    K + +V V  G +    L  SG V   G 
Sbjct: 500 VYSWGCGEYGRLGLDSEEDYYTPQKVEV--PKALIIVAVQCGCDGTFLLTQSGKVLACGL 557

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSH-----LAVQVCAR-KRKTFVLVDTGSVYGFGWMG 290
                LG        L + +S + +H       ++  A  K  T  + + G +  FG   
Sbjct: 558 NEFNKLG--------LNQCMSGIINHEVGTSFGIRTIAPGKTHTAAIDERGRLLTFGCNK 609

Query: 291 FGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            G LG    G   K L   +L   L    V ++S G   T+  TD   +F +G+    +L
Sbjct: 610 CGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 666

Query: 350 GHDTLRGCLEPTE 362
                   + PTE
Sbjct: 667 A-------MTPTE 672



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 365 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 424

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G   +    +VL P  L+    + V Q
Sbjct: 425 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVA-KVAGPEVLEPMQLNFFLNNPVEQ 483

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 484 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEV 527


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 146 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQ 203
           P  I P    G + +I A  +Y +++   G V+S+GSG    LG+ E+  + Q  P+ I+
Sbjct: 48  PVQITPDYWQGKLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIE 106

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
           TF  + I V +++ G  H  A  + G +YTWG+G  G LGHG   ++ +P+ +   +   
Sbjct: 107 TFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIR 166

Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
            +++      T  ++    VYG+G+   G LGF D     +V  P+ +       V QI 
Sbjct: 167 VLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL---SRVNLPKKIMFFNQKEVVQIQ 223

Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLG 350
            G  H++ +T  G+++ +G NE  QLG
Sbjct: 224 CGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 7/243 (2%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLV--EALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
           V+ C D+          N  I  P  +  +  +G   +++ A  N++  +  +G+V + G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQITPDYWQG-KLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 129 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           S   G+LG+  D   +  PK I        +V +IA G  +  A T  G +Y++G G N 
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
            LGHG   +E  P+ ++ F+   I V+ ++ GD H +A+ S   VY WG    G LG  D
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQD--IRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQD 201

Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
                LP+ +        VQ+   K+ +  L   G VY +G   +G LG      S K+ 
Sbjct: 202 LSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGIQLGKQSGKMT 261

Query: 307 RPR 309
            P 
Sbjct: 262 CPE 264



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENHAAFVLQSGQVFTCG 75
           V+ C       +  GP+  Q     +I  P      + ++ A  N++  +   G VF+ G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQIT-PDYWQGKLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 76  DNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
                  G+    +    P+++E  +++ +   ++  G + +   T +G ++T G   +G
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           QLGHG   +   PK +   +++  V++IA G S+ +A+    +VY +G      LG  + 
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQDI-RVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL 202

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
                P+ I  F +K   VV++  G +H +AL   G VY+WG    G LG
Sbjct: 203 SRVNLPKKIMFFNQK--EVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 18/192 (9%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG--------PETTQCVSFTRINFPSAAHVVQVSAS 58
            Y   + +  +VFS GS   G LG+         P+  +  S   I       V +++  
Sbjct: 68  NYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNI------IVTKIALG 121

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
            +H+A     G+++T G   +   GH  + N  I  P+ V+  + +   ++  G + T  
Sbjct: 122 THHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEI--PKKVKEFQDIRVLEIACGDSHTMA 179

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           +     V+  G N  GQLG  D      PK I    +   VVQI  G  + +A+T  G V
Sbjct: 180 IISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQ-KEVVQIQCGKKHSIALTVEGQV 238

Query: 178 YSFGSGSNFCLG 189
           YS+GS     LG
Sbjct: 239 YSWGSNEYGQLG 250



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 6/160 (3%)

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLS--SLKSHLAVQVCAR 270
           ++ A   + +++D+ G V++WG G  G LG+  ++  +  P+ +   S+++ +  ++   
Sbjct: 62  KIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALG 121

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              +    + G +Y +G    G LG    G +     P+ +   +   V +I+ G  HT+
Sbjct: 122 THHSAACTNQGKLYTWGQGVNGQLG---HGSNQNEEIPKKVKEFQDIRVLEIACGDSHTM 178

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
            +     ++G+G N+  QLG   L     P +I     +E
Sbjct: 179 AIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKE 218


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 15/287 (5%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 371
           G  HT+V+TD G+++ +G N   QLG         PT +    ME+D
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---TMEKD 308



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 33/371 (8%)

Query: 12  LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
           + S+S + + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSV-VAGSRNSLA-IADDGK 58

Query: 71  VFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
           +FT G N     GH    +  N+    P  V+AL  V   Q   G      +  +G  + 
Sbjct: 59  LFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYA 118

Query: 127 CGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYS 179
            G N +GQ G      D   RP  + I   +       V Q+AAG ++ + +T  G V++
Sbjct: 119 WGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWT 178

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTW 234
           +G                 P  I+      R +G+  VR ++ G  H +AL   G ++ W
Sbjct: 179 WGQ-------------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAW 225

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LG GD   ++ P  +  L     V + A    +  L D G VYG+G    G L
Sbjct: 226 GNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRL 285

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           GF D   S K++ P+ +  L    + Q+S G  H+V +T  G +F FG  +  +LG+   
Sbjct: 286 GFGDSDKSSKMV-PQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344

Query: 355 RGCLEPTEIFI 365
               +P E+ I
Sbjct: 345 VTTGQPMEVPI 355


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 167/381 (43%), Gaps = 41/381 (10%)

Query: 17  SVFSCGSSLCGVLGHGPE-TTQCVSFTRINF------PSAAHVVQVSASENHAAFVLQSG 69
           +  S G+   G LGHG   T   VSF   N+           V Q +A   H+ F+   G
Sbjct: 26  TALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGG 85

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
            VF CG N+    GH   +  +    LV+    V   +V AG N T  + + G V   G 
Sbjct: 86  FVFACGLNNYGQLGHGKHSAHVPEAALVDL--DVEVVRVAAGNNHTLCVDVDGGVWAFGK 143

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
           N  GQLG G  LD   P+ I  L   G +V +A+G  + LA++ +  VYS+G+ ++  LG
Sbjct: 144 NEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLG 203

Query: 190 HG-EQHDE----------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           HG E  +E           +PR ++        V  ++AG  H   +D  G ++TWG+G 
Sbjct: 204 HGSETWNEGWFYRTAKTVAKPRLLRALSE--TKVRSIAAGHMHSACVDERGELFTWGQGR 261

Query: 239 CGALGHGDE-ID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
              LG   + +D +T P+ + +L+     QV      T      G V  +G    G LG 
Sbjct: 262 FNQLGQTSKYVDHETAPKSVDTLR--FVHQVTCGGLHTLASTSAG-VVSWGANQHGELGH 318

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG--------DNER-- 346
                +   +   I  S R    S++S G  H+  V++ G+LF +G         +E+  
Sbjct: 319 GSNSDAKSAIPKPIKLSSRG--WSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLS 376

Query: 347 --AQLGHDTLRGCLEPTEIFI 365
              QLG        EPTE+++
Sbjct: 377 SGGQLGLGNDFDYWEPTEVWL 397



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 29/307 (9%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           Q   G  H++ +++   VF+CG +  G LGHG  +        ++      VV+V+A  N
Sbjct: 70  QCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLD--VEVVRVAAGNN 127

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 118
           H   V   G V+  G N     G    +   F+PR +E  AL+G     V +G   +  L
Sbjct: 128 HTLCVDVDGGVWAFGKNEGGQLG-TGLDLDGFQPRRIETLALEG-KIVDVASGAEHSLAL 185

Query: 119 TIRGHVHTCGSNTHGQLGHG-DTLDR----------PTPKSIAPLEEVGSVVQIAAGPSY 167
           +    V++ G++  G LGHG +T +             P+ +  L E   V  IAAG  +
Sbjct: 186 SEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSET-KVRSIAAGHMH 244

Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
              V   G ++++G G    LG   ++   E  P+++ T R     V +V+ G  H +A 
Sbjct: 245 SACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR----FVHQVTCGGLHTLAS 300

Query: 226 DSSGYVYTWGKGYCGALGHGDEID--KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
            S+G V +WG    G LGHG   D    +P+P+  L S    ++ A  + +  + + G +
Sbjct: 301 TSAG-VVSWGANQHGELGHGSNSDAKSAIPKPI-KLSSRGWSKLSAGWKHSAGVSNDGKL 358

Query: 284 YGFGWMG 290
           + +G+ G
Sbjct: 359 FAWGFGG 365



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 39/253 (15%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR----------INFPSA 49
           + + +G  H+L +S ++ V+S G+S  GVLGHG ET     F R          +   S 
Sbjct: 173 VDVASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSE 232

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI---FRPRLVEALKGVPCK 106
             V  ++A   H+A V + G++FT G       G   T++ +     P+ V+ L+ V   
Sbjct: 233 TKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQ--TSKYVDHETAPKSVDTLRFV--H 288

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAG 164
           QVT G   T   T  G V + G+N HG+LGHG   D  +  PK I  L   G   +++AG
Sbjct: 289 QVTCGGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPI-KLSSRG-WSKLSAG 345

Query: 165 PSYMLAVTGNGVVYSFGSG------------SNFCLGHGEQHDELQPRAIQTFRRKGIHV 212
             +   V+ +G ++++G G            S   LG G   D  +P  +          
Sbjct: 346 WKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEVWLPGD----A 401

Query: 213 VRVSAGDEHVVAL 225
           V VS G  H +AL
Sbjct: 402 VGVSCGFNHTLAL 414


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 3/237 (1%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G        
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 152/362 (41%), Gaps = 28/362 (7%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
            ++ S GS   G LG G    +      +   +A +V  V A   ++  + + G++FT G
Sbjct: 6   KAIISWGSGEDGQLGIG-NNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWG 64

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            N     GH    +    P  V+AL      Q   G      +  +G  +  G N +GQ 
Sbjct: 65  WNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 124

Query: 136 GH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+++G       
Sbjct: 125 GEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ------ 178

Query: 189 GHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALG 243
                     P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G LG
Sbjct: 179 -------PWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231

Query: 244 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
            GD   ++ P  +  L     V + A    +  L D G VYG+G    G LGF D   S 
Sbjct: 232 TGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSK 291

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V  P+ +  L   ++ QIS G  H+V +T  GR+F FG  +  +LG+        P E+
Sbjct: 292 MV--PQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEV 349

Query: 364 FI 365
            I
Sbjct: 350 PI 351



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 135/303 (44%), Gaps = 18/303 (5%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   + A +VQ +    H
Sbjct: 44  VVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWH 103

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 114
              V   G+ +  G N    CG       DT RP+ R   +       +  +QV AG   
Sbjct: 104 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTH 163

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           +  LT  GHV T G         GD     TP  +  LE+   V  IA G  + LA+  +
Sbjct: 164 SVVLTREGHVWTWGQ----PWPPGDIKQISTPVRVQGLEK---VRLIAVGAFHNLALLED 216

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G+++++G+     LG G+     QP A+Q      + +V ++AG  H  AL   G VY W
Sbjct: 217 GILWAWGNNEYGQLGTGDTQPRSQPIAVQGL--SDLTLVDIAAGGWHSTALTDDGGVYGW 274

Query: 235 GKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G+G  G LG GD+   K +P+ +  L     VQ+      +  L   G ++ FG    G 
Sbjct: 275 GRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGR 334

Query: 294 LGF 296
           LG+
Sbjct: 335 LGY 337


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V   SASE  A +V    +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDDDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLSGKKIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 225
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 13/270 (4%)

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V+  G NSS       T+  I +P+LV     V  +Q+ AG   T  +   G V  CG  
Sbjct: 360 VYAWGSNSSHQLA-EGTSEKILQPKLVTNFPKV--QQLEAGQYCTFVIDNDGAVSACGKG 416

Query: 131 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           ++G+LG GD+ ++  PK ++      V  +        + LA+T  G ++S+G G    L
Sbjct: 417 SYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKL 476

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           GHG    +  P+ IQ     G  V  + AG  H  A+   G +YTWG+G  G LGHGD  
Sbjct: 477 GHGNISTQKYPKLIQG-PLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNS 535

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
            + +P  +  + S++    C       V  D  +V+ F   G G LGF D   +++V RP
Sbjct: 536 GRNVPTLVKDI-SNVGQVACGSSHTIAVSQDGRTVWTF---GGGKLGFED---ANRVYRP 588

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
           +++D+    ++ +++ G + ++ +T  G++
Sbjct: 589 KVVDAFAGLYIRKVACGSHSSLALTSSGQV 618



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 16/236 (6%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
           Q+  G+Y T +I N  +V +CG    G LG G  + Q     +++F +   V ++S+S  
Sbjct: 393 QLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQTAP-KKLSFDATHLVKKISSSKG 451

Query: 59  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 116
            + H   +   G +F+ GD      GH + +   + P+L++  L G   K + AG   + 
Sbjct: 452 SDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKY-PKLIQGPLAGKVVKCICAGYRHSA 510

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 175
            +T  G ++T G    G+LGHGD   R  P  +  +  VG   Q+A G S+ +AV+ +G 
Sbjct: 511 AVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISNVG---QVACGSSHTIAVSQDGR 567

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
            V++FG G    LG  + +   +P+ +  F   G+++ +V+ G    +AL SSG V
Sbjct: 568 TVWTFGGGK---LGFEDANRVYRPKVVDAF--AGLYIRKVACGSHSSLALTSSGQV 618



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
           VVY++GS S+  L  G     LQP+ +  F +    V ++ AG      +D+ G V   G
Sbjct: 359 VVYAWGSNSSHQLAEGTSEKILQPKLVTNFPK----VQQLEAGQYCTFVIDNDGAVSACG 414

Query: 236 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFG 292
           KG  G LG GD  ++T P+ LS   +HL  ++ + K     T  L   G+++ +G   +G
Sbjct: 415 KGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYG 474

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  +  +S +     I   L    V  I  G  H+  VT+ G+L+ +G+ +  +LGH 
Sbjct: 475 KLGHGN--ISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHG 532

Query: 353 TLRGCLEPTEI 363
              G   PT +
Sbjct: 533 DNSGRNVPTLV 543


>gi|395503881|ref|XP_003756290.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sarcophilus
           harrisii]
          Length = 941

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 324 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 383

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 384 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQVDFF 442

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HV  L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 443 LNNPVE--QVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 500

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +              +   L 
Sbjct: 501 SVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLS 560

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 561 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 595



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   +++F     V QVS
Sbjct: 395 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QVDFFLNNPVEQVS 451

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH A + ++ +V++ G      CG       D+    + P+ V+  K +    V   
Sbjct: 452 CGDNHVAVLTRNKEVYSWG------CGEYGRLGLDSEEDYYIPQKVDVPKALIIVSVQCS 505

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 506 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLSFYKIR 565

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 566 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 624

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 625 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHIPDLSC-RGW 683

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 684 HTILIVE 690



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 364 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 422

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  V+     P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 423 MGVDKVAGPEVLEPMQVDFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSE 482

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D   P+ +  P   +   VQ +   +++L  +G  +          G N C+     H 
Sbjct: 483 EDYYIPQKVDVPKALIIVSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHD 542

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 543 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 602

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 603 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 662

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HH+  +S   +HT+++ ++
Sbjct: 663 SWPRP-IFGSL--HHIPDLSCRGWHTILIVEK 691



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 331 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 390

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  +D    + V Q
Sbjct: 391 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQVDFFLNNPVEQ 449

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 450 VSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 493



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 19/157 (12%)

Query: 214 RVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCAR 270
           R S  +E  +A+ +S    VY WG G            K+ P+ L  +KS   A QVCA 
Sbjct: 295 RSSTVNETPIAVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAG 342

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYH 328
                V+     +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   
Sbjct: 343 NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDF 402

Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 403 TVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQV 439


>gi|344246690|gb|EGW02794.1| Serine/threonine-protein kinase Nek9 [Cricetulus griseus]
          Length = 700

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 182 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 241

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 242 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 300

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 301 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 358

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 359 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 418

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 419 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 453



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 34/304 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 253 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 312

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 313 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 366

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVVQIA 162
           T  LT  G V  CG N   +LG    +          + P   S    +++    +  IA
Sbjct: 367 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 426

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 427 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 485

Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 486 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTI 544

Query: 276 VLVD 279
           ++V+
Sbjct: 545 LIVE 548



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 189 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 248

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 249 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 307

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 308 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 351



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 222 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 280

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G  + +   +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 281 MGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSE 340

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 341 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 400

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 401 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 460

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 461 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 520

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 521 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 549



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 153 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 208

Query: 67  QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 209 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 266

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 175
            G ++  GS+ +G +G    +D+ +  + + P++        V Q++ G ++++A+T N 
Sbjct: 267 EGQLYAFGSDYYGCMG----VDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNK 322

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 323 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 380

Query: 236 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 282
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 381 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 440

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 441 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 497

Query: 342 GDNERAQLGHDTLRGCLEPTE 362
           G+    +L        + PTE
Sbjct: 498 GNGGNGRLA-------MTPTE 511



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 281
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 164 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 211

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 212 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 271

Query: 340 GFGDNERAQLGHDTLRG--CLEPTEI 363
            FG +    +G D + G   LEP ++
Sbjct: 272 AFGSDYYGCMGVDKVSGSEVLEPMQL 297


>gi|345803705|ref|XP_547912.3| PREDICTED: serine/threonine-protein kinase Nek9 isoform 2 [Canis
           lupus familiaris]
          Length = 976

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      I           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLNNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 149/362 (41%), Gaps = 40/362 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 67  QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 175
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNK 499

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 236 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 282
                 LG               EI  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 342 GD 343
           G+
Sbjct: 675 GN 676



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|444511454|gb|ELV09900.1| Serine/threonine-protein kinase Nek9 [Tupaia chinensis]
          Length = 674

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 165 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 224

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 225 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 283

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 284 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 341

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 342 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 401

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 402 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 436



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 172 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 231

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 232 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 290

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 291 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 334



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 123 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 166

Query: 255 PLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 311
            L  +KS   A QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 167 KLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 226

Query: 312 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 363
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 227 EKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 280


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           +VQ++  ++H+  + + G +FT G N+    G    +  I +P+LV+ LKG+P  Q+ AG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
              +  +++ G V++ G N  GQLG G T DR  P  +  LE   +V  I+ G  +   +
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVF-ISCGEDHTAVL 203

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 230
           + NG+V++FG+G    LGH    +E +PR +      G  V  V+ G +H +V + S   
Sbjct: 204 SKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELW--GARVSLVACGRQHTLVYVPSLDK 261

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSS 258
           VY++G  Y G LG   + ++ +P P++S
Sbjct: 262 VYSFG-SYEGQLGSERKANQLIPLPINS 288



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIH 211
           E   +VQIA G  + +A++  G ++++G  ++  LG G Q D L  +P+ ++    KGI 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQ-DLLISKPQLVKGL--KGIP 137

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
           + +++AG  H V +  SG VY+WGK   G LG G   D+  P  + +L+   AV +   +
Sbjct: 138 LAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVFISCGE 197

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T VL   G V+ FG  G G LG      +    RPR++  L    VS ++ G  HT+V
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLG---HNSTRNEFRPRMVAELWGARVSLVACGRQHTLV 254

Query: 332 -VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            V    +++ FG  E  QLG +     L P  I
Sbjct: 255 YVPSLDKVYSFGSYE-GQLGSERKANQLIPLPI 286



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 18/249 (7%)

Query: 43  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEAL 100
           R+ F     V  ++  E H       G+++ C            T  P    + RLV+ L
Sbjct: 32  RVWFKGKEKVWCLNCDETHVLVCSCDGKLYECW-----------TTAPGKTSKLRLVKEL 80

Query: 101 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVV 159
           +     Q+  G + +  L+  G + T G NTHGQLG G   L    P+ +  L+ +  + 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGI-PLA 139

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           QIAAG ++ + V+ +G VYS+G      LG G   D   P  ++         V +S G+
Sbjct: 140 QIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH--WKAVFISCGE 197

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLV 278
           +H   L  +G V+T+G G  G LGH    ++  P  ++ L  + +++  C R+     + 
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELWGARVSLVACGRQHTLVYVP 257

Query: 279 DTGSVYGFG 287
               VY FG
Sbjct: 258 SLDKVYSFG 266


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 26/332 (7%)

Query: 33  PETTQCVSFTRINF----PSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNSSFCCG 83
           PET    +F +  F    PS   +     ++++  + H A + ++G++F  G N+    G
Sbjct: 10  PETGAVFTFGKSKFADNIPSKFWLKNDVPLKIACGDEHTALITKNGRLFMFGSNNWGQLG 69

Query: 84  HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 143
              + R + +P  V+ALK      V  G N T   T +G V + G N+ GQLG GD  +R
Sbjct: 70  -LGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEER 128

Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
            T + I   + +G V  +AAG +   A+T +G ++ +G  +   +G  ++     P+ + 
Sbjct: 129 TTFQRIHAFDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD 188

Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKS 261
                G  +  VS G  H   + + G +YT+G+   G LG   E      +P+ + S+K 
Sbjct: 189 V----GGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE 244

Query: 262 HLAVQVCARKRKTFVLVDTGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
            +    C       +  +    +G   FG +G G+  F  R        PR ++  +   
Sbjct: 245 PVTQVACGGGHTVALTEERLFTFGLGQFGQLGHGTFIFESR-------LPRPVEHFKKGR 297

Query: 319 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           V Q++ G  HT V+TD G L+ FGD    +LG
Sbjct: 298 VCQVACGENHTAVITDGGLLYTFGDGRHGKLG 329



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 25/342 (7%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 55
           ++I  G  HT LI+ N  +F  GS+  G LG G + T     CV   +        V+ V
Sbjct: 39  LKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTE-----KVLLV 93

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV-PCKQVTAGLN 113
           +   NH       G+VF+ G NS    G  D   R  F+   + A   + P K + AG N
Sbjct: 94  ACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ--RIHAFDSLGPVKMLAAGSN 151

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            +  LT  G +   G NT GQ+G       P+P+ +   +  G +  ++ G  +   VT 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEV---DVGGPISWVSCGYYHSAFVTA 208

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           +G +Y+FG   +  LG   +       P+ +++ +     V +V+ G  H VAL +   +
Sbjct: 209 DGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEP---VTQVACGGGHTVAL-TEERL 264

Query: 232 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           +T+G G  G LGHG  I +  LP P+   K     QV   +  T V+ D G +Y FG   
Sbjct: 265 FTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGR 324

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
            G LG  +   +++  +P +      + V   + G  H VV+
Sbjct: 325 HGKLGLGEENFTNQ-FKPTVCSRFLKYGVQAATCGGCHMVVL 365



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 18/257 (7%)

Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQ 160
           VP K +  G   T  +T  G +   GSN  GQLG G   T+++PT       E+V   + 
Sbjct: 37  VPLK-IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKV---LL 92

Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
           +A G ++ L  T  G V+S G  S   LG G+  +    + I  F   G  V  ++AG  
Sbjct: 93  VACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLG-PVKMLAAGSN 151

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
              AL  SG ++ WG    G +G   E     P+ +  +   ++   C      FV  D 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD-VGGPISWVSCGYYHSAFVTAD- 209

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVVVTDRGR 337
           G++Y FG    G LG      ++++ R   P+++ S++   V+Q++ G  HTV +T+  R
Sbjct: 210 GALYTFGECDSGKLGL----TTEQLPRHRVPQMVKSIK-EPVTQVACGGGHTVALTEE-R 263

Query: 338 LFGFGDNERAQLGHDTL 354
           LF FG  +  QLGH T 
Sbjct: 264 LFTFGLGQFGQLGHGTF 280


>gi|402876741|ref|XP_003902114.1| PREDICTED: serine/threonine-protein kinase Nek9 [Papio anubis]
          Length = 979

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYIPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 528



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V   SASE  A +V    +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDDDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLSGKKIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 225
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 315

Query: 112 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 316 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 375

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 376 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 433

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 434 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 493

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 494 CLGTVYTMGRLG----DTEDRNS------PAVVEELRYRQVESIACGSGFTAAI 537



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 230 VYRFGNQ------NGMQSDALLPKLLES--TTMLDVREISLGGKHAALVTKHGEVFCWGE 281

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 282 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 341

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 342 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 401

Query: 357 CLEPTEI 363
             +P E+
Sbjct: 402 ISQPKEV 408



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 314

Query: 218 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 315 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 374

Query: 276 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 332
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 375 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 431

Query: 333 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 361
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 432 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 469



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 246 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 305

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 211
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 306 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 363

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 261
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 364 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 423

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 424 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 480

Query: 321 QISTGLYHTVVVTDRGRLFGFG 342
           Q+S G   TV +T  G ++  G
Sbjct: 481 QVSCGRMLTVGLTCLGTVYTMG 502



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 49
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 367 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 426

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 427 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 483

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 484 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 535

Query: 170 AV 171
           A+
Sbjct: 536 AI 537


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 12  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 70
           +  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 71  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYN 154

Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 190
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 191 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 251 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 9/281 (3%)

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           PIF     E LK +    V    N   ++T    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 150 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRR 207
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 208 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQ 266
           K  H   V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   + 
Sbjct: 127 KKAH--SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
           +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G 
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCGY 241

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYITKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V++ G N + QLG+G T    +P  ++          +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVY 149

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 295
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 296 -----FPDRGVSDKVLRPRILDSLRAH 317
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 11/300 (3%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
           + +S  + H A +  + +++  G N+    G   +   ++RP  V+ALK    K    G 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLG-LGSKSAVYRPICVKALKSEKVKLAACGR 92

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
           N T   T  G+V+  G N  GQLG GDT +R +   I+       + Q++AG +   A+T
Sbjct: 93  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALT 152

Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
            +G ++ +G  S   +G     +   PR +      G  +  +S G  H   +   G +Y
Sbjct: 153 EDGELFMWGDNSEGQIGLNSISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLY 208

Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           T+G+  CG LG   E  I+   P+ +S + S   +QV      T VL +  +VY FG   
Sbjct: 209 TFGEPECGKLGLPSEQLINHRKPQLVSGI-SEKVIQVACGGGHTVVLTEK-AVYTFGQGR 266

Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           FG LG        +   P IL+ ++   +  IS G  HT ++TD G ++ FGD    +LG
Sbjct: 267 FGQLGLG--SFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLG 324



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 14/247 (5%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
           GR HTL+ +   +V++ G +  G LG G +T +  SF  I+F ++ H + Q+SA  N +A
Sbjct: 91  GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNSFHLISFFTSRHKIKQLSAGANISA 149

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + G++F  GDNS    G    +  ++ PR V    G P   ++ G   + F+T+ G 
Sbjct: 150 ALTEDGELFMWGDNSEGQIGLNSISN-VYVPRQVTV--GKPISWISCGYYHSAFVTMEGK 206

Query: 124 VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++T G    G+LG      ++   P+ ++ + E   V+Q+A G  + + +T    VY+FG
Sbjct: 207 LYTFGEPECGKLGLPSEQLINHRKPQLVSGISE--KVIQVACGGGHTVVLT-EKAVYTFG 263

Query: 182 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G    LG G       +P  ++  + + I    +S G+ H   +   G++YT+G G  G
Sbjct: 264 QGRFGQLGLGSFIFQAPEPAILEHVKDQKIR--HISCGENHTALITDVGHMYTFGDGRHG 321

Query: 241 ALGHGDE 247
            LG G E
Sbjct: 322 KLGLGLE 328



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)

Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARK 271
           + +S GDEH   +  +  +Y +G    G LG G +     P  + +LKS  + +  C R 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRN 93

Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
             T V  + G+VY  G    G LG  D    +         S   H + Q+S G   +  
Sbjct: 94  H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAA 150

Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +T+ G LF +GDN   Q+G +++     P ++ +
Sbjct: 151 LTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV 184



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 59
           I+ G YH+  ++    +++ G   CG LG   E  Q ++  +    S  +  V+QV+   
Sbjct: 191 ISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSE--QLINHRKPQLVSGISEKVIQVACGG 248

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 116
            H   VL    V+T G       G       IF+   P ++E +K    + ++ G N T 
Sbjct: 249 GHTV-VLTEKAVYTFGQGR---FGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTA 304

Query: 117 FLTIRGHVHTCGSNTHGQLGHG 138
            +T  GH++T G   HG+LG G
Sbjct: 305 LITDVGHMYTFGDGRHGKLGLG 326


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           G+VY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GMVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 167/384 (43%), Gaps = 25/384 (6%)

Query: 2    QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVS-- 56
            ++  G  H+L++ N   ++S G +  G+LG G   + T+ V  T +     + VV +S  
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPV-LTDLTPLGGSTVVSISTG 1490

Query: 57   --ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 111
              AS + A  +   G+++  G N +   G     D NRP+     + +L       V AG
Sbjct: 1491 SGASRSQA--IDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVD--LASLGSSKVTAVAAG 1546

Query: 112  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG--SVVQIAAGPSYM 168
                  L  +  +   G N  GQLG G   +   P  I   LE +   +V  + AG  + 
Sbjct: 1547 RYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHS 1606

Query: 169  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
            + +   G ++ +G      LG G    + +P  +      G  V+ VSAG+ H VALD  
Sbjct: 1607 IILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQ 1666

Query: 229  GYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            G ++ WG    G LG G   D+  P    L+SL  H  V + A    T  L + G ++ +
Sbjct: 1667 GGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAW 1726

Query: 287  GWMGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            G    G LG    G +    RP  +D   L    V  +S G ++  VV DRG L+ +G N
Sbjct: 1727 GPNESGLLG---DGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSN 1783

Query: 345  ERAQLGHDTLRGCLEPTEIFIQEM 368
               QLG  T    L+P  + +  M
Sbjct: 1784 SYGQLGDGTKTRRLKPVRVDMSAM 1807



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 24/318 (7%)

Query: 18   VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
            +++ G +  G LG G       P      S        ++ V  V+A   H   +    +
Sbjct: 1505 LWAWGYNFAGALGDGTGIDRNRPVLVDLASL------GSSKVTAVAAGRYHNLVLDDQSR 1558

Query: 71   VFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            ++  G N     G     +   P+     +E L G     V AG   +  L   G +   
Sbjct: 1559 LWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVW 1618

Query: 128  GSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
            G N +G+LG G T    RP    + PL     V+ ++AG  + +A+   G ++++G   +
Sbjct: 1619 GKNKYGELGDGTTTYQTRPVLVDLLPLNGR-KVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677

Query: 186  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
              LG G   D  +P  +      G  VV +SAG  + VALD  G ++ WG    G LG G
Sbjct: 1678 GRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDG 1737

Query: 246  DEIDKTLP--EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
              I++  P    L+ L     V V A     FV+ D G ++ +G   +G LG    G   
Sbjct: 1738 TTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLG---DGTKT 1794

Query: 304  KVLRPRILDSLRAHHVSQ 321
            + L+P  +D    ++ S+
Sbjct: 1795 RRLKPVRVDMSAMNNTSK 1812



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 156  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
            G   ++AAG  + L +     ++S+G   +  LG G   D  +P         G  VV +
Sbjct: 1428 GDKNRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSI 1487

Query: 216  SAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EPLSSLKSHLAVQVCARK 271
            S G       A+D  G ++ WG  + GALG G  ID+  P    L+SL S     V A +
Sbjct: 1488 STGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGR 1547

Query: 272  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQISTGLYHTV 330
                VL D   ++ +G  G G LG   R      L  ++ L+ L    V+ +  G +H++
Sbjct: 1548 YHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSI 1607

Query: 331  VVTDRGRLFGFGDNERAQLGHDT 353
            ++ D GRL+ +G N+  +LG  T
Sbjct: 1608 ILDDLGRLWVWGKNKYGELGDGT 1630



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 14/274 (5%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIA- 162
             ++ AG   +  L  +  + + G N  G LG G   DR  P  +  L  +G  +VV I+ 
Sbjct: 1431 NRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRP-VLTDLTPLGGSTVVSIST 1489

Query: 163  -AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
             +G S   A+   G ++++G      LG G   D  +P  +         V  V+AG  H
Sbjct: 1490 GSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYH 1549

Query: 222  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP----LSSLKSHLAVQVCARKRKTFVL 277
             + LD    ++ WG    G LG G   +   P P    L  L       V A    + +L
Sbjct: 1550 NLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIIL 1609

Query: 278  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDR 335
             D G ++ +G   +G LG    G +    RP ++D   L    V  +S G +HTV + ++
Sbjct: 1610 DDLGRLWVWGKNKYGELG---DGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQ 1666

Query: 336  GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
            G L+ +G N+  +LG  +      P ++ +  ++
Sbjct: 1667 GGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLD 1700


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 11/298 (3%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           ++  + H A +  + +++  G N     G   +   + +P  V+ALK    K V  G N 
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLG-LGSKSAVCKPTCVKALKPEKVKHVACGRNH 92

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T  G V+  G N  GQLG GDT DR T   I          Q++AG +   A+T +
Sbjct: 93  TLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTED 152

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++ +G  S   +G     +   P  +      G  +  +S G  H   +   G +YT+
Sbjct: 153 GKLFMWGENSEGQIGLNNVCNVYFPHEVTV----GKPIAWISCGYYHSAFVTMEGELYTF 208

Query: 235 GKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G+   G LG   ++  +  +P+ +  +   + +QV      T VL +  +VY FG   FG
Sbjct: 209 GEPEFGKLGLPKQLLMNHKVPQLVPGIPEKV-IQVACGGGHTVVLTEK-AVYNFGLGQFG 266

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            LG        +   P+I++S++ H ++ IS G  HT ++TD GR++ FGD    +LG
Sbjct: 267 QLGLGT--FVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLG 322



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 147/336 (43%), Gaps = 19/336 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  HT +I+ N  ++  G +  G LG G ++  C   T +       V  V+   NH
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKP-TCVKALKPEKVKHVACGRNH 92

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGV-PCKQVTAGLNFTGFLT 119
                + G+V+  G N+    G  DT +R  F   L+E        KQ++AG N +  LT
Sbjct: 93  TLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTF--HLIEFFTSQHQFKQLSAGSNTSAALT 150

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVY 178
             G +   G N+ GQ+G  +  +   P  +     VG  +  I+ G  +   VT  G +Y
Sbjct: 151 EDGKLFMWGENSEGQIGLNNVCNVYFPHEVT----VGKPIAWISCGYYHSAFVTMEGELY 206

Query: 179 SFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +FG      LG  +Q   +   P+ +     K   V++V+ G  H V L     VY +G 
Sbjct: 207 TFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEK---VIQVACGGGHTVVLTEKA-VYNFGL 262

Query: 237 GYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
           G  G LG G  + + T P+ + S+K H    +   +  T ++ D G +Y FG   +G LG
Sbjct: 263 GQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLG 322

Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
                 +++ + P +  +     V  ++ G  H VV
Sbjct: 323 LGMENFTNQFV-PTLCPNFLRFKVHLVACGGCHMVV 357



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 14/251 (5%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 59
            +  GR HTL+ +    V++ G +  G LG G +T    +F  I F ++ H   Q+SA  
Sbjct: 85  HVACGRNHTLVSTEGGKVYAVGGNNEGQLGLG-DTEDRNTFHLIEFFTSQHQFKQLSAGS 143

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           N +A + + G++F  G+NS    G  +    ++ P   E   G P   ++ G   + F+T
Sbjct: 144 NTSAALTEDGKLFMWGENSEGQIGLNNVCN-VYFPH--EVTVGKPIAWISCGYYHSAFVT 200

Query: 120 IRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           + G ++T G    G+LG    L  +   P+ +  + E   V+Q+A G  + + +T    V
Sbjct: 201 MEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPE--KVIQVACGGGHTVVLT-EKAV 257

Query: 178 YSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           Y+FG G    LG G    +  +P+ +++ +   I    +S G+ H   +   G +YT+G 
Sbjct: 258 YNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKI--TYISCGENHTALITDIGRMYTFGD 315

Query: 237 GYCGALGHGDE 247
           G  G LG G E
Sbjct: 316 GRYGKLGLGME 326



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 2/151 (1%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++ GDEH   +  +  +Y +G+   G LG G +     P  + +LK      V   +  T
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
            V  + G VY  G    G LG  D    D+     I      H   Q+S G   +  +T+
Sbjct: 94  LVSTEGGKVYAVGGNNEGQLGLGD--TEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTE 151

Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
            G+LF +G+N   Q+G + +     P E+ +
Sbjct: 152 DGKLFMWGENSEGQIGLNNVCNVYFPHEVTV 182


>gi|440901734|gb|ELR52623.1| Serine/threonine-protein kinase Nek9, partial [Bos grunniens mutus]
          Length = 888

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 374 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 433

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 434 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFF 492

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 493 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 550

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSD-----KVLRP---RILDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +     +V  P    +   L 
Sbjct: 551 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLS 610

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 611 FYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG 645



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 381 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 440

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD   ++ V Q
Sbjct: 441 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGAEVLEPMQLDFFLSNPVEQ 499

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 500 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 543



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 34/304 (11%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ +++   +++ GS   G +G       + +   +++F  +  V QVS  +
Sbjct: 445 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGD 504

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 505 NHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 558

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
           T  LT  G V  CG N   +LG          H    + P P S    +++    +  IA
Sbjct: 559 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIA 618

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 619 PGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 677

Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 678 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWNTI 736

Query: 276 VLVD 279
           ++V+
Sbjct: 737 LIVE 740



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 345 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 400

Query: 67  QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 401 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 458

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 175
            G ++  GS+ +G +G    +D+    + + P++        V Q++ G ++++ +T N 
Sbjct: 459 EGQLYAFGSDYYGCMG----VDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNK 514

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 515 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 572

Query: 236 KGYCGALGHGD--------EIDKTLPEPLS-SLKSHLAV----QVCARKRKTFVLVDTGS 282
                 LG           E    +P P S +L   L+      +   K  T  L + G 
Sbjct: 573 LNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIAPGKTHTAALDERGR 632

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 633 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 689

Query: 342 GDNERAQLGHDTLRGCLEPTE 362
           G+    +L        + PTE
Sbjct: 690 GNGGNGRLA-------MTPTE 703



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 281
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 356 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 403

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 404 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 463

Query: 340 GFGDNERAQLGHDTLRGC--LEPTEI 363
            FG +    +G D + G   LEP ++
Sbjct: 464 AFGSDYYGCMGVDKVAGAEVLEPMQL 489


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 127

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 247

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 96  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 152

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 153 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 212

Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 213 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 269

Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 270 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 118
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 119

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 238

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 239 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 16  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
           S ++  GS   G  G G  + +  + + +     + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANG--GLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 76  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 135
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 136 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 195
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G +     P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTKKSSNSPVL 278

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 316 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 11/208 (5%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G   +L +S + +V++ G++  G LG+G   T+  +   +       V+ +S  E  
Sbjct: 189 IDAGEEFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELTDVIAISTGEKQ 245

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              V  +G V+  G N         T +    P L++ +  V    V +G   T  L   
Sbjct: 246 GYAVTSNGDVYGWGYNQGKLG--DGTKKSSNSPVLIDGIYDVIA--VDSGKQHTLALKED 301

Query: 122 GHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
           G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +  A+  +G V+
Sbjct: 302 GTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTVW 361

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           S+G  SN  LG G    ++ P  I+T  
Sbjct: 362 SWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
           porcellus]
          Length = 531

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 16/285 (5%)

Query: 90  PIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           PIF    P+ V +++       +A  N   ++T    V   G N    LG GD      P
Sbjct: 8   PIFTLLSPQEVASIRKACVFGTSA--NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP 65

Query: 147 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           K +  L  +++ S+    +GP  +L+ T +GVVY++G      LG+G  +  + P  IQ 
Sbjct: 66  KKLEALCGKKIKSL-SYGSGPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAP--IQV 121

Query: 205 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 262
                I  VV V+ G  H +AL + G V+ WG   CG +G G   ++  P  +++ L   
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVK 181

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             V +   +  +  ++D+G VYG+G+ G G LG  + G     L P  + +L    V+QI
Sbjct: 182 RVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNG---NQLTPMRVAALHRVCVNQI 238

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             G  HT+ +TD G L+ +G N   QLG       L P  I +++
Sbjct: 239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIMVEK 283



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 12/256 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +HV RV   + G    +A+  SG VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHVKRVVGIACGQTSSMAVLDSGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRPR 309
           LG    G  + +L P 
Sbjct: 265 LG---TGNKNNLLNPE 277



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++PTP+ +     V  VV IA G +  +AV  +G VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +    R  + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPMRVAALHR--VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   PE +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL SG+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGVV 177
             G ++  G+NT+GQLG G+  +   P+ I  + E   VV+IAA  S  +  A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLNPEHI--MVEKERVVEIAACHSTHISAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|354481280|ref|XP_003502830.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cricetulus
           griseus]
          Length = 1019

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 402 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 461

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 462 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 520

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 521 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 578

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 579 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 638

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 639 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 673



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 38/306 (12%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 473 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 532

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 533 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 586

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVVQIA 162
           T  LT  G V  CG N   +LG    +          + P   S    +++    +  IA
Sbjct: 587 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 646

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDE 220
            G ++  A+   G + +FG      LG G     L    I        G  V+RVS GDE
Sbjct: 647 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSCGDE 703

Query: 221 HVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             +A     +++ WG G  G L        HG +I  + P P+     H+    C R   
Sbjct: 704 FTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWH 762

Query: 274 TFVLVD 279
           T ++V+
Sbjct: 763 TILIVE 768



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 409 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 468

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 469 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 527

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 528 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 571



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 442 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 500

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G  + +   +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 501 MGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSE 560

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 561 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 620

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 621 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 680

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 681 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 740

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 741 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 769



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 280
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 383 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 430

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 431 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 490

Query: 339 FGFGDNERAQLGHDTLRG--CLEPTEI 363
           + FG +    +G D + G   LEP ++
Sbjct: 491 YAFGSDYYGCMGVDKVSGSEVLEPMQL 517


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 34/308 (11%)

Query: 69  GQVFTCGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGH-V 124
           G V+  G N    CG + TN+ I  P  +        +  KQ+  G + +  +  + + V
Sbjct: 97  GLVYAWGYNYFGQCGDK-TNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGV 155

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV------QIAAGPSYMLAVTGNGVVY 178
           ++ G N  GQLGHGD L+R  P  ++ +              +A G  + + V+  G +Y
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELY 215

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           +FG G+   LGHG++  + +P  + +   K I  V V+AG  H   +DS+G +Y+WG   
Sbjct: 216 TFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSI--VSVAAGVMHSSCVDSNGKIYSWGWNR 273

Query: 239 CGALGHGDEIDKTLPEP-------LSSLKS-----HLA----VQVCARKRKTFVLVDTGS 282
            G LG+G    +TLP P       LS ++      HL     ++V   K  T  L  +G 
Sbjct: 274 YGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGE 333

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           V GFG+   G LG    G     L P  ++     HV  I++G YH++ +TD G  + +G
Sbjct: 334 VVGFGFNACGQLG---NGNHMDQLYPVKIE--FNEHVIDIASGYYHSLCLTDNGEAYSWG 388

Query: 343 DNERAQLG 350
                 LG
Sbjct: 389 YMSDGSLG 396



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 25/269 (9%)

Query: 122 GHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VY 178
           G V+  G N  GQ G     T+  PT      ++    + QIA G S+ LA+      VY
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-----RVSAGDEHVVALDSSGYVYT 233
           S+G      LGHG+Q +  QP  +                 V+ G +H + + + G +YT
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELYT 216

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           +G G  G LGHGDE  K  P P+SSL     V V A    +  +   G +Y +GW  +G 
Sbjct: 217 FGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQ 276

Query: 294 LGFPDRGVSDKVL-------RPRILD---SLRAHHVSQIS-----TGLYHTVVVTDRGRL 338
           LG  +  V  + L        P++ D     + HH+ +++      G  HT+ ++  G +
Sbjct: 277 LG--NGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEV 334

Query: 339 FGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
            GFG N   QLG+      L P +I   E
Sbjct: 335 VGFGFNACGQLGNGNHMDQLYPVKIEFNE 363



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 176/410 (42%), Gaps = 61/410 (14%)

Query: 2   QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPE------TTQCVSFTRINFPSAAHVV 53
           QI  G  H+L I+     V+S G +  G LGHG +      T      +     ++    
Sbjct: 137 QIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFS 196

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
            V+    H+  V   G+++T G  ++   GH D  +P F+P  V +L G     V AG+ 
Sbjct: 197 MVACGSQHSMIVSNYGELYTFGCGTTGRLGHGD-EQPKFKPTPVSSLVGKSIVSVAAGVM 255

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIA--PLEEVG-----------SV 158
            +  +   G +++ G N +GQLG+G    +  PTP       L ++            + 
Sbjct: 256 HSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNF 315

Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
           +++  G ++ LA++ +G V  FG  +   LG+G   D+L P  I+ F     HV+ +++G
Sbjct: 316 IKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIE-FNE---HVIDIASG 371

Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
             H + L  +G  Y+WG    G+LG G+                  V     K K   LV
Sbjct: 372 YYHSLCLTDNGEAYSWGYMSDGSLGLGE------------------VYTHQTKPKLIPLV 413

Query: 279 DTGSVYGFGWMGFGSL-GFPDRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVVVT 333
                +      F  + G  D   + + +    L   + +     V  IS G +++ ++T
Sbjct: 414 HIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAIIT 473

Query: 334 DRGRL--FGFGDNER----AQLGHDTLRGCLEPTEIFIQ---EMEEDTGL 374
             G+L  FGFGD  R    ++   D +   +EPT+  ++    ++EDT +
Sbjct: 474 SSGKLFCFGFGDTYRNGNQSEFDQD-MPIIVEPTKWGLERPFNIKEDTDI 522


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 112 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 225
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 226 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 546 CLGTVYTMGRLG----DTEDRN------SPAVVEELRYRQVESIACGSGFTAAI 589



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 357 CLEPTEI 363
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 218 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 276 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 332
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 333 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 361
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 357

Query: 154 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 211
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 358 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 415

Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 261
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 416 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 475

Query: 262 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 476 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 532

Query: 321 QISTGLYHTVVVTDRGRLFGFG 342
           Q+S G   TV +T  G ++  G
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMG 554



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 49
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 479 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 535

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 536 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 587

Query: 170 AV 171
           A+
Sbjct: 588 AI 589


>gi|348573398|ref|XP_003472478.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cavia
           porcellus]
          Length = 992

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 SDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P  + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 20/331 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 IGVDKIAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ  +  +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQRVDVPKALIIVAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKV 305
                L   L     ++V      T    D   ++ +G  G G L         G     
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICT 697

Query: 306 LRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
             PR I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 33/323 (10%)

Query: 54  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
           Q+S  + H A + ++G++F  G N+    G   +   + +P  V+ALK         G N
Sbjct: 30  QISCGDEHTALITKNGRLFMFGSNNWGQLG-LGSKVTVNKPTCVKALKSEKVLLAACGRN 88

Query: 114 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
            T   T  G V + G N+ GQLG GD  +R T + I  L+ +G +  +AAG +   A+T 
Sbjct: 89  HTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAALTE 148

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           +G ++ +G  +   +G G++     P+ +      G  V  VS G  H   + ++G +YT
Sbjct: 149 SGKLFMWGDNTEGQIGLGKESHAPWPQEVSV----GAPVSWVSCGYYHSALVTAAGALYT 204

Query: 234 WGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCA-------------RKRKT---- 274
           +G+   G LG   E      +P+P+ S+   +    C              R+R      
Sbjct: 205 FGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRG 264

Query: 275 -------FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
                  F+ +    ++ FG   FG LG        ++  PR+++  +   V Q++ G  
Sbjct: 265 FAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRL--PRLVEHFKKGRVRQVACGEN 322

Query: 328 HTVVVTDRGRLFGFGDNERAQLG 350
           H+ V+TD G L+ FGD    +LG
Sbjct: 323 HSAVITDGGLLYTFGDGRHGKLG 345



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 152/357 (42%), Gaps = 51/357 (14%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS------AAHVVQ 54
           QI+ G  HT LI+ N  +F  GS+  G LG G + T       +N P+      +  V+ 
Sbjct: 30  QISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVT-------VNKPTCVKALKSEKVLL 82

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV-PCKQVTAGL 112
            +   NH       G+VF+ G NS    G  D   R  FR   + AL  + P K + AG 
Sbjct: 83  AACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFR--RIHALDSLGPIKMLAAGS 140

Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAV 171
           N +  LT  G +   G NT GQ+G G     P P+ ++    VG+ V  ++ G  +   V
Sbjct: 141 NTSAALTESGKLFMWGDNTEGQIGLGKESHAPWPQEVS----VGAPVSWVSCGYYHSALV 196

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 225
           T  G +Y+FG   +  LG   +    + R  Q  R  G  V +V+ G  H VAL      
Sbjct: 197 TAAGALYTFGERDSGKLGLTTEQLP-RHRVPQPVRSIGEPVRQVACGGGHTVALTGGGST 255

Query: 226 ------------DSSGYVY-------TWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAV 265
                       D +G+++       T+G G  G LGHG  + +  LP  +   K     
Sbjct: 256 RRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVR 315

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
           QV   +  + V+ D G +Y FG    G LG  D   +++  +P +      + V  +
Sbjct: 316 QVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTNQ-FKPTLCSRFLKYGVQAV 371



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 116/282 (41%), Gaps = 35/282 (12%)

Query: 100 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
           LK     Q++ G   T  +T  G +   GSN  GQLG G  +    P  +  L+    V+
Sbjct: 23  LKNDVPSQISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSE-KVL 81

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
             A G ++ L  TG G V+S G  S   LG G+  +    R I      G  +  ++AG 
Sbjct: 82  LAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLG-PIKMLAAGS 140

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
               AL  SG ++ WG    G +G G E     P+ + S+ + ++   C       V   
Sbjct: 141 NTSAALTESGKLFMWGDNTEGQIGLGKESHAPWPQEV-SVGAPVSWVSCGYYHSALVTA- 198

Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRG- 336
            G++Y FG    G LG      ++++ R R+   +R+    V Q++ G  HTV +T  G 
Sbjct: 199 AGALYTFGERDSGKLGL----TTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGS 254

Query: 337 ------------------------RLFGFGDNERAQLGHDTL 354
                                   RLF FG  +  QLGH T 
Sbjct: 255 TRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTF 296


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 22/355 (6%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFV 65
           R+   L ++ + +S G ++ G LG   +TT       +     A      ++ + H   +
Sbjct: 358 RHSVALGADGTAWSWGDNVFGQLG---DTTFQPRMAPVQVTGLALGRADATSGQLHTVML 414

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
             +G+++  GDN+    G+  T +    P  V  L G+    V++G   T  L + G V 
Sbjct: 415 GANGRLWAWGDNNQGQLGN-GTQQNSSLPLPVN-LTGI--TSVSSGHRHTAALRLDGTVW 470

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           + G+N +GQLG G   DR TP  +  L  V S   IA G  + LA+  NG V+ +G    
Sbjct: 471 SWGTNQYGQLGDGTRTDRSTPVQVPGLTGVTS---IATGDYHSLALRSNGTVWGWGFNRY 527

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
             LG G   D  QP  +        ++V ++AG  H +AL S G V+ +G  + G LG+G
Sbjct: 528 GQLGDGTTVDRTQPVQVSGL----TNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNG 583

Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
                 LP     L +   V + A K  +  L   G+V+ +G+   G LG    G +   
Sbjct: 584 TRTWTILPVQAVGLGN--VVSLAAGKMYSLALRADGTVWAWGYNASGQLGV---GTTQGS 638

Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             P  +  L A  ++ I+ G YH++ +   G ++ +G N   QLG+ T    L P
Sbjct: 639 AVPLQVSGLSA--ITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTP 691



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 158/365 (43%), Gaps = 25/365 (6%)

Query: 1   MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G+YH+L + S  +VF+ G +  G LG G  TTQ  +   +     A  V V+A +
Sbjct: 53  VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDG--TTQDKA-APVQVAGVASAVSVAAGD 109

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFL 118
            ++  + ++G V+  GDN+S   G   T  P  +PR V  L +GV    + +G      L
Sbjct: 110 QYSLALDENGDVWAWGDNASGQLGD-GTLTPRAQPRRVSGLTQGV---SLASGFAHAVAL 165

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N   QLG       P P    P+  +  +V + AG S  LA+  +G V+
Sbjct: 166 RADGTVWAWGDNRSNQLGSATLTRSPVP---IPVPGLSDIVAVVAGGSSSLALRADGTVW 222

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
           ++G      LG G       P  +         V  +SAG  H +AL + G  + WG   
Sbjct: 223 AWGDNRYGQLGDGTTVRRAAPVRVANLD----AVTHISAGAYHALALRADGTAWAWGYNA 278

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LG G  + +TLP  +   ++     V A    +  +   G+V+ +G   +  LG  +
Sbjct: 279 FGQLGDGTTVQRTLPVLIGLTETR---TVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGN 335

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
              S   L   +   +       +  G  H+V +   G  + +GDN   QLG  T +  +
Sbjct: 336 LTSSAVPLHAGMTGGV------TLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRM 389

Query: 359 EPTEI 363
            P ++
Sbjct: 390 APVQV 394



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 158/362 (43%), Gaps = 22/362 (6%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G YH+L + ++ +V++ G +    LG G  T+  V             V + A   H
Sbjct: 304 VVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPL----HAGMTGGVTLVAGFRH 359

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +   G  ++ GDN     G   T +P   P  V  L  +     T+G   T  L   
Sbjct: 360 SVALGADGTAWSWGDNVFGQLGDT-TFQPRMAPVQVTGLA-LGRADATSGQLHTVMLGAN 417

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G +   G N  GQLG+G   +   P    P+   G +  +++G  +  A+  +G V+S+G
Sbjct: 418 GRLWAWGDNNQGQLGNGTQQNSSLPL---PVNLTG-ITSVSSGHRHTAALRLDGTVWSWG 473

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           +     LG G + D   P  +         V  ++ GD H +AL S+G V+ WG    G 
Sbjct: 474 TNQYGQLGDGTRTDRSTPVQVPGL----TGVTSIATGDYHSLALRSNGTVWGWGFNRYGQ 529

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G  +D+T P  +S L +   V + A    +  L   G+V+ FG+   G LG    G 
Sbjct: 530 LGDGTTVDRTQPVQVSGLTN--IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLG---NGT 584

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
               + P  + ++   +V  ++ G  +++ +   G ++ +G N   QLG  T +G   P 
Sbjct: 585 RTWTILP--VQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPL 642

Query: 362 EI 363
           ++
Sbjct: 643 QV 644



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 20/299 (6%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +++G  HT  +  + +V+S G++  G LG G  T +    T +  P    V  ++  + H
Sbjct: 453 VSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRS---TPVQVPGLTGVTSIATGDYH 509

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
           +  +  +G V+  G N     G   T   + R + V+         + AG   +  L   
Sbjct: 510 SLALRSNGTVWGWGFNRYGQLGDGTT---VDRTQPVQVSGLTNIVSIAAGGGHSLALRSD 566

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYS 179
           G V   G N  GQLG+G         +I P++ VG  +VV +AAG  Y LA+  +G V++
Sbjct: 567 GTVWAFGYNFDGQLGNG-----TRTWTILPVQAVGLGNVVSLAAGKMYSLALRADGTVWA 621

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G  ++  LG G       P  +         +  ++AG  H +AL S G+V+ WG  + 
Sbjct: 622 WGYNASGQLGVGTTQGSAVPLQVSGLS----AITSITAGTYHSLALRSDGWVWAWGFNFE 677

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
           G LG+G   ++  P  + S+ +  A  + A    +  +   G+++ +G    G LG  D
Sbjct: 678 GQLGNGTSDNRLTPGLVVSMSN--ATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGD 734



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 18/260 (6%)

Query: 3   ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASE 59
           I TG YH+L L SN +V+  G +  G LG G   + TQ V  + +      ++V ++A  
Sbjct: 503 IATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLT-----NIVSIAAGG 557

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H+  +   G V+  G N     G+      I     V+A+       + AG  ++  L 
Sbjct: 558 GHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILP---VQAVGLGNVVSLAAGKMYSLALR 614

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G V   G N  GQLG G T     P  ++ L    ++  I AG  + LA+  +G V++
Sbjct: 615 ADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLS---AITSITAGTYHSLALRSDGWVWA 671

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G      LG+G   + L P  + +      +   + AGD H +A+ + G ++ WG    
Sbjct: 672 WGFNFEGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWGLNSH 727

Query: 240 GALGHGDEIDKTLPEPLSSL 259
           G LG GD ++   P  +  L
Sbjct: 728 GQLGTGDTVEAWFPVQVQGL 747


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 10/282 (3%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C    AG N   + TI   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGNAG-NEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPR 66

Query: 148 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
            +  L +   + +   +GP  +LA T  G V+++G      LG+G  +  L P  + T  
Sbjct: 67  RLDSLSDKKIACLSYGSGPHIILATT-EGEVFTWGHNGYTQLGNGTTNHGLVPCQVST-N 124

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 265
                V+ V+ G  H + L S G VY WG    G +G G   ++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 184

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +  +  +VDTG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 FAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK 283



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 118/275 (42%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCSGCLGLG-DVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFT 98

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N     G+  TN  +   ++   L      +V  G   +  LT  G V+  G N  G
Sbjct: 99  WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSG 158

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++  P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P+   K   + +  C     +      G VY +G
Sbjct: 277 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 117
           N   +   + ++F  G N S C G  D  +    PR +++L  K + C    +G +    
Sbjct: 32  NEVLYTTINDEIFVLGTNCSGCLGLGDV-QSTLEPRRLDSLSDKKIACLSYGSGPHII-L 89

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  ++       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           Y++G  ++  +G G   ++  PR +    +  + VV ++ G    VA+  +G VY WG  
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQMCSVAVVDTGEVYVWGYN 208

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|296445910|ref|ZP_06887861.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256578|gb|EFH03654.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 484

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 151/363 (41%), Gaps = 18/363 (4%)

Query: 6   GRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G YHT ++  +S   C G +  G LG G  T +          S   V+ + A  +H   
Sbjct: 87  GSYHTCVLGAASDVQCWGDNSYGQLGDGTITDRYSPVAVSGLSSG--VLAIVAGAHHTCA 144

Query: 65  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 124
           +  +G V   G N     G   T      P  V+ L          GL+ T  LTI G V
Sbjct: 145 LTAAGAVACWGPNYFGMLGD-GTGVQRLTPVAVQGLSSGVVAIAAGGLH-TCALTIAGAV 202

Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
              GSN  GQLG G  LDR  P ++  L     VV IAAG  +  A+T  G V  +GS  
Sbjct: 203 KCWGSNAKGQLGDGTKLDRYVPVAVQGLSS--GVVAIAAGAEHSCALTSVGAVKCWGSNE 260

Query: 185 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              +G G     L    P A+    R    +V +SAG+ H  AL ++  V  WG    G 
Sbjct: 261 AGAVGDGTSGYHLYRLVPVAVSGLSRD---IVAISAGNNHTCALTAARAVKCWGLNTYGE 317

Query: 242 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
           LG G    + +P P+S L S  +A+   A  +    L   G V  +G   FG LG  D  
Sbjct: 318 LGDGTTTSRNIPVPVSGLSSGVVAISTGATSQFNCALKGGGGVLCWGRNHFGELG--DLS 375

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
           V+D+     +    R   V  I+ G +HT +    G +  +G N   QLG  T+     P
Sbjct: 376 VTDRSTPVAVAGHTR--DVDAIALGKFHTCISIGSGIVRCWGRNNAGQLGDGTIANRRSP 433

Query: 361 TEI 363
             +
Sbjct: 434 APV 436



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 5/139 (3%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
           ++ G  H   L ++  V  WG    G LG G   D+  P  +S L S + + + A    T
Sbjct: 84  LAGGSYHTCVLGAASDVQCWGDNSYGQLGDGTITDRYSPVAVSGLSSGV-LAIVAGAHHT 142

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L   G+V  +G   FG LG    G   + L P  +  L +  V+ I+ G  HT  +T 
Sbjct: 143 CALTAAGAVACWGPNYFGMLG---DGTGVQRLTPVAVQGLSSGVVA-IAAGGLHTCALTI 198

Query: 335 RGRLFGFGDNERAQLGHDT 353
            G +  +G N + QLG  T
Sbjct: 199 AGAVKCWGSNAKGQLGDGT 217


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 30/321 (9%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V  +S    HAA V + G+VF  G+ +S   G +  N  I  P+ VE+L+ V  + V   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAGPS 166
            + T  +T  G ++  G +       G T+++      T K    L    +V+ +A G  
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 225
           +   VT +G ++++GSG+   LGHG      +P+ +++ RR  + V+ VS G  H  A+ 
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAIV 463

Query: 226 -----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 274
                       S G ++TWG G  G LGH D   K +P  ++ L  H  ++V      T
Sbjct: 464 ETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLT 523

Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
             L  +G+VY  G    G LG P     DK +   +L +L    V  I++G +H  V+T 
Sbjct: 524 VALSISGTVYTMGSSIHGQLGCPR--AKDKSVNV-VLGNLTRQFVKDIASGSHHVAVLTS 580

Query: 335 RGRLFGFGDNERAQLGHDTLR 355
            G ++ +G     QLG   +R
Sbjct: 581 FGNVYTWGKGMNGQLGLGDVR 601



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 19/220 (8%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V+ V+    H A V  SGQ+FT G  +    GH  +   + +P+ VE+L+ +    V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGH-GSLESVTKPKEVESLRRMKVISVSCG 455

Query: 112 ----------LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 159
                      N   F   +  G + T G    G+LGH D+  +  P  +  L +    +
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID-HDFI 514

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
           +++ G +  +A++ +G VY+ GS  +  LG     D+     +    R+   V  +++G 
Sbjct: 515 KVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ--FVKDIASGS 572

Query: 220 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPL 256
            HV  L S G VYTWGKG  G LG GD  D+  P   EPL
Sbjct: 573 HHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL 612



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 14/215 (6%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-----ETTQCVSFTRINFPSAA---- 50
           + +  G +HT ++++S  +F+ GS   GVLGHG      +  +  S  R+   S +    
Sbjct: 398 LSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPW 457

Query: 51  HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 108
           H   +  + N   F      G++FT GD      GH D+ R +  P  V  L      +V
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVTELIDHDFIKV 516

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           + G   T  L+I G V+T GS+ HGQLG     D+     +  L     V  IA+G  ++
Sbjct: 517 SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTR-QFVKDIASGSHHV 575

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
             +T  G VY++G G N  LG G+  D   P  ++
Sbjct: 576 AVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 8/188 (4%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           +  +G+ +    G   Q+D L P+ +++       V  +S G +H   +   G V+ WG 
Sbjct: 261 IMIWGAITGLIDGSKNQNDALSPKLLESATM--FDVQSISLGAKHAALVTRQGEVFCWGN 318

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
           G  G LG    ID   P+ + SL+      V     +T  + ++G +Y +G  G    G 
Sbjct: 319 GNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GT 374

Query: 297 PDRGVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
            ++  S  + R +I D L  +  V  ++ G +HT +VT  G+LF +G      LGH +L 
Sbjct: 375 IEQSGSQFLTR-KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLE 433

Query: 356 GCLEPTEI 363
              +P E+
Sbjct: 434 SVTKPKEV 441



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
           V  I+ G  +   VT  G V+ +G+G++  LG     D   P+ +++   + + V  V+ 
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL--EDVAVRSVAC 351

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            D    A+  SG +Y WG         G + + + + + L    + L+V   A    T +
Sbjct: 352 SDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWH--TAI 409

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV---- 332
           +  +G ++ +G   FG LG    G  + V +P+ ++SLR   V  +S G +HT  +    
Sbjct: 410 VTSSGQLFTYGSGTFGVLG---HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETA 466

Query: 333 TDR--------GRLFGFGDNERAQLGHDTLRGCLEPT 361
            DR        G+LF +GD ++ +LGH   +  L PT
Sbjct: 467 NDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  105 bits (263), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 33/364 (9%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
            ++ G YH+ +I+ + S++  G +  G +G G  T      T+I      HVV VS  + +
Sbjct: 744  LSLGDYHSGVIAQDGSLYMWGVNDFGQIGDG-TTKNRYKPTKI----LDHVVSVSLGDYY 798

Query: 62   AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
            +  + Q G ++  G N     G   T       ++++ +  V     + G   +G +T  
Sbjct: 799  SGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAV-----SLGYCHSGAITQD 853

Query: 122  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
            G ++  GSN  GQ+G G T DR  P  I     +  V+ ++ G S+  A+T +G +Y +G
Sbjct: 854  GSLYMWGSNDSGQIGDGTTEDRYKPTKI-----LDHVIAVSLGVSHSGAITQDGSLYMWG 908

Query: 182  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            S S   +G G      +P  I        HV+ VS    +  A+   G +Y WG    G 
Sbjct: 909  SNSRGGIGDGTTEVRYKPTKILD------HVIAVSLQTGNSGAITQDGSLYMWGSNVYGE 962

Query: 242  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
            +G G E D+  P   + +  H+ + V      +  +   GS+Y +G   +G +G  D   
Sbjct: 963  IGDGTEEDRYKP---TKILDHV-IAVSLGDDHSGAITQDGSLYMWGRNYYGEIG--DGTE 1016

Query: 302  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
             D+    +ILD     HV  +S G+ H+  +T  G L+ +G N   Q+G  T +    PT
Sbjct: 1017 EDRYKPTKILD-----HVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPT 1071

Query: 362  EIFI 365
            +I I
Sbjct: 1072 QITI 1075



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 1    MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            + ++ G Y++  I+ + S++  GS++ G +G G  T      T+I      HV+ VS   
Sbjct: 790  VSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDG-TTEDRYKPTKI----LDHVIAVSLGY 844

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             H+  + Q G ++  G N S   G   T       ++++ +  V     + G++ +G +T
Sbjct: 845  CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKILDHVIAV-----SLGVSHSGAIT 899

Query: 120  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
              G ++  GSN+ G +G G T  R  P  I     +  V+ ++       A+T +G +Y 
Sbjct: 900  QDGSLYMWGSNSRGGIGDGTTEVRYKPTKI-----LDHVIAVSLQTGNSGAITQDGSLYM 954

Query: 180  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
            +GS     +G G + D  +P  I        HV+ VS GD+H  A+   G +Y WG+ Y 
Sbjct: 955  WGSNVYGEIGDGTEEDRYKPTKILD------HVIAVSLGDDHSGAITQDGSLYMWGRNYY 1008

Query: 240  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
            G +G G E D+  P   + +  H+ + V      +  +   GS+Y +GW   G +G
Sbjct: 1009 GEIGDGTEEDRYKP---TKILDHV-IAVSLGVGHSGAITQDGSLYMWGWNSDGQIG 1060



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 18/218 (8%)

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
           +I P   + S  Q+ +   Y   V   +G +Y +G      +G G   +  +P  I    
Sbjct: 730 TIRPDVGINSYSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKILD-- 787

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
               HVV VS GD +  A+   G +Y WG    G +G G   D+  P  +      +++ 
Sbjct: 788 ----HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAVSLG 843

Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
            C     +  +   GS+Y +G    G +G  D    D+    +ILD     HV  +S G+
Sbjct: 844 YC----HSGAITQDGSLYMWGSNDSGQIG--DGTTEDRYKPTKILD-----HVIAVSLGV 892

Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            H+  +T  G L+ +G N R  +G  T     +PT+I 
Sbjct: 893 SHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKIL 930


>gi|4885695|gb|AAD31939.1|AC007055_4 unknown [Homo sapiens]
          Length = 414

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 29  PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 88

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 89  HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 147

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 148 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 205

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 206 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 265

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 266 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 300



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 100 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 156

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 157 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 210

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 211 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 270

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 271 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 329

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 330 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 388

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 389 HTILIVE 395



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 6/162 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 36  KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 95

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 96  KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 154

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +S G  H VV+T    ++ +G  E  +LG D+      P ++
Sbjct: 155 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKV 196



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 129/331 (38%), Gaps = 20/331 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 69  GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 127

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 128 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 187

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 188 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 247

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 248 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 307

Query: 251 TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD----RGVSDKV 305
                L   L     ++V      T    D   ++ +G  G G L         G     
Sbjct: 308 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 367

Query: 306 LRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 335
             PR I  SL  HHV  +S   +HT+++ ++
Sbjct: 368 SWPRPIFGSL--HHVPDLSCRGWHTILIVEK 396



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 146/360 (40%), Gaps = 47/360 (13%)

Query: 28  VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-----GDNSSFCC 82
           V G G  T Q +   +    S     QV A   H A V    +++T      G       
Sbjct: 21  VWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQL 76

Query: 83  GHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 141
           GH D  +  +R P+ VE L+G   +QV+ G +FT  +T  G ++  GS+ +G +G    +
Sbjct: 77  GHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG----V 130

Query: 142 DRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
           D+   P+ + P++        V Q++ G ++++ +T N  VYS+G G    LG   + D 
Sbjct: 131 DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY 190

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD---------- 246
             P+ +     K + +V V  G +    L  SG V   G      LG             
Sbjct: 191 YTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEA 248

Query: 247 --EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
             E+  T    L+   S   ++  A  K  T  + + G +  FG    G LG    G   
Sbjct: 249 YHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV---GNYK 305

Query: 304 KVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
           K L   +L   L    V ++S G   T+  TD   +F +G+    +L        + PTE
Sbjct: 306 KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA-------MTPTE 358



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 281
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 11  VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 58

Query: 282 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 59  ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 118

Query: 340 GFGDNERAQLGHDTLRG--CLEPTEI 363
            FG +    +G D + G   LEP ++
Sbjct: 119 AFGSDYYGCMGVDKVAGPEVLEPMQL 144


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 16/285 (5%)

Query: 90  PIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           PIF    P+ V +++       +A  N   ++T    V   G N    LG GD      P
Sbjct: 8   PIFTLLSPQEVASIRKACVFGTSA--NEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVP 65

Query: 147 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           K +  L  +++ S+    +GP  +L+ T +GVVY++G      LG+G  +  + P  IQ 
Sbjct: 66  KKLEALCGKKIKSL-SYGSGPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAP--IQV 121

Query: 205 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 262
                I  VV V+ G  H +AL + G V+ WG   CG +G G   ++  P  +++ L   
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             V +   +  +  ++D G VYG+G+ G G LG  + G     L P  + +L +  V+QI
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQI 238

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             G  HT+ +TD G L+ +G N   QLG       L P  I +++
Sbjct: 239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 283



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 43  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 100

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 101 GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 158

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 159 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 218

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 219 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 275

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 276 NKNNLLSPAHIMVEK 290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 37  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLIPKKLEALCGKKIKSLSYGSGPHVL 95

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 96  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 155

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 156 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 211

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+ +++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 272 LG---TGNKNNLLSP 283



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 93  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 152

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 153 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 212

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 213 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 270

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 271 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 138 VEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 197

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 198 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALT 256

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 257 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 314

Query: 178 YSFG 181
           Y +G
Sbjct: 315 YMWG 318


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 10/296 (3%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAE-GSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 179
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 240 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGHDTL 354
             ++++ +P+I++SL    + ++  G   ++ +T  G++ F F   +R +    +L
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQVRFIFYKYQRLKKKKSSL 654



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 12/279 (4%)

Query: 9   HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV+ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFVIS 422

Query: 68  S-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGHVH 125
           S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G V 
Sbjct: 423 SDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVF 482

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
           + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G  
Sbjct: 483 SWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGH 244
             LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G LGH
Sbjct: 543 GRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGH 598

Query: 245 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
           GD      P+ + SL      +V    + +  L  TG V
Sbjct: 599 GDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 11/298 (3%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +S  + H A V  + +++  G N+    G   +   I +P  ++ALK    K    G N 
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
           T   T +G V+  G N  GQLG GDT DR T   I       ++ Q++AG +   A+T +
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTED 196

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++ +G  S   +G   + +   P  +      G  +  +S G  H   +   G +YT+
Sbjct: 197 GKLFMWGDNSEGQIGLKNKSNVCIPHEVTV----GKPISWISCGYYHSAFVTVDGELYTF 252

Query: 235 GKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           G+   G LG  ++  I+   P+ +  +   + +QV      T VL D   VY FG   FG
Sbjct: 253 GEPENGKLGLPNQLLINHRSPQRVLGIPEKV-IQVACGGGHTVVLTDK-VVYAFGLGQFG 310

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            LG        +   P++++ ++   +S IS G  HT ++TD G ++ FGD    +LG
Sbjct: 311 QLGLGT--FLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFGDGRHGKLG 366



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAA 63
           GR HTL+ ++  SV++ G +  G LG G +T    +F +I F +   ++ Q+SA  N +A
Sbjct: 133 GRNHTLVSTDKGSVYAAGGNNEGQLGLG-DTDDRDTFHQIGFFTPKDNIKQLSAGANTSA 191

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
            + + G++F  GDNS    G ++ +  +  P   E   G P   ++ G   + F+T+ G 
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLKNKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTVDGE 248

Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           ++T G   +G+LG  + L  +  +P+ +  + E   V+Q+A G  + + +T + VVY+FG
Sbjct: 249 LYTFGEPENGKLGLPNQLLINHRSPQRVLGIPE--KVIQVACGGGHTVVLT-DKVVYAFG 305

Query: 182 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
            G    LG G    +  +P+ I+  R K   +  +S G+ H   +   G +YT+G G  G
Sbjct: 306 LGQFGQLGLGTFLFETSEPKVIE--RIKDQKISYISCGENHTALMTDIGLMYTFGDGRHG 363

Query: 241 ALGHGDE 247
            LG G E
Sbjct: 364 KLGLGME 370



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 273
           +S GDEH   +  +  +Y +G    G LG G +   + P  + +LK   + +  C R   
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH- 136

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           T V  D GSVY  G    G LG  D    D+    +I       ++ Q+S G   +  +T
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGD--TDDRDTFHQIGFFTPKDNIKQLSAGANTSAALT 194

Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           + G+LF +GDN   Q+G         P E+ +
Sbjct: 195 EDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV 226


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLIPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 233
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 165
           Q+  G   +  LT  GHV+T G   +GQLGHG   D   PK +  L     ++  I  G 
Sbjct: 139 QIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGF 198

Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 224
               A+  +GVV+S+G    + LGH  Q D + QP+ +   + K   +++V+AG +H + 
Sbjct: 199 DQTFAINADGVVHSWGRQGPW-LGHAAQPDHVKQPQEVGLLKNKA-KIMQVAAGKQHTLL 256

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
           L   G VY+ GK   G LG G  + K    P P++SL +++  QV A ++ + VL   GS
Sbjct: 257 LTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGS 316

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
           V  FG    G LG  D    D    PR +  +       I+ G  HT+V+T
Sbjct: 317 VLTFGSGSNGRLGHGDTKNQD---VPRTVQGV-FDKACAIAAGFEHTIVLT 363



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 7/232 (3%)

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G  ++ G    G+LGHG   +   PK    LE  G V QI  G  + + +T  G VY+FG
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQ---LEVQGKVTQIGVGDQHSVLLTDGGHVYTFG 160

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
            G    LGHG + D  +P+ ++   R    +  +  G +   A+++ G V++WG+     
Sbjct: 161 QGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGR-QGPW 219

Query: 242 LGHGDEIDKT-LPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 299
           LGH  + D    P+ +  LK+   + QV A K+ T +L   G VY  G    G LG   +
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLG-QGK 278

Query: 300 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
            V  +   P  + SL  + ++Q++ G  H+VV+   G +  FG     +LGH
Sbjct: 279 TVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 12/249 (4%)

Query: 10  TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 69
           T  + + + +S G    G LGHG    +              V Q+   + H+  +   G
Sbjct: 98  TTAVEDGTAYSFGQGEWGKLGHGGAANEQHP---KQLEVQGKVTQIGVGDQHSVLLTDGG 154

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 127
            V+T G       GH  T + + RP+ VEAL        + G+ F     I   G VH+ 
Sbjct: 155 HVYTFGQGIYGQLGH-GTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSW 213

Query: 128 GSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
           G      LGH    D    P+ +  L+    ++Q+AAG  + L +T +G VYS G   + 
Sbjct: 214 GRQGP-WLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDG 272

Query: 187 CLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
           CLG G+  + +   P  I +     I   +V+AG++H V L S G V T+G G  G LGH
Sbjct: 273 CLGQGKTVKKETANPMPITSLNNYVI--TQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330

Query: 245 GDEIDKTLP 253
           GD  ++ +P
Sbjct: 331 GDTKNQDVP 339



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 26/237 (10%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           QI  G  H++L+++   V++ G  + G LGHG         TR +      V  +  ++ 
Sbjct: 139 QIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHG---------TRKDLDRPKRVEALVRAQQ 189

Query: 61  ---------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTA 110
                       F + +  V           GH      + +P+ V  LK      QV A
Sbjct: 190 TITSIGVGFDQTFAINADGVVHSWGRQGPWLGHAAQPDHVKQPQEVGLLKNKAKIMQVAA 249

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYM 168
           G   T  LTI G V++ G N  G LG G T+ + T  P  I  L     + Q+AAG  + 
Sbjct: 250 GKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNY-VITQVAAGEKHS 308

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
           + +  +G V +FGSGSN  LGHG+  ++  PR +Q    K      ++AG EH + L
Sbjct: 309 VVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFDK---ACAIAAGFEHTIVL 362



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           V SFG   N  LG+ E +D   PR++         ++ + AG    VA++S G  Y WG 
Sbjct: 7   VVSFGLNFNGQLGY-ECYDNKNPRSVNAPS----DLISLHAGWNCSVAVNSEGTPYFWGT 61

Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR---KTFVLVDTGSVYGFGWMGFGS 293
                 G    ++   P PL ++   +  ++  R+     T   V+ G+ Y FG   +G 
Sbjct: 62  MPSKYDGKAKFLE---PSPLPAIS--IGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGK 116

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG    G +     P+ L+      V+QI  G  H+V++TD G ++ FG     QLGH T
Sbjct: 117 LG---HGGAANEQHPKQLEV--QGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGT 171

Query: 354 LRGCLEPTEI 363
            +    P  +
Sbjct: 172 RKDLDRPKRV 181



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPSAAHVVQV 55
           MQ+  G+ HTLL++ +  V+S G +  G LG G     ET   +  T +N      + QV
Sbjct: 245 MQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLN---NYVITQV 301

Query: 56  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNF 114
           +A E H+  +   G V T G  S+   GH DT N+ +  PR V+ +    C  + AG   
Sbjct: 302 AAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDV--PRTVQGVFDKACA-IAAGFEH 358

Query: 115 TGFLT 119
           T  LT
Sbjct: 359 TIVLT 363


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 13/301 (4%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           VV +S  + H+A V  +G+++T G N     GH +T +   +P +V+ LK      V  G
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNT-KSYTKPSVVKKLKPEKVYMVACG 95

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            N T   T  GH+++ G    GQLGHGD  D   PK I  L +V     +A G  +  A+
Sbjct: 96  RNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGL-DVQKYKHLACGSDFSAAI 154

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
           T NG +Y++GS      G GE  D   P  +    +    V  VS G  H+  +   G +
Sbjct: 155 TENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGK----VRMVSCGYYHMAVVTEDGSL 208

Query: 232 YTWGKGYCGALG-HGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
           Y  G+   G LG   +++D T   + + S++  + V  C  +  T V+   GSVY FG  
Sbjct: 209 YMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEF-TAVVTKNGSVYTFGQG 267

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G LG     +  +   P  +          +S G   T V+T  G L+ FGD    +L
Sbjct: 268 NQGQLGLGSSMMETEF--PERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKL 325

Query: 350 G 350
           G
Sbjct: 326 G 326



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)

Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
           +VV ++ G  +   VT NG +Y+FG      LGHG      +P  ++  + + +++  V+
Sbjct: 36  AVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYM--VA 93

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
            G  H +A   SG++Y++G G  G LGHGD  D  +P+ +  L       +      +  
Sbjct: 94  CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDR 335
           + + G +Y +G  G G  G  +           I   L  H  V  +S G YH  VVT+ 
Sbjct: 154 ITENGELYTWGSCGEGQNGLGE--------DTEIPTRLHLHGKVRMVSCGYYHMAVVTED 205

Query: 336 GRLFGFGDNERAQLGHD 352
           G L+  G+ E  +LG D
Sbjct: 206 GSLYMCGEKEGGKLGLD 222



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 9/174 (5%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G     D L  +    F  +   VV +S GDEH   + ++G +YT+G    G 
Sbjct: 11  SGAVFTFGKTRFADNLANK----FWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQ 66

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LGHG+    T P  +  LK      V   +  T    ++G +Y FG  G G LG  D   
Sbjct: 67  LGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD--- 123

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDT 353
           ++    P+I++ L       ++ G   +  +T+ G L+ +G     Q  LG DT
Sbjct: 124 AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 54/297 (18%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + ++ G  H+ +++ N  +++ G +  G LGHG  T      + +       V  V+   
Sbjct: 38  VNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG-NTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
           NH     +SG +++ G       GH D       P+++E L     K +  G +F+  +T
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQLGHGDAEDS-HVPKIIEGLDVQKYKHLACGSDFSAAIT 155

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTP--------------------------------- 146
             G ++T GS   GQ G G+  + PT                                  
Sbjct: 156 ENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEKE 215

Query: 147 -----------KSIAPLEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
                       + + L+++ S    VV  A G  +   VT NG VY+FG G+   LG G
Sbjct: 216 GGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLG 275

Query: 192 EQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
               E + P  I  F +  +    VS G+     +   G +YT+G G  G LG GDE
Sbjct: 276 SSMMETEFPERIPLFEK--VKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDE 330



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVSASENHAA 63
           +   +  N  +++ GS   G  G G +T           P+  H    V  VS    H A
Sbjct: 150 FSAAITENGELYTWGSCGEGQNGLGEDT---------EIPTRLHLHGKVRMVSCGYYHMA 200

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIR 121
            V + G ++ CG+      G    +  +     ++ +K +  + V A  G  FT  +T  
Sbjct: 201 VVTEDGSLYMCGEKEGGKLGL--DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKN 258

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V+T G    GQLG G ++         PL E      ++ G S+   +T +G +Y+FG
Sbjct: 259 GSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFG 318

Query: 182 SGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVV 213
            G +  LG G++   +  +P  ++ F    + +V
Sbjct: 319 DGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMV 352



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 297 PDRGVSDKVLRPRILDSL------RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           P+ G      + R  D+L      R   V  +S G  H+ VVT  G+L+ FG N+  QLG
Sbjct: 9   PESGAVFTFGKTRFADNLANKFWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLG 68

Query: 351 HDTLRGCLEPTEI 363
           H   +   +P+ +
Sbjct: 69  HGNTKSYTKPSVV 81


>gi|222136641|ref|NP_149107.4| serine/threonine-protein kinase Nek9 [Homo sapiens]
 gi|116242675|sp|Q8TD19.2|NEK9_HUMAN RecName: Full=Serine/threonine-protein kinase Nek9; AltName:
           Full=Nercc1 kinase; AltName: Full=Never in mitosis
           A-related kinase 9; Short=NimA-related protein kinase 9;
           AltName: Full=NimA-related kinase 8; Short=Nek8
 gi|62740023|gb|AAH93881.1| NIMA (never in mitosis gene a)- related kinase 9 [Homo sapiens]
 gi|85567549|gb|AAI12102.1| NIMA related kinase 9 [Homo sapiens]
          Length = 979

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1086

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 61/414 (14%)

Query: 5   TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI---------NFPSAAHVVQV 55
           TG +   + S+ + ++ G +  G LG G       +  R+         + P+    VQV
Sbjct: 566 TGSFSLAVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQV 625

Query: 56  SASENHAAFVLQSGQVFTCGD------------NSSFCCGHRDTNRPIFRPRLVEALKGV 103
           SA   H+  V   G  +  G+            NS      RD   P    R ++A+   
Sbjct: 626 SAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDESRGLKAI--- 682

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP----KSIAPLEE-V 155
              QV+AG   +  L+  G+ +  G + +GQLG+   G +   P P       +P +E +
Sbjct: 683 ---QVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESM 739

Query: 156 G-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG------EQHDELQPR----AIQT 204
           G   +Q++AG  + LA+  NG VY++G  S   LG        + H     R    A  +
Sbjct: 740 GLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPS 799

Query: 205 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----------KTLP 253
               G+  +++SAG +H +A+ S GY Y WG    G LG+    D           +   
Sbjct: 800 ETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPA 859

Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRP-R 309
            P  + K   A QV A    +  +   G  YG+G+  +G LG     D  V   V  P  
Sbjct: 860 NPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVRDPAN 919

Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
             D+ +    +QIS+G +H++ V   G ++ +G+N   +LG  T  G L P  +
Sbjct: 920 PTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAPVSV 973



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 48/295 (16%)

Query: 1   MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHV-- 52
           +Q++ G +H+L +SN    ++ G    G LG+    +   S   I     + P+   +  
Sbjct: 682 IQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESMGL 741

Query: 53  --VQVSASENHAAFVLQSGQVFTCGDNS-----------------SFCCGHRDTNRPIFR 93
             +QVSA   H+  +  +G V+  G NS                 +F    RD   P   
Sbjct: 742 KTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANP--- 798

Query: 94  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----RPTPKSI 149
               E   G+   Q++AG + +  +   G+ +  G N  GQLG+    D     P P  +
Sbjct: 799 ---SETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHV 855

Query: 150 -APLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
             P     +       Q++AG  + LAV  +G  Y +G      LG+  + D   P  ++
Sbjct: 856 RDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVR 915

Query: 204 -----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
                T   KG+   ++S+G  H +A+ S GYVY WG    G LG G    K  P
Sbjct: 916 DPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAP 970


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 150/353 (42%), Gaps = 24/353 (6%)

Query: 18  VFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 72
           V+S G +  G LG G     P  T  +S +  +  +  +V  + A ++H+A + + G V+
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLS--DPLNRKNVRSIGAGKSHSAVIAEDGDVY 58

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
           T G       GH         P +V  ++      V  G N T  +T  G ++T G N  
Sbjct: 59  TWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKA 118

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 192
           GQLG GD     +P  I     + SV+ IA G  + +A+   G ++S+G      LGHG 
Sbjct: 119 GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGN 178

Query: 193 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 252
                 P  +    +K    +R + G +H + L  +  +Y WG    G LG  +  DK +
Sbjct: 179 TKTCYFPTQVVGMAKK--ICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGL-NRSDKAV 235

Query: 253 --PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 310
             P+ +  L+   A  V      +  L+    +Y +G    G LG    G       P +
Sbjct: 236 LQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGL---GHYTHSPVPEL 292

Query: 311 LDSLRAHHVSQISTGLYHTVV-VTDR--------GRLFGFGDNERAQLGHDTL 354
           + +LR+  V QI+ G  H V  V D           ++ +G  E  QLGH+ L
Sbjct: 293 VTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNEL 345



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVRVSAGDEHVVALDSSGYVY 232
           VYS+G      LG G  ++   P  I +      RK  +V  + AG  H   +   G VY
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRK--NVRSIGAGKSHSAVIAEDGDVY 58

Query: 233 TWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
           TWG+G+ G LGH D + +   EP  +  +++  +  V   +  T V+ D G +Y +G   
Sbjct: 59  TWGRGWEGQLGH-DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENK 117

Query: 291 FGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
            G LG  D   S+    P ++DS L    V  I+ G +HTV +   G ++ +G N+  QL
Sbjct: 118 AGQLGTGDLKSSNS---PVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQL 174

Query: 350 GHDTLRGCLEPTEIF 364
           GH   + C  PT++ 
Sbjct: 175 GHGNTKTCYFPTQVV 189



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 12/213 (5%)

Query: 1   MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           + I  G +HT+ I    +++S G + CG LGHG  T  C   T++   +    ++ +   
Sbjct: 145 LSIACGEFHTVAICIEGTIWSWGRNQCGQLGHG-NTKTCYFPTQVVGMAKKICIRAACGG 203

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
            H   +  + +++  G N+    G   +++ + +P +V+ L+      V  G + +  L 
Sbjct: 204 QHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM 263

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV--- 176
               ++T G N  GQLG G     P P+ +  L  V  V QIA G  + +A   + V   
Sbjct: 264 KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSV-RVQQIACGYDHCVAFVADEVEPG 322

Query: 177 ------VYSFGSGSNFCLGHGEQHDELQPRAIQ 203
                 VYS+G G    LGH E      PR ++
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 29/269 (10%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSAS 58
           +  GR HT++++ N  +++ G +  G LG G      +  +  + +N PS   V+ ++  
Sbjct: 94  VACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPS---VLSIACG 150

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           E H   +   G +++ G N     GH +T    F  ++V   K + C +   G   T  L
Sbjct: 151 EFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQHTLVL 209

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-----LEEVGSVVQIAAGPSYMLAVTG 173
           T    ++  GSN +GQLG    L+R     + P     L   G+   +  G S+ +A+  
Sbjct: 210 TDANKIYAWGSNAYGQLG----LNRSDKAVLQPDIVDHLRRSGAC-HVLCGYSHSMALMK 264

Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---- 229
           N  +Y++G      LG G       P  +   R   + V +++ G +H VA  +      
Sbjct: 265 NEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRS--VRVQQIACGYDHCVAFVADEVEPG 322

Query: 230 -----YVYTWGKGYCGALGHGDEIDKTLP 253
                +VY+WG+G  G LGH + + +  P
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTP 351


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 183 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 148 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 265
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 208

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 232

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|330837333|ref|YP_004411974.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749236|gb|AEC02592.1| hypothetical protein Spico_1388 [Sphaerochaeta coccoides DSM 17374]
          Length = 708

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 24/334 (7%)

Query: 55  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG----VPCKQVTA 110
           VSA   H   +  +G ++  GDN     G   T+      ++ +   G         V A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPS 166
           G N T  L   G +   G N  GQLG G T DR TP     S  P + +  V  ++AG  
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSAGNE 457

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           Y + +  +G +++ G   +  LG G+  +   P  + T       V  VSAG EH + L 
Sbjct: 458 YTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT------GVAAVSAGLEHTMILK 511

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
             G ++  G    G LG G+  +K+ P P+S + S +A +V A    T +L   G+++  
Sbjct: 512 KDGTLWATGWNSAGELGIGNNENKSTPVPVSFMGSDVA-EVSAGSSYTMILKKDGTLWAT 570

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRLFGF 341
           G+  +G LG    G       P  + +         +V+ +S G  +T+++   G L+  
Sbjct: 571 GFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGTLWAT 630

Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 375
           G N+  QLG D   G +      +Q M   TG+A
Sbjct: 631 GSNQYGQLG-DGTSGAVNNKSTPVQVM---TGVA 660



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 162/369 (43%), Gaps = 37/369 (10%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSA 57
           ++ G YHT+++ N+ ++++ G +  G LG G    + +     +    +     V  V+A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG-----VPCKQVTAG 111
            ENH   + + G ++  G N     G    T+R    P  V+A             V+AG
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRST--PVQVKASTDPNDFMTDVAAVSAG 455

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
             +T  L   G +   G N   QLG GD  +R TP     ++ +  V  ++AG  + + +
Sbjct: 456 NEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTP-----VQVMTGVAAVSAGLEHTMIL 510

Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
             +G +++ G  S   LG G   ++  P  +      G  V  VSAG  + + L   G +
Sbjct: 511 KKDGTLWATGWNSAGELGIGNNENKSTPVPVSFM---GSDVAEVSAGSSYTMILKKDGTL 567

Query: 232 YTWGKGYCGALG---HGDEIDKTLPEPLSS------LKSHLAVQVCARKRKTFVLVDTGS 282
           +  G  Y G LG    G   +K+ PE + +        +++A  V A    T +L   G+
Sbjct: 568 WATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAA-VSAGSSYTMILKKDGT 626

Query: 283 VYGFGWMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           ++  G   +G LG    G V++K    +++  + A     +S G  HT+++   G L+G 
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTGVAA-----VSAGWSHTMILKKDGTLWGT 681

Query: 342 GDNERAQLG 350
           G N   QLG
Sbjct: 682 GHNVFGQLG 690



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 15/254 (5%)

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE----VGSVV 159
           P + V+AG   T  L   G +   G N  GQLG G T DR  P  +    +    +  V 
Sbjct: 334 PYRAVSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVA 393

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG---IHVVRVS 216
            +AAG ++ + +  +G +++ G      LG G   D   P  ++           V  VS
Sbjct: 394 AVAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVS 453

Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
           AG+E+ + L   G ++  G      LG GD  +++ P  + +        V A    T +
Sbjct: 454 AGNEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT----GVAAVSAGLEHTMI 509

Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 336
           L   G+++  GW   G LG    G ++    P  + S     V+++S G  +T+++   G
Sbjct: 510 LKKDGTLWATGWNSAGELGI---GNNENKSTPVPV-SFMGSDVAEVSAGSSYTMILKKDG 565

Query: 337 RLFGFGDNERAQLG 350
            L+  G N   +LG
Sbjct: 566 TLWATGFNYYGELG 579



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 27/322 (8%)

Query: 3   ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQC--VSFTRINFPS--AAHVVQVSA 57
           +  G  HT+++  + ++++ G +  G LG G  T +   V       P+     V  VSA
Sbjct: 395 VAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSA 454

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
              +   + + G ++  G N S   G  D      R   V+ + GV    V+AGL  T  
Sbjct: 455 GNEYTMILKKDGTLWATGYNDSSQLGVGDNTN---RSTPVQVMTGVAA--VSAGLEHTMI 509

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 176
           L   G +   G N+ G+LG G+  ++ TP    P+  +GS V +++AG SY + +  +G 
Sbjct: 510 LKKDGTLWATGWNSAGELGIGNNENKSTP---VPVSFMGSDVAEVSAGSSYTMILKKDGT 566

Query: 177 VYSFGSGSNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +++ G      LG G       +    Q +A  T      +V  VSAG  + + L   G 
Sbjct: 567 LWATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGT 626

Query: 231 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           ++  G    G LG G      +K+ P  + +        V A    T +L   G+++G G
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTG----VAAVSAGWSHTMILKKDGTLWGTG 682

Query: 288 WMGFGSLGFPDRGVSDKVLRPR 309
              FG LG  D G +     P 
Sbjct: 683 HNVFGQLGLGDSGSASNRSTPE 704



 Score = 38.9 bits (89), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 19/162 (11%)

Query: 2   QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG----------PETTQCVSFTRINFPSAA 50
           +++ G  +T+++  + ++++ G +  G LG G          PE  +  S T  +F +  
Sbjct: 550 EVSAGSSYTMILKKDGTLWATGFNYYGELGLGTSGSGTNKSTPEQVKA-STTPDDFMT-- 606

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           +V  VSA  ++   + + G ++  G N     G   +     +   V+ + GV    V+A
Sbjct: 607 NVAAVSAGSSYTMILKKDGTLWATGSNQYGQLGDGTSGAVNNKSTPVQVMTGVAA--VSA 664

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI 149
           G + T  L   G +   G N  GQLG GD+    +R TP+ +
Sbjct: 665 GWSHTMILKKDGTLWGTGHNVFGQLGLGDSGSASNRSTPEQV 706


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 119/275 (43%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T ++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 242

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            ++  P  I     +GI + RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GNQPTPCRIAAL--QGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 254 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            P+   K  +  +  C     +      G VY +G
Sbjct: 301 APVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 7/253 (2%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 175
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATT-EG 118

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            V+++G  +   LG+G  +  L P  I T       V  V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWG 177

Query: 236 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
               G +G G   ++ +P  ++  L++ + V +   +  +  +V+TG VY +G+ G G L
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQL 237

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 354
           G    G      R   L  +R   + +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 238 GLGSSGNQPTPCRIAALQGIR---IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 355 RGCLEPTEIFIQE 367
                P  + +++
Sbjct: 295 SNQSYPAPVVVEK 307



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
           N   +   + ++F  G N   C G  D    I  PR ++AL G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDALSGKKIACLSYGSGPHIV-L 113

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 147/357 (41%), Gaps = 16/357 (4%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 72
           ++  +  + G +  G LG G  T        ++ P+   V  V+A   H   V  +G + 
Sbjct: 53  VAADTALAWGDNASGQLGDG-STADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTIL 111

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF----LTIRGHVHTCG 128
             GDNSS   G   T+      R      G+P       +         LT  G V   G
Sbjct: 112 AWGDNSSGQLGDGTTSN-----RHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWG 166

Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
           +NT GQLG G T+D P P  +  L    +   +AAG ++ LAVT  G V ++G  ++  L
Sbjct: 167 ANTIGQLGDGTTIDSPAPVDVN-LPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQL 225

Query: 189 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 248
           G G       P  +      G+    V+ GD H +A+ S+G V  WG    G LG G   
Sbjct: 226 GEGTTIPSRTPVVVS--LPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTA 283

Query: 249 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 308
           D++ P  +S         V A    +  L   G+V  +G    G LG  D   +D+   P
Sbjct: 284 DRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLG--DGTTADRS-TP 340

Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
             + S     V+ I+ G  H + VT  G    +G+N   QLG  T    + P  + +
Sbjct: 341 VTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSL 397



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 117/250 (46%), Gaps = 6/250 (2%)

Query: 9   HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H+L L S  +V + G++  G LG G  T    +   +N P       V+A   H+  V  
Sbjct: 152 HSLALTSAGTVLAWGANTIGQLGDG-TTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTS 210

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +G V   GDN+S   G   T  P   P +V    GV    V  G   +  +T  G V   
Sbjct: 211 AGTVLAWGDNASGQLGE-GTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAW 269

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GSN+ GQLG G T DR TP +++ L    +V  +AAG ++ LA++  G V ++GS S+  
Sbjct: 270 GSNSSGQLGDGTTADRSTPVAVS-LSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQ 328

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G   D   P  + +    G  V  ++ GD H +A+ S G    WG    G LG G  
Sbjct: 329 LGDGTTADRSTPVTVSS--PAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTN 386

Query: 248 IDKTLPEPLS 257
            D+  P  +S
Sbjct: 387 TDRVTPVAVS 396



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 5/168 (2%)

Query: 6   GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 64
           G  H+L ++++ +V + GS+  G LG G  T    +   ++      V  V+A    +  
Sbjct: 253 GDLHSLAVTSAGAVLAWGSNSSGQLGDG-TTADRSTPVAVSLSGGTTVTAVAAGIAFSLA 311

Query: 65  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           +  +G V   G NSS   G   T +R    P  V +  G     +  G      +T  G 
Sbjct: 312 LSSAGAVLAWGSNSSGQLGDGTTADR--STPVTVSSPAGTTVTAIAGGDAHGLAVTSVGA 369

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
               G+N+ GQLG G   DR TP +++      ++  IAAG ++ +AV
Sbjct: 370 AIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 233
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 353 TLRGCLEPTEIFIQE 367
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 225
           +A+  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
          Length = 537

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 150/341 (43%), Gaps = 36/341 (10%)

Query: 19  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 78
           ++ G +  G LGHG +  Q    T ++  S   +V+  A  NH   V   G+ F  G N 
Sbjct: 79  YTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFAFGWNK 137

Query: 79  SFCCGHRDTNRPIFRPRLVEALKGVPC------KQVTAGLNFTGFL--TIRGHVHTCGSN 130
               G   T +  F    VE+   VPC        +  G +FT +L  T    + T G  
Sbjct: 138 HGQLG-LGTAKNGFVSVEVESSP-VPCVVSDEVTSIACGADFTVWLSSTEGASILTAGLP 195

Query: 131 THGQLGHGDTLD--------------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
            +GQLGHG   +              +P PK+IA L    ++V++A G ++ +AV  NG 
Sbjct: 196 QYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGE-TIVKVACGANHTVAVDKNGF 254

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVYTW 234
           VY++G G    LGH EQ DE  PR I  F+R  +      VSAG  +       G +Y W
Sbjct: 255 VYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNVLPPNAIVSAGSANSACTAGGGQLYMW 314

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           GK       +GD  D   P+P+  L       + +     FV  D+ S   +G   +G L
Sbjct: 315 GK----IKNNGD--DWMYPKPMMDLSGWNLRWMDSGSMHHFVGADS-SCISWGHAQYGEL 367

Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
           G+   G       P+ +D L   HV  ++ G  H++V+ DR
Sbjct: 368 GYGPHGQKSSAA-PKKVDILEGMHVMGVACGFCHSMVIVDR 407



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
           H VALD  G  YTWG+   G LGHGD I +  P  +S L  +  V+  A +  T V+ D 
Sbjct: 68  HCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDE 127

Query: 281 GSVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--TDRG 336
           G  + FGW   G LG      G     +    +  + +  V+ I+ G   TV +  T+  
Sbjct: 128 GRSFAFGWNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTVWLSSTEGA 187

Query: 337 RLFGFGDNERAQLGHDT 353
            +   G  +  QLGH T
Sbjct: 188 SILTAGLPQYGQLGHGT 204



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
           G  Y +G    G LG  D    D   RP ++  L  + + +   G  HTVVV+D GR F 
Sbjct: 76  GRCYTWGRNEKGQLGHGDMIQRD---RPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFA 132

Query: 341 FGDNERAQLGHDTLRGCLEPTEI 363
           FG N+  QLG  T +      E+
Sbjct: 133 FGWNKHGQLGLGTAKNGFVSVEV 155


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  105 bits (261), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 160/379 (42%), Gaps = 22/379 (5%)

Query: 3    ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASEN 60
            ++ G  H  +I+ +  +F+ G++  G LGHG    +  S   R+       ++ +S    
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258

Query: 61   HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            H   + +S  +++ G+      GH   + P   P+ +E   G     +  G   T  L  
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGH-GVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRS 1317

Query: 121  RGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGN 174
             G +   GSN HGQLG  D    L  PT  + A +   G    V  I  G S+ +  T +
Sbjct: 1318 GGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSH 1377

Query: 175  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
            G VYSFG+ +   LGHG       P+ IQ    KG ++ R++ G  H V       VY W
Sbjct: 1378 GDVYSFGANAKGQLGHGSTESCRYPKLIQGL--KGKNIKRITCGPYHTVVTTDLDSVYCW 1435

Query: 235  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-------GSVYGFG 287
            G+G    LG G   ++ +P+ +    +    +V      T  L          G+VY  G
Sbjct: 1436 GQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICG 1495

Query: 288  WMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
                G LG    P     DK   P I+ S+ + +V  +++G     ++T  G L+ +G  
Sbjct: 1496 SSEHGKLGIGGDPRSPSLDKAY-PAIIPSINSANVVDLASGAEFNALITSNGALYMWGAG 1554

Query: 345  ERAQLGHDTLRGCLEPTEI 363
               Q+G+   +    PT +
Sbjct: 1555 THGQIGNGKNQDTWIPTRV 1573



 Score =  101 bits (251), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 91/318 (28%), Positives = 137/318 (43%), Gaps = 27/318 (8%)

Query: 51   HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVT 109
            H   VS    HAA +   G++FT G+N+S   GH     +    P  VE+LK  P   ++
Sbjct: 1195 HAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMS 1254

Query: 110  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 167
             G   T  +    H+++ G+  +GQLGHG +     PK I   EE     +  IA G  +
Sbjct: 1255 LGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRI---EEFAGQKISSIATGYWH 1311

Query: 168  MLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIH-------VVRVSAGD 219
             L +   G +++FGS  +  LG  + +H    P  + T     IH       V  +  G 
Sbjct: 1312 TLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNT---ADIHHAGQPTRVTGIFCGH 1368

Query: 220  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
             H V   S G VY++G    G LGHG       P+ +  LK     ++      T V  D
Sbjct: 1369 SHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTD 1428

Query: 280  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR---- 335
              SVY +G      LG    G +   L P++++      V ++  GLYHT  +T      
Sbjct: 1429 LDSVYCWGQGEHMCLG---TGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDS 1485

Query: 336  ---GRLFGFGDNERAQLG 350
               G ++  G +E  +LG
Sbjct: 1486 NTGGNVYICGSSEHGKLG 1503



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 19/277 (6%)

Query: 106  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAA 163
            K V+ G      +T+ G + T G+NT GQLGHG    +   TP  +  L++   ++ ++ 
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQT-PIMMMSL 1255

Query: 164  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
            G  + + +  +  +YS+G+G    LGHG       P+ I+ F   G  +  ++ G  H +
Sbjct: 1256 GGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEF--AGQKISSIATGYWHTL 1313

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQ------VCARKRKTF 275
             L S G ++ +G    G LG  D +   LP P  +++   H A Q      +      + 
Sbjct: 1314 VLRSGGDLFAFGSNEHGQLGLND-LKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSV 1372

Query: 276  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
            +    G VY FG    G LG    G ++    P+++  L+  ++ +I+ G YHTVV TD 
Sbjct: 1373 LRTSHGDVYSFGANAKGQLG---HGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDL 1429

Query: 336  GRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQEMEE 370
              ++ +G  E   LG  + +  L P   E+F+ +  E
Sbjct: 1430 DSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVE 1466



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 86/314 (27%), Positives = 134/314 (42%), Gaps = 23/314 (7%)

Query: 1    MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
            M ++ G  HT++I  S  ++S G+   G LGHG  T   +   RI   +   +  ++   
Sbjct: 1251 MMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLP-KRIEEFAGQKISSIATGY 1309

Query: 60   NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCK--QVTAGLN 113
             H   +   G +F  G N     G  D    +  P  V        G P +   +  G +
Sbjct: 1310 WHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHS 1369

Query: 114  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
             +   T  G V++ G+N  GQLGHG T     PK I  L+   ++ +I  GP + +  T 
Sbjct: 1370 HSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKG-KNIKRITCGPYHTVVTTD 1428

Query: 174  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-------D 226
               VY +G G + CLG G   +EL P+ ++ F  K   V RV  G  H   L       +
Sbjct: 1429 LDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNK--RVERVVCGLYHTATLTQPMGDSN 1486

Query: 227  SSGYVYTWGKGYCGALGHGDE-----IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
            + G VY  G    G LG G +     +DK  P  + S+ S   V + +      ++   G
Sbjct: 1487 TGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNG 1546

Query: 282  SVYGFGWMGFGSLG 295
            ++Y +G    G +G
Sbjct: 1547 ALYMWGAGTHGQIG 1560



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 31/299 (10%)

Query: 3    ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------V 55
            I TG +HTL++ S   +F+ GS+  G LG           TR+N     H  Q      +
Sbjct: 1305 IATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGI 1364

Query: 56   SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 115
                +H+      G V++ G N+    GH  T    + P+L++ LKG   K++T G   T
Sbjct: 1365 FCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRY-PKLIQGLKGKNIKRITCGPYHT 1423

Query: 116  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--- 172
               T    V+  G   H  LG G   +   PK +  L     V ++  G  +   +T   
Sbjct: 1424 VVTTDLDSVYCWGQGEHMCLGTGSNKNELVPK-LVELFVNKRVERVVCGLYHTATLTQPM 1482

Query: 173  ----GNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
                  G VY  GS  +  LG G        D+  P  I +      +VV +++G E   
Sbjct: 1483 GDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSI--NSANVVDLASGAEFNA 1540

Query: 224  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
             + S+G +Y WG G  G +G+G   D  +P  + SL S        + +  F++ ++GS
Sbjct: 1541 LITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV-SLSSE-------KNQNQFIVDESGS 1591



 Score = 38.9 bits (89), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 303  DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 362
            D ++ P         H   +S G  H  V+T  G LF +G+N   QLGH    G  + T 
Sbjct: 1180 DLLVHPMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTP 1239

Query: 363  IFIQEMEE 370
            + ++ +++
Sbjct: 1240 MRVESLKQ 1247


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 13/285 (4%)

Query: 87  TNRPIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLD 142
           T  PIF    P  +  ++ + C   +AG N    +T    V++ GSN  G LG G D + 
Sbjct: 6   TKWPIFSLLEPSFIATIR-MACVLGSAG-NEAIVITNDDEVYSLGSNCSGCLGLGSDAMS 63

Query: 143 RPTPKSIAPLEEVGSVVQIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 201
              P+ +  L +  ++V  A G   ++LA T  G VYS+G      LG+G  +    P  
Sbjct: 64  GLEPRKVEQLCK-KNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTP 122

Query: 202 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LK 260
           + T    G  +  ++ G  H +AL S G ++ WG+  CG +G G   ++  P  +++ + 
Sbjct: 123 V-TSSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIG 181

Query: 261 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 320
           S   + +   +  +    DTG V+G+G+ G G LG  +        R  +L+++    ++
Sbjct: 182 SKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNV---FIT 238

Query: 321 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           QI+ G  HT+ +TD G L+ +G N   QLG       + P  I +
Sbjct: 239 QIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAV 283



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 116
           N A  +    +V++ G N S C G          PR VE L    CK+      +     
Sbjct: 33  NEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQL----CKKNIVSFAYGSGPH 88

Query: 117 --FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
               T  G V++ G N + QLG+G T   PTP  +        +  IA G  + +A++  
Sbjct: 89  VLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSE 148

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G ++++G  +   +G G   ++  PR + T        + ++ G    +A   +G V+ W
Sbjct: 149 GEIFAWGQNNCGQVGSGTTSNQPTPRKV-TACIGSKKCISIACGQTSSIAAFDTGEVFGW 207

Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    G LG G+ I++  P  L  L +    Q+      T  L D GS+Y +G   +G L
Sbjct: 208 GYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQL 267

Query: 295 GFPDRGVSDKVLRPRI----LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
           G  ++      +R  +       + A H + +S  L      T  G++F +G 
Sbjct: 268 GTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAAL------TQAGKVFMWGQ 314



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 4/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           + G    ++ ++  V+S GS+  G LG G +    +   ++      ++V  +  S  H 
Sbjct: 30  SAGNEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSFAYGSGPHV 89

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
                +G+V++ G N     G+  TN+      +  +L G     +  G + +  L+  G
Sbjct: 90  LATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEG 149

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            +   G N  GQ+G G T ++PTP+ +         + IA G +  +A    G V+ +G 
Sbjct: 150 EIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDTGEVFGWGY 209

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   +  QP   +      + + +++ G  H + L   G +Y WG    G L
Sbjct: 210 NGNGQLGLGNNIN--QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQL 267

Query: 243 GHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   P  ++  L   + +        +  L   G V+ +G
Sbjct: 268 GTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWG 313


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 354 LRGCLEPTEIFIQE 367
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 225
           +A+  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNC----LHIKRVVGIACGQTSSMAV 196

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|19697884|gb|AAL87410.1| NIMA-family kinase NERCC1 [Homo sapiens]
          Length = 979

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYIWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|335292799|ref|XP_003356800.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sus scrofa]
          Length = 985

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 SNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  ++ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF S   V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFSNNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            +A G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFSNNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R V+ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 40/362 (11%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 67  QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 120
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 175
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK 499

Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 236 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 282
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGR 617

Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 342 GD 343
           G+
Sbjct: 675 GN 676



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTETPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           G+VY++G      LG+G  +  + P  I T       V  V+ G  H +AL   G VY W
Sbjct: 94  GIVYAWGHNGYSQLGNGTTNQGIAPIQICT-NLMIKQVTEVACGSHHSMALADDGEVYAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 354 LRGCLEPTEIFIQE 367
               L P +I +++
Sbjct: 270 KSNLLSPAQIMVEK 283



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 12/255 (4%)

Query: 58  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           S N A +V  S +VF  G N S C G  D N+    P+ +E L G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGVNCSNCLGTGD-NQSTIVPKKLELLSGKKIKSLSYGSGPHVL 88

Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
           L+   G V+  G N + QLG+G T     P  I     +  V ++A G  + +A+  +G 
Sbjct: 89  LSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGE 148

Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 294 LGFPDRGVSDKVLRP 308
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 5/272 (1%)

Query: 18  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFTCGD 76
           VF  G +    LG G   +  V   ++   S   +  +S  S  H     + G V+  G 
Sbjct: 43  VFVFGVNCSNCLGTGDNQSTIVP-KKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH 101

Query: 77  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 136
           N     G+  TN+ I   ++   L      +V  G + +  L   G V+  G N  GQ+G
Sbjct: 102 NGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVG 161

Query: 137 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
            G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG G   ++
Sbjct: 162 SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221

Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 256
           L P  +       + V+++  G  H +AL   G +Y WG    G LG G++ +   P  +
Sbjct: 222 LTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQI 279

Query: 257 SSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
              K  +  +  C     +      G VY +G
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           ++  G +H++ L  +  V++ G + CG +G G    Q       N      VV ++  + 
Sbjct: 132 EVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQT 191

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT 
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTD 250

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVY 178
            G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHVY 308

Query: 179 SFG 181
            +G
Sbjct: 309 MWG 311


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 154/349 (44%), Gaps = 38/349 (10%)

Query: 18  VFSCGSSLCGVLGHG----------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
             S G+   G LGHG          P ++    F  +   S   V  V+A   H+ F++ 
Sbjct: 27  ALSAGNGDHGRLGHGSPDEAHDGWSPRSSNY--FHPVEGVSDLDVRAVAAGGAHSVFLVA 84

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
            G VFTCG N+    GH     P F P  +     V    V AG   T  + + G V   
Sbjct: 85  GGHVFTCGLNADGQLGH-SAGLP-FSPEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAF 142

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           G NT GQLG G+ +D   P+ I  L +   V Q+A G  + LAV  +G VYS+GS ++  
Sbjct: 143 GKNTAGQLGTGN-VDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGV 201

Query: 188 LGHGEQ-----------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           LGHG +             EL PR +++   K   VV V+AG  H   +D  G +YTWG+
Sbjct: 202 LGHGSETWNDGWFYRTARAELAPRLVRSLEDK--KVVAVAAGHMHSACIDDRGNLYTWGQ 259

Query: 237 GYCGALGHGDEID--KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
           G    LG   +    +T P P+ SL+     ++      +    + G V  +G    G L
Sbjct: 260 GRFNQLGLSAKPSDHETTPSPVMSLR--FVHEIACGGLHSLANTNAG-VVSWGANQHGEL 316

Query: 295 GFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
           G      +   V +P  + S      S+++ G  H+  + + G+LF +G
Sbjct: 317 GHGHHSDIKSAVPKPIKMGS---RGWSKLAAGWKHSAGIAN-GKLFAWG 361



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 21/242 (8%)

Query: 126 TCGSNTHGQLGHG---DTLDRPTPKS---IAPLEEVGS--VVQIAAGPSYMLAVTGNGVV 177
           + G+  HG+LGHG   +  D  +P+S     P+E V    V  +AAG ++ + +   G V
Sbjct: 29  SAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAGGHV 88

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           ++ G  ++  LGH        P  +    R  + VV V+AG+ H + +D  G V+ +GK 
Sbjct: 89  FTCGLNADGQLGHSAGL-PFSPEPM--LVRLDVEVVSVAAGNGHTLCVDVDGCVWAFGKN 145

Query: 238 YCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
             G LG G+ +D T+P  + +L K     QV      +  + D G VY +G    G LG 
Sbjct: 146 TAGQLGTGN-VDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGVLGH 204

Query: 297 PDRGVSD--------KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
                +D          L PR++ SL    V  ++ G  H+  + DRG L+ +G     Q
Sbjct: 205 GSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQ 264

Query: 349 LG 350
           LG
Sbjct: 265 LG 266



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 43/356 (12%)

Query: 6   GRYHTLLISNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
           G +   L++   VF+CG +  G LGH  G   +      R++      VV V+A   H  
Sbjct: 76  GAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVRLDV----EVVSVAAGNGHTL 131

Query: 64  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTIRG 122
            V   G V+  G N++   G  + +  I  PR + AL K     QV  G   +  +   G
Sbjct: 132 CVDVDGCVWAFGKNTAGQLGTGNVDGTI--PRKIGALAKEARVAQVACGAEHSLAVADDG 189

Query: 123 HVHTCGSNTHGQLGHG-DTLD----------RPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
            V++ GS+T G LGHG +T +             P+ +  LE+   VV +AAG  +   +
Sbjct: 190 RVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDK-KVVAVAAGHMHSACI 248

Query: 172 TGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
              G +Y++G G  +   L       E  P  + + R     V  ++ G  H +A  ++G
Sbjct: 249 DDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLR----FVHEIACGGLHSLANTNAG 304

Query: 230 YVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
            V +WG    G LGHG   +I   +P+P+       +      K    +       +GFG
Sbjct: 305 -VVSWGANQHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIANGKLFAWGFG 363

Query: 288 WMGFGSLG-FPDRGVSD--KVLRPRILDSLRAHHVS------QISTGLYHTVVVTD 334
               GS+G + D  +S   ++      D    H VS       +S G  HT+ + D
Sbjct: 364 ----GSMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGEVKDVSCGFNHTLALVD 415



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 176 VVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSS 228
           +  S G+G +  LGHG   E HD   PR+   F        + V  V+AG  H V L + 
Sbjct: 26  IALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAG 85

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G+V+T G    G LGH   +  + PEP+        V V A    T  +   G V+ FG 
Sbjct: 86  GHVFTCGLNADGQLGHSAGLPFS-PEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAFGK 144

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
              G LG    G  D  +  +I    +   V+Q++ G  H++ V D GR++ +G +    
Sbjct: 145 NTAGQLG---TGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGV 201

Query: 349 LGH 351
           LGH
Sbjct: 202 LGH 204



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 2   QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---------- 50
           Q+  G  H+L +++   V+S GSS  GVLGHG ET     F R      A          
Sbjct: 174 QVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDK 233

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDN-------SSFCCGHRDTNRPIFRPRLVEALKGV 103
            VV V+A   H+A +   G ++T G         S+    H  T  P+   R V  +   
Sbjct: 234 KVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEI--- 290

Query: 104 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGS--VV 159
                  GL+          V + G+N HG+LGHG    +    PK I    ++GS    
Sbjct: 291 ----ACGGLH--SLANTNAGVVSWGANQHGELGHGHHSDIKSAVPKPI----KMGSRGWS 340

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFC------------LGHGEQHDELQPRAIQTFRR 207
           ++AAG  +   +  NG ++++G G +              LG G + D  +P  +     
Sbjct: 341 KLAAGWKHSAGIA-NGKLFAWGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGE 399

Query: 208 KGIHVVRVSAGDEHVVAL 225
               V  VS G  H +AL
Sbjct: 400 ----VKDVSCGFNHTLAL 413


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 15/302 (4%)

Query: 53  VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 110
           ++++  + H A + ++G++F  G N+      G + T   + +P  V+ALK    + V  
Sbjct: 39  LRIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVT---VNKPTCVKALKSEKVQLVAC 95

Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
           G N T   T +G V+  G N+ GQLG GD  +R + K +   +  G +  +AAG +   A
Sbjct: 96  GRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAA 155

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
           +T +G ++ +G  +   +G G++     P+ +      G  +  VS G  H   +   G 
Sbjct: 156 LTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSV----GQPISWVSCGYYHSALVTVDGA 211

Query: 231 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           +YT+G+   G LG G        +P+ + S+K  +  QV      T  L + G+VY FG 
Sbjct: 212 LYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEPVR-QVACGGGHTVALAE-GNVYTFGL 269

Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
             FG LG        +V  PR+++  +     Q+  G  HT V+T+ G L+ FGD    +
Sbjct: 270 GQFGQLGHGTFIFESRV--PRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGK 327

Query: 349 LG 350
           LG
Sbjct: 328 LG 329



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 16/251 (6%)

Query: 3   ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 60
           +  GR HTL+  +   V++ G +  G LG G +  +  SF R++F  S   +  ++A  N
Sbjct: 93  VACGRNHTLICTAKGKVYASGGNSEGQLGLG-DCEERTSFKRLDFFDSQGPIKMLAAGSN 151

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
            +A +  SG++F  GDN+    G    ++ +  P+ V    G P   V+ G   +  +T+
Sbjct: 152 TSAALTVSGKLFMWGDNTEGQIGLGKESQ-VSSPQEVSV--GQPISWVSCGYYHSALVTV 208

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G    G+LG G T   P    P+ +  ++E   V Q+A G  + +A+   G V
Sbjct: 209 DGALYTFGERDSGKLGLG-THQLPGHRVPQLVKSIKE--PVRQVACGGGHTVAL-AEGNV 264

Query: 178 YSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
           Y+FG G    LGHG    E + PR ++ F++      +V  G+ H   +   G +YT+G 
Sbjct: 265 YTFGLGQFGQLGHGTFIFESRVPRLVEHFKKG--RACQVVCGENHTAVITEDGLLYTFGD 322

Query: 237 GYCGALGHGDE 247
           G  G LG G+E
Sbjct: 323 GRHGKLGLGEE 333



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 7/248 (2%)

Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 166
           ++  G   T  +T  G +   GSN  GQLG G  +    P  +  L+    V  +A G +
Sbjct: 40  RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSE-KVQLVACGRN 98

Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
           + L  T  G VY+ G  S   LG G+  +    + +  F  +G  +  ++AG     AL 
Sbjct: 99  HTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQG-PIKMLAAGSNTSAALT 157

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
            SG ++ WG    G +G G E   + P+ +S +   ++   C       V VD G++Y F
Sbjct: 158 VSGKLFMWGDNTEGQIGLGKESQVSSPQEVS-VGQPISWVSCGYYHSALVTVD-GALYTF 215

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G    G LG     +    + P+++ S++   V Q++ G  HTV + + G ++ FG  + 
Sbjct: 216 GERDSGKLGLGTHQLPGHRV-PQLVKSIK-EPVRQVACGGGHTVALAE-GNVYTFGLGQF 272

Query: 347 AQLGHDTL 354
            QLGH T 
Sbjct: 273 GQLGHGTF 280



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           SG+ F  G  +  D +  +    F  K    +R++ GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFADNIPSK----FWLKNDIPLRIACGDEHTALITENGKLFMFGSNNWGQ 67

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G ++    P  + +LKS     V   +  T +    G VY  G    G LG  D   
Sbjct: 68  LGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEE 127

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
                R    DS     +  ++ G   +  +T  G+LF +GDN   Q+G         P 
Sbjct: 128 RTSFKRLDFFDS--QGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQ 185

Query: 362 EIFI 365
           E+ +
Sbjct: 186 EVSV 189


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 20/293 (6%)

Query: 70  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
           + +  G NSS       T + + +   V  +  +  + + AG   T  +   G +  CG 
Sbjct: 69  EAYAFGSNSSHQLAMGSTEK-LLKATPVPHMNNI--QSIIAGQYCTFMVLHNGSMKCCGK 125

Query: 130 NTHGQLGHGDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 186
            ++G+LG G +  + + K +    E   V S+        + LAV  NG VYS+G G   
Sbjct: 126 GSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYG 185

Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY-------- 238
            LGHG    +  P+ I     K I    VS G+ H  A+     ++TWG+G         
Sbjct: 186 KLGHGNNTTQKTPKLIAGLSNKVIR--SVSCGNRHSAAVTIDNELWTWGEGEHGRLGHGD 243

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
            G LGHGD   +  P+ + +LK  L  +V A  + +  L  TG +Y FG      LG PD
Sbjct: 244 TGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTKTGKLYSFGKGSGTGLGTPD 303

Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
              S     P+++ SL    +  ++TG  H + +T RG ++G+G N   Q G 
Sbjct: 304 TSYS----TPQLIQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMGQCGQ 352



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 19/256 (7%)

Query: 3   ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 58
           I  G+Y T ++  N S+  CG    G LG G    Q        FP    V  ++ S   
Sbjct: 104 IIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGS 163

Query: 59  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
           + H+  V ++G+V++ G+      GH + N     P+L+  L     + V+ G   +  +
Sbjct: 164 DGHSLAVDKNGKVYSWGEGEYGKLGHGN-NTTQKTPKLIAGLSNKVIRSVSCGNRHSAAV 222

Query: 119 TIRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEEVGSVVQ-IAAGPSYML 169
           TI   + T G   HG+LGHGDT          +  PK I  L+  G ++Q ++A   + +
Sbjct: 223 TIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALK--GQLIQKVSAANQFSI 280

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
           A+T  G +YSFG GS   LG  +      P+ IQ+     + ++ V+ GD H +AL   G
Sbjct: 281 ALTKTGKLYSFGKGSGTGLGTPDTSYS-TPQLIQSL--ADVIIIDVTTGDGHCLALTQRG 337

Query: 230 YVYTWGKGYCGALGHG 245
            VY WG    G  G G
Sbjct: 338 DVYGWGTNSMGQCGQG 353



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 14/221 (6%)

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V++ G   +G+LGHG+   + TPK IA L     +  ++ G  +  AVT +  ++++
Sbjct: 173 NGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSN-KVIRSVSCGNRHSAAVTIDNELWTW 231

Query: 181 GSGSNFCLGHGEQ--------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
           G G +  LGHG+           +++P+ I+    KG  + +VSA ++  +AL  +G +Y
Sbjct: 232 GEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEAL--KGQLIQKVSAANQFSIALTKTGKLY 289

Query: 233 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           ++GKG    LG  D    T P+ + SL   + + V         L   G VYG+G    G
Sbjct: 290 SFGKGSGTGLGTPDTSYST-PQLIQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMG 348

Query: 293 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
             G      ++ + +P  ++ L    V QIS G  H++V T
Sbjct: 349 QCGQGHN--NNSISKPGKVEGLDGVQVQQISAGTSHSIVWT 387



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 14/225 (6%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           H+L +  N  V+S G    G LGHG  TTQ      I   S   +  VS    H+A V  
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP-KLIAGLSNKVIRSVSCGNRHSAAVTI 224

Query: 68  SGQVFTCGDNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
             +++T G+      GH DT R          +P+++EALKG   ++V+A   F+  LT 
Sbjct: 225 DNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTK 284

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G +++ G  +   LG  DT    TP+ I  L +V  ++ +  G  + LA+T  G VY +
Sbjct: 285 TGKLYSFGKGSGTGLGTPDT-SYSTPQLIQSLADV-IIIDVTTGDGHCLALTQRGDVYGW 342

Query: 181 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 224
           G+ S    G G  ++ + +P  ++     G+ V ++SAG  H + 
Sbjct: 343 GTNSMGQCGQGHNNNSISKPGKVEGL--DGVQVQQISAGTSHSIV 385


>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
           variabilis]
          Length = 379

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 138/313 (44%), Gaps = 22/313 (7%)

Query: 39  VSFTRINFPSA--------AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNR 89
           +   R+  P+A        A VV+    ++     + + G V T G N+    GH     
Sbjct: 12  LGLERVQRPAAVGADNVIVAKVVEACLGDSRNTLAIGADGNVITWGWNARGTLGH-GHRE 70

Query: 90  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
           P  +P+ V  L+GV  KQ   G      L   G     G N +GQ    D  D   P  +
Sbjct: 71  PQGKPQRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILAP--V 128

Query: 150 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
             LE + +V Q+AAG  + LA+T  G ++ +G       G         PR I T     
Sbjct: 129 KCLEGI-AVKQVAAGGMHSLALTETGEIWMWGEP----WGDFSMTINRAPRRIDTTG--- 180

Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
              V VS G  H +AL+++G  +TWG    G LG+G     T PE +  L+      V A
Sbjct: 181 -DFVDVSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSA 239

Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
               +  +   G VY +G   +G LG  DR  S K LRP+ + +L  H V + S G  HT
Sbjct: 240 GGWHSMAISAEGEVYVWGRGEYGRLGLGDRTGSSK-LRPQKVKTLEGHRVVEGSCGGTHT 298

Query: 330 VVVTDRGRLFGFG 342
           +VVTD GR F +G
Sbjct: 299 MVVTDEGRCFIWG 311



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 22/290 (7%)

Query: 9   HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           +TL I ++ +V + G +  G LGHG    Q     R+      H+ Q +    H   +  
Sbjct: 43  NTLAIGADGNVITWGWNARGTLGHGHREPQGKP-QRVAGLQGVHIKQAAIGGWHVLALDD 101

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           +GQ +  G N    C  RD  R I  P  V+ L+G+  KQV AG   +  LT  G +   
Sbjct: 102 TGQCWAWGGNEYGQCLPRD-KRDILAP--VKCLEGIAVKQVAAGGMHSLALTETGEIWMW 158

Query: 128 GSNTHGQLGHGD---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
           G         GD   T++R  P+ I   +  G  V ++ G  + LA+   G  +++G   
Sbjct: 159 GEP------WGDFSMTINR-APRRI---DTTGDFVDVSCGAFHNLALNAAGECFTWGIND 208

Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
              LG+G       P  +     +G+ +  VSAG  H +A+ + G VY WG+G  G LG 
Sbjct: 209 FGMLGNGTTSYATCPEKVVGL--EGVFIADVSAGGWHSMAISAEGEVYVWGRGEYGRLGL 266

Query: 245 GDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 292
           GD     K  P+ + +L+ H  V+       T V+ D G  + +G   FG
Sbjct: 267 GDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTMVVTDEGRCFIWGRGAFG 316



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 32/239 (13%)

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLAVTGNGVVYSFGS 182
           V   G N  GQLG  + + RP     A    V  VV+   G S   LA+  +G V ++G 
Sbjct: 1   VFAWGVNEDGQLGL-ERVQRPAAVG-ADNVIVAKVVEACLGDSRNTLAIGADGNVITWGW 58

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
            +   LGHG +  + +P+ +     +G+H+ + + G  HV+ALD +G  + WG       
Sbjct: 59  NARGTLGHGHREPQGKPQRVAGL--QGVHIKQAAIGGWHVLALDDTGQCWAWG------- 109

Query: 243 GHGDEIDKTLPE-------PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G+E  + LP        P+  L+     QV A    +  L +TG +    WM     G
Sbjct: 110 --GNEYGQCLPRDKRDILAPVKCLEGIAVKQVAAGGMHSLALTETGEI----WM----WG 159

Query: 296 FPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
            P    S  + R PR +D+        +S G +H + +   G  F +G N+   LG+ T
Sbjct: 160 EPWGDFSMTINRAPRRIDT--TGDFVDVSCGAFHNLALNAAGECFTWGINDFGMLGNGT 216



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 33/289 (11%)

Query: 71  VFTCGDNSSFCCGHRDTNRP-------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
           VF  G N     G     RP       +   ++VEA  G     +  G +        G+
Sbjct: 1   VFAWGVNEDGQLGLERVQRPAAVGADNVIVAKVVEACLGDSRNTLAIGAD--------GN 52

Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
           V T G N  G LGHG    +  P+ +A L+ V  + Q A G  ++LA+   G  +++G G
Sbjct: 53  VITWGWNARGTLGHGHREPQGKPQRVAGLQGV-HIKQAAIGGWHVLALDDTGQCWAWG-G 110

Query: 184 SNF--CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
           + +  CL   ++ D L P  ++    +GI V +V+AG  H +AL  +G ++ WG+ +   
Sbjct: 111 NEYGQCLPR-DKRDILAP--VKCL--EGIAVKQVAAGGMHSLALTETGEIWMWGEPW--- 162

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
              GD        P     +   V V         L   G  + +G   FG LG    G 
Sbjct: 163 ---GDFSMTINRAPRRIDTTGDFVDVSCGAFHNLALNAAGECFTWGINDFGMLG---NGT 216

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
           +     P  +  L    ++ +S G +H++ ++  G ++ +G  E  +LG
Sbjct: 217 TSYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGEYGRLG 265



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 5/135 (3%)

Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC-ARKRKTFVLVDTGSVYGFGWM 289
           V+ WG    G LG  + + +       ++     V+ C    R T  +   G+V  +GW 
Sbjct: 1   VFAWGVNEDGQLGL-ERVQRPAAVGADNVIVAKVVEACLGDSRNTLAIGADGNVITWGWN 59

Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
             G+LG   R    K   P+ +  L+  H+ Q + G +H + + D G+ + +G NE  Q 
Sbjct: 60  ARGTLGHGHREPQGK---PQRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQC 116

Query: 350 GHDTLRGCLEPTEIF 364
                R  L P +  
Sbjct: 117 LPRDKRDILAPVKCL 131


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 15  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 74  CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 90  PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 148 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 265
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 213

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|301757823|ref|XP_002914748.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Ailuropoda
           melanoleuca]
 gi|281351442|gb|EFB27026.1| hypothetical protein PANDA_002683 [Ailuropoda melanoleuca]
          Length = 976

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGI-DKVAGSEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 38/306 (12%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
           Q++ G   T+ +++   +++ GS   G +G      ++ +   ++NF  +  V QVS  +
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSEVLEPMQLNFFLSNPVEQVSCGD 489

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 490 NHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 543

Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
           T  LT  G V  CG N   +LG          H    + P   S    +++    +  IA
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603

Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDE 220
            G ++  A+   G + +FG      LG G     L    I        G  V+RVS GDE
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSCGDE 660

Query: 221 HVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
             +A     +++ WG G  G L        HG +I  + P P+     H+    C R   
Sbjct: 661 FTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWH 719

Query: 274 TFVLVD 279
           T ++V+
Sbjct: 720 TILIVE 725



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G  +     +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGIDKVAGSEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|297695545|ref|XP_002824995.1| PREDICTED: serine/threonine-protein kinase Nek9 [Pongo abelii]
          Length = 979

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 149/360 (41%), Gaps = 17/360 (4%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G  HT  I+     SC G +    LG G  T Q          S A    ++A + H
Sbjct: 316 IAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRA--AAIAAGDGH 373

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI 120
              +   G V   G N S   G   T +    P  VE L  GV    +TAG + T  L+ 
Sbjct: 374 TCAMTTGGGVSCWGRNWSGQLGDGTTTQR-RTPMQVEGLSSGV--ADITAGDSHTCALST 430

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G+N  GQLG G T+ R TP  +  L     VV I AG S+  A++  G V  +
Sbjct: 431 EGGVTCWGNNESGQLGDGTTIQRSTPVQVEGLSS--GVVAITAGDSHTCALSTEGGVTCW 488

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   +  LG+G       P  ++        V+ ++AGD H  AL + G V  WG  + G
Sbjct: 489 GGNGSGQLGNGTTTQRSTPVQVEGLSSG---VMAITAGDSHTCALTTGGGVTCWGGNWYG 545

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    + +P  +  L S +A  + A    T  L   G V  +GW  +  LG   R 
Sbjct: 546 QLGDGTTTQRNMPVNVVGLSSGVAA-IAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRT 604

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
             +  ++   L S     V+ I+ G  HT  +   G +  +G N   QLG  T    + P
Sbjct: 605 NHNTPVQVEGLSS----GVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTP 660



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 151/346 (43%), Gaps = 14/346 (4%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           Y   L +NS+V   G++  G LG G  T Q  +   +N  S+  VV ++A   H   +  
Sbjct: 67  YTCALTTNSAVICWGNNEFGQLGDG-TTIQRNTPVAVNGLSSG-VVAIAAGYAHTCALTT 124

Query: 68  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
           SG V   G+N S   G+  T +     ++     GV    + AG   T  LT  G V   
Sbjct: 125 SGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSGV--AAIAAGEYHTCALTTDGAVTCW 182

Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
           GSN +GQLG G T  R TP  +A L     V  I AG S+  A+T  G V  +G   N  
Sbjct: 183 GSNGYGQLGDGTTTQRSTPVQVAGLSS--GVTAITAGGSHTCALTTGGAVTCWGRNGNGQ 240

Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
           LG G       P  +     +   V  ++AGD +  AL + G V  WG  + G LG G  
Sbjct: 241 LGDGTTTQRSTPVNVLGLSSE---VAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTT 297

Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
            +++ P  +  L S +   + A    T  +   G V  +G   +  LG    G + +   
Sbjct: 298 DERSTPVDVVGLSSGV-TAIAAGNDHTCAITTGGGVSCWGVNQYSQLG---DGTTTQQST 353

Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           P +++ L +   + I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 354 PVVVNGLSS-RAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGT 398



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 149/363 (41%), Gaps = 17/363 (4%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           I  G YHT  ++     +C GS+  G LG G  T +          S   V  ++A  +H
Sbjct: 163 IAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG--VTAITAGGSH 220

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI 120
              +   G V   G N +   G   T +   R   V  L        +TAG  +T  LT 
Sbjct: 221 TCALTTGGAVTCWGRNGNGQLGDGTTTQ---RSTPVNVLGLSSEVAAITAGDVYTCALTT 277

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G+N  GQLG G T +R TP  +  L     V  IAAG  +  A+T  G V  +
Sbjct: 278 GGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS--GVTAIAAGNDHTCAITTGGGVSCW 335

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G      LG G    +  P  +     +      ++AGD H  A+ + G V  WG+ + G
Sbjct: 336 GVNQYSQLGDGTTTQQSTPVVVNGLSSR---AAAIAAGDGHTCAMTTGGGVSCWGRNWSG 392

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    +  P  +  L S +A  + A    T  L   G V  +G    G LG    G
Sbjct: 393 QLGDGTTTQRRTPMQVEGLSSGVA-DITAGDSHTCALSTEGGVTCWGNNESGQLG---DG 448

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
            + +   P  ++ L +  V+ I+ G  HT  ++  G +  +G N   QLG+ T      P
Sbjct: 449 TTIQRSTPVQVEGLSSGVVA-ITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTP 507

Query: 361 TEI 363
            ++
Sbjct: 508 VQV 510



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 163/365 (44%), Gaps = 17/365 (4%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           IT G  HT  +S     +C G++  G LG G  T Q  +  ++   S+  VV ++A ++H
Sbjct: 418 ITAGDSHTCALSTEGGVTCWGNNESGQLGDG-TTIQRSTPVQVEGLSSG-VVAITAGDSH 475

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI 120
              +   G V   G N S   G+  T +    P  VE L  GV    +TAG + T  LT 
Sbjct: 476 TCALSTEGGVTCWGGNGSGQLGNGTTTQR-STPVQVEGLSSGV--MAITAGDSHTCALTT 532

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N +GQLG G T  R  P ++  L     V  IAAG S+  A++  G V  +
Sbjct: 533 GGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS--GVAAIAAGGSHTCALSTEGGVTCW 590

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G  +   LG G + +   P  ++        V  ++AG  H  AL +SG V  WG  + G
Sbjct: 591 GWNTYDQLGDGTRTNHNTPVQVEGLSSG---VAAIAAGYAHTCALITSGEVTCWGWNWYG 647

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
            LG G    +  P  ++ L S +A  V A    T  L   G V  +GW  +  LG    G
Sbjct: 648 QLGDGTTTQRMTPVVVNGLSSEVAAIV-AGYAHTCALSTGGGVTCWGWNKYYQLG---NG 703

Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
              +   P  +D L +  V+ ++ G  HT  ++  G +  +G +   QLG  T+     P
Sbjct: 704 TISQRSIPMDVDGLSS-GVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTP 762

Query: 361 TEIFI 365
            ++ +
Sbjct: 763 VDVTV 767



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 138/323 (42%), Gaps = 23/323 (7%)

Query: 42  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCC------GHRDTNRPIFR 93
           T +N+   A V++ + +       + +G  +TC    NS+  C      G       I R
Sbjct: 37  TNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQR 96

Query: 94  --PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
             P  V  L  GV    + AG   T  LT  G V   G+N  GQLG+G T+ R TP  +A
Sbjct: 97  NTPVAVNGLSSGV--VAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVA 154

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
            L     V  IAAG  +  A+T +G V  +GS     LG G       P  +        
Sbjct: 155 GLSS--GVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG-- 210

Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            V  ++AG  H  AL + G V  WG+   G LG G    ++ P  +  L S +A  + A 
Sbjct: 211 -VTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVAA-ITAG 268

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
              T  L   G V  +G    G LG    G +D+   P  +  L +  V+ I+ G  HT 
Sbjct: 269 DVYTCALTTGGGVTCWGANWSGQLG---DGTTDERSTPVDVVGLSS-GVTAIAAGNDHTC 324

Query: 331 VVTDRGRLFGFGDNERAQLGHDT 353
            +T  G +  +G N+ +QLG  T
Sbjct: 325 AITTGGGVSCWGVNQYSQLGDGT 347



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 143/352 (40%), Gaps = 15/352 (4%)

Query: 3   ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           IT G  HT  ++     +C G +  G LG G  T +      +   S   V  ++A + +
Sbjct: 214 ITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAITAGDVY 271

Query: 62  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
              +   G V   G N S   G   T+       +V    GV    + AG + T  +T  
Sbjct: 272 TCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGV--TAIAAGNDHTCAITTG 329

Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
           G V   G N + QLG G T  + TP  +  L        IAAG  +  A+T  G V  +G
Sbjct: 330 GGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSS--RAAAIAAGDGHTCAMTTGGGVSCWG 387

Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
              +  LG G       P  ++        V  ++AGD H  AL + G V  WG    G 
Sbjct: 388 RNWSGQLGDGTTTQRRTPMQVEGLSSG---VADITAGDSHTCALSTEGGVTCWGNNESGQ 444

Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
           LG G  I ++ P  +  L S + V + A    T  L   G V  +G  G G LG    G 
Sbjct: 445 LGDGTTIQRSTPVQVEGLSSGV-VAITAGDSHTCALSTEGGVTCWGGNGSGQLG---NGT 500

Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           + +   P  ++ L +  V  I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 501 TTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGT 551



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 108/267 (40%), Gaps = 12/267 (4%)

Query: 1   MQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           M IT G  HT  ++     +C G +  G LG G  T + +    +   S   V  ++A  
Sbjct: 518 MAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG--VAAIAAGG 575

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFL 118
           +H   +   G V   G N+    G   T      P  VE L  GV    + AG   T  L
Sbjct: 576 SHTCALSTEGGVTCWGWNTYDQLGD-GTRTNHNTPVQVEGLSSGV--AAIAAGYAHTCAL 632

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
              G V   G N +GQLG G T  R TP  +  L     V  I AG ++  A++  G V 
Sbjct: 633 ITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSS--EVAAIVAGYAHTCALSTGGGVT 690

Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
            +G    + LG+G       P  +         V  ++AGD H   L + G V  WG   
Sbjct: 691 CWGWNKYYQLGNGTISQRSIPMDVDGLSSG---VAALAAGDAHTCGLSTGGGVTCWGWDV 747

Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAV 265
            G LG G    +T P  ++ L  +L V
Sbjct: 748 YGQLGVGTIAYRTTPVDVTVLFVYLPV 774



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 5/168 (2%)

Query: 196 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 255
           EL    ++       H   ++AGD +  AL ++  V  WG    G LG G  I +  P  
Sbjct: 42  ELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVA 101

Query: 256 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 315
           ++ L S + V + A    T  L  +G V  +G    G LG    G++ +   P  +  L 
Sbjct: 102 VNGLSSGV-VAIAAGYAHTCALTTSGGVSCWGNNESGQLG---NGITIQRRTPVQVAGLS 157

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
           +  V+ I+ G YHT  +T  G +  +G N   QLG  T      P ++
Sbjct: 158 SG-VAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQV 204


>gi|388454036|ref|NP_001252560.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
 gi|387539926|gb|AFJ70590.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
          Length = 979

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 354 LRGCLEPTEIFIQE 367
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 225
           +A+  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196

Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|426377519|ref|XP_004055512.1| PREDICTED: serine/threonine-protein kinase Nek9 [Gorilla gorilla
           gorilla]
 gi|18997185|gb|AAL05428.1| NIMA-related kinase Nek8 [Homo sapiens]
 gi|119601626|gb|EAW81220.1| NIMA (never in mitosis gene a)- related kinase 9, isoform CRA_a
           [Homo sapiens]
 gi|119601628|gb|EAW81222.1| NIMA (never in mitosis gene a)- related kinase 9, isoform CRA_a
           [Homo sapiens]
 gi|208965282|dbj|BAG72655.1| NIMA (never in mitosis gene a)- related kinase 9 [synthetic
           construct]
          Length = 979

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 2   QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
           +I  G +HTL L  + S++S G +  G LG G    +    + +     + ++ +     
Sbjct: 41  KIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNK---HSPVQVKHLSSIIVIDGGAW 97

Query: 61  HAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
           H+  +   G V+  G N +   G   ++ +N PI + + +  +  + C     G      
Sbjct: 98  HSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPI-KTKELSGIIAISC-----GGQHNLA 151

Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
           L   G V   G N  GQLG GD  ++  P  I  L    ++V I+AG  + LA+  +G +
Sbjct: 152 LKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLN---NIVAISAGGYHSLAIKSDGSL 208

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
           +++GS +   LG G   +   P  +   R     ++ V+ G +  +AL S G +  WG  
Sbjct: 209 WAWGSNNMEQLGDGSATNRCSPVHVSNLR----DIIAVNGGGDFSLALKSDGTIMAWGSN 264

Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
               LG G   ++  P  +S ++    +++ A+   +  L   G V+ FG +G       
Sbjct: 265 GLSQLGDGTTTNRNTPVNVSDVRD--IIEIAAKGNHSLALTIEGKVWEFGSIGATP---T 319

Query: 298 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 357
           ++ V+    RP +++ +    V  I+ G +H VV+ + G L+ +G N   QLG  T+   
Sbjct: 320 EKEVTLPAYRPVLVNEIT--DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTVGSK 377

Query: 358 LEPTEI 363
            +P  I
Sbjct: 378 TKPVLI 383


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 354 LRGCLEPTEIFIQE 367
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 14/261 (5%)

Query: 52  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
           V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++ G
Sbjct: 26  VFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLSYG 82

Query: 112 LNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
                 L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A
Sbjct: 83  SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142

Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDS 227
           +  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLD 198

Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
           +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258

Query: 288 WMGFGSLGFPDRGVSDKVLRP 308
              +G LG    G  + +L P
Sbjct: 259 ANTYGQLG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 1   MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 178 YSFG 181
           Y +G
Sbjct: 308 YMWG 311


>gi|397507486|ref|XP_003824226.1| PREDICTED: serine/threonine-protein kinase Nek9 [Pan paniscus]
          Length = 979

 Score =  104 bits (260), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|380817902|gb|AFE80825.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
 gi|383422787|gb|AFH34607.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
          Length = 975

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 273 KTFVLVD 279
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 IGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|395827558|ref|XP_003786967.1| PREDICTED: serine/threonine-protein kinase Nek9 [Otolemur
           garnettii]
          Length = 975

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 94  PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQRLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)

Query: 2   QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 57  ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 159
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
            IA G ++  A+   G + +FG      LG G     L    I        G  V+RVS 
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657

Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
           GDE  +A     +++ WG G  G L        HG +I  + P P+     H+    C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716

Query: 271 KRKTFVLVD 279
              T ++V+
Sbjct: 717 GWHTILIVE 725



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 22  GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 82  CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
           DEL  R +   RR+ +              R S   E  +A+ +S    VY WG G    
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355

Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
                   K+ P+ L  +KS   A QVCA      V+     +Y +  M  G+      G
Sbjct: 356 --------KSTPQRLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407

Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
             DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +    +G D + G  
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467

Query: 357 CLEPTEI 363
            LEP ++
Sbjct: 468 VLEPMQL 474


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 24/304 (7%)

Query: 48  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
           S   VV V+     +  +L +G V+T G +     G+          R       VP   
Sbjct: 39  SQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKR-------VPIYN 91

Query: 108 VTAGLN-FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 164
           VT+  + F     ++  G V T G N +GQLG G T+D  TP  +  L   G+V  +A G
Sbjct: 92  VTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGL---GNVRAVAVG 148

Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
            S+MLA+  +G V+++G  +   LG G   D + P  +    R    +V +SAG  H +A
Sbjct: 149 ISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPR----IVAISAGYNHNLA 204

Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
           +D +G V+TWG   CG LG G  I    P+ +  L +  A  V      +  L D G+++
Sbjct: 205 IDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTA--VAGGSSFSLALKDDGTIW 262

Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
            +G    G LG    G +     P  +  L   +V +I+ G   +  +T+ G L+ +G N
Sbjct: 263 AWGSNVQGELGV---GTTKDCPLPVKVQGLT--NVIRIAAGGETSAAITNDGSLWVWGHN 317

Query: 345 ERAQ 348
           E+ +
Sbjct: 318 EQGK 321



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 35/262 (13%)

Query: 3   ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
           +  G  H L + N  +V++ G + CG LG G   T   S T +       +V +SA  NH
Sbjct: 145 VAVGISHMLALGNDGTVWAWGKNNCGQLGDG---TNVDSMTPVRVSGLPRIVAISAGYNH 201

Query: 62  AAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
              +  +G V+T G N    CG     TN     P+ V+ L  V    V  G +F+  L 
Sbjct: 202 NLAIDDAGNVWTWGLND---CGQLGDGTNISSPNPKKVKGLANVTA--VAGGSSFSLALK 256

Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
             G +   GSN  G+LG G T D P P  +  L    +V++IAAG     A+T +G ++ 
Sbjct: 257 DDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGLT---NVIRIAAGGETSAAITNDGSLWV 313

Query: 180 FGSGSNFCLGHGEQ-------HDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYV 231
           +        GH EQ        D   PR     R  G+  V+ V  G  +++AL++ G +
Sbjct: 314 W--------GHNEQGKYISGGEDASSPR-----RASGLSNVKLVDIGTINIIALENDGSL 360

Query: 232 YTWGKGYCGALGHGDEIDKTLP 253
           +  G    G LG G+  D+ +P
Sbjct: 361 WVVGDNQFGQLGTGNTYDRNMP 382



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 123/273 (45%), Gaps = 24/273 (8%)

Query: 99  ALKGVPCK-------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
           A+ GV C         V  G   +  L   G V T G + HG LG+    D+  PK + P
Sbjct: 30  AMAGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRV-P 88

Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
           +  V SV    A    + A+  +G V+++G      LG G   D   P  +      G+ 
Sbjct: 89  IYNVTSVDSCFAS---VAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMV-----GGLG 140

Query: 212 VVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
            VR V+ G  H++AL + G V+ WGK  CG LG G  +D   P  +S L   +A+   A 
Sbjct: 141 NVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPRIVAIS--AG 198

Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
                 + D G+V+ +G    G LG    G +     P+ +  L   +V+ ++ G   ++
Sbjct: 199 YNHNLAIDDAGNVWTWGLNDCGQLG---DGTNISSPNPKKVKGLA--NVTAVAGGSSFSL 253

Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
            + D G ++ +G N + +LG  T + C  P ++
Sbjct: 254 ALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKV 286



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 17/247 (6%)

Query: 51  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQV 108
           +V  V+   +H   +   G V+  G N+   CG     TN     P  V  L  +    +
Sbjct: 141 NVRAVAVGISHMLALGNDGTVWAWGKNN---CGQLGDGTNVDSMTPVRVSGLPRIVA--I 195

Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
           +AG N    +   G+V T G N  GQLG G  +  P PK +  L    +V  +A G S+ 
Sbjct: 196 SAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGLA---NVTAVAGGSSFS 252

Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
           LA+  +G ++++GS     LG G   D   P  +Q       +V+R++AG E   A+ + 
Sbjct: 253 LALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGL----TNVIRIAAGGETSAAITND 308

Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
           G ++ WG    G    G E D + P   S L +   V +         L + GS++  G 
Sbjct: 309 GSLWVWGHNEQGKYISGGE-DASSPRRASGLSNVKLVDI--GTINIIALENDGSLWVVGD 365

Query: 289 MGFGSLG 295
             FG LG
Sbjct: 366 NQFGQLG 372



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 8   YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
           +   L  + ++++ GS++ G LG G  T  C    ++      +V++++A    +A +  
Sbjct: 251 FSLALKDDGTIWAWGSNVQGELGVG-TTKDCPLPVKVQ--GLTNVIRIAAGGETSAAITN 307

Query: 68  SGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
            G ++  G N    +  G  D + P    R    L  V  K V  G      L   G + 
Sbjct: 308 DGSLWVWGHNEQGKYISGGEDASSP----RRASGLSNV--KLVDIGTINIIALENDGSLW 361

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 156
             G N  GQLG G+T DR  P  +A    VG
Sbjct: 362 VVGDNQFGQLGTGNTYDRNMPARVAIGSNVG 392


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 137/315 (43%), Gaps = 38/315 (12%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 356 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 414

Query: 121 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 177
            G ++T G  TH  G LGHG       PK I  PL+ +  V  +A GP +   +T  G  
Sbjct: 415 TGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGL-QVSFVACGPWHTALITSTG-- 471

Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 226
                          + +   PR + +    G+  + V+ G  H  A+            
Sbjct: 472 ---------------KENVSYPREVDSLL--GLRTIAVACGVWHTAAVVEVIATQSIASL 514

Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
           SSG ++TWG G    LGHGD+  +  P  + ++  +   ++      T  L  TG V+  
Sbjct: 515 SSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTM 574

Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
           G   +G LG P    SD  L   + D +    V +IS G YH  V+T +  ++ +G    
Sbjct: 575 GSTVYGQLGNPQ---SDGKLPCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGKGSN 631

Query: 347 AQLGHDTLRGCLEPT 361
            +LGH  L     PT
Sbjct: 632 GRLGHGDLEDRKTPT 646



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 124/319 (38%), Gaps = 67/319 (21%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 59
           R+ +L+     VF+ G    G LGHG       P   + ++ T ++F        V+  E
Sbjct: 355 RHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDF--------VACGE 406

Query: 60  NHAAFVLQSGQVFTCGD------------NSS------------------FCCGHRDT-- 87
            H+  V  +G+++T GD            N+S                    CG   T  
Sbjct: 407 FHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVSFVACGPWHTAL 466

Query: 88  -----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT-----------IRGHVHTCGSNT 131
                   +  PR V++L G+    V  G+  T  +              G + T G   
Sbjct: 467 ITSTGKENVSYPREVDSLLGLRTIAVACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGD 526

Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 191
             +LGHGD   R  P  +  + +     +IA G S  + +T  G V++ GS     LG+ 
Sbjct: 527 KNRLGHGDKESRLNPTCVPAIIDY-DFKKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNP 585

Query: 192 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 251
           +   +L          + +    +S G  HV  L S   VYTWGKG  G LGHGD  D+ 
Sbjct: 586 QSDGKLPCLVGDKIALESVE--EISCGAYHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRK 643

Query: 252 LPEPLSSLKS-HLAVQVCA 269
            P  + +LK  H+    CA
Sbjct: 644 TPTLVEALKDRHVKYIACA 662



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 50  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
           A VV+V A+++ A+  L SG++FT GD      GH D    +  P  V A+     K++ 
Sbjct: 500 AAVVEVIATQSIAS--LSSGKLFTWGDGDKNRLGHGDKESRL-NPTCVPAIIDYDFKKIA 556

Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 169
            G + T  LT  G V T GS  +GQLG+  + D   P  +     + SV +I+ G  ++ 
Sbjct: 557 CGHSLTVGLTTTGRVFTMGSTVYGQLGNPQS-DGKLPCLVGDKIALESVEEISCGAYHVA 615

Query: 170 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
            +T    VY++G GSN  LGHG+  D   P  ++  + +  HV  ++    +  A+
Sbjct: 616 VLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDR--HVKYIACASNYSAAI 669



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 44/230 (19%)

Query: 151 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 208
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   + +QPR ++     
Sbjct: 338 PLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTST 397

Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSH 262
            +  V  + G+ H  A+  +G +YTWG G    G LGHG      +P+    PL  L+  
Sbjct: 398 TVDFV--ACGEFHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVS 455

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
               V      T ++  TG                     + V  PR +DSL       +
Sbjct: 456 F---VACGPWHTALITSTG--------------------KENVSYPREVDSLLGLRTIAV 492

Query: 323 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 361
           + G++HT  V +            G+LF +GD ++ +LGH      L PT
Sbjct: 493 ACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPT 542


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 31/298 (10%)

Query: 91  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRK 208
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG    E+   +  ++I     K
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDK 138

Query: 209 GIHVVRVS----------------AGDEHV-----VALDSSGYVYTWGKGYCGALGHGDE 247
            I +                    A D H+     VA+ S+  V+ WG+   G LG G +
Sbjct: 139 NIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV-SASEVFCWGQNKYGQLGLGID 197

Query: 248 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
             K T P+ + SL     +QV A    +FVL  +G+++G+G   FG LG  D   +D+ +
Sbjct: 198 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV 255

Query: 307 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
            P +L SLR+  +  I  G  HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 256 -PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 312



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 137/318 (43%), Gaps = 39/318 (12%)

Query: 61  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 121 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYM------ 168
           +G V+  G ++ GQLG     + +  P      P+++   +    + A+  S++      
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSE 161

Query: 169 ------LAVTGNGVVYSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIHVV 213
                 LA +G   V    +   FC G  +            +  P+ I++    GI  +
Sbjct: 162 LAPDSHLAESGQVAV---SASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFM 216

Query: 214 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 273
           +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  
Sbjct: 217 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDH 276

Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVV 332
           T  L   G V+ FG  G+G LG      +   + PR +  L    V+QI+ G  HT   V
Sbjct: 277 TAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 333

Query: 333 TDRGRLFGFGDNERAQLG 350
              GR++ FG     QLG
Sbjct: 334 PSSGRIYSFGLGGNGQLG 351



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 33/315 (10%)

Query: 7   RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 67  QSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
             GQV+  G +S    G        R   + IF P + + ++   CK+  +  ++   L 
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMP-VDKNIRIKECKKTASRKSWVSTLC 159

Query: 120 IR-----------------GHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 161
                                V   G N +GQLG G D   + +P+ I  L  +   +Q+
Sbjct: 160 SELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQV 218

Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 221
           AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V +  G++H
Sbjct: 219 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKI--VYICCGEDH 276

Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 280
             AL   G V+T+G G  G LGH     +  P  +  L   +  Q+ C R+  +  +  +
Sbjct: 277 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 336

Query: 281 GSVYGFGWMGFGSLG 295
           G +Y FG  G G LG
Sbjct: 337 GRIYSFGLGGNGQLG 351



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 66  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
           + + +VF  G N     G     +    P+L+++L G+P  QV AG   +  LT+ G + 
Sbjct: 176 VSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
             G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T  G V++FG+G  
Sbjct: 236 GWGRNKFGQLGLNDENDRYVPYLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGY 294

Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGH 244
             LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  G LG 
Sbjct: 295 GQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 352

Query: 245 GDEIDKTLP 253
           G   ++  P
Sbjct: 353 GSTSNRKSP 361



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 5/193 (2%)

Query: 13  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 72
           +S S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F
Sbjct: 176 VSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 73  TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
             G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +
Sbjct: 236 GWGRNKFGQLGLNDENDR-YVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 294

Query: 133 GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGH 190
           GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG 
Sbjct: 295 GQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 352

Query: 191 GEQHDELQPRAIQ 203
           G   +   P  ++
Sbjct: 353 GSTSNRKSPFTVK 365



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 1   MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
           MQ+  G  H+ +++ S ++F  G +  G LG   E  + V +   +  S   +V +   E
Sbjct: 216 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQ-KIVYICCGE 274

Query: 60  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 118
           +H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G   T  F+
Sbjct: 275 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQHTSAFV 333

Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 149
              G +++ G   +GQLG G T +R +P ++
Sbjct: 334 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 364



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 286 FGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
           +G   FG LG    G+ ++ VL PR  D      V  +  GL HTV V D G ++  G N
Sbjct: 4   WGNASFGQLGL--GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61

Query: 345 ERAQLGHDTLR 355
           +  QLGH+  R
Sbjct: 62  DLGQLGHEKSR 72


>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
           africana]
          Length = 531

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 16/285 (5%)

Query: 90  PIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 146
           PIF    P+ + +++   C   T+G N   ++T    V   G N    LG GD      P
Sbjct: 8   PIFTLLSPQEIASIRKA-CVFGTSG-NEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVP 65

Query: 147 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 204
           K +  L  +++ S+    + P  +L+ T +GVVY++G      LG+G  +  + P  IQ 
Sbjct: 66  KKLEALCGKKIKSL-SYGSAPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGVAP--IQV 121

Query: 205 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 262
                I  VV V+ G  H +AL + G V+ WG   CG +G G   ++  P  +++ L   
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 263 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 322
             V +   +  +  ++D G VYG+G+ G G LG  + G     L P  + +L +  V+QI
Sbjct: 182 KVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQI 238

Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
             G  HT+ +TD G L+ +G N   QLG       L P  + +++
Sbjct: 239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLVEK 283



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 5/286 (1%)

Query: 4   TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
           T+G     +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSAPHV 87

Query: 63  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
               + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 243 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
           G G++ +   P  +   K  +  +  C     +     +G+VY +G
Sbjct: 266 GTGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWG 311


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.138    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,214,936,544
Number of Sequences: 23463169
Number of extensions: 271215429
Number of successful extensions: 645108
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3683
Number of HSP's successfully gapped in prelim test: 1665
Number of HSP's that attempted gapping in prelim test: 551139
Number of HSP's gapped (non-prelim): 31895
length of query: 375
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 231
effective length of database: 8,980,499,031
effective search space: 2074495276161
effective search space used: 2074495276161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)