BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017198
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)
Query: 3 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
I+ G H++ L+S V S G G LGHG + S T+++ +V V+ +H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 62 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
QSG +V++ G GH +++ +F P ++AL G+ KQ+ G + +T+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
G V + G N +GQLG GDT D P+ I E + + +AAG + AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
G G LG G++ D L P + + G + V+ G H +++ SG +YT+G G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254
Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
LGHGD D +P L +L + Q+ R T L G +YG+GW FG +G +
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
++ R D + V Q+S G HT+ VT+R +F +G QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)
Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 167
++AG + + L V + G GQLGHGD DRP+P ++ L+ +V + G +
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78
Query: 168 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
+A + +G+ VYS+G G LGHG D P I+ GI + +++ GD H +A+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136
Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
G V +WG+ G LG GD D +P+ + + + V A T + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 287 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 346
GW +G+LG DR +D+++ R+ S +S ++ G HT+ V+ G L+ +G ++
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253
Query: 347 AQLGHDTLRGCLEPTEI 363
QLGH L L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)
Query: 2 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
QI G H L ++ V S G + G LG G +T + +I + V+A
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H A V + G ++ G G D T+R + P V + G V G T ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
G ++T G + +GQLGHGD D P + L + QI+ G + +A+T +G +Y
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
+G +G G D+ P +Q VV+VS G H +A+ V+ WG+G
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Query: 240 GALGHGDEIDKTLPEPLSSL 259
G LG G+ +D+ P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
V+ +SAG H VAL S V +WG+G G LGHGD D+ P LS+L H V V
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76
Query: 272 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
T +G VY +GW FG LG G S + P + +L + QI+ G H +
Sbjct: 77 DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133
Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
VT G + +G N+ QLG L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 3 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 62 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 122 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
G ++ G N GQ+G G+ LD+ +P + + VVQ++ G + LAVT V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 182 SGSNFCLGHGEQHDELQPRAIQTFRRKG 209
G+N LG GE D P+ I+ G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
+ G HT+ +S S ++++ G S G LGHG + ++ S + + Q+S H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287
Query: 62 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
+ G+++ G N G + D P+ + R + K V QV+ G T +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 160
T R +V G T+GQLG G+++DR PK I L G+ Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 80 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
C G+ +P + P++ + K+V G N + FL G V+TCG N
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
T GQLGH ++P E++G+ ++ +A G S+ LA++ G ++S+G+GS+
Sbjct: 62 TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 186 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
LG D + PR IQ ++ I ++VS G+ H +AL + G +TWGK G LG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 245 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
G E + P+ + SL+ QV A +F L +G+V+G+G G LG D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
P + LR V IS G HT V+T G +F FG QLGHD++ + P +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Query: 364 F 364
Sbjct: 289 L 289
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)
Query: 46 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 104
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 163
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 222
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
V+ FG G LG ++D+V PR + L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 342 GDNERAQLG 350
G R QLG
Sbjct: 320 GCGARGQLG 328
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 6 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 66 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 126 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 185 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 244
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 245 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 303
D+ P + L Q+ C R+ + +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333
Query: 304 KVLRPRILDSLRAHHVSQIS 323
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 58
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 59 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 237
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 238 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 277
G LG G + P P+ K H+ Q+ + +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 91 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
L+ ++V +A G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)
Query: 43 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 102
R +F V V H FVL G V+TCG N GH + + +P V AL
Sbjct: 27 RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83
Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 161
V G T L +G V+ G ++ GQLG G P++I L ++ +VQ+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142
Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
A G + LA++ V+ +G LG G + + P+ I++ GI ++V+AG
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200
Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
H L SG ++ WG+ G LG DE D+ +P L SL+S V +C + T L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 339
G V+ FG G+G LG + + PR + L V+Q++ G HT V GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 340 GFGDNERAQLG 350
FG QLG
Sbjct: 318 SFGLGGNGQLG 328
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)
Query: 7 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
R+ ++ + +V++CG + G LGH + ++ A ++V V+ E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100
Query: 67 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
+ P + L + QV C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
+ G HTL +++ V++ G G LG G E +C+ R I S +VQV+
Sbjct: 89 VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + ++ +VF G N G + P+L+++L G+P QV AG + LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
+ G + G N GQLG D DR P + L +V I G + A+T G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
FG+G LGH E+ PR + F G V +V+ G +H A + SSG +Y++G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 239 CGALGHGDEIDKTLP 253
G LG G ++ P
Sbjct: 324 NGQLGTGSTSNRKSP 338
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 1 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q+ G YH+L +S +S VF G + G LG G + + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
G V T G+ +GQLGH T P+ + E +GS+V Q+A G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 91 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 209
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
I +V+V+ G H +AL + V+ WG+ G LG G E K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 22 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 80
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 81 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 139
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 140 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 198
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 258
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 259 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 318
L+S V +C + T L G V+ FG G+G LG + + PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295
Query: 319 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 7 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 67 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 127 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
+ P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTR-INFPSAAHVVQVSASE 59
++ G HTL +++ V++ G G LG G E +C+ R I S +VQV+
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGY 146
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + ++ +VF G N G + P+L+++L G+P QV AG + LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
+ G + G N GQLG D DR P + L +V I G + A+T G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
FG+G LGH E+ PR + F G V +++ G +H A + SSG +Y++G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 239 CGALGHGDEIDKTLP 253
G LG G ++ P
Sbjct: 324 NGQLGTGSTSNRKSP 338
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 1 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q+ G YH+L +S +S VF G + G LG G E + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
G V T G+ +GQLGH T P+ + E +GS+V QIA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)
Query: 48 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048
Query: 106 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEME 369
GDN+ Q G+ T +PT +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 70 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 130 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 248 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194
Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
+ +T G ++T G +G+LGH D+ D+ PK + L+ V+ IA +G + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 94 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089
Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208
Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
T+ G ++ +GDN+ QLG T P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502
Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
+ +G V++WG G G LG G P+ + L+ ++V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 345 ERAQLGHDTLR 355
++ Q DTLR
Sbjct: 738 DQCQ-HFDTLR 747
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 357 CLEPTEI 363
C P +I
Sbjct: 4187 CKVPMKI 4193
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
+ +G H L +S+ V+S G + G LGHG + C I VV V+A H
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4104
Query: 62 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
+A V +G ++T G GH D+ + +P+LVEAL+G + +G T LT
Sbjct: 4105 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
V + G +G+LG G + P I L +G VV++ G + +A+T +G VY+
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4222
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
+G G LGHG +PR +Q +G V+ ++ G H V G VYTWG
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 240 GALGHG 245
G LG G
Sbjct: 4281 GQLGDG 4286
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 6 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 66 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 244 HG 245
+G
Sbjct: 3292 NG 3293
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)
Query: 4 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 56
+ G ++ L + V+S G G LGHG P+ S + + HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558
Query: 57 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 116
++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617
Query: 117 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
L + G V + G +G+LG G + TPK I L+++ V+++ G + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676
Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 235 GKGYCGALGHGDEIDKTLPEP 255
G H D + T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 3 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 62 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 5 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
++ +G+ E +LGH C P I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 231 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
V+ WG LG G +I + E LS+L VQV + F + G VY G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 288 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 344
G LG G+S V PR + +L ++ V +++ +G H +T G++F +G+
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 345 ERAQLGHDTLRGCLEPTEI 363
+ +LGH + C +P I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)
Query: 48 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047
Query: 106 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 163
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 221
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164
Query: 222 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 342 GDNERAQLGHDTLRGCLEPTEIFIQEME 369
GDN+ Q G+ T +PT +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 70 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
+VF G N G ++ I P E L + QV G +T+ G V+ CG
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018
Query: 130 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 248 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193
Query: 306 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 170
+ +T G ++T G +G+LGH D+ D+ PK + L+ VV IA +G + L
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 94 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087
Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 211
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 271
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206
Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
T+ G ++ +GDN+ QLG T P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501
Query: 112 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 166
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 224
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 345 ERAQLGHDTLR 355
++ Q DTLR
Sbjct: 737 DQCQ-HFDTLR 746
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 122 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 299 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 356
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 357 CLEPTEI 363
C P +I
Sbjct: 4185 CKVPMKI 4191
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 118/246 (47%), Gaps = 8/246 (3%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
+ +G H L +S+ V+S G + G LGHG + C I VV V+A H
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAH 4102
Query: 62 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 119
+A V +G ++T G GH D+ + +P+LVEAL+G + +G T LT
Sbjct: 4103 SACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
V + G +G+LG G + P I L +G VV++ G + +A+T +G VY+
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4220
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 239
+G G LGHG +PR +Q +G V+ ++ G H V G VYTWG
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 240 GALGHG 245
G LG G
Sbjct: 4279 GQLGDG 4284
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 6 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 65
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 66 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 123
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 183
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 184 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 244 HG 245
+G
Sbjct: 3291 NG 3292
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)
Query: 4 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 60
+ G ++ L + V+S G G LGHG P V + HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
++A + G+++T G + GH + P LV LKG+ V G L +
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 121 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
G V + G +G+LG G + TPK I L+++ VV++ G + +A+T +G VY
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 679
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
S+G G N LGHG + P+ ++ +G V+ V+AG H +AL V++WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 736
Query: 239 CGALGHGDEIDKTLPEP 255
H D + T PEP
Sbjct: 737 -DQCQHFDTLRVTKPEP 752
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
V QIA L ++ NG VY+ S D L P+ +Q + I + +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 273
H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 331
+ + G +Y +G +G LG G S+ P ++ L+ V ++ +G T+
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619
Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
VT+ G+++ +GD + +LG GC P I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 3 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162
Query: 62 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 5 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Query: 124 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 5 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 63
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
VH+ GSN Q H DTL +P P ++ L + +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 337 RLFGFGDNERAQLGHDTLRGCLEPTEI 363
++ +G+ E +LGH C P I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 265
G + + +AG E + + V+ WG LG G +I + E LS+L V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 323
QV + F + G VY G G LG G+S V PR + +L ++ V +++
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 324 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
+G H +T G++F +G+ + +LGH + C +P I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 91 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 150
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 209
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136
Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 268
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ L SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 269 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 328
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 329 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 364
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
H FVL G V+TCG N GH + + +P V AL V+ G T L
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 121 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
+G V+ G ++ GQLG G P++I L ++ +VQ+A G + LA++ V+
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160
Query: 180 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
+G LG G + P+ +++ GI ++V+AG H L SG ++ WG+
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 298
G LG DE D+ +P L SL+S V +C + T L G V+ FG G+G LG
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275
Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 350
+ + PR + L V++I+ G HT V GR++ FG QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 7 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 66
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 67 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 126
GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 127 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 246 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
+ P + L + ++ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 9/255 (3%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSFTR-INFPSAAHVVQVSASE 59
++ G HTL +++ V++ G G LG G E +C+ R I S +VQV+
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGY 146
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + ++ +VF G N G + P+L+++L G+P QV AG + LT
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
+ G + G N GQLG D DR P + L +V I G + A+T G V++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFT 265
Query: 180 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 238
FG+G LGH E+ PR + F G V ++ G +H A + SSG +Y++G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 239 CGALGHGDEIDKTLP 253
G LG G ++ P
Sbjct: 324 NGQLGTGSTSNRKSP 338
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 1 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q+ G YH+L +S +S VF G + G LG G + + S + +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 177
G V T G+ +GQLGH T P+ + E +GS+V +IA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQ 203
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)
Query: 2 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 58
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+ S
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 59 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 175
+T G + T G+ +G+LG G+T ++ P+ + LE ++G Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205
Query: 176 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
+V++FG G LG G + P+ I GI + +V+ G + VAL G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 294
G+ L G + P+ + L + V T L G VY +G G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 295 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
G G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 21/313 (6%)
Query: 47 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKG 102
PS + + A + + G V CG S G D+N +L ++K
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459
Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
V + + G T T G V + G +G+LGHG++ + PK I + VV ++
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
AG + AVT +G +Y++G G LGHG+ + R I T + +V VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHT 573
Query: 223 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633
Query: 282 SVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 338
VY +G +G GS LRP++++ L A + +S G H + ++ +
Sbjct: 634 QVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686
Query: 339 FGFGDNERAQLGH 351
+ +G+N Q G
Sbjct: 687 YAWGNNSMGQCGQ 699
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 9 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 66
HTL + VFS G G LGHG +TQ I P VV VSA H+A V
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 67 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 124
+ G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583
Query: 125 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
+ G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 185 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
CLG G + L+P+ I+ +V VS GD H +AL VY WG G G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Query: 244 HGDEIDK-TLPEPLSSLKSHLAVQVCA 269
G+ T P+ +S L Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)
Query: 47 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 105
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081
Query: 106 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 162
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140
Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198
Query: 223 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 281
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258
Query: 282 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 341
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 342 GDNERAQLGHDTLRGCLEPT 361
G N QLG EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 124 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053
Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 241
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 242 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 301
LGHG+ + P + +L+ VQ+ + + V+ G ++ FG +G LG +
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171
Query: 302 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 350
S+K L P + +L + + Q++ GL HT+ V+ G + + FGD + +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
VY +GS S+ L G Q LQP+ +F + AG + + G V GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 292
G G LG GD +++ + L + + H +++ + + T G V+ +G +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 293 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
LG G S P+++ L+ V +S G H+ VT+ G L+ +G+ + +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 12 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 71
L S V++ G C LG G + I +A +V VS ++H + +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686
Query: 72 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
+ G+NS CG ++ PI +P+ V L G+ +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 347
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 348 QLGHDTLRGCLEPTEIFIQEMEE 370
+LGH P +I + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
S+++ G + G LG G E ++ + T S VQ++ E V G++F G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107
Query: 76 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 133
S G ++ P L+ +L+ V K+V +G LT G V+ G G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
+LGHG+ + PK + L + SV IA G ++ A+T +G V ++G G LGHG+
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
D+L+P+ ++ + +GD + + V++WG G G LG G LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285
Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
+ SL V+V + + L +G+VY +G F LG G D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342
Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
L+ + I+TG H V +D G ++ +GDN+ QLG T+ P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 111
V V++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 170
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
+T + V+S+G G LG G P I++ G+ VV+V G + VAL SG
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
VYTWGKG LGHG P+ +++L+ + + D+G VY +G
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
G LG G + RPR++ +L+ H+ +++ G HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)
Query: 1 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 56
+ I G ++S + V++CG G LG G T V +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079
Query: 57 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 115
+ HA + G+VF+ G+ GH NR +PRLVEAL+ + V G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 116 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 173
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196
Query: 174 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 233
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254
Query: 234 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
WGKG LGHG + P+P+ L+ + V + D G VY +G G
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
G + V+ K P ++ L A V++++ G H++
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 120
V Q G+V+ CG+ ++ G T N P+ P + L+ K+V +G LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090
Query: 121 RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
G V + G G+LGHG+ TLD+P + + +A G S+ A++ G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 236
++G G LGHG+ +L+P+ + G VV+V+ G D +AL G V++WG
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
G G LG G P + L VQ+ + + L G V+ +G + LG
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264
Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
G V +P+ + LR V ++ G H + VTD G+++ +GDN+ Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 71 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
++ G GH DT+ P + AL+ + V G +++ +T G++ T G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695
Query: 131 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 189
T+ +LGHG++ DR P + L + V V + +G ++ LA+T G+V+++G G LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755
Query: 190 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 249
+G + LQP +++ R V RV AG + VAL S G +YTWGK C LGH ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808
Query: 250 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
+ ++P +SSL+ V V L +G V+G+G + P S+
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867
Query: 305 VLRPRILDSLRAHHVSQISTGLYHTVVVT 333
+LR IL SL S I+ ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 14/281 (4%)
Query: 3 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSAS 58
+ +G H L L + V++ G G LGHG +S+ R + + V ++
Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADIACG 4196
Query: 59 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 118
H+A + SG V T G GH D+ + RP+LVEAL G + G L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 119 TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
I +V + G +G+LG G + P I L +G VV++ G + +A+T +G
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGA 4314
Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
VY++G G LGHG +P+ + +G ++ ++ G H VA SG VYTWG
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
G LG G P +++L+ V+V T L
Sbjct: 4373 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)
Query: 124 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
V G N QLG G + PT ++I+ L + IA G + V+ +G VY+
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043
Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
G G+N LG G H+ P + R+ + V V +G +H +AL G V++WG+G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 241 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
LGHG+ P + +L++ V + + G +Y +G +G LG D
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163
Query: 301 VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 358
L+P+++ +L V Q++ G T+ +T+ G +F +GD + +LG G
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220
Query: 359 EPTEI 363
P EI
Sbjct: 3221 TPHEI 3225
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 117 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
FL I + ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
G + ++G G+ LGHG D P + + V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 235 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
G G G LG+G+ + L E L ++ +V A + + L G +Y +G
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801
Query: 292 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
+R V + PR++ SL+ + ++ + H + ++ G +FG+G N+ Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
Query: 111 GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 167
L++ G TI G G N GQLG G + PTP ++++ L V Q+A G
Sbjct: 4042 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093
Query: 168 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
+ AVT +G +++ G GS LG G P + + + + V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
G VY WG+G G LGHG+ + P+ + L + + + +G V +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213
Query: 288 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 345
+G LG D S+ LRP+++++L + I+ +G T+ +TD ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 346 RAQLGHDTLRGCLEPTEI 363
+LG GC P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
+ Q+A + ML ++ G +Y++ E +P ++ +
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
H +A+DS+ Y+WG G LGHGD + +P +++L+ H V + +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 335
G++ +G + LG G SD P ++ +L H V ++ +G H++ +T
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 336 GRLFGFGDNERAQLGHDTLRGCLEP 360
G +F +GD + +LG+ G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
D+ ++ + +Y WG + G LG + P P +L VQ+ ++ F +
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098
Query: 279 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 336
G ++ G+GS G G SD P +L SL+ V +++ +G H + +T G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 337 RLFGFGDNERAQLGH 351
++ +G+ E +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)
Query: 93 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 151
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 152 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 210
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127
Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 269
+++VS G H +AL G+V++WG+ G LG G + + +P+ + SL+ QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
+F L TG+ +G+G G L V +++ +P + +L+ V IS G HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 330 VVVTDRGRLFGFGDNERAQL 349
V+T+ G++F FG N QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)
Query: 1 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
+Q +G +H+LL+ SN V+SCG + G LG PE Q ++ HV
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
VS + H+ V G+VF G S G + F P ++AL G+ QV+ G
Sbjct: 77 DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
+ L+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG ++ A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195
Query: 172 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 226
+ G SFG GSN L + +++ +P +I K + V+ +S G EH L
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251
Query: 227 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 286
G V+T+G G L + P+ + + ++ CA + TG V
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 287 G 287
G
Sbjct: 312 G 312
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)
Query: 48 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 107
S ++Q ++ E+H+ + + +V++CGDNS G R ++ RP ++AL +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78
Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 166
V+ G + + +G V G+ + GQLG G+ + P I L + ++Q++ G
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137
Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
+ LA++ +G V+S+G S LG G+ + P+ +++ +GI + +V+AG H AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195
Query: 226 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 282
+G + WG G L G+++ + + +P + +LK+ + + T VL + G
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 341
V+ FG G L R P++++ + VSQI YHT+ V G++
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 342 G 342
G
Sbjct: 312 G 312
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 267
GI +++ ++G+ H + L S+ VY+ G G LG + PEP+ +L H+ +
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80
Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
C K + + G V+ +G G LG + + P + +L + Q+S G Y
Sbjct: 81 CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137
Query: 328 HTVVVTDRGRLFGFGDNERAQLG 350
H++ +++ G +F +G N QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)
Query: 102 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 161
G Q +G + L V +CG N+ GQLG P+ I LE + V +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80
Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 220
+ G + LAV G V+++G+GS LG GE + P+ I T I +++VS G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138
Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 279
H +AL V++WGK G LG G E + P+ + SL+ QV A +F L
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 280 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
G+ +G+G G L R V + +P + +L+ V IS G HT V+T G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 340 GFGDNERAQLGH 351
FGDN QLG+
Sbjct: 259 TFGDNRSGQLGY 270
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)
Query: 50 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 168
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 228 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
G + WG G L G + P + +LK+ V + T VL G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 285 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 340
FG G LG+ P++ V R +D L VSQI G YHT+ V G++
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 341 FG 342
FG
Sbjct: 312 FG 313
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 1 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 52
+Q +G H+LL+ +N V SCG + G LG PE Q + ++
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
VS + H+ V G+VF G S G + F P+ + L + QV+ G
Sbjct: 80 --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
+ L+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196
Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 230
+ G + +GS S L ++ +Q + + K + VV +S GD H L G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 287
V+T+G G LG+ +K P+ + + ++ C + TG V FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)
Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
++T V G N LG GD PK + L +++ S+ +GP ++L T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93
Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
GVVY++G LG+G + + P + T V+ V+ G H +AL + G ++ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152
Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
G CG +G G ++ P +++ L + V + + + ++D+G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
LG + G L P + +L V+QI G HT+ +TD G L+ +G N QLG +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269
Query: 354 LRGCLEPTEIFIQE 367
L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 58 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 118 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 176
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
++++G + +G G ++ PR + VV ++ G +A+ SG VY WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
G LG G+ ++ P +++L Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 297 PDRGVSDKVLRP 308
G + +L P
Sbjct: 267 --TGSKNNLLSP 276
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)
Query: 4 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 62
T+ + N VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 63 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 122
+ G V+ G N G+ TN+ I ++ L +V G + + L G
Sbjct: 88 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 123 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
+ G N GQ+G G T ++PTP+ + VV IA G + +AV +G VY +G
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 242
N LG G ++L P + G+ V ++ G H +AL G +Y WG G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265
Query: 243 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
G G + + P + K + + C + G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 1 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
+ VL SG+V+ G N + G + + P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 177
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 178 YSFG 181
Y +G
Sbjct: 308 YMWG 311
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 94 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
P+ ++ KG +QV AG +T+ ++T GS HGQLGHGD PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400
Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 205
+ L+ SV +++ G + + +T G +YSFGS CLG + + L+P + F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459
Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
+ + +VS GD H++AL S VY+WG G G LG E D P+ + + V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 315
VC +F+L TG V G LG ++ + + + L
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577
Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
+ + IS G HT + +RGRL FG N+ QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 199 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 253
P+ + F+ G +V AGD H + +YTW G G LGHGD P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399
Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
+ + L+ +V T + D G +Y FG +G LG ++ +VL P ++D
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458
Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 366
V Q+S G H + +T ++ +G E +LG D+ P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 34/304 (11%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 59
+++ G T+ I++ ++S GS G LG ++ + ++F V QVS +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
+H + +S V++ G CG D+ ++ P+ VE +G+ V G +
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525
Query: 115 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 162
+ LT+ G V CG N H +LG H + P S+ +++ + I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585
Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
G ++ A+ G + +FGS LG G+ L + G V+RVS GDE
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644
Query: 223 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
A + +++ WG G G L G +I + P P+ H+ C R T
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703
Query: 276 VLVD 279
++V+
Sbjct: 704 LIVE 707
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 94 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477
Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 57 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
+ T LT G V CG N +LG + + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 220 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 272
E +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718
Query: 273 KTFVLVD 279
T ++V+
Sbjct: 719 HTILIVE 725
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484
Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
+S G H VV+T ++ +G E +LG D+ P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)
Query: 22 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 82 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
G P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
L L ++V T D ++ +G G G L +
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697
Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
RP I SL HHV +S +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 195 DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS--GYVYTWGKGYCGA 241
DEL R + RR+ + R S E +A+ +S VY WG G
Sbjct: 300 DELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG---- 355
Query: 242 LGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 300
K+ P+ L +KS A QVCA V+ +Y + M G+ G
Sbjct: 356 --------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG 407
Query: 301 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 356
DK +P+ ++ L+ + Q+S G TV VTD G+L+ FG + +G D + G
Sbjct: 408 HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE 467
Query: 357 CLEPTEI 363
LEP ++
Sbjct: 468 VLEPMQL 474
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 117 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 174
++T V G N LG GD PK + L +++ S+ +GP +L+ T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93
Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
GVVY++G LG+G + + P + T VV V+ G H +AL + G V+ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152
Query: 235 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
G CG +G G ++ P +++ L V + + + ++D G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
LG + G L P + +L + V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269
Query: 354 LRGCLEPTEIFIQE 367
L P I +++
Sbjct: 270 KNNLLSPAHIMVEK 283
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)
Query: 50 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
A V SASE A +V + +VF G N S C G D N+ P+ +E L G K ++
Sbjct: 24 ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80
Query: 110 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
G L+ G V+ G N + QLG+G T P + + VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 225
+A+ +G V+++G + +G G ++ PR + +H+ RV + G +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196
Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
+G VY WG G LG G+ ++ P +++L S Q+ T L D G +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 286 FGWMGFGSLGFPDRGVSDKVLRP 308
+G +G LG G + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
H + G V+ G N G+ TN+ I ++ L +V G + + L
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145
Query: 121 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
G V G N GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 181 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
G N LG G ++L P + + V ++ G H +AL G +Y WG G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263
Query: 241 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 287
LG G++ + P + K + + C + G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 1 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
+ VL +G+V+ G N + G N P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 177
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 178 YSFG 181
Y +G
Sbjct: 308 YMWG 311
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 94 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 147
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 148 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 205
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFF 477
Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 265
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 315
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 316 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 44/309 (14%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 56
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 57 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 111
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 159
+ T LT G V CG N +LG + + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSA 217
IA G ++ A+ G + +FG LG G L I G V+RVS
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSC 657
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCAR 270
GDE +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-R 716
Query: 271 KRKTFVLVD 279
T ++V+
Sbjct: 717 GWHTILIVE 725
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 261
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 262 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 321
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQ 484
Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
+S G H VV+T ++ +G E +LG D+ P + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)
Query: 22 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 81
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 82 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 140
G + P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 141 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 191
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 192 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 250
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Query: 251 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 303
L L ++V T D ++ +G G G L +
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697
Query: 304 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 335
RP I SL HHV +S +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 281
V + VY WG G K+ P+ L +KS A QVCA V+
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388
Query: 282 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 339
+Y + M G+ G DK +P+ ++ L+ + Q+S G TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 448
Query: 340 GFGDNERAQLGHDTLRG--CLEPTEI 363
FG + +G D + G LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVSGPEVLEPMQL 474
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 15 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 74 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
+ QP + +GI V RV+ G H + L G VY WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
P++ K + + C + G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 90 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 148 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 265
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 15 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 74 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
+ QP + +GI V RV+ G H + L G VY WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
P++ K + + C + G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 90 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 148 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 206
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 207 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 265
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 266 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 117
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 237
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 90 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
PIF E L+ + C TAG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 5/275 (1%)
Query: 15 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 74 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
+ QP + +GI V RV+ G H + L G +Y WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
P+ K + + C + G VY +G
Sbjct: 301 TPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
N + + ++F G N S C G D I PR +++L G ++ G
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 90 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 147
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 148 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 205
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 206 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 264
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 265 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 324
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 325 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 5/275 (1%)
Query: 15 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 73
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 74 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 133
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 134 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 193
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
+ QP + +GI V RV+ G H + L G +Y WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 254 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 287
P+ K + + C + G VY +G
Sbjct: 301 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 118
N + + ++F G N S C G D I PR +++L G ++ G
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 239 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 55 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
+S + H A V + +++ G N+ G + T + +P V+ALK K G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
N T T G V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
+G ++ +G S +G + P+ + G + +S G H + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212
Query: 233 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
T+G+ CG LG ++ ++ +P+P+ + + VQV T VL + +VY FG
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
FG LG V P+ ++ ++ +S I+ G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 18/247 (7%)
Query: 6 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 63
GR HTL+ + V++ G + G LG G +T + +F I+F S + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ + G++F GDNS G + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210
Query: 124 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
++T G G+LG + L P P P G VVQ+A G + + +T VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265
Query: 180 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
FG G LG G E P+AI+ + + I + + G+ H + G +YT+G G
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323
Query: 239 CGALGHG 245
G LG G
Sbjct: 324 HGKLGLG 330
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 273
+S GDEH + + +Y +G G LG G + + P + +LK + C R
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH- 98
Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
T V + G VY G G LG D S R + Q+S G + +T
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALT 156
Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
+ G LF +GDN Q+G + + P ++ +
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV 188
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 14/143 (9%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVSAS 58
I+ G YH+ ++ +++ G CG LG Q + R+ P VVQV+
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGL---PNQLLVNHRMPQPVPGIPGKVVQVACG 251
Query: 59 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 115
H VL V+T G G +F P+ +E +K + G N T
Sbjct: 252 GGHTV-VLTEKAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHT 307
Query: 116 GFLTIRGHVHTCGSNTHGQLGHG 138
+T G ++T G HG+LG G
Sbjct: 308 ALITDMGLMYTFGDGRHGKLGLG 330
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 53 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 112
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 172
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 173 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 232
+G ++ +G S +G + P+ + G V +S G H + + G +Y
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 233 TWGKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 290
+G+ G LG +++ + P+ +S + + +QV T VL + +VY FG
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV-IQVACGGEHTVVLTE-NAVYTFGLGQ 270
Query: 291 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
FG LG + P++++++R +S IS G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLF--ETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 6 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
GR HTL+ + +V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ + G++F GDNS G ++ + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSN-VCVPQQVTI--GKPVSWISCGYYHSAFVTTDGE 210
Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
++ G +G+LG + L + TP+ ++ + E V+Q+A G + + +T N V Y+FG
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVLTENAV-YTFG 267
Query: 182 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
G LG G + +P+ I+ R + I + S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYI--SCGENHTALITDIGLMYTFGDGRHG 325
Query: 241 ALGHG 245
LG G
Sbjct: 326 KLGLG 330
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 213 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARK 271
V +S GDEH + + +Y +G G LG G + + P + +LK + + C R
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 331
T V + G+VY G G LG D + S H + Q+S G +
Sbjct: 98 H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS--EHKIKQLSAGSNTSAA 154
Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
+T+ GRLF +GDN Q+G + P ++ I
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI 188
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 57/397 (14%)
Query: 17 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 73
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 74 CGDNSSFCCG-----HRDTNRPIFRPRLVE--------ALKGVPCKQVTAGLNFTGFLTI 120
G N + G +D N L+E AL + +V N T +T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 121 RGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 178
G T G+ + G LG+ D+ R + L E + Q+A G +++A+T G VY
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTGKVY 248
Query: 179 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------HVVRVSAGDEHVVALDSSGY 230
++G+G F LG R ++ R +G+ +++ V AG H A+D+ G
Sbjct: 249 TWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 231 VYTWGKGY---CGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYG 285
VY WG CG +E + +P + +L+ + + + T L++ G V
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLA 359
Query: 286 FGWMGFGSLGFPDRGVSDKVLR-----------PRILDSLRAHHVSQISTGLYHTVVVTD 334
+G LG PD + + V++ P I+ L +V Q+ G +H + VT
Sbjct: 360 WGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL--TNVIQVVCGTHHNLAVTS 417
Query: 335 RGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEE 370
G+++ +G E ++G D PT + + ++E
Sbjct: 418 DGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKE 454
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 51 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCK 106
+++ V A H+ + G+V+ G N + CG + I +P LV+AL+G K
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 107 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 154
+T G + T L G V G + QLG D P+++ E+
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLG---IPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 155 --VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIH 211
+ +V+Q+ G + LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIK 453
Query: 212 VVRV 215
V +
Sbjct: 454 EVAI 457
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 31/257 (12%)
Query: 12 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 69
+ N F+ G+ C GVLG+ + T++ P + Q++ +H + +G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLATGTDHIIALTTTG 245
Query: 70 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 129
+V+T G+ F G R R + + L V AG + + +G V+ G
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGL 305
Query: 130 NTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 182
N Q G G + +PT + E +V I G + LA+ +G V ++G
Sbjct: 306 NITRQCGIEVEDEEEGAVITKPT---LVDALEGYNVKSITGGEHHTLALLEDGRVLAWGR 362
Query: 183 GSNFCLGHGEQHDELQPRAIQTFRRKG-------------IHVVRVSAGDEHVVALDSSG 229
LG D P + + +V++V G H +A+ S G
Sbjct: 363 DDRHQLGI---PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDG 419
Query: 230 YVYTWGKGYCGALGHGD 246
VY+WG +G GD
Sbjct: 420 KVYSWGSAENYEVGQGD 436
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 38/373 (10%)
Query: 18 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
+F+ G++ G LG G + + +F A + V+ H+A V G +F CG N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 78 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 136
G T + R + + L+G P +QV G +FT LT +G V +CGSN GQLG
Sbjct: 77 KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 137 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 190
HG P++I L E VV +AAG + LA T G V+ +G SG C G
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191
Query: 191 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
Q+ L A + R G+ V AG +H +L +G +Y WG+ G L
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS-RA 248
Query: 248 IDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
+ LP+ + + + V + +TG V+ +G +G LG R +
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG--RRLEPPEA 306
Query: 306 LRPRILDSLRAHH---------------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
+P DS A ++IS G H + V R + +G NE G
Sbjct: 307 QKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVI-RDKCCSWGWNEHGMCG 365
Query: 351 HDTLRGCLEPTEI 363
T PT +
Sbjct: 366 DGTESNVWTPTPV 378
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 114/285 (40%), Gaps = 35/285 (12%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 58
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 59 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 109
HA +G VF G C G N P+F P V L+
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 168
AG + + LT G ++ G N HGQL P P+ I A + V + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 169 LAVTGNGVVYSFGSGSNFCLGHG----------EQHDELQPRAIQTFRRKGIHVV----R 214
+A T G V+++G LG EQ L + Q +H +
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATE 337
Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 259
+S G EH +A+ +WG G G G E + P P+ +L
Sbjct: 338 ISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 212 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 270
+ R S E V A + ++ WG G LG G + D LP+ LS ++ V
Sbjct: 1 MARESCASETVSA---AAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGG 57
Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
+ V+ D G ++ G G LG G +++VLR I LR + Q++ G T+
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGL---GHTEEVLRFTICKPLRGCPIRQVACGWDFTI 114
Query: 331 VVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 363
++T++G++ G N QLG R C+ P I
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAI 148
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 55 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 114
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 115 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 174
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 175 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 234
G ++ +G S +G ++ + P + G + +S G H + G +YT+
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTF 214
Query: 235 GKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
G+ G LG +E+ P L +QV T VL + VY FG FG
Sbjct: 215 GEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAFGLGQFGQ 273
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
LG + P+I++ ++ + IS G HT ++T+ G L+ FGD +LG
Sbjct: 274 LGL--GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)
Query: 6 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 63
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 64 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 123
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 124 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
++T G +G+LG + L + +P+ + + E V+Q+A G + + +T VVY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHTVVLT-EKVVYAFG 267
Query: 182 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
G LG G + +P+ I+ R K + +S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTELGLLYTFGDGRHG 325
Query: 241 ALGHGDE 247
LG G E
Sbjct: 326 KLGLGME 332
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 273
+S GDEH + + +Y +G G LG G + P + +LK + + C R
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH- 98
Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
T V DTG VY G G LG D D+ +I+ A + Q+S G + +T
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 334 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 365
+ G+LF +GDN Q+G + P E+ +
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV 188
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 194
L HG L PL+ +V P + + +Y++G NF LGHG Q
Sbjct: 107 LKHGSNLYIQDKDGYTPLD----LVMKDRPPHIVFKTSDPTELYTWGDNVNFTLGHGTQQ 162
Query: 195 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
+ P ++ F R G+++ ++ H V L G VYT G G G LGHGDE+ +P
Sbjct: 163 SKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPR 222
Query: 255 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 314
+ L+ H QV K T VL + G VY FG F LG + V R ++
Sbjct: 223 LVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTM 282
Query: 315 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
+ V ++ G +HTV+ T + ++ G N QLG+
Sbjct: 283 KGKTVLGVAAGRFHTVLWT-KDAVYTVGLN-GGQLGY 317
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 74
+ +++ G ++ LGHG + ++ FP S ++ Q+ + H+ F+ Q GQV+TC
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTC 202
Query: 75 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
G GH D PRLVE L+G PC QV + T LT G+V+T G NT Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQ 261
Query: 135 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 188
LG + P P S P + + +V+ +AAG + + T + VY+ G L
Sbjct: 262 LG----IQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGG-QL 315
Query: 189 GHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
G+ + + + PR + K I++ VSA D V + G +Y + C L
Sbjct: 316 GYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLA 374
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 19/246 (7%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
Q+ ++H++ +S V++CG G LGHG E T C+ + QV+ +++
Sbjct: 182 QMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CLVPRLVEGLRGHPCTQVAGAKD 240
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 118
H + + G V+T G N+ G + PR ++A +KG V AG F L
Sbjct: 241 HTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAG-RFHTVL 299
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIAPLEEVG-SVVQIAAGPSYMLA 170
+ V+T G N GQLG+ L P P+ ++ L ++ ++A +
Sbjct: 300 WTKDAVYTVGLNG-GQLGY---LQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVC 355
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
V+ G +Y L + + + L I + H+ V ALD +
Sbjct: 356 VSERGDIYLLSEYQCKKLASKQLNLKKVLVSGGILEHKAAPEHLKENGGQPASVFALDQA 415
Query: 229 GYVYTW 234
G V+ W
Sbjct: 416 GRVFCW 421
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 177 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 296
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 297 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 344
S V R L+ + ++ G +HTV+ T R ++ G N
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLN 310
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
+ V++ G + LGHG + ++ F+R S ++ QV + H+ F+ Q GQ
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSR----SGIYIKQVVLCKFHSVFLSQKGQ 197
Query: 71 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGPGGRLGHGD-EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 131 THGQLGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SG 183
QLG + P+ P+ I G +++ +AAG + + T VY+ G G
Sbjct: 257 IFHQLG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 184 SNFCL--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 241
CL +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 242 LG 243
+
Sbjct: 372 MA 373
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 21/247 (8%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
Q+ ++H++ +S V++CG G LGHG E T C+ + + + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CLVPRLVEGLNGHNCSQVAAAKD 239
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 118
H + + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-------SVVQIAAGPSYMLAV 171
R V+T G N GQLG LD K + +V ++ +AA + V
Sbjct: 299 WTREAVYTMGLNG-GQLGC--LLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 227
T G +Y C + L+ + ++ H+ ++A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDG 413
Query: 228 SGYVYTW 234
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 171
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258
Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 230
T +G++++FG+G + LGH +EL+P + G V +++ G H +A S G
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
V+++G G G LG+G D+ +P P+ S K +++ G+ W+
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRV 215
++QI G + LA++ G ++++G + LG G + P+ ++ G+ + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL--AGVPLAQI 196
Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
SAG+ H +AL SG +Y+WGK CG LG G K P + L + V +
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSA 256
Query: 276 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTD 334
+L G ++ FG G LG + LRP ++ L + V+QI+ G +HT+ V+D
Sbjct: 257 LLTQDGLLFTFGAGKHGQLG---HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 335 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
G++F FG + QLG+ R L P + + EE
Sbjct: 314 LGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEE 349
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 60 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 117
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257
Query: 118 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 175
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 176 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
V+SFGSG + LG+G D+L P ++ + + + ++ E ++ + + W
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Query: 236 K 236
K
Sbjct: 376 K 376
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 95 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--L 152
R L+ Q+T G + L+ G + G N HGQLG G R P + P +
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIV 185
Query: 153 EEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRK 208
E + V QI+AG ++ +A++ +G +YS+G LGH E D+ P I+ +
Sbjct: 186 EHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQ 243
Query: 209 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV- 267
+ V+ G H L G ++T+G G G LGH ++ P ++ L + Q+
Sbjct: 244 KVEF--VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301
Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 306
C R + D G V+ FG G LG + G D+++
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLG--NGGTRDQLM 338
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 309 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
R L+ + QI+ G YH++ ++ G LF +G N QLG
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 171
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 44/391 (11%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---------SAAHVVQVSASENHAAFV- 65
+ V+S GS L G LGHG + T+ V I + + ++++ ++ F
Sbjct: 67 NKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTYSIFSG 126
Query: 66 ---LQSGQVFT-CGDN--SSFCCGHRDT----NRPIFRPRLVEA--LKGVPCKQVTAGLN 113
++ QVF CGDN + G+ N + ++++ +KG KQ+ +G
Sbjct: 127 YDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTY 186
Query: 114 FTGFLTI-------------RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVV 159
+ R + G++ GQ+G + + P + L E+G +
Sbjct: 187 HNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIG-IK 245
Query: 160 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 219
+I+ G ++ +A++ +G +YSFGS + LG+G+ +E +P+ I + ++ + G
Sbjct: 246 KISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGF 305
Query: 220 EHVVALDSSGYVYTWGKG---YCGALGHGD---EIDKTLPEPLSSLKSH-LAVQVCARKR 272
H VAL S + TWG+ C + G SSL H +Q+ A
Sbjct: 306 FHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKIIQIGASNL 365
Query: 273 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
+++L + G++Y G G G +L + V + + +V
Sbjct: 366 NSYILTENGNIYSIGSNDHGQCGIEKSNFKKGILNKIKIGDDGNIKVKKFYSRFKTVIVE 425
Query: 333 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
T GR FG+G N QL +T P E+
Sbjct: 426 TTDGRFFGWGSNFDHQLALETRCIYFTPMEL 456
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 1 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 53
+ + G +HT+ L S++ + + G + PE T SFT + + + ++
Sbjct: 299 IDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKII 358
Query: 54 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQV 108
Q+ AS ++ + ++G +++ G N CG +N F+ ++ +K + K+
Sbjct: 359 QIGASNLNSYILTENGNIYSIGSNDHGQCGIEKSN---FKKGILNKIKIGDDGNIKVKKF 415
Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV---GSVVQIAAGP 165
+ T G GSN QL TP + L + +++ I+
Sbjct: 416 YSRFKTVIVETTDGRFFGWGSNFDHQLALETRCIYFTPMELNNLNRLHKDYNIIDISISL 475
Query: 166 SYMLAVTGN 174
S+ +++ N
Sbjct: 476 SHCISLNSN 484
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 157 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 216
++ ++ G + +T G++ +FGSGSN CLGHG +D QP+ ++ G +V+VS
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALL--GYELVQVS 456
Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 276
G HV+A+ + V++WG+G G LG + P+ +S A +V + +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMI 516
Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDK---------VLRPRILDS--LRAHHVSQISTG 325
+ + G F LG +++ V +++ S L + I G
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 363
H+V VT++G+ F FG N+ QLG R P ++
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV 614
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 8 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 61
+ T L + + GS G LGHG +F + P +VQVS +H
Sbjct: 409 FTTCLTDRGIIMTFGSGSNGCLGHG-------NFNDVTQPKIVEALLGYELVQVSCGASH 461
Query: 62 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
V +VF+ G DN +D++ P+ V ++V G++ + ++
Sbjct: 462 VLAVTNEREVFSWGRGDNGRLGLATQDSHNC---PQQVSLPADFEAQRVLCGVDCSMIMS 518
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-------------GSVVQIAAGPS 166
+ + CG+N +LG P S +EEV +V I G +
Sbjct: 519 TQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTA 578
Query: 167 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVAL 225
+ +AVT G ++FGS + LG + P ++ G+ + ++A GD +A+
Sbjct: 579 HSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP-----YQVSGLQGITMAACGDAFTLAI 633
Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 262
+ G VYTWGKG G LG +E D +P+P+ +SH
Sbjct: 634 GAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQLDESH 669
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 158 VVQIAAGPSYMLAVTGNGVVYSF-----GSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 210
V+Q++ G + + VT +G + ++ GSG G EQ +QP+ I F + G+
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQ---MQPQFISRFLEGQSGV 398
Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
+ VS GD L G + T+G G G LGHG+ D T P+ + +L + VQV
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCG 458
Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
+ + V+ +G G LG D P+ + ++ G+ ++
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGL---ATQDSHNCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 361
+++ + ++ G+N +LG D + G EP+
Sbjct: 516 IMSTQHQILACGNNRFNKLGLDKVSGTEEPS 546
>sp|Q6ZPR6|IBTK_MOUSE Inhibitor of Bruton tyrosine kinase OS=Mus musculus GN=Ibtk PE=1
SV=3
Length = 1352
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 135 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML-AVTGNGVVYSFGSGSNFCLGHGEQ 193
L HG +L + ++PL+ + + P++++ T VY++G +NF LGHG Q
Sbjct: 106 LKHGVSLYMQDKEGLSPLD-----LLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQ 160
Query: 194 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
+ + P + F R G++V +V H V L G VYT G G G LGHGDE +P
Sbjct: 161 NSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVP 220
Query: 254 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 313
+ L H QV A K T VL D G VY FG F LG S V R
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKY 280
Query: 314 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 351
L+ + ++ G +HTV+ T R ++ G N QLGH
Sbjct: 281 LKGRTIIGVAAGRFHTVLWT-REAVYTLGLN-GGQLGH 316
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 26/243 (10%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 70
+ V++ G + LGHG + ++ F+R S +V QV + H+ F+ Q GQ
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSR----SGVYVKQVVLCKFHSVFLSQKGQ 197
Query: 71 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 130
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGRGGRLGHGD-EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLN 256
Query: 131 THGQLGHGDTLDRP----TPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
QLG + P P+ I G +++ +AAG + + T VY+ G
Sbjct: 257 MFHQLG---IIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 186 FCLGH-----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
LGH GE+ PR + K I V V+A D V + + G +Y C
Sbjct: 313 -QLGHLLDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQCK 370
Query: 241 ALG 243
+
Sbjct: 371 KMA 373
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 118
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 119 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 171
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 227
T G +Y C + L+ + ++ H+ V+A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMATKQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDG 413
Query: 228 SGYVYTW 234
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 27/263 (10%)
Query: 119 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 177
T+ G V T G GQLG G D ++R P + E++ VQ AAG + + + +G +
Sbjct: 38 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDI---VQAAAGGMHTVCLGASGSI 94
Query: 178 YSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 235
Y+FG LG E+ E+QP ++ + VV+VSAGD H AL G V+ +G
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAEK----VVQVSAGDSHTAALTEDGRVFVFG 150
Query: 236 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
+ G +G + + K++ P+ + +++ + +L G +Y G G
Sbjct: 151 SFRDNNGVIGLLEPMKKSMV-PVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 294 LG-----FPDRGVS---DKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTDRGRLFG 340
LG F +RG +++L P+ + L+A H + G Y T V+ G ++G
Sbjct: 210 LGRVPERFTNRGGRKGLERLLVPQCIH-LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYG 268
Query: 341 FGDNERAQLGHDTLRGCLEPTEI 363
FG + QLG + C P +
Sbjct: 269 FGLSNYHQLGTKNTQACYAPQNL 291
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 135/323 (41%), Gaps = 45/323 (13%)
Query: 69 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 128
GQV T G G + +P LV + + Q AG T L G ++T G
Sbjct: 41 GQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIV--QAAAGGMHTVCLGASGSIYTFG 98
Query: 129 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--GSNF 186
N G LG DT + + +E VVQ++AG S+ A+T +G V+ FGS +N
Sbjct: 99 CNDEGALGR-DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNG 157
Query: 187 CLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
+G E + P +Q V+++++G++H+V L G +YT G G G LG
Sbjct: 158 VIGLLEPMKKSMVPVQVQI----NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGR- 212
Query: 246 DEIDKTLPEPLSS------LKSHLAVQVCARKRK----------------TFVLVDTGSV 283
+PE ++ L+ L Q K K TF + G V
Sbjct: 213 ------VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHV 266
Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRLFGF 341
YGFG + LG + + P+ L S + S I S G +HTV V G+ +
Sbjct: 267 YGFGLSNYHQLGTKN---TQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 342 GDNERAQLG-HDTLRGCLEPTEI 363
G E +LG + EPT I
Sbjct: 324 GRAEYGRLGLGENAEEQSEPTPI 346
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 38/360 (10%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q G HT+ + S S+++ G + G LG + + A VVQVSA +
Sbjct: 76 VQAAAGGMHTVCLGASGSIYTFGCNDEGALGR-DTSEEGSEMQPGKVELAEKVVQVSAGD 134
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 112
+H A + + G+VF G SF RD N P+ + + V+ P ++ +G
Sbjct: 135 SHTAALTEDGRVFVFG---SF----RDNNGVIGLLEPMKKSMVPVQVQINTPVIKIASGN 187
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGS----V 158
+ LT+ G ++T G GQLG L+R L+ GS
Sbjct: 188 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHF 247
Query: 159 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
+ G + AV+ G VY FG + LG P+ + +F+ + S G
Sbjct: 248 QDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGG 307
Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVL 277
H V +DS G Y+ G+ G LG G+ +++ P P+ L +V A ++ +
Sbjct: 308 QHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINSVASGA--SVSYAV 365
Query: 278 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTVVVTDR 335
G V+ +G LG G + V P + L V +S+G HTV++ +
Sbjct: 366 STDGCVFAWGMGTNLQLG---TGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRK 422
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 159/375 (42%), Gaps = 36/375 (9%)
Query: 18 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
V + G G LG G + + + +VQ +A H + SG ++T G N
Sbjct: 43 VLTLGQGDVGQLGLGEDIMERKKPALVTL--TEDIVQAAAGGMHTVCLGASGSIYTFGCN 100
Query: 78 SSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 133
G RDT+ +P VE + V QV+AG + T LT G V GS + +G
Sbjct: 101 DEGALG-RDTSEEGSEMQPGKVELAEKVV--QVSAGDSHTAALTEDGRVFVFGSFRDNNG 157
Query: 134 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 190
+G L P KS+ P++ ++ + V++IA+G +++ +T +G +Y+ G G LG
Sbjct: 158 VIG----LLEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRV 213
Query: 191 --------GEQHDE--LQPRAIQTFRRKG---IHVVRVSAGDEHVVALDSSGYVYTWGKG 237
G + E L P+ I + KG +H V G A+ G+VY +G
Sbjct: 214 PERFTNRGGRKGLERLLVPQCIH-LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLS 272
Query: 238 YCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWMGFGSLG 295
LG + P+ L+S K+ + + T + G Y G +G LG
Sbjct: 273 NYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLG 332
Query: 296 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
+ +++ P + L ++ +++G + V+ G +F +G QLG
Sbjct: 333 LGEN--AEEQSEPTPIPDLP--KINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEE 388
Query: 356 GCLEPTEIFIQEMEE 370
P ++ + +E+
Sbjct: 389 DVWSPEQMTGKHLED 403
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 39/282 (13%)
Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQ 160
+++T G + +T G + CG N GQLG G T D P TP KS+ P++ Q
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------Q 105
Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
+A G + + +T NG V S GS S LG HG + + P+AI+ + K VV ++AG
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEK---VVCIAAG 161
Query: 219 DEHVVALDSSGYVYTWGKGY--CG---ALGHGDEIDKTLPEP--LSSLKSHLAVQVCARK 271
H VA +SG V+ WG G CG G + T EP ++ L++ A+ V A
Sbjct: 162 LRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 272 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGL 326
+ L D G VY +G G L ++ P + + AH V+ I +G
Sbjct: 222 DHSASLTDAGEVYVWGSNKHGQL------ANEAAFLP-VPQKIEAHCFQNEKVTAIWSGW 274
Query: 327 YHTVVVTDRGRLFGFGDNERAQLGH--DTLRGC-LEPTEIFI 365
H V T+ G++F +G + QLG +T G LE + F+
Sbjct: 275 THLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 316
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 45 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKG 102
+F V +++ H+A V G +F CG N GH + + P F P ++L G
Sbjct: 44 DFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTE-DIPYFTP--CKSLFG 100
Query: 103 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 161
P +QV G +FT LT G V +CGSN+ GQLG R P++I +E VV I
Sbjct: 101 CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKE--KVVCI 158
Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFRRKGIHVVR---V 215
AAG + +A T +G+V+ +G+G C L G Q L A + R G+ + V
Sbjct: 159 AAGLRHAVAATASGIVFQWGTGLASCGRRLCPG-QTLPLFFTAKEPSRVTGLENSKAMCV 217
Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
AG +H +L +G VY WG G L + LP P +++H C + K
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF---LPVP-QKIEAH-----CFQNEKVT 268
Query: 276 VL----------VDTGSVYGFGWMGFGSLG 295
+ +TG ++ +G +G LG
Sbjct: 269 AIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 2 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 58
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIEL-HKEKVVCIAAG 161
Query: 59 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 111
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 170
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 171 VTGNGVVYSFGSGSNFCLGHG---------EQHDEL-----QPRAIQTFRRKGIHVVRVS 216
T G ++++G LG E+ D P ++ + VS
Sbjct: 280 QTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVS 339
Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 261
G EH +A+ G Y+WG G G G E + P+P+ +L S
Sbjct: 340 CGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLS 383
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 247
LG G + D L P+ + F K V R++ G H + G ++ G G LG G
Sbjct: 28 LGLGHKEDVLLPQQLNDFC-KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHT 86
Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
D P SL QV T +L + G V G FG LG P + +
Sbjct: 87 EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG--PRRCVV 144
Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
P+ ++ L V I+ GL H V T G +F +G
Sbjct: 145 PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 33/228 (14%)
Query: 20 SCGSSLCGVLGHGPETTQCVSFT-----RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 74
SCG LC P T + FT R+ + + V A +H+A + +G+V+
Sbjct: 183 SCGRRLC------PGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 236
Query: 75 GDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 132
G N + P+ P+ +EA + + +G T G + T G +
Sbjct: 237 GSNKHGQLANEAAFLPV--PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 133 GQLGHG---------DTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGVV 177
GQLG + D P S P S +++ G + LA+ G GV
Sbjct: 295 GQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVC 353
Query: 178 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
YS+G + G G + + P+ +Q +V AG H +AL
Sbjct: 354 YSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG--HSLAL 399
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 33/348 (9%)
Query: 9 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 68 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 128 GSNTHGQLGH---GDTLDRPT---------PKSIAPLEE---------VGSVV--QIAAG 164
G +GQLGH G + R P+ +A E V +VV +A G
Sbjct: 252 GCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACG 311
Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G + A
Sbjct: 312 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFA 371
Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
L G ++ WG + + P+ + L + K V D ++
Sbjct: 372 LSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTIS 425
Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 332
FG LG+ D + +L + Q+ G H++V+
Sbjct: 426 WGPSPTFGELGYGDNKPKSSTTAQEV-KTLDGVYSEQVVMGYSHSLVI 472
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 280
H + + + G +++WG+ G LGHGD P+ + L + V + T L +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 340
G+VY FG G LG ++ +D VL P + + +++ G +++V +G L+
Sbjct: 194 GTVYTFGENKLGQLGQGNQ--TDAVLSPATI-QYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 341 FGDNERAQLGHDT 353
FG E QLGH++
Sbjct: 251 FGCPEYGQLGHNS 263
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 161 IAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 218
+ +GP ++ L +T G ++S+G LGHG+ P+ I+ + I V + G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVI--VAAACG 183
Query: 219 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 278
H +AL +G VYT+G+ G LG G++ D L V+V + ++
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVD 243
Query: 279 DTGSVYGFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHHV------ 319
G++Y FG +G LG G D L PR ++ + V
Sbjct: 244 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNV 303
Query: 320 --SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
++ G HT+V+ + R+F +G +LGH + + P
Sbjct: 304 VARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 129/292 (44%), Gaps = 20/292 (6%)
Query: 16 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 76 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 134
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 135 LGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCL 188
LG R P++I L E VV IAAG + LA T +G V+ +G SG C
Sbjct: 133 LGVPHGPRRCVIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCP 190
Query: 189 GHGEQHDELQPRAIQTFRRKGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 245
G Q L A + G+ V V AG +H +L +G +Y WG G L
Sbjct: 191 G---QTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQ 247
Query: 246 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
LP+ + + ++ V + TG V+ +G +G LG
Sbjct: 248 AAF-LLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 26/259 (10%)
Query: 106 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSIAPLEEVGSVVQIA 162
K++T G + +T G + CG N GQLG G T + TP KS+ ++ Q+A
Sbjct: 52 KRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGC----AIQQVA 107
Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
G + + +T NG V S GS S LG HG + + P+AI+ R K VV ++AG
Sbjct: 108 CGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI-PQAIELLREK---VVSIAAGLR 163
Query: 221 HVVALDSSGYVYTWGKGYCGA---LGHGDEIDKTL----PEPLSSLKSHLAVQVCARKRK 273
H +A +SG V+ WG G + L G + L P ++ L++ AV V A
Sbjct: 164 HALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDH 223
Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTVV 331
+ L D G +Y +G G L + +L P+ +++ + ++ + +G H V
Sbjct: 224 SASLTDAGELYVWGSNKHGQLA----SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVA 279
Query: 332 VTDRGRLFGFGDNERAQLG 350
T G++F +G + QLG
Sbjct: 280 QTVTGKVFTWGRADYGQLG 298
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 120/293 (40%), Gaps = 33/293 (11%)
Query: 1 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 57
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIELLRE-KVVSIAA 160
Query: 58 SENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQV 108
HA SG VF G C G P+F P V L+ V
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQ---TLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 109 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
AG + + LT G ++ GSN HGQL + A + + + +G +++
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHL 277
Query: 169 LAVTGNGVVYSFGSGSNFCLG------HGEQHDELQPRAIQTFRRKGIH--------VVR 214
+A T G V+++G LG G + ++ P + +KG
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATE 337
Query: 215 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 267
+S G EH +A+ G ++WG G G G E D P+P+ L+ L + V
Sbjct: 338 ISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHV 389
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 151/371 (40%), Gaps = 40/371 (10%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 60
+IT G H+ ++++ S+F CG + G LG G T + + FT + QV+ +
Sbjct: 53 RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTPCKSLLGCAIQQVACGWD 111
Query: 61 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 120
+ ++GQV +CG NS G R P+ +E L+ + AGL T
Sbjct: 112 FTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATA 170
Query: 121 RGHVHTCG---SNTHGQLGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 173
G V G +++ +L G TL P ++ LE +V + AG + ++T
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVC-VLAGSDHSASLTD 229
Query: 174 NGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 229
G +Y +GS HG+ + L P+ I+ + + V +G H+VA +G
Sbjct: 230 AGELYVWGSNK-----HGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTG 284
Query: 230 YVYTWGKGYCGALG---------HGDEIDKTLP--EPLSSLKSHL-----AVQVCARKRK 273
V+TWG+ G LG ++ D +LP P S L A ++
Sbjct: 285 KVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEH 344
Query: 274 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
++ G + +GW G G G V P+ + LR + G H++ +
Sbjct: 345 NLAVIG-GVCHSWGWNEHGMCG---DGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Query: 334 DRGRLFGFGDN 344
L G +
Sbjct: 401 QLPALPALGQH 411
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 165 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 224
P AV ++++G+ S LG G + D L + + F + G + R++ G H
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAV 63
Query: 225 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 284
+ G ++ G G LG G + P SL QV T +L + G V
Sbjct: 64 VTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 285 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 342
G FG LG P + + P+ ++ LR VS I+ GL H + T G +F +G
Sbjct: 124 SCGSNSFGQLGVPHG--PRRCVIPQAIELLREKVVS-IAAGLRHALAATASGTVFQWG 178
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 128 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 187
G+N++GQLG G D + + ++ + G + +I G + VT G ++ G +
Sbjct: 21 GANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQ 80
Query: 188 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HG 245
LG G + L ++ G + +V+ G + + L +G V + G G LG HG
Sbjct: 81 LGLGHTEEVLYFTPCKSLL--GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHG 138
Query: 246 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 305
+P+ + L+ + V + A R +G+V+ +G G S G R +
Sbjct: 139 PR-RCVIPQAIELLREKV-VSIAAGLRHALAATASGTVFQWG-TGLASSG--RRLCPGQT 193
Query: 306 L-------RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
L P + L + G H+ +TD G L+ +G N+ QL
Sbjct: 194 LPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQL 244
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 159/381 (41%), Gaps = 49/381 (12%)
Query: 18 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 78 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFTGFLTIRGHVHTCGS 129
G RDT+ VE + VP K QV+AG + T LT G V GS
Sbjct: 95 DEGALG-RDTS--------VEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS 145
Query: 130 --NTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 184
+ +G +G L P KS+ P++ +V VV++A+G +++ +T +G +Y+ G G
Sbjct: 146 FRDNNGVIG----LLEPMKKSMVPVQVQLDV-PVVKVASGNDHLVMLTADGDLYTLGCGE 200
Query: 185 NFCLGH---------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGY 230
LG G Q E L P+ + R VR G A+ G+
Sbjct: 201 QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 260
Query: 231 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGW 288
VY +G LG +P+ L+S K+ V + T + G Y G
Sbjct: 261 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 289 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 348
+G LG + G +K + P ++ L A VS ++ G VT GR+F +G Q
Sbjct: 321 AEYGRLGLGE-GAEEKSI-PTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQ 376
Query: 349 LGHDTLRGCLEPTEIFIQEME 369
LG P E+ +++E
Sbjct: 377 LGTGQDEDAWSPVEMMGKQLE 397
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 26/260 (10%)
Query: 122 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 181 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 236
G LG + E+ P ++ + VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTDDGRVFLWGSFR 147
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 295
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 296 ----FPDRGVS---DKVLRPR--ILDSL--RAHHVSQIS-TGLYHTVVVTDRGRLFGFGD 343
F +RG +++L P+ +L S R H Q + G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
Query: 344 NERAQLGHDTLRGCLEPTEI 363
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTESCFIPQNL 286
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 145/358 (40%), Gaps = 39/358 (10%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q G HT+ +S S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 112
+H A + G+VF G SF RD N P+ + + V+ VP +V +G
Sbjct: 129 SHTAALTDDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGN 181
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 162
+ LT G ++T G GQLG L+R L+ GS +
Sbjct: 182 DHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVR 241
Query: 163 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
G + A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSG 301
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
G H V +DS G Y+ G+ G LG G+ +K++P +S L + +V A +
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGA--SVGYA 359
Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 332
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VTKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 172 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 231
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 88
Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 291
Y++G GALG ++ + P VQV A T L D G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGSF 146
Query: 292 ----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 347
G +G + V LD V ++++G H V++T G L+ G E+
Sbjct: 147 RDNNGVIGLLEPMKKSMVPVQVQLDV----PVVKVASGNDHLVMLTADGDLYTLGCGEQG 202
Query: 348 QLGH 351
QLG
Sbjct: 203 QLGR 206
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPADAIPKSKKVKVSHRSHST----EPGLVLTLGQGDVGQLGLGENVMERK--K 59
Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 365
P ++ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 366 QE 367
QE
Sbjct: 118 QE 119
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 78.2 bits (191), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-GIHVVRVS 216
+V I+ G + +T G +Y+FG G LGHG P+ ++ F+ K + VV ++
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 217 AGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLA--------- 264
G +H +AL G VY+WG LG G+ +LP+ ++ S+
Sbjct: 250 NGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNS 309
Query: 265 -------------------------------VQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
V++ ++ V+ D G ++ FG G
Sbjct: 310 TNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGR 369
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
LG ++ + + P+++ SL+ H + +S+G H++V+T++G +F FG N++ QLG
Sbjct: 370 LGLGEQSLLMQS-TPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGP 165
++ G + F+T +G+++T G G+LGHG+ +PK + + S VV IA G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 166 SYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFR---------------- 206
+ LA+T G VYS+G G++ C LG+G + F
Sbjct: 253 KHSLALTICGKVYSWG-GNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTN 311
Query: 207 -----------------------RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 243
I +V++S G + G ++T+G+G G LG
Sbjct: 312 NNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG 371
Query: 244 HGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPD 298
G++ + ++ P+ + SL+ H + + + + VL + G V+ FG G LG F +
Sbjct: 372 LGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSN 431
Query: 299 RGVSDKVLRPRILDSLRAH---HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 350
+ K ++ + ++ ++S G YH++ ++D + +G ++ LG
Sbjct: 432 QQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRV 215
+V+++ G + +T G++++FG G + LG GEQ +Q P+ +Q+ +G ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSL--QGHFIIDM 397
Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLA--------VQ 266
S+G H + L + G V+++G+ G LG G +T+P+ + ++ ++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVS--QI 322
V A + + D Y +G +G LG D+ L P ++ +S+ +V +
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL-PVLINSNSVVVDNVKFIDV 516
Query: 323 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
S+G H V ++ G L+ +G N +LG + L P + FI +
Sbjct: 517 SSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSKD 563
Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
+V++S N +A + G +FT G D+ G + P+LV++L+G ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS-TPKLVQSLQGHFIIDMS 398
Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVG-------SVVQI 161
+G + LT +G V + G N GQLG G ++ T PK I + +++++
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 162 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAI--QTFRRKGIHVVRVSA 217
+AG + +A++ N Y++G LG Q D P I + + + VS+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 254
G +H VA+ G +Y+WG LG + ++ P+
Sbjct: 519 GFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK 555
Score = 39.7 bits (91), Expect = 0.041, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 28 VLGHGPETTQCVSFTRINFP---SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 84
+ G+G + + + I F + +V +S H++F+ G ++T GD GH
Sbjct: 163 IWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
Query: 85 RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 139
+ P+LVE + P +V + G + LTI G V++ G N QLG G+
Sbjct: 223 GNL-ESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 38.5 bits (88), Expect = 0.086, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 322 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
ISTG H+ +TD+G L+ FGD +LGH L P
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSP 231
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 145/351 (41%), Gaps = 37/351 (10%)
Query: 9 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 65
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 66 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 125
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 126 TCGSNTHGQLGH---GDTLDRP---------TPKSIAPLEE---------VGSVV--QIA 162
+ G +GQLGH G + R P+ +A E V +VV +A
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 163 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 222
G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 223 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 282
A+ G ++ W GA E P+ + L + K V D +
Sbjct: 397 FAVSEVGGLFFW-----GATNTSRE-STMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 450
Query: 283 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
+ FG LG+ D + +L Q++ G H++V+
Sbjct: 451 ISWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 500
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 209 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
G+ V V +G H + + + G +++WG+ G LGHGD P + L + V
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVS 206
Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 326
+ T L +TGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACGA 263
Query: 327 YHTVVVTDRGRLFGFGDNERAQLGHDT 353
++++ +G L+ FG E QLGH++
Sbjct: 264 EFSMIMDCKGNLYSFGCPEYGQLGHNS 290
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI--VSAACGRNHTLAL 217
Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 284
+G V+ +G+ G LG G++ D +P P + + + A + +++D G++Y
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 285 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 323
FG +G LG G D L PR ++ + V ++
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
G HT+V+ + R+F +G +LGH + + P
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 136/357 (38%), Gaps = 49/357 (13%)
Query: 9 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 61
H+LLI+ ++S G + G LGHG RI+ P V + NH
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHG-------DIKRIDVPKLIESLKGEVFVHAACGRNH 204
Query: 62 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 121
+ ++G V+ G+N G + + P + G P +V G F+ + +
Sbjct: 205 TLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDCK 263
Query: 122 GHVHTCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGS 157
G++++ G +GQLGH +++ I P+ V
Sbjct: 264 GNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNV-V 322
Query: 158 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
V IA G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ A
Sbjct: 323 VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYA 382
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFV 276
G A+ G ++ WG D T+ P+ + L + K V
Sbjct: 383 GATCSFAVSEMGGLFFWG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435
Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
D ++ FG LG+ D + +L + Q+ G HT+VV
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEV-KTLDGIYSDQVIMGNSHTLVVA 491
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 209 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
G+ V V++G H + + G +++WG+ G LGHGD +P+ + SLK + V
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVH 197
Query: 267 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTG 325
+ T L + GSVY FG G LG ++ +D V P +IL +++++ G
Sbjct: 198 AACGRNHTLALTENGSVYAFGENKMGQLGLGNK--TDAVPSPAQIL--YNGQPITKVACG 253
Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDT 353
++++ +G L+ FG E QLGH++
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNS 281
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 158 VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 215
V +A+G ++ L +T G ++S+G LGHG+ P+ I++ KG V
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESL--KGEVFVHA 198
Query: 216 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 275
+ G H +AL +G VY +G+ G LG G++ D +P P L + + A +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD-AVPSPAQILYNGQPITKVACGAEFS 257
Query: 276 VLVD-TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRAHH------ 318
+++D G++Y FG +G LG G +++ RI +
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILP 317
Query: 319 -----VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
V I+ G+ H++++ + R+F +G +LGH R + P
Sbjct: 318 VPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 299 RGVSDKVLRPRILDSLRAHHVSQISTG--LYHTVVVTDRGRLFGFGDNERAQLGHDTLR 355
R + + P L V +++G H++++T G+L+ +G N++ QLGH ++
Sbjct: 121 RNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIK 179
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 136/350 (38%), Gaps = 35/350 (10%)
Query: 9 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 67
H+LLI+ ++S G + G LGHG +T + + I S +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD 217
Query: 68 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 127
+G VF G+N G + + P + G P ++ G F+ + +G++++
Sbjct: 218 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSF 276
Query: 128 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 163
G +GQLGH +++ I P+ V V +A
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDVAC 335
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSF 395
Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
A+ G ++ WG + P+ + L + K V D ++
Sbjct: 396 AVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 449
Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 333
FG LG+ D + +L Q++ G H++V+
Sbjct: 450 SWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 498
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 209 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 266
G+ V V +G H + + + G +++WG+ G LGHGD P + +L SH A+
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEAL-SHEAIV 203
Query: 267 VCARKRK-TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 325
+ A R T L DTGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 204 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACG 260
Query: 326 LYHTVVVTDRGRLFGFGDNERAQLGHDT 353
++++ +G L+ FG E QLGH++
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 166 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLAL 215
Query: 226 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 284
+G V+ +G+ G LG G++ D +P P + + + A + +L+D G++Y
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 285 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 323
FG +G LG G D L PR ++ + V ++
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 360
G HT+V+ + R+F +G +LGH + + P
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 140/346 (40%), Gaps = 45/346 (13%)
Query: 70 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTC 127
+V +CG+ + R T + +PR V+ + G+ Q AG + LT G V+ C
Sbjct: 153 RVLSCGEGEALGHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
Query: 128 GSNTHGQL------GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 181
G N G + G T + K +E+ G +V +AAG S+ A+T G V ++G
Sbjct: 210 GINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWG 269
Query: 182 SGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 238
+ N G+ + H ++Q + + +V+++AG+ H+V LD G + T+G G
Sbjct: 270 NLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGE 328
Query: 239 CGALGHG------------DEIDKTLPEPLS-----SLKSHLAVQVCARKRKTFVLVDTG 281
G LG DE L PL +A V A T V + G
Sbjct: 329 MGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDG 388
Query: 282 SVYGFGWMGFGSLGFP-------DRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVV 331
Y FG + LG G ++ LR P + A G+ H V+
Sbjct: 389 KYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVI 448
Query: 332 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF---IQEMEEDTGL 374
+ G++F G N LG G + IQE+E D+ +
Sbjct: 449 LGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKI 494
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 22/237 (9%)
Query: 126 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
T S + L T R K +APL + PS + G+ V+ S G G
Sbjct: 113 TINSTMNSTLNEPKTPGRKQAKLVAPL-----LTYDLFAPS----IIGDRVL-SCGEGE- 161
Query: 186 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL--- 242
LGH + +PR + F +G+ ++ AG H L S G VY G G +
Sbjct: 162 -ALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAE 220
Query: 243 -----GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 297
G DE K E + + V + A T L D GSV +G + +
Sbjct: 221 GVEKEGSTDEFAKVKFEEDIEKEGKI-VMLAAGASFTAALTDQGSVIAWGNLRNSNGNVD 279
Query: 298 DRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
+ K+ P ++ + +I+ G H V++ ++G L FGD E QLG +
Sbjct: 280 VHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 146/386 (37%), Gaps = 56/386 (14%)
Query: 1 MQITTGRYHT-LLISNSSVFSCGSSLCG-VLGHGPETTQCV-SFTRINFPS----AAHVV 53
+Q G H+ +L S V+ CG + G V G E F ++ F +V
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIV 247
Query: 54 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEALKGVPCKQVT 109
++A + A + G V G N G+ D + + + P ++ ++
Sbjct: 248 MLAAGASFTAALTDQGSVIAWG-NLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIA 306
Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---------DRPTPKSIAPL--EEVGSV 158
AG N L +G + T G GQLG D + PL + G
Sbjct: 307 AGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKF 366
Query: 159 VQIAA----GPSYMLAVTG-NGVVYSFGSGSNFCLG----------HGEQHDELQ---PR 200
+ A + V G +G Y+FG + LG G+ + EL+ P
Sbjct: 367 FDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPA 426
Query: 201 AIQTF--RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-----DEIDKTLP 253
F R +++ G +HVV L S G V+ GK ALG G D+ L
Sbjct: 427 EAPAFGAERTFVNI----EGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLY 482
Query: 254 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-RPRIL 311
+ + ++ V V A+ + + G+ Y +G+ G LG + +K++ +P +
Sbjct: 483 DTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEI 542
Query: 312 DS--LRAHHVSQISTGLYHTVVVTDR 335
S L + + S HT+++ +
Sbjct: 543 SSAHLDGYSIIGASISDQHTLIIAKK 568
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 60/300 (20%)
Query: 2 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 58
+I G++H+ I S+ S+++ G + G LGHG + Q V TR+N V Q++
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP-TRVN-GLICKVTQIACG 888
Query: 59 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-----CKQVTAGLN 113
H + +G+V CG S G D + +F A +P + +
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVF------AFTPLPLGPLRVRDIATHYY 942
Query: 114 FTGFLTIRGHVHTCGSNTH--------------GQLGHGDTLDRPTPKSIA--------- 150
+ +T V G N QL + + P+P +
Sbjct: 943 HSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNL 1002
Query: 151 ----PLEEVG----------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 196
P E++G ++V +A G S+ +T G +Y++G G ++ LGHG +++
Sbjct: 1003 PAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER 1062
Query: 197 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGAL--GHGDEIDKT 251
++P Q F G V VS G+ H +A G V+ WGK G CG L +G+ D T
Sbjct: 1063 MEPH--QVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVT 1120
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 115/289 (39%), Gaps = 55/289 (19%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCK--Q 107
+ +++ + H+AF+ G ++T G GH R+ + + R+ G+ CK Q
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV----NGLICKVTQ 884
Query: 108 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAG 164
+ G T LT G V CGS ++GQ+G D + + TP + PL V IA
Sbjct: 885 IACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR----VRDIATH 940
Query: 165 PSYMLAVTGNGVVYSFG----------------------------------SGS----NF 186
+ + +T + V+ +G +GS N
Sbjct: 941 YYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNL 1000
Query: 187 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 246
L ++L R ++ F I V V+ G H + S G +YTWGKG LGHG+
Sbjct: 1001 NLPAEIPREDLGLREVKHFLDGNI--VSVACGLSHSALITSEGTLYTWGKGLDYQLGHGN 1058
Query: 247 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 295
+ ++ P + V V T D GSV+ +G FG G
Sbjct: 1059 KNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 161 IAAGPSYMLAVTGNGVVYSFGSGSNF--C-LGHGEQHDELQPRAIQTFRRKGIHVV---- 213
IA G ++L ++ +G + ++G G+ F C +GH +FR +H V
Sbjct: 781 IACGAEHILVLSSSGQLSAWG-GNRFGQCGVGH-------------SFRIANLHQVDGDW 826
Query: 214 ----RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQV 267
+++ G H + S G ++T+G G G LGHG + ++ +P ++ L +
Sbjct: 827 PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIA 886
Query: 268 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 327
C R T VL DTG V G +G +G D P L LR V I+T Y
Sbjct: 887 CGRAH-TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYY 942
Query: 328 HTVVVTDRGRLFGFGDN 344
H++ +T+ R+F +G N
Sbjct: 943 HSICITEDNRVFEWGRN 959
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 123/312 (39%), Gaps = 51/312 (16%)
Query: 94 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 153
PR++E G P + + G L+ G + G N GQ G G + IA L
Sbjct: 768 PRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLH 820
Query: 154 EVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 209
+V ++ +IA G + + +G +++FG G LGHG +++ Q + R G
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQ---LVPTRVNG 877
Query: 210 I--HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLK---- 260
+ V +++ G H V L +G V G G G +G D+I K P PL L+
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI 937
Query: 261 -SHLAVQVCAR---------------KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 304
+H +C K + FV+ S S G + +
Sbjct: 938 ATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPR 997
Query: 305 V------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
V L R + ++ ++ GL H+ ++T G L+ +G QLGH
Sbjct: 998 VNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Query: 353 TLRGCLEPTEIF 364
+EP ++F
Sbjct: 1058 NKNERMEPHQVF 1069
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 1 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+ + G H+ LI S ++++ G L LGHG + + + ++ P+ A V VS
Sbjct: 1025 VSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER-MEPHQVFEPNGAKWVNVSLGN 1083
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCG 83
NH G VF G N CG
Sbjct: 1084 NHTIASTDDGSVFAWGKNDFGQCG 1107
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 29/335 (8%)
Query: 51 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 104
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 163
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVAC 456
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
G S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSM 514
Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA---VQVCARKRKTFVLVDT 280
L S G V G LG P P ++ L+ + ++ + VD
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 281 GSV-----------YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 329
G+ Y FG G LG R VS R + L+ ++ + ++ G T
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK---MVMVACGDAFT 631
Query: 330 VVVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 363
V V G ++ +G R +LG D G P ++
Sbjct: 632 VAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQL 666
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 158 VVQIAAGPSYMLAVTGNGVVY-----SFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 210
VVQ+AAG + VT +G + G+G L + QP+ + F + G+
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELP--QPQFVSRFLEGQSGV 397
Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 270
+ V+ GD L G + T+G G G LGHG+ D + P + +L + VQV
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 271 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 330
L G ++ +G G LG R + P+ + ++ G+ ++
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC---PQQVPVAPGQEAQRVVCGIDSSM 514
Query: 331 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 370
++T GR+ G N +LG D L EP + Q++EE
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEP--VPYQQVEE 552
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
+H + + G V T G G ++ +P LV L+ V Q AG T L+
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLS 83
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 180 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
+GS +N +G E + P +Q VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DAPVVKVASGNDHLVMLTNDGDLYTLGC 198
Query: 237 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 280
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE 258
Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 338
G VYGFG + LG P G P+ L S + S + S G +HTV + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPGTG---SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 339 FGFGDNERAQLG 350
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 26/260 (10%)
Query: 122 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
G V T G GQLG G++ L+R P + L++V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLSQSGQVYSF 91
Query: 181 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 236
G LG + E+ P ++ + VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 295
G +G + + K++ P+ V+V + +L + G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGR 206
Query: 296 ----FPDRGVSD---KVLRPR-ILDSLRAHH----VSQISTGLYHTVVVTDRGRLFGFGD 343
F +RG ++L PR +L R G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGL 266
Query: 344 NERAQLGHDTLRGCLEPTEI 363
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTGSCFIPQNL 286
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 154/380 (40%), Gaps = 47/380 (12%)
Query: 18 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 78 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFTGFLTIRGHVHTCGS 129
G RDT+ VE + VP K QV+AG + T LT G V GS
Sbjct: 95 DEGALG-RDTS--------VEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 130 --NTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
+ +G +G L P KS+ P++ VV++A+G +++ +T +G +Y+ G G
Sbjct: 146 FRDNNGVIG----LLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQ 201
Query: 186 FCLGH---------GEQ--HDELQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYV 231
LG G Q L PR + R VR G A+ G+V
Sbjct: 202 GQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHV 261
Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWM 289
Y +G LG +P+ L+S K+ V + T + G Y G
Sbjct: 262 YGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRA 321
Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
+G LG + G +K + P ++ L VS ++ G V+ GR+F +G QL
Sbjct: 322 EYGRLGLGE-GAEEKSI-PTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQL 377
Query: 350 GHDTLRGCLEPTEIFIQEME 369
G P E+ +++E
Sbjct: 378 GTGQDEDAWSPVEMTGKQLE 397
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 143/358 (39%), Gaps = 39/358 (10%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q G HT+ +S S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLSQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 112
+H A + + G+VF G SF RD N P+ + + V+ P +V +G
Sbjct: 129 SHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGN 181
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 162
+ LT G ++T G GQLG L R L+ G+ ++
Sbjct: 182 DHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVR 241
Query: 163 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
G + A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSG 301
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
G H V +DS G Y+ G+ G LG G+ +K++P +S L + V +
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYA 359
Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 332
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHNT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 365
P ++ L+ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 366 QE 367
QE
Sbjct: 118 QE 119
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 119
+H + + G V T G G ++ +P LV L+ V Q AG T L
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLN 83
Query: 120 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 179
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 180 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 236
+GS +N +G E + P +Q + VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 237 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 280
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISRE 258
Query: 281 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 338
G VYGFG + LG P + P+ L S + S + S G +HT+ + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPG---TASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKA 315
Query: 339 FGFGDNERAQLG 350
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 155/380 (40%), Gaps = 47/380 (12%)
Query: 18 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 77
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLNQSGQVYSFGCN 94
Query: 78 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFTGFLTIRGHVHTCGS 129
G RDT+ VE + VP K QV+AG + T LT G V GS
Sbjct: 95 DEGALG-RDTS--------VEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 130 --NTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 185
+ +G +G L P KS+ P++ VV++A+G +++ +T +G +Y+ G G
Sbjct: 146 FRDNNGVIG----LLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQ 201
Query: 186 FCLGH---------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYV 231
LG G Q E L P+ + R VR G A+ G+V
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHV 261
Query: 232 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWM 289
Y +G LG +P+ L+S K+ V + T + G Y G
Sbjct: 262 YGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 321
Query: 290 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 349
+G LG + G +K + P ++ L VS ++ G V+ GR+F +G QL
Sbjct: 322 EYGRLGLGE-GAEEKSI-PTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQL 377
Query: 350 GHDTLRGCLEPTEIFIQEME 369
G P E+ +++E
Sbjct: 378 GTGQDEDAWSPVEMTGKQLE 397
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 122 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 180
G V T G GQLG G++ L+R P + L++V VQ AG + + + +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLNQSGQVYSF 91
Query: 181 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 236
G LG + E+ P ++ + VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 237 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 295
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 296 ----FPDRGVS---DKVLRPR--ILDSLRAHHVSQIST---GLYHTVVVTDRGRLFGFGD 343
F +RG +++L P+ +L S + + G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGL 266
Query: 344 NERAQLGHDTLRGCLEPTEI 363
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTASCFIPQNL 286
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 144/358 (40%), Gaps = 39/358 (10%)
Query: 1 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 59
+Q G HT+ ++ S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLNQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 60 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 112
+H A + + G+VF G SF RD N P+ + + V+ +P +V +G
Sbjct: 129 SHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGN 181
Query: 113 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 162
+ LT G ++T G GQLG L+R L+ GS ++
Sbjct: 182 DHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVR 241
Query: 163 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 217
G A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSG 301
Query: 218 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 276
G H + +DS G Y+ G+ G LG G+ +K++P +S L + V +
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYA 359
Query: 277 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 332
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 248 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 307
I K P ++ V+V R KT + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHKT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 308 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 365
P ++ L+ V Q G HTV + G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 366 QE 367
QE
Sbjct: 118 QE 119
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
P P PL V Q+ G ++L + G V+S+G+G + LGHG EL+PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 263
+G+ + +V+AG H V L +G +Y WG G L +L +
Sbjct: 209 AL--QGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL---------------ALPTRS 251
Query: 264 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 323
+ A + + L + G + G P ++ + P +LD S
Sbjct: 252 GTENKAEREEATELNEDGLKEE---LAVADAGAPAHFIAIQPF-PALLDLPLGSDAVMAS 307
Query: 324 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQEMEE 370
G HT VVT G L+ +G + QLGH P E F++ E
Sbjct: 308 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLE 356
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 52 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
V Q+ H + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH-GTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 168
+ L+ G ++ G N GQL T ++ + L E G ++A
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELA------ 275
Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
V G+ ++F +QP G V S G H + +
Sbjct: 276 --------VADAGAPAHFIA--------IQPFPALLDLPLGSDAVMASCGSRHTAVVTRT 319
Query: 229 GYVYTWGKGYCGALGHGDEIDKTLP 253
G +YTWG G G LGH D P
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRP 344
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 275 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 334
+L G V+ +G G LG G + L PR+L++L+ +++++ G +H+V +++
Sbjct: 174 LLLCAAGQVFSWGAGRHGQLG---HGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSE 230
Query: 335 RGRLFGFGDNERAQLGHDTLRGC------LEPTEIFIQEMEEDTGLA 375
G ++ +G NE QL T G E TE+ ++E+ +A
Sbjct: 231 TGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 122/320 (38%), Gaps = 52/320 (16%)
Query: 51 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 104
VVQV+A A V +SG++ S G + +P F R +E GV
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 105 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 163
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LGYEMVQVAC 450
Query: 164 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 223
G S++LA++ ++++G G + LG G + P+ Q G RV G + +
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCGIDSSM 508
Query: 224 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 283
L G G LG P P ++ L +F L+ +
Sbjct: 509 ILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL----------SFTLLGSA-- 556
Query: 284 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 343
L + I G H+ VT G + FG
Sbjct: 557 -----------------------------PLDQEPLLSIDLGTAHSAAVTASGDCYTFGS 587
Query: 344 NERAQLGHDTLRGCLEPTEI 363
N+ QLG +T RG P ++
Sbjct: 588 NQHGQLGTNTRRGSRAPCKV 607
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 19/254 (7%)
Query: 112 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 170
L T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L
Sbjct: 32 LELPKRRTVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLV 88
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 228
+T +G +YSFG LG D E +P I + + +SAGD H L
Sbjct: 89 LTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGK----ALCISAGDSHSACLLED 144
Query: 229 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 288
G V+ WG G ID P+ ++ + + + +L G V+ G
Sbjct: 145 GRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGC 204
Query: 289 MGFGSLG-FPDRGVSDK-------VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LF 339
G LG +R +S + +LRP L RA I Y T + + + ++
Sbjct: 205 AEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIW 264
Query: 340 GFGDNERAQLGHDT 353
G N QL H+T
Sbjct: 265 ATGLNNFKQLAHET 278
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 3 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT----------QCVSFTRINFPSAAH 51
I +G H ++++ + VF+ G + G LG E + + T++ A
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 52 VVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 109
+ A+ N+ F+ +S ++ G N+ H + + LK + + +
Sbjct: 243 FEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI--RHIA 299
Query: 110 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYM 168
G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 300 GGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCGEVCS 357
Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 225
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H + L
Sbjct: 358 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 144/367 (39%), Gaps = 44/367 (11%)
Query: 17 SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 75
+V CG+ G LG G + + + + P A V +SA H + +SG +++ G
Sbjct: 43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDA---VDISAGGMHNLVLTKSGDIYSFG 99
Query: 76 DNSSFCCGHRDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NT 131
N G RDT+ +P L++ C ++AG + + L G V GS ++
Sbjct: 100 CNDEGALG-RDTSEDGSESKPDLIDLPGKALC--ISAGDSHSACLLEDGRVFAWGSFRDS 156
Query: 132 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 190
HG +G ++ TP L E IA+G +++ +T G V++ G LG
Sbjct: 157 HGNMGLTIDGNKRTP---IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 191 ------GE----QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 240
GE + D L+P + R K + + + + S W G
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT---NYCTFMRESQTQVIWATGLNN 270
Query: 241 --ALGH---GDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGS 293
L H G E L+ +K+ L + + T +L G +G
Sbjct: 271 FKQLAHETKGKEF------ALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGR 324
Query: 294 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 353
LG D V D V +P I+ L VS + G + VT G+L+ +G QLG
Sbjct: 325 LGLGD--VKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD 381
Query: 354 LRGCLEP 360
LEP
Sbjct: 382 GDDELEP 388
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 171 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 229
V GNG V G G + + L P A GI V +SAG H + L SG
Sbjct: 46 VCGNGDVGQLGLGEDIL-----ERKRLSPVA-------GIPDAVDISAGGMHNLVLTKSG 93
Query: 230 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 289
+Y++G GALG D + +P A+ + A + L++ G V F W
Sbjct: 94 DIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRV--FAWG 151
Query: 290 GF----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 345
F G++G G + +D + I++G H V++T G++F G E
Sbjct: 152 SFRDSHGNMGLTIDGN-----KRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAE 206
Query: 346 RAQLGHDTLRGC-----------LEPTEIFI 365
+ QLG + R L PT++ I
Sbjct: 207 QGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 23/266 (8%)
Query: 3 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 61
I+ G H+ L+ + VF+ GS G+ T T I+ +++ +H
Sbjct: 131 ISAGDSHSACLLEDGRVFAWGS-FRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADH 189
Query: 62 AAFVLQSGQVFTCG----------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 111
+ +G+VFT G S R R + RP + + P + + A
Sbjct: 190 LVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWA- 248
Query: 112 LNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYM 168
N+ F+ + + G N QL H +T + ++ P++ E+ + IA G +
Sbjct: 249 TNYCTFMRESQTQVIWATGLNNFKQLAH-ETKGKEF--ALTPIKTELKDIRHIAGGQHHT 305
Query: 169 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDS 227
+ +T + G LG G+ D ++ P ++ K +V V G+ A+
Sbjct: 306 VILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEK---IVSVGCGEVCSYAVTI 362
Query: 228 SGYVYTWGKGYCGALGHGDEIDKTLP 253
G +Y+WG G LG GD D+ P
Sbjct: 363 DGKLYSWGSGVNNQLGVGDGDDELEP 388
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
+ ++ G EH + LD++G V++WG G G LGHG + P L +L+ + +V A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-----------------KVLR----- 307
+ + +TG +Y +GW G L P R +++ +V R
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAE 277
Query: 308 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
P +LD + S G HT VVT G L+ +G + QLGH+
Sbjct: 278 DGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 151 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 210
PL Q+ G + L + G V+S+G G + LGHG EL+PR ++ +G+
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL--QGL 210
Query: 211 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG----------------------HGDEI 248
+ V+AG H V + +G +Y WG G L G ++
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQV 270
Query: 249 DKT------LPEPLSSLKSHLA----------VQVCARKRKTFVLVDTGSVYGFGWMGFG 292
+T P P +++ A V+ R T V+ TG +Y +GW +G
Sbjct: 271 KRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYG 330
Query: 293 SLGFPDRGVSDKVLRPRILDSL--RAHHVSQISTGLYHT-VVVTDRGR 337
LG D D RPR ++ + V ++ G ++T V ++G+
Sbjct: 331 QLGHEDTTSLD---RPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 44/206 (21%)
Query: 54 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 114 FTGFLTIRGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAG- 164
+ ++ G ++ G N GQL G+T+ R + L E GS V+ G
Sbjct: 221 HSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATE----LNEDGSQVKRTGGA 276
Query: 165 ----PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
P+ +AV + GS+ V+ S G
Sbjct: 277 EDGAPAPFIAVQPFPALLDLPMGSD--------------------------AVKASCGSR 310
Query: 221 HVVALDSSGYVYTWGKGYCGALGHGD 246
H + +G +YTWG G G LGH D
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHED 336
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 255 PLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
P + LA ++ AR+ + +L G V+ +G G LG G + L PR
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPR 202
Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 369
+L++L+ +++++ G +H+V V++ G ++ +G NE QL T R E E +E
Sbjct: 203 LLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT-RNLAEDGETVAREAT 261
Query: 370 E 370
E
Sbjct: 262 E 262
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 69/184 (37%), Gaps = 43/184 (23%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 59
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 60 NHAAFVLQSGQVFTCGDNSS--------------------------------FCCGHRDT 87
H+ V ++G ++ G N S G D
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 88 NRPIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-- 140
F P L++ G + + G T +T G ++T G +GQLGH DT
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 141 LDRP 144
LDRP
Sbjct: 340 LDRP 343
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 44 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--K 101
++ P + V+ S H A V ++G+++T G GH DT + RPR VE K
Sbjct: 294 LDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDRPRRVEYFVDK 352
Query: 102 GVPCKQVTAG 111
+ K VT G
Sbjct: 353 QLQVKAVTCG 362
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 210 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 269
+ ++ G EH + LD++G V++WG G G LGHG + P L +L+ +V A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAA 217
Query: 270 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-----------------KVLR----- 307
+ + +TG +Y +GW G L P R +++ +V R
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVE 277
Query: 308 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 352
P +LD ++S G HT VVT G L+ +G + QLGH+
Sbjct: 278 DGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 45/228 (19%)
Query: 144 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 203
P P PL Q+ G + L + G V+S+G G + LGHG EL+PR ++
Sbjct: 146 PRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE 205
Query: 204 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-------------------- 243
+G+ + V+AG H V + +G +Y WG G L
Sbjct: 206 AL--QGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGL 263
Query: 244 --HGDEIDKT------LPEPLSSLKSHL----------AVQVCARKRKTFVLVDTGSVYG 285
G ++ +T P P +++ AV+V R T V+ TG +Y
Sbjct: 264 NEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYT 323
Query: 286 FGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHHVSQISTGLYHTVV 331
+GW +G LG D D PR ++ + V ++ G ++T V
Sbjct: 324 WGWGKYGQLGHEDTTSLDW---PRRVEYFVDKQLQVKAVTCGPWNTYV 368
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 81/213 (38%), Gaps = 44/213 (20%)
Query: 54 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 113
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLTMAEVAAGGW 220
Query: 114 FTGFLTIRGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIA--- 162
+ ++ G ++ G N GQL G+T+ R L E GS V+
Sbjct: 221 HSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAR----EATGLNEDGSQVKRTGRV 276
Query: 163 --AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 220
P+ +AV + GS+ V+VS G
Sbjct: 277 EDGAPAPFIAVQPFPALLDLPLGSD--------------------------AVKVSCGSR 310
Query: 221 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 253
H + +G +YTWG G G LGH D P
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWP 343
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 255 PLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 309
P LA ++ AR+ + +L G V+ +G G LG G + L PR
Sbjct: 146 PRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPR 202
Query: 310 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 367
+L++L+ +++++ G +H+V V++ G ++ +G NE QL T R E E +E
Sbjct: 203 LLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT-RNLAEDGETVARE 259
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 2 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 59
Q+ G H LL+ + VFS G G LGHG T + R+ + +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLTMAEVAAGG 219
Query: 60 NHAAFVLQSGQVFTCGDNSS-------------------FCCGHRDTNRPIFR------- 93
H+ V ++G ++ G N S G + + R
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDG 279
Query: 94 -----------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 142
P L++ G +V+ G T +T G ++T G +GQLGH DT
Sbjct: 280 APAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 143 RPTPKSI 149
P+ +
Sbjct: 340 LDWPRRV 346
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 44 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--K 101
++ P + V+VS H A V ++G+++T G GH DT + PR VE K
Sbjct: 294 LDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDWPRRVEYFVDK 352
Query: 102 GVPCKQVTAG 111
+ K VT G
Sbjct: 353 QLQVKAVTCG 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,785,767
Number of Sequences: 539616
Number of extensions: 6467045
Number of successful extensions: 16054
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 14637
Number of HSP's gapped (non-prelim): 506
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)