Query 017200
Match_columns 375
No_of_seqs 384 out of 2464
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 10:34:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017200.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017200hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7v_A Methylornithine synthas 99.9 6.6E-26 2.3E-30 222.7 18.7 219 91-324 24-249 (350)
2 3iix_A Biotin synthetase, puta 99.9 2.6E-23 8.8E-28 203.1 22.8 228 91-338 16-256 (348)
3 2qgq_A Protein TM_1862; alpha- 99.9 1.3E-23 4.4E-28 203.4 20.3 213 129-345 4-231 (304)
4 1r30_A Biotin synthase; SAM ra 99.9 3.7E-22 1.3E-26 197.7 22.5 231 94-340 34-275 (369)
5 1olt_A Oxygen-independent copr 99.7 3.1E-17 1.1E-21 167.1 17.6 218 129-356 53-295 (457)
6 1tv8_A MOAA, molybdenum cofact 99.6 1.4E-14 4.7E-19 141.2 19.4 172 132-315 17-198 (340)
7 3c8f_A Pyruvate formate-lyase 99.6 6.8E-14 2.3E-18 128.0 15.7 204 129-345 20-243 (245)
8 2yx0_A Radical SAM enzyme; pre 99.5 9.6E-13 3.3E-17 128.5 18.3 205 137-353 79-319 (342)
9 2z2u_A UPF0026 protein MJ0257; 99.3 3.7E-12 1.3E-16 122.3 10.2 203 133-353 55-296 (311)
10 2a5h_A L-lysine 2,3-aminomutas 99.1 1.6E-09 5.4E-14 109.2 18.2 162 131-310 117-290 (416)
11 3rfa_A Ribosomal RNA large sub 99.1 1.5E-09 5E-14 109.3 16.0 201 135-346 121-342 (404)
12 3can_A Pyruvate-formate lyase- 98.3 8.4E-06 2.9E-10 71.8 13.1 161 175-347 5-180 (182)
13 2cw6_A Hydroxymethylglutaryl-C 97.9 5.8E-05 2E-09 72.5 10.3 145 156-310 23-176 (298)
14 4fhd_A Spore photoproduct lyas 97.6 9.7E-05 3.3E-09 73.3 8.1 163 132-301 110-282 (368)
15 2ftp_A Hydroxymethylglutaryl-C 97.6 0.0005 1.7E-08 66.0 12.8 142 156-310 26-179 (302)
16 1ydo_A HMG-COA lyase; TIM-barr 97.6 0.00028 9.5E-09 68.2 10.8 142 156-310 24-177 (307)
17 1ydn_A Hydroxymethylglutaryl-C 97.6 0.00037 1.3E-08 66.6 11.5 143 156-310 22-175 (295)
18 3ble_A Citramalate synthase fr 97.1 0.0022 7.4E-08 62.7 10.7 138 156-310 37-189 (337)
19 3eeg_A 2-isopropylmalate synth 96.9 0.015 5.2E-07 56.4 14.0 142 156-310 24-171 (325)
20 3ewb_X 2-isopropylmalate synth 96.8 0.016 5.5E-07 55.5 13.6 142 156-310 23-170 (293)
21 1nvm_A HOA, 4-hydroxy-2-oxoval 96.6 0.0095 3.3E-07 58.2 10.5 137 156-309 26-168 (345)
22 3ivs_A Homocitrate synthase, m 96.4 0.033 1.1E-06 56.1 13.3 142 156-310 57-200 (423)
23 3rmj_A 2-isopropylmalate synth 96.1 0.03 1E-06 55.4 10.6 139 156-310 30-177 (370)
24 1rqb_A Transcarboxylase 5S sub 96.0 0.043 1.5E-06 56.9 12.1 135 156-310 43-195 (539)
25 2nx9_A Oxaloacetate decarboxyl 96.0 0.062 2.1E-06 54.7 12.6 135 156-310 26-178 (464)
26 2ztj_A Homocitrate synthase; ( 95.4 0.14 4.8E-06 50.6 12.5 140 156-310 21-164 (382)
27 3lab_A Putative KDPG (2-keto-3 94.6 0.55 1.9E-05 43.1 13.0 113 157-311 22-140 (217)
28 4e38_A Keto-hydroxyglutarate-a 94.1 0.92 3.1E-05 41.9 13.7 114 157-312 43-156 (232)
29 1aj0_A DHPS, dihydropteroate s 93.6 0.85 2.9E-05 43.3 12.7 140 156-303 34-208 (282)
30 3dxi_A Putative aldolase; TIM 92.6 0.34 1.2E-05 46.8 8.6 137 156-310 20-163 (320)
31 1eye_A DHPS 1, dihydropteroate 92.4 2.7 9.1E-05 39.8 14.2 138 156-302 25-199 (280)
32 3no5_A Uncharacterized protein 92.0 3.2 0.00011 39.2 14.2 147 156-303 26-197 (275)
33 2yci_X 5-methyltetrahydrofolat 91.8 3.9 0.00013 38.4 14.6 136 157-303 31-193 (271)
34 1h5y_A HISF; histidine biosynt 91.3 1.2 4E-05 39.9 10.1 76 158-239 31-106 (253)
35 2y7e_A 3-keto-5-aminohexanoate 90.9 3.4 0.00012 39.2 13.2 141 156-301 30-201 (282)
36 2dqw_A Dihydropteroate synthas 90.5 3.8 0.00013 39.1 13.2 138 156-302 48-219 (294)
37 1vhc_A Putative KHG/KDPG aldol 90.4 6.9 0.00024 35.6 14.5 112 157-310 26-137 (224)
38 3chv_A Prokaryotic domain of u 90.4 1.9 6.6E-05 41.0 11.0 159 138-301 9-199 (284)
39 2vp8_A Dihydropteroate synthas 90.3 1.1 3.8E-05 43.3 9.4 140 156-302 61-239 (318)
40 1wbh_A KHG/KDPG aldolase; lyas 90.2 8.2 0.00028 34.7 14.7 112 157-310 25-136 (214)
41 1mxs_A KDPG aldolase; 2-keto-3 89.7 11 0.00036 34.3 15.1 112 157-310 35-146 (225)
42 3vnd_A TSA, tryptophan synthas 89.5 2 6.7E-05 40.4 10.1 165 194-366 4-201 (267)
43 1h1y_A D-ribulose-5-phosphate 88.9 1.6 5.5E-05 39.4 8.9 132 157-316 16-150 (228)
44 3lot_A Uncharacterized protein 87.9 2.8 9.7E-05 40.4 10.3 84 156-240 28-116 (314)
45 3bg3_A Pyruvate carboxylase, m 87.7 3.3 0.00011 44.3 11.5 138 157-310 122-281 (718)
46 1vzw_A Phosphoribosyl isomeras 86.9 1.8 6.2E-05 39.1 7.9 76 160-242 32-107 (244)
47 3nav_A Tryptophan synthase alp 86.6 1.6 5.4E-05 41.2 7.6 150 194-349 6-182 (271)
48 4fxs_A Inosine-5'-monophosphat 86.4 8.5 0.00029 39.1 13.4 131 160-313 230-366 (496)
49 3inp_A D-ribulose-phosphate 3- 86.4 5.2 0.00018 37.1 10.8 153 157-342 37-193 (246)
50 3tr9_A Dihydropteroate synthas 86.0 12 0.00042 35.9 13.6 138 157-302 46-224 (314)
51 2wje_A CPS4B, tyrosine-protein 85.9 6.7 0.00023 35.5 11.3 48 156-203 20-67 (247)
52 2y88_A Phosphoribosyl isomeras 85.5 2.1 7.2E-05 38.5 7.6 75 160-241 31-105 (244)
53 4avf_A Inosine-5'-monophosphat 85.2 17 0.00058 36.8 14.9 134 160-313 228-364 (490)
54 1vc4_A Indole-3-glycerol phosp 85.0 13 0.00043 34.4 12.8 119 160-312 65-183 (254)
55 1yxy_A Putative N-acetylmannos 84.9 20 0.0007 31.8 14.2 122 157-312 31-164 (234)
56 3apt_A Methylenetetrahydrofola 84.9 2.1 7.1E-05 41.0 7.5 60 157-216 83-150 (310)
57 3fst_A 5,10-methylenetetrahydr 84.5 3.3 0.00011 39.6 8.8 79 157-236 94-180 (304)
58 4af0_A Inosine-5'-monophosphat 84.2 1.8 6.1E-05 44.8 7.1 135 160-313 280-416 (556)
59 3usb_A Inosine-5'-monophosphat 84.0 17 0.00058 37.0 14.3 133 159-313 254-391 (511)
60 2y5s_A DHPS, dihydropteroate s 83.9 5.8 0.0002 37.8 10.1 139 156-303 42-217 (294)
61 1tx2_A DHPS, dihydropteroate s 83.9 9.6 0.00033 36.3 11.7 138 157-302 60-226 (297)
62 1tqj_A Ribulose-phosphate 3-ep 83.9 1.5 5.2E-05 39.9 5.9 155 157-342 14-171 (230)
63 3hq1_A 2-isopropylmalate synth 83.6 6.9 0.00023 41.3 11.4 142 156-309 89-251 (644)
64 1qop_A Tryptophan synthase alp 83.6 5 0.00017 37.2 9.4 80 157-236 28-126 (268)
65 3e49_A Uncharacterized protein 83.2 3.7 0.00013 39.5 8.5 83 156-239 28-113 (311)
66 4eiv_A Deoxyribose-phosphate a 82.9 9.1 0.00031 36.6 10.9 152 143-309 87-264 (297)
67 3e96_A Dihydrodipicolinate syn 82.3 14 0.00047 35.1 12.2 120 202-342 8-137 (316)
68 3e02_A Uncharacterized protein 80.3 11 0.00039 36.1 10.7 83 156-239 28-113 (311)
69 1y0e_A Putative N-acetylmannos 79.9 31 0.001 30.2 16.7 154 157-349 20-182 (223)
70 3hbl_A Pyruvate carboxylase; T 79.7 23 0.00078 39.8 14.4 79 157-239 552-647 (1150)
71 3gr7_A NADPH dehydrogenase; fl 79.6 6.3 0.00021 38.0 8.8 81 156-239 225-307 (340)
72 3qze_A DHDPS, dihydrodipicolin 79.2 7.4 0.00025 37.1 9.1 94 206-310 24-125 (314)
73 3c6c_A 3-keto-5-aminohexanoate 79.0 4.6 0.00016 39.0 7.4 88 129-216 14-105 (316)
74 3tsm_A IGPS, indole-3-glycerol 78.8 38 0.0013 31.7 13.7 120 159-311 78-197 (272)
75 3qja_A IGPS, indole-3-glycerol 78.8 31 0.001 32.2 13.0 120 159-311 71-190 (272)
76 1jvn_A Glutamine, bifunctional 78.6 10 0.00034 39.1 10.4 102 141-243 261-371 (555)
77 3na8_A Putative dihydrodipicol 78.5 8.5 0.00029 36.7 9.3 97 203-310 22-126 (315)
78 3mcm_A 2-amino-4-hydroxy-6-hyd 78.3 9.4 0.00032 38.4 9.8 75 157-235 209-294 (442)
79 4fo4_A Inosine 5'-monophosphat 76.9 37 0.0013 33.1 13.5 133 161-313 108-243 (366)
80 1xi3_A Thiamine phosphate pyro 76.9 13 0.00045 32.3 9.4 65 161-237 27-91 (215)
81 4djd_D C/Fe-SP, corrinoid/iron 76.8 40 0.0014 32.4 13.4 137 159-301 79-236 (323)
82 3r2g_A Inosine 5'-monophosphat 76.7 58 0.002 31.7 14.8 132 159-313 98-231 (361)
83 2e6f_A Dihydroorotate dehydrog 76.6 9.5 0.00033 35.7 8.9 84 222-311 109-196 (314)
84 2w6r_A Imidazole glycerol phos 76.0 6.1 0.00021 36.0 7.2 75 159-239 29-103 (266)
85 1z41_A YQJM, probable NADH-dep 75.0 7.2 0.00025 37.4 7.7 80 156-239 225-307 (338)
86 1pii_A N-(5'phosphoribosyl)ant 75.0 14 0.00049 37.2 10.1 141 168-334 125-299 (452)
87 2yw3_A 4-hydroxy-2-oxoglutarat 74.8 45 0.0015 29.5 12.8 110 157-310 22-131 (207)
88 2wqp_A Polysialic acid capsule 74.7 12 0.00041 36.5 9.2 106 158-269 33-172 (349)
89 2qf7_A Pyruvate carboxylase pr 74.4 12 0.00041 42.2 10.3 135 156-309 569-728 (1165)
90 3tdn_A FLR symmetric alpha-bet 74.2 3.4 0.00012 37.5 4.9 74 160-239 35-108 (247)
91 3dz1_A Dihydrodipicolinate syn 73.8 16 0.00055 34.6 9.8 100 222-342 32-132 (313)
92 2ekc_A AQ_1548, tryptophan syn 73.7 54 0.0019 30.0 13.4 80 157-236 28-126 (262)
93 1ka9_F Imidazole glycerol phos 73.4 7.1 0.00024 35.1 6.9 75 159-239 30-104 (252)
94 1vli_A Spore coat polysacchari 73.0 11 0.00038 37.2 8.6 106 158-269 42-182 (385)
95 1mzh_A Deoxyribose-phosphate a 72.6 53 0.0018 29.4 13.9 126 157-309 17-151 (225)
96 1thf_D HISF protein; thermophI 72.4 10 0.00034 34.1 7.7 75 159-239 29-103 (253)
97 4fo4_A Inosine 5'-monophosphat 72.1 64 0.0022 31.4 13.8 116 164-310 61-177 (366)
98 2r91_A 2-keto-3-deoxy-(6-phosp 72.1 40 0.0014 31.3 12.0 98 222-342 22-122 (286)
99 1wa3_A 2-keto-3-deoxy-6-phosph 72.0 48 0.0016 28.6 11.9 112 157-310 19-131 (205)
100 3k13_A 5-methyltetrahydrofolat 71.9 69 0.0023 30.3 14.5 73 157-237 34-111 (300)
101 2ftp_A Hydroxymethylglutaryl-C 71.8 11 0.00038 35.4 8.1 80 157-240 156-236 (302)
102 3noy_A 4-hydroxy-3-methylbut-2 71.3 80 0.0028 30.9 14.7 126 157-309 43-182 (366)
103 1jcn_A Inosine monophosphate d 71.1 49 0.0017 33.3 13.2 131 160-313 254-390 (514)
104 1hjs_A Beta-1,4-galactanase; 4 70.9 60 0.002 30.8 13.2 139 167-312 34-214 (332)
105 2a4a_A Deoxyribose-phosphate a 70.6 31 0.0011 32.5 10.8 150 142-308 92-257 (281)
106 1xky_A Dihydrodipicolinate syn 70.5 22 0.00075 33.5 9.8 92 207-309 14-113 (301)
107 3sr7_A Isopentenyl-diphosphate 70.2 16 0.00054 35.8 8.9 135 159-312 101-239 (365)
108 1geq_A Tryptophan synthase alp 70.2 57 0.0019 29.0 12.2 79 159-239 18-115 (248)
109 3h5d_A DHDPS, dihydrodipicolin 70.0 51 0.0018 31.1 12.3 94 206-310 8-110 (311)
110 2cw6_A Hydroxymethylglutaryl-C 69.8 17 0.00059 34.0 8.9 78 157-238 153-231 (298)
111 3fkr_A L-2-keto-3-deoxyarabona 69.7 27 0.00091 33.1 10.2 77 222-309 32-109 (309)
112 3d0c_A Dihydrodipicolinate syn 69.6 38 0.0013 32.0 11.4 115 207-342 13-137 (314)
113 3khj_A Inosine-5-monophosphate 69.0 78 0.0027 30.6 13.6 156 164-356 60-220 (361)
114 3flu_A DHDPS, dihydrodipicolin 68.9 38 0.0013 31.7 11.1 78 222-310 31-109 (297)
115 4gj1_A 1-(5-phosphoribosyl)-5- 68.9 9.1 0.00031 35.0 6.6 66 160-230 151-216 (243)
116 1gte_A Dihydropyrimidine dehyd 68.9 37 0.0013 37.4 12.5 171 158-346 646-846 (1025)
117 1zco_A 2-dehydro-3-deoxyphosph 68.9 17 0.00057 33.8 8.4 67 279-347 24-92 (262)
118 2nuw_A 2-keto-3-deoxygluconate 68.9 43 0.0015 31.2 11.4 98 222-342 23-123 (288)
119 3daq_A DHDPS, dihydrodipicolin 68.3 40 0.0014 31.5 11.1 78 222-310 26-104 (292)
120 3cpr_A Dihydrodipicolinate syn 68.2 45 0.0016 31.3 11.5 114 208-342 19-142 (304)
121 3si9_A DHDPS, dihydrodipicolin 68.0 25 0.00085 33.4 9.7 78 222-310 46-124 (315)
122 2bmb_A Folic acid synthesis pr 67.9 66 0.0022 33.2 13.3 76 158-237 247-336 (545)
123 1w3i_A EDA, 2-keto-3-deoxy glu 67.8 43 0.0015 31.3 11.2 98 222-342 23-123 (293)
124 1ep3_A Dihydroorotate dehydrog 67.5 28 0.00097 32.1 9.9 142 158-312 109-272 (311)
125 1f76_A Dihydroorotate dehydrog 67.5 17 0.00058 34.4 8.4 81 157-239 222-318 (336)
126 2wkj_A N-acetylneuraminate lya 67.4 27 0.00092 32.9 9.7 115 207-342 13-137 (303)
127 2ekc_A AQ_1548, tryptophan syn 67.3 75 0.0026 29.0 14.4 18 254-271 75-92 (262)
128 3hgj_A Chromate reductase; TIM 67.1 36 0.0012 32.6 10.7 51 260-310 205-259 (349)
129 2xwp_A Sirohydrochlorin cobalt 66.9 22 0.00075 32.6 8.8 125 161-313 61-201 (264)
130 3qfe_A Putative dihydrodipicol 66.6 36 0.0012 32.3 10.5 77 222-309 35-112 (318)
131 3f4w_A Putative hexulose 6 pho 66.4 32 0.0011 29.8 9.5 122 165-313 69-190 (211)
132 3lmz_A Putative sugar isomeras 66.4 56 0.0019 28.9 11.3 96 222-344 33-128 (257)
133 3ble_A Citramalate synthase fr 66.2 23 0.00079 33.9 9.1 99 157-266 166-267 (337)
134 2h9a_B CO dehydrogenase/acetyl 65.8 85 0.0029 29.8 12.9 72 160-234 74-149 (310)
135 3eb2_A Putative dihydrodipicol 65.7 34 0.0012 32.1 10.0 77 222-309 28-105 (300)
136 2yxg_A DHDPS, dihydrodipicolin 65.6 45 0.0015 31.0 10.8 77 222-309 24-101 (289)
137 3obk_A Delta-aminolevulinic ac 65.6 10 0.00035 36.9 6.3 57 156-212 69-132 (356)
138 1vrd_A Inosine-5'-monophosphat 65.6 1.1E+02 0.0038 30.4 14.7 131 160-312 236-371 (494)
139 3tak_A DHDPS, dihydrodipicolin 65.5 40 0.0014 31.4 10.5 78 222-310 25-103 (291)
140 2ehh_A DHDPS, dihydrodipicolin 65.5 48 0.0016 30.9 11.0 77 222-309 24-101 (294)
141 3l21_A DHDPS, dihydrodipicolin 65.3 27 0.00093 32.9 9.3 92 208-310 18-117 (304)
142 3l5l_A Xenobiotic reductase A; 65.2 11 0.00038 36.5 6.7 79 157-239 243-325 (363)
143 1jub_A Dihydroorotate dehydrog 65.1 22 0.00074 33.2 8.5 119 187-311 71-193 (311)
144 1rpx_A Protein (ribulose-phosp 65.0 19 0.00065 32.0 7.8 79 157-240 20-99 (230)
145 1vhn_A Putative flavin oxidore 65.0 8.6 0.00029 36.4 5.7 76 157-239 137-213 (318)
146 2v82_A 2-dehydro-3-deoxy-6-pho 64.9 69 0.0024 27.7 12.5 111 157-309 16-127 (212)
147 3gr7_A NADPH dehydrogenase; fl 64.6 11 0.00036 36.4 6.4 50 261-310 198-249 (340)
148 2l82_A Designed protein OR32; 64.4 58 0.002 26.7 10.5 75 158-237 11-108 (162)
149 3b0p_A TRNA-dihydrouridine syn 64.1 18 0.00061 34.9 7.9 77 159-239 143-225 (350)
150 3b4u_A Dihydrodipicolinate syn 63.8 52 0.0018 30.7 10.9 99 222-341 27-129 (294)
151 2vc6_A MOSA, dihydrodipicolina 63.7 56 0.0019 30.4 11.1 77 222-309 24-101 (292)
152 4h3d_A 3-dehydroquinate dehydr 63.6 91 0.0031 28.6 15.0 48 157-208 29-78 (258)
153 3lye_A Oxaloacetate acetyl hyd 63.5 1E+02 0.0035 29.2 14.0 184 166-369 38-268 (307)
154 3m5v_A DHDPS, dihydrodipicolin 63.5 44 0.0015 31.3 10.4 79 222-310 31-110 (301)
155 1f6k_A N-acetylneuraminate lya 63.5 57 0.0019 30.4 11.1 77 222-309 27-105 (293)
156 3hgj_A Chromate reductase; TIM 63.3 18 0.00063 34.7 7.8 80 156-239 235-318 (349)
157 3tha_A Tryptophan synthase alp 63.3 1.3 4.4E-05 41.5 -0.5 18 331-348 154-172 (252)
158 3ovp_A Ribulose-phosphate 3-ep 63.1 10 0.00034 34.5 5.6 81 156-243 13-98 (228)
159 3nl6_A Thiamine biosynthetic b 63.1 57 0.002 33.4 11.9 114 159-313 24-141 (540)
160 1jw9_B Molybdopterin biosynthe 63.1 75 0.0026 28.7 11.6 70 164-236 45-125 (249)
161 1nvm_A HOA, 4-hydroxy-2-oxoval 63.0 21 0.00072 34.2 8.1 79 157-239 146-226 (345)
162 2rfg_A Dihydrodipicolinate syn 62.9 51 0.0017 30.8 10.7 77 222-309 24-101 (297)
163 3l5l_A Xenobiotic reductase A; 62.6 27 0.00093 33.7 8.9 51 261-311 212-267 (363)
164 1w5q_A Delta-aminolevulinic ac 62.1 11 0.00036 36.6 5.6 56 157-212 63-125 (337)
165 2cc0_A Acetyl-xylan esterase; 61.7 77 0.0026 27.2 11.0 132 164-313 47-186 (195)
166 1m5w_A Pyridoxal phosphate bio 61.4 25 0.00086 32.5 7.8 134 159-312 76-217 (243)
167 1ydn_A Hydroxymethylglutaryl-C 61.1 24 0.00081 32.9 8.0 127 157-301 152-280 (295)
168 1tqx_A D-ribulose-5-phosphate 61.1 12 0.00042 34.0 5.7 78 157-238 121-200 (227)
169 2r8w_A AGR_C_1641P; APC7498, d 60.7 50 0.0017 31.5 10.3 77 222-309 58-135 (332)
170 1rd5_A Tryptophan synthase alp 60.6 49 0.0017 29.9 9.9 75 159-237 31-123 (262)
171 2v9d_A YAGE; dihydrodipicolini 60.4 50 0.0017 31.7 10.3 77 222-309 55-132 (343)
172 3s5o_A 4-hydroxy-2-oxoglutarat 60.3 51 0.0017 31.0 10.2 76 223-309 39-115 (307)
173 2b7n_A Probable nicotinate-nuc 59.9 24 0.00083 32.8 7.7 65 164-239 193-257 (273)
174 3oa3_A Aldolase; structural ge 59.3 1.2E+02 0.0041 28.6 12.6 168 157-355 71-246 (288)
175 1qop_A Tryptophan synthase alp 59.2 60 0.0021 29.7 10.3 48 222-270 34-91 (268)
176 3nvt_A 3-deoxy-D-arabino-heptu 58.9 24 0.00082 34.8 7.8 121 158-305 154-278 (385)
177 1o5k_A DHDPS, dihydrodipicolin 58.4 67 0.0023 30.1 10.7 92 207-309 15-113 (306)
178 3o63_A Probable thiamine-phosp 58.3 1.1E+02 0.0037 27.8 12.9 116 160-313 43-165 (243)
179 3khj_A Inosine-5-monophosphate 58.3 1.3E+02 0.0046 28.9 13.9 130 163-313 107-239 (361)
180 1yad_A Regulatory protein TENI 58.1 95 0.0032 27.1 13.7 68 158-239 28-95 (221)
181 1f6y_A 5-methyltetrahydrofolat 58.1 1.1E+02 0.0039 28.0 12.3 73 157-237 22-96 (262)
182 2jbm_A Nicotinate-nucleotide p 57.8 25 0.00084 33.3 7.5 65 164-239 208-272 (299)
183 3ngj_A Deoxyribose-phosphate a 57.7 1.1E+02 0.0039 27.9 12.2 167 157-355 40-212 (239)
184 1pv8_A Delta-aminolevulinic ac 57.5 15 0.00053 35.4 5.9 56 157-212 56-118 (330)
185 1thf_D HISF protein; thermophI 57.0 19 0.00065 32.2 6.3 72 161-238 152-223 (253)
186 3q58_A N-acetylmannosamine-6-p 56.9 1.1E+02 0.0038 27.4 13.0 115 157-309 33-155 (229)
187 1zfj_A Inosine monophosphate d 56.8 1.3E+02 0.0046 29.6 13.2 131 160-313 232-368 (491)
188 3otr_A Enolase; structural gen 56.8 29 0.00098 35.0 8.0 156 157-353 281-441 (452)
189 2yr1_A 3-dehydroquinate dehydr 56.7 1.2E+02 0.0041 27.8 14.9 47 157-206 29-76 (257)
190 1ydo_A HMG-COA lyase; TIM-barr 56.6 20 0.0007 33.9 6.7 78 157-238 154-232 (307)
191 1rqb_A Transcarboxylase 5S sub 56.4 32 0.0011 35.5 8.5 77 158-238 173-251 (539)
192 3o1n_A 3-dehydroquinate dehydr 56.3 1.3E+02 0.0043 28.0 15.6 135 157-310 49-196 (276)
193 3vnd_A TSA, tryptophan synthas 55.8 46 0.0016 30.9 8.9 80 157-236 29-127 (267)
194 1n7k_A Deoxyribose-phosphate a 55.7 1.2E+02 0.0041 27.6 12.9 130 157-310 33-168 (234)
195 1z41_A YQJM, probable NADH-dep 55.7 1.4E+02 0.0047 28.2 15.0 87 223-311 148-250 (338)
196 1vrd_A Inosine-5'-monophosphat 55.6 30 0.001 34.7 8.1 124 163-310 177-306 (494)
197 1h7n_A 5-aminolaevulinic acid 55.6 25 0.00087 34.0 7.1 56 157-212 66-129 (342)
198 3ctl_A D-allulose-6-phosphate 55.3 29 0.001 31.5 7.3 152 157-342 10-165 (231)
199 2y88_A Phosphoribosyl isomeras 55.2 30 0.001 30.7 7.3 72 161-238 150-224 (244)
200 1vzw_A Phosphoribosyl isomeras 54.9 17 0.00059 32.4 5.7 73 161-239 147-222 (244)
201 2vef_A Dihydropteroate synthas 54.6 32 0.0011 32.8 7.7 77 156-237 29-110 (314)
202 3ngj_A Deoxyribose-phosphate a 54.5 18 0.00061 33.4 5.7 142 143-309 82-228 (239)
203 1tv5_A Dhodehase, dihydroorota 54.3 49 0.0017 33.1 9.3 81 157-239 308-402 (443)
204 1h5y_A HISF; histidine biosynt 54.2 24 0.00081 31.1 6.4 73 160-238 154-226 (253)
205 4dpp_A DHDPS 2, dihydrodipicol 53.9 34 0.0012 33.3 7.9 92 207-309 61-160 (360)
206 1l6s_A Porphobilinogen synthas 53.6 26 0.0009 33.6 6.8 54 157-212 55-115 (323)
207 4hb7_A Dihydropteroate synthas 53.4 1E+02 0.0035 28.8 10.8 137 156-302 26-192 (270)
208 3a5f_A Dihydrodipicolinate syn 52.7 50 0.0017 30.8 8.6 82 223-315 26-110 (291)
209 1vp8_A Hypothetical protein AF 52.6 77 0.0026 28.4 9.3 86 154-251 23-120 (201)
210 3cu2_A Ribulose-5-phosphate 3- 52.5 12 0.0004 34.4 4.1 79 157-243 23-103 (237)
211 2ojp_A DHDPS, dihydrodipicolin 52.4 60 0.0021 30.2 9.2 77 222-309 25-102 (292)
212 3usb_A Inosine-5'-monophosphat 52.1 1.4E+02 0.0049 30.1 12.5 126 161-310 194-325 (511)
213 4gj1_A 1-(5-phosphoribosyl)-5- 52.1 22 0.00075 32.4 5.9 75 159-239 30-104 (243)
214 3ewb_X 2-isopropylmalate synth 52.0 53 0.0018 30.8 8.7 126 157-301 147-276 (293)
215 1twd_A Copper homeostasis prot 51.8 84 0.0029 29.2 9.8 122 160-310 73-198 (256)
216 2fli_A Ribulose-phosphate 3-ep 51.6 29 0.00098 30.3 6.5 78 156-240 12-92 (220)
217 1w1z_A Delta-aminolevulinic ac 50.7 23 0.0008 34.0 5.9 54 157-212 61-121 (328)
218 4a29_A Engineered retro-aldol 50.2 1.5E+02 0.0053 27.4 11.3 114 168-313 121-236 (258)
219 3eeg_A 2-isopropylmalate synth 50.2 35 0.0012 32.6 7.2 101 157-266 148-252 (325)
220 2tps_A Protein (thiamin phosph 50.1 49 0.0017 28.8 7.8 65 162-238 33-100 (227)
221 1jvn_A Glutamine, bifunctional 49.3 38 0.0013 34.7 7.8 90 161-264 453-543 (555)
222 1ka9_F Imidazole glycerol phos 49.0 48 0.0016 29.5 7.7 91 160-264 152-242 (252)
223 1vs1_A 3-deoxy-7-phosphoheptul 49.0 54 0.0019 30.6 8.2 67 279-347 39-107 (276)
224 3tsm_A IGPS, indole-3-glycerol 48.6 83 0.0028 29.3 9.4 116 166-312 135-251 (272)
225 1ps9_A 2,4-dienoyl-COA reducta 48.5 40 0.0014 34.9 8.0 51 260-310 194-248 (671)
226 4d9a_A 2-pyrone-4,6-dicarbaxyl 48.5 1.7E+02 0.0057 27.0 12.7 173 161-368 55-237 (303)
227 2gou_A Oxidoreductase, FMN-bin 48.4 53 0.0018 31.7 8.3 75 157-239 247-322 (365)
228 2bdq_A Copper homeostasis prot 48.4 1.1E+02 0.0036 27.9 9.8 131 159-313 75-210 (224)
229 1twd_A Copper homeostasis prot 48.2 24 0.00082 32.9 5.5 70 161-239 129-198 (256)
230 3hdg_A Uncharacterized protein 47.7 92 0.0031 23.8 8.8 39 196-236 67-105 (137)
231 2isw_A Putative fructose-1,6-b 47.6 1.4E+02 0.0048 28.6 10.9 170 158-349 27-211 (323)
232 2w6r_A Imidazole glycerol phos 47.6 53 0.0018 29.5 7.8 72 161-238 157-228 (266)
233 1sfl_A 3-dehydroquinate dehydr 47.5 1.6E+02 0.0054 26.5 14.3 134 157-310 14-162 (238)
234 3g8r_A Probable spore coat pol 47.0 64 0.0022 31.3 8.6 106 158-269 19-159 (350)
235 1qo2_A Molecule: N-((5-phospho 46.8 23 0.00078 31.7 5.1 74 159-239 29-102 (241)
236 2nx9_A Oxaloacetate decarboxyl 46.5 71 0.0024 32.1 9.1 76 158-238 156-232 (464)
237 3l5a_A NADH/flavin oxidoreduct 46.4 12 0.00043 37.1 3.5 80 157-239 261-346 (419)
238 3rr1_A GALD, putative D-galact 46.2 83 0.0028 30.7 9.4 56 157-212 124-182 (405)
239 2iw0_A Chitin deacetylase; hyd 45.9 80 0.0028 28.5 8.7 141 164-313 89-238 (254)
240 1mzh_A Deoxyribose-phosphate a 45.8 52 0.0018 29.4 7.3 73 157-237 129-202 (225)
241 3bg3_A Pyruvate carboxylase, m 45.8 60 0.002 34.6 8.8 78 157-238 258-336 (718)
242 3oix_A Putative dihydroorotate 45.7 2.1E+02 0.007 27.4 12.0 144 158-310 139-304 (345)
243 1vr6_A Phospho-2-dehydro-3-deo 45.5 68 0.0023 31.1 8.5 68 278-347 106-175 (350)
244 3rmj_A 2-isopropylmalate synth 45.5 86 0.0029 30.5 9.3 79 157-239 154-236 (370)
245 3zwt_A Dihydroorotate dehydrog 45.4 78 0.0027 30.7 9.0 81 157-239 231-327 (367)
246 3f4w_A Putative hexulose 6 pho 45.4 36 0.0012 29.5 6.0 74 159-239 113-187 (211)
247 2f6u_A GGGPS, (S)-3-O-geranylg 45.1 39 0.0013 30.9 6.4 140 209-368 10-186 (234)
248 2ovl_A Putative racemase; stru 44.8 1.8E+02 0.0061 27.6 11.4 149 157-349 145-300 (371)
249 2j13_A Polysaccharide deacetyl 44.3 38 0.0013 30.7 6.3 138 164-314 98-243 (247)
250 1zud_1 Adenylyltransferase THI 44.1 1.8E+02 0.0061 26.1 12.0 70 164-236 42-122 (251)
251 2r14_A Morphinone reductase; H 43.9 34 0.0012 33.4 6.1 76 157-239 252-328 (377)
252 3mz2_A Glycerophosphoryl diest 43.7 2E+02 0.0069 26.6 11.8 115 163-309 145-265 (292)
253 3p6l_A Sugar phosphate isomera 43.6 1.7E+02 0.0057 25.6 10.6 120 208-346 9-132 (262)
254 1ps9_A 2,4-dienoyl-COA reducta 43.4 40 0.0014 34.9 7.0 81 156-239 224-310 (671)
255 1ny1_A Probable polysaccharide 43.2 82 0.0028 28.2 8.3 136 164-313 86-230 (240)
256 3ffs_A Inosine-5-monophosphate 43.1 52 0.0018 32.5 7.4 130 163-313 146-278 (400)
257 1q7z_A 5-methyltetrahydrofolat 43.1 2.9E+02 0.0099 28.3 14.2 137 157-304 337-500 (566)
258 3ajx_A 3-hexulose-6-phosphate 42.8 1.6E+02 0.0054 25.1 10.2 70 157-237 10-82 (207)
259 3nav_A Tryptophan synthase alp 42.5 1.6E+02 0.0055 27.3 10.3 123 162-312 114-239 (271)
260 1t57_A Conserved protein MTH16 42.3 1.2E+02 0.0041 27.3 8.8 107 154-278 31-149 (206)
261 3s1x_A Probable transaldolase; 42.1 1E+02 0.0036 27.9 8.7 77 168-251 120-196 (223)
262 3n9r_A Fructose-bisphosphate a 42.0 1.8E+02 0.0063 27.6 10.8 136 158-309 26-174 (307)
263 3b0p_A TRNA-dihydrouridine syn 42.0 1.6E+02 0.0054 28.0 10.5 87 222-310 73-164 (350)
264 3paj_A Nicotinate-nucleotide p 41.9 72 0.0025 30.6 7.9 62 164-239 242-303 (320)
265 1qpo_A Quinolinate acid phosph 41.8 69 0.0024 30.0 7.7 65 164-239 205-269 (284)
266 2r14_A Morphinone reductase; H 41.7 57 0.002 31.7 7.4 88 224-311 171-276 (377)
267 2vyo_A ECU11_0510, chitooligos 41.7 1.8E+02 0.006 26.2 10.4 135 165-315 72-219 (254)
268 2agk_A 1-(5-phosphoribosyl)-5- 41.4 31 0.0011 31.7 5.2 70 161-236 158-233 (260)
269 3igs_A N-acetylmannosamine-6-p 41.2 2E+02 0.0067 25.8 15.3 115 157-309 33-155 (232)
270 3i65_A Dihydroorotate dehydrog 41.1 85 0.0029 31.1 8.6 81 157-239 280-374 (415)
271 1yxy_A Putative N-acetylmannos 40.5 81 0.0028 27.7 7.7 126 160-312 88-217 (234)
272 1vyr_A Pentaerythritol tetrani 40.4 80 0.0027 30.4 8.2 75 157-239 248-323 (364)
273 3gka_A N-ethylmaleimide reduct 40.2 71 0.0024 30.9 7.8 51 260-310 214-270 (361)
274 1p0k_A Isopentenyl-diphosphate 40.1 2.4E+02 0.0082 26.5 11.5 132 163-310 76-209 (349)
275 1o4u_A Type II quinolic acid p 39.2 40 0.0014 31.8 5.5 70 158-239 199-268 (285)
276 4dad_A Putative pilus assembly 39.0 1.1E+02 0.0038 23.7 7.7 39 196-236 83-121 (146)
277 3gnh_A L-lysine, L-arginine ca 39.0 1.5E+02 0.0052 27.5 9.8 84 157-246 164-254 (403)
278 1ur4_A Galactanase; hydrolase, 38.9 2.7E+02 0.0093 27.2 11.8 55 255-312 174-234 (399)
279 3hzh_A Chemotaxis response reg 38.6 1.1E+02 0.0038 24.2 7.8 39 196-236 99-137 (157)
280 3q45_A Mandelate racemase/muco 38.5 2.6E+02 0.0089 26.6 11.5 146 157-347 139-291 (368)
281 4avf_A Inosine-5'-monophosphat 38.5 75 0.0026 32.0 7.9 122 165-310 171-298 (490)
282 1zco_A 2-dehydro-3-deoxyphosph 38.4 42 0.0014 31.0 5.6 76 158-240 35-114 (262)
283 3tqv_A Nicotinate-nucleotide p 38.4 67 0.0023 30.4 7.0 66 159-239 205-270 (287)
284 3ozy_A Putative mandelate race 38.2 2.8E+02 0.0095 26.6 11.9 147 157-348 150-304 (389)
285 3eul_A Possible nitrate/nitrit 38.1 1.4E+02 0.0049 23.3 9.4 39 196-236 77-115 (152)
286 3nvt_A 3-deoxy-D-arabino-heptu 38.1 1E+02 0.0034 30.2 8.5 66 280-347 144-211 (385)
287 1vs1_A 3-deoxy-7-phosphoheptul 37.9 2.2E+02 0.0074 26.5 10.4 75 158-239 50-128 (276)
288 1fob_A Beta-1,4-galactanase; B 37.8 2.6E+02 0.0089 26.2 13.6 136 167-312 34-215 (334)
289 1rvg_A Fructose-1,6-bisphospha 37.7 2.1E+02 0.0073 27.1 10.4 167 158-347 26-207 (305)
290 2rdx_A Mandelate racemase/muco 37.7 2.7E+02 0.0093 26.4 12.3 143 158-348 145-294 (379)
291 2pz0_A Glycerophosphoryl diest 37.5 1.4E+02 0.0048 26.7 8.9 105 164-309 133-238 (252)
292 1mdl_A Mandelate racemase; iso 37.2 2.6E+02 0.009 26.2 11.2 148 158-349 144-298 (359)
293 2oz8_A MLL7089 protein; struct 37.1 1.3E+02 0.0044 28.9 9.1 50 157-212 144-194 (389)
294 1vcv_A Probable deoxyribose-ph 37.0 2.3E+02 0.008 25.5 14.6 154 140-305 51-211 (226)
295 4ef8_A Dihydroorotate dehydrog 36.9 1.1E+02 0.0036 29.6 8.4 117 187-310 106-228 (354)
296 2e6f_A Dihydroorotate dehydrog 36.8 92 0.0031 28.8 7.8 81 157-239 171-273 (314)
297 3gk0_A PNP synthase, pyridoxin 36.3 44 0.0015 31.5 5.2 134 159-312 104-245 (278)
298 1qpo_A Quinolinate acid phosph 36.0 1.2E+02 0.0039 28.5 8.2 90 196-312 182-271 (284)
299 4hjf_A Ggdef family protein; s 35.9 1.8E+02 0.0061 27.5 9.8 114 192-336 211-326 (340)
300 4e7p_A Response regulator; DNA 35.5 1.6E+02 0.0054 23.0 9.7 39 196-236 82-120 (150)
301 2o55_A Putative glycerophospho 35.4 1.4E+02 0.0048 26.7 8.6 112 163-309 129-243 (258)
302 4i6k_A Amidohydrolase family p 35.4 2.5E+02 0.0086 25.3 13.9 121 160-305 53-175 (294)
303 3gnn_A Nicotinate-nucleotide p 35.1 90 0.0031 29.6 7.3 66 159-239 216-281 (298)
304 1vr6_A Phospho-2-dehydro-3-deo 35.0 1.5E+02 0.0052 28.6 9.1 120 158-304 118-241 (350)
305 1vyr_A Pentaerythritol tetrani 34.9 1.3E+02 0.0046 28.8 8.8 52 260-311 214-272 (364)
306 2q5c_A NTRC family transcripti 34.8 37 0.0013 29.8 4.4 91 193-291 14-108 (196)
307 4ab4_A Xenobiotic reductase B; 34.7 92 0.0032 30.1 7.6 50 261-310 207-262 (362)
308 2gou_A Oxidoreductase, FMN-bin 34.5 43 0.0015 32.4 5.1 52 260-311 214-271 (365)
309 3b2n_A Uncharacterized protein 34.3 1.5E+02 0.0052 22.5 8.7 58 196-269 65-122 (133)
310 3q94_A Fructose-bisphosphate a 34.3 2.1E+02 0.0073 26.8 9.8 169 158-346 30-210 (288)
311 3qja_A IGPS, indole-3-glycerol 34.3 96 0.0033 28.7 7.3 66 167-239 176-242 (272)
312 1eep_A Inosine 5'-monophosphat 34.3 3.2E+02 0.011 26.2 13.8 131 161-312 153-287 (404)
313 1gvf_A Tagatose-bisphosphate a 34.2 2.2E+02 0.0074 26.7 9.8 167 158-346 27-206 (286)
314 2bdq_A Copper homeostasis prot 34.1 63 0.0021 29.5 5.8 71 160-238 133-206 (224)
315 1ccw_A Protein (glutamate muta 34.0 1.9E+02 0.0064 23.5 8.4 72 157-238 41-118 (137)
316 3ktc_A Xylose isomerase; putat 33.6 1.7E+02 0.0058 27.0 9.1 142 160-309 107-270 (333)
317 3q58_A N-acetylmannosamine-6-p 33.5 1.3E+02 0.0045 26.9 8.0 117 164-312 92-212 (229)
318 1vpx_A Protein (transaldolase 33.3 1.4E+02 0.0047 27.2 8.0 115 166-310 25-141 (230)
319 1vcv_A Probable deoxyribose-ph 33.2 2.7E+02 0.0093 25.0 15.2 178 157-364 14-204 (226)
320 2hsa_B 12-oxophytodienoate red 33.1 80 0.0027 31.0 6.9 88 223-310 175-286 (402)
321 3igs_A N-acetylmannosamine-6-p 33.1 1.4E+02 0.0047 26.8 8.0 117 164-312 92-212 (232)
322 2p10_A MLL9387 protein; putati 32.8 3.2E+02 0.011 25.7 10.6 132 166-310 41-190 (286)
323 3l0g_A Nicotinate-nucleotide p 32.7 75 0.0026 30.2 6.3 88 195-312 194-281 (300)
324 1gte_A Dihydropyrimidine dehyd 32.5 80 0.0027 34.7 7.4 111 190-310 616-735 (1025)
325 1oy0_A Ketopantoate hydroxymet 32.4 3.2E+02 0.011 25.6 12.6 138 156-310 76-221 (281)
326 3gka_A N-ethylmaleimide reduct 32.2 71 0.0024 30.9 6.2 67 159-239 249-316 (361)
327 3r8r_A Transaldolase; pentose 32.1 77 0.0026 28.5 6.0 77 168-251 118-194 (212)
328 1icp_A OPR1, 12-oxophytodienoa 32.0 92 0.0031 30.2 7.1 88 223-310 171-276 (376)
329 3o6c_A PNP synthase, pyridoxin 31.9 66 0.0023 30.0 5.6 72 159-238 75-151 (260)
330 3kru_A NADH:flavin oxidoreduct 31.7 86 0.0029 30.1 6.7 80 156-239 226-307 (343)
331 1ep3_A Dihydroorotate dehydrog 31.5 94 0.0032 28.5 6.8 78 159-239 175-270 (311)
332 1qwg_A PSL synthase;, (2R)-pho 31.4 3.1E+02 0.011 25.2 12.2 131 157-310 23-168 (251)
333 1jub_A Dihydroorotate dehydrog 31.2 1.6E+02 0.0054 27.1 8.4 169 158-346 104-301 (311)
334 4ab4_A Xenobiotic reductase B; 31.2 75 0.0026 30.8 6.2 67 159-239 241-308 (362)
335 2hsa_B 12-oxophytodienoate red 31.1 1.3E+02 0.0043 29.5 7.9 78 157-239 257-348 (402)
336 3s83_A Ggdef family protein; s 31.0 2.5E+02 0.0085 24.7 9.4 132 159-313 105-239 (259)
337 3qvq_A Phosphodiesterase OLEI0 30.9 2.9E+02 0.0098 24.6 11.7 102 167-309 134-237 (252)
338 1h1y_A D-ribulose-5-phosphate 30.8 62 0.0021 28.7 5.2 69 164-239 127-201 (228)
339 3tva_A Xylose isomerase domain 30.8 1.6E+02 0.0055 26.1 8.2 17 293-309 105-121 (290)
340 2i5g_A Amidohydrolase; NYSGXRC 30.8 75 0.0026 30.3 6.1 132 164-313 103-250 (325)
341 3toy_A Mandelate racemase/muco 30.2 2.5E+02 0.0086 26.9 9.9 149 157-349 166-322 (383)
342 3tdn_A FLR symmetric alpha-bet 30.0 11 0.00038 34.0 0.0 73 161-239 157-229 (247)
343 4fxs_A Inosine-5'-monophosphat 30.0 1.7E+02 0.006 29.3 9.0 81 209-310 220-300 (496)
344 3kto_A Response regulator rece 29.5 1.7E+02 0.0057 22.4 7.1 39 196-236 68-106 (136)
345 2hmc_A AGR_L_411P, dihydrodipi 29.5 3.7E+02 0.013 25.5 10.9 73 223-309 51-124 (344)
346 3f6c_A Positive transcription 29.4 1.2E+02 0.0041 23.0 6.2 39 196-236 62-100 (134)
347 3sbf_A Mandelate racemase / mu 29.4 3.4E+02 0.012 26.1 10.8 153 158-348 133-309 (401)
348 3paj_A Nicotinate-nucleotide p 29.3 1.5E+02 0.0051 28.4 7.9 87 195-312 218-305 (320)
349 1s2w_A Phosphoenolpyruvate pho 29.2 3.6E+02 0.012 25.2 11.3 128 158-310 92-238 (295)
350 4djd_C C/Fe-SP, corrinoid/iron 29.0 3.2E+02 0.011 27.3 10.5 68 157-235 102-178 (446)
351 3r12_A Deoxyribose-phosphate a 29.0 3.5E+02 0.012 25.0 13.3 166 157-355 56-228 (260)
352 1zlp_A PSR132, petal death pro 28.7 90 0.0031 29.8 6.2 84 221-310 48-136 (318)
353 4dwd_A Mandelate racemase/muco 28.7 4E+02 0.014 25.6 11.8 153 158-349 139-299 (393)
354 3cqj_A L-ribulose-5-phosphate 28.6 2.3E+02 0.008 25.1 8.9 83 222-310 33-128 (295)
355 1w8s_A FBP aldolase, fructose- 28.6 2.7E+02 0.0092 25.3 9.3 119 166-310 98-231 (263)
356 1fob_A Beta-1,4-galactanase; B 28.6 1.5E+02 0.005 28.0 7.8 82 222-312 30-136 (334)
357 3i6e_A Muconate cycloisomerase 28.5 2.2E+02 0.0076 27.3 9.2 49 158-212 148-196 (385)
358 3go2_A Putative L-alanine-DL-g 28.3 2.7E+02 0.0094 26.9 9.9 56 157-212 142-217 (409)
359 3oa3_A Aldolase; structural ge 28.3 2.2E+02 0.0076 26.7 8.8 86 157-251 185-273 (288)
360 1zlp_A PSR132, petal death pro 28.3 3.9E+02 0.013 25.3 11.5 192 165-370 51-279 (318)
361 1rd5_A Tryptophan synthase alp 28.2 3.2E+02 0.011 24.3 9.9 80 222-309 35-124 (262)
362 1j93_A UROD, uroporphyrinogen 28.1 2.1E+02 0.007 26.9 8.7 147 165-343 198-353 (353)
363 2nx2_A Hypothetical protein YP 28.1 26 0.0009 30.6 2.1 45 165-216 35-80 (181)
364 1qtw_A Endonuclease IV; DNA re 28.0 3E+02 0.01 24.0 11.4 108 159-268 88-204 (285)
365 3iwp_A Copper homeostasis prot 27.9 3.2E+02 0.011 25.7 9.8 72 164-240 50-132 (287)
366 2qxy_A Response regulator; reg 27.7 2E+02 0.0069 21.9 7.6 39 196-236 63-101 (142)
367 3neh_A Renal dipeptidase famil 27.7 1.3E+02 0.0044 28.7 7.1 130 164-311 117-262 (318)
368 3r12_A Deoxyribose-phosphate a 27.6 1.7E+02 0.0058 27.1 7.7 74 156-237 169-243 (260)
369 3l0g_A Nicotinate-nucleotide p 27.4 1.3E+02 0.0044 28.6 6.9 62 164-239 218-279 (300)
370 2pgw_A Muconate cycloisomerase 27.4 2.3E+02 0.0078 27.0 9.0 47 158-211 147-193 (384)
371 1tmy_A CHEY protein, TMY; chem 27.0 1.9E+02 0.0064 21.2 7.4 39 196-236 63-101 (120)
372 2otd_A Glycerophosphodiester p 26.9 2.6E+02 0.0088 24.7 8.8 98 173-312 139-236 (247)
373 3rqi_A Response regulator prot 26.6 2.4E+02 0.0081 23.1 8.0 54 196-251 67-120 (184)
374 3cqj_A L-ribulose-5-phosphate 26.6 3.4E+02 0.012 24.0 10.6 140 159-309 107-261 (295)
375 1tzz_A Hypothetical protein L1 26.2 4.3E+02 0.015 25.1 12.0 50 157-212 164-214 (392)
376 3jte_A Response regulator rece 26.2 2.2E+02 0.0074 21.7 10.6 39 196-236 65-103 (143)
377 3qz6_A HPCH/HPAI aldolase; str 26.1 3.7E+02 0.013 24.4 10.4 126 166-311 30-175 (261)
378 3eod_A Protein HNR; response r 26.1 1.9E+02 0.0064 21.7 6.8 39 196-236 67-105 (130)
379 3tqv_A Nicotinate-nucleotide p 25.5 1.3E+02 0.0045 28.3 6.6 88 195-312 185-272 (287)
380 4e5t_A Mandelate racemase / mu 25.4 1.4E+02 0.0048 29.0 7.1 152 157-346 150-314 (404)
381 1mxs_A KDPG aldolase; 2-keto-3 25.3 1.9E+02 0.0066 25.8 7.5 59 166-237 132-193 (225)
382 3p6l_A Sugar phosphate isomera 25.3 3E+02 0.01 23.9 8.8 133 159-309 90-234 (262)
383 2r8c_A Putative amidohydrolase 25.3 2.7E+02 0.0093 26.1 9.1 88 158-251 173-267 (426)
384 3ovp_A Ribulose-phosphate 3-ep 25.2 38 0.0013 30.6 2.7 61 174-238 135-196 (228)
385 2ze3_A DFA0005; organic waste 25.1 1.1E+02 0.0039 28.4 6.1 84 221-309 25-111 (275)
386 2pcq_A Putative dihydrodipicol 25.1 1.1E+02 0.0039 28.2 6.1 47 255-309 47-94 (283)
387 1tv5_A Dhodehase, dihydroorota 25.1 5.1E+02 0.017 25.6 13.7 170 159-346 196-432 (443)
388 3dx5_A Uncharacterized protein 25.1 3.2E+02 0.011 24.0 9.1 20 162-181 17-36 (286)
389 3iwp_A Copper homeostasis prot 25.0 78 0.0027 29.9 4.9 71 161-239 167-238 (287)
390 1ea9_C Cyclomaltodextrinase; h 24.9 87 0.003 31.9 5.7 62 286-347 168-237 (583)
391 3cz5_A Two-component response 24.8 2.3E+02 0.0079 22.0 7.3 39 196-236 67-105 (153)
392 1ub3_A Aldolase protein; schif 24.8 3.7E+02 0.013 23.9 11.5 165 157-353 16-186 (220)
393 3kws_A Putative sugar isomeras 24.7 68 0.0023 28.7 4.4 141 160-309 104-261 (287)
394 3feq_A Putative amidohydrolase 24.6 2.6E+02 0.0089 26.0 8.7 88 157-250 169-263 (423)
395 3dcp_A Histidinol-phosphatase; 24.5 3.6E+02 0.012 24.7 9.5 74 161-236 19-118 (283)
396 3aty_A Tcoye, prostaglandin F2 24.5 1.6E+02 0.0054 28.6 7.2 73 157-239 263-336 (379)
397 3ndo_A Deoxyribose-phosphate a 24.2 4E+02 0.014 24.1 12.4 168 157-355 26-202 (231)
398 1qo2_A Molecule: N-((5-phospho 24.2 1E+02 0.0034 27.3 5.4 72 161-238 145-222 (241)
399 3vav_A 3-methyl-2-oxobutanoate 24.1 4.4E+02 0.015 24.5 10.7 53 255-309 72-125 (275)
400 3vav_A 3-methyl-2-oxobutanoate 23.7 4.5E+02 0.015 24.5 15.0 139 156-310 71-215 (275)
401 3aty_A Tcoye, prostaglandin F2 23.6 1.6E+02 0.0053 28.6 7.0 136 155-312 161-338 (379)
402 3cfy_A Putative LUXO repressor 23.6 2.5E+02 0.0085 21.5 9.0 39 196-236 64-102 (137)
403 1qkk_A DCTD, C4-dicarboxylate 23.6 2.6E+02 0.0089 21.7 8.1 39 196-236 63-101 (155)
404 3qtp_A Enolase 1; glycolysis, 23.5 3.1E+02 0.01 27.4 9.2 129 193-343 282-428 (441)
405 1a04_A Nitrate/nitrite respons 23.4 3.2E+02 0.011 22.7 8.9 58 196-269 67-124 (215)
406 1tqx_A D-ribulose-5-phosphate 23.4 4E+02 0.014 23.7 10.2 126 157-310 15-145 (227)
407 3lub_A Putative creatinine ami 23.3 1.5E+02 0.0052 27.0 6.5 52 156-214 89-144 (254)
408 2eja_A URO-D, UPD, uroporphyri 23.2 3.9E+02 0.013 24.7 9.6 146 165-341 184-335 (338)
409 1jcn_A Inosine monophosphate d 23.1 4.5E+02 0.015 26.0 10.6 69 221-310 256-324 (514)
410 2yxo_A Histidinol phosphatase; 23.1 2.2E+02 0.0074 25.1 7.5 48 163-210 19-74 (267)
411 3kht_A Response regulator; PSI 23.0 2.5E+02 0.0087 21.4 8.2 39 196-236 67-107 (144)
412 1p2f_A Response regulator; DRR 22.9 3.3E+02 0.011 22.7 8.9 58 196-269 59-116 (220)
413 2y8u_A Chitin deacetylase; hyd 22.9 3.8E+02 0.013 23.6 9.0 137 164-314 75-222 (230)
414 3t4x_A Oxidoreductase, short c 22.8 3.2E+02 0.011 24.0 8.6 67 163-239 24-92 (267)
415 2qsj_A DNA-binding response re 22.7 2.7E+02 0.0092 21.5 9.3 39 196-236 66-104 (154)
416 3h8v_A Ubiquitin-like modifier 22.7 2.5E+02 0.0084 26.2 8.0 65 164-229 50-124 (292)
417 1dbw_A Transcriptional regulat 22.5 2.4E+02 0.0082 20.9 10.2 39 196-236 63-101 (126)
418 3tqp_A Enolase; energy metabol 22.5 1.1E+02 0.0038 30.3 5.8 152 156-349 262-419 (428)
419 1ujp_A Tryptophan synthase alp 22.4 4.5E+02 0.015 24.0 9.8 122 163-313 109-232 (271)
420 1me8_A Inosine-5'-monophosphat 22.4 92 0.0031 31.3 5.2 138 158-313 239-384 (503)
421 2pju_A Propionate catabolism o 22.4 1.2E+02 0.0041 27.3 5.5 78 193-270 22-105 (225)
422 3snk_A Response regulator CHEY 22.2 1.4E+02 0.0048 22.7 5.4 39 196-236 75-113 (135)
423 3cwo_X Beta/alpha-barrel prote 22.1 2.3E+02 0.0079 23.8 7.2 73 158-236 128-200 (237)
424 2r6o_A Putative diguanylate cy 22.0 2.7E+02 0.0092 25.5 8.1 126 165-313 135-263 (294)
425 3qn3_A Enolase; structural gen 21.9 5.7E+02 0.019 25.0 12.2 141 158-310 216-388 (417)
426 2qr3_A Two-component system re 21.8 2.6E+02 0.0088 21.0 8.4 39 196-236 68-106 (140)
427 2qgy_A Enolase from the enviro 21.6 5.3E+02 0.018 24.5 11.1 148 158-349 149-303 (391)
428 3inp_A D-ribulose-phosphate 3- 21.4 59 0.002 29.8 3.3 62 173-238 156-222 (246)
429 3sz8_A 2-dehydro-3-deoxyphosph 21.3 2.1E+02 0.0072 26.8 7.1 125 158-309 32-167 (285)
430 3ivs_A Homocitrate synthase, m 21.3 2.8E+02 0.0097 27.4 8.4 76 157-237 177-253 (423)
431 3pzs_A PM kinase, pyridoxamine 21.2 2.8E+02 0.0095 25.1 8.0 105 157-269 57-175 (289)
432 1icp_A OPR1, 12-oxophytodienoa 21.2 69 0.0023 31.1 3.8 77 157-239 253-330 (376)
433 2yxb_A Coenzyme B12-dependent 21.1 3.6E+02 0.012 22.4 9.6 70 157-237 56-127 (161)
434 3hv2_A Response regulator/HD d 21.1 2.9E+02 0.01 21.4 10.2 39 196-236 74-113 (153)
435 1y0e_A Putative N-acetylmannos 21.0 3.9E+02 0.013 22.8 14.4 126 164-312 79-206 (223)
436 2yw3_A 4-hydroxy-2-oxoglutarat 21.0 3.3E+02 0.011 23.6 8.1 61 167-238 118-178 (207)
437 3cl6_A PUUE allantoinase; URIC 21.0 1.5E+02 0.005 27.5 6.0 65 164-232 111-180 (308)
438 2i2x_B MTAC, methyltransferase 20.9 4.1E+02 0.014 23.8 9.0 72 157-241 161-232 (258)
439 3lf2_A Short chain oxidoreduct 20.9 3.3E+02 0.011 23.9 8.3 66 164-239 23-94 (265)
440 3zs7_A Pyridoxal kinase; trans 20.9 59 0.002 30.3 3.2 28 158-185 163-190 (300)
441 3cnb_A DNA-binding response re 20.9 2.7E+02 0.0093 20.9 9.6 39 196-236 70-110 (143)
442 2qjg_A Putative aldolase MJ040 20.8 4.4E+02 0.015 23.3 12.9 66 226-312 173-239 (273)
443 2qiw_A PEP phosphonomutase; st 20.7 4.8E+02 0.016 23.7 10.7 131 166-309 33-187 (255)
444 3tva_A Xylose isomerase domain 20.7 1.5E+02 0.0051 26.4 5.9 141 159-309 101-258 (290)
445 3l5a_A NADH/flavin oxidoreduct 20.7 57 0.0019 32.3 3.2 52 260-311 224-286 (419)
446 1k68_A Phytochrome response re 20.6 2.7E+02 0.0091 20.7 7.7 39 196-236 71-111 (140)
447 1itu_A Renal dipeptidase; glyc 20.6 1.5E+02 0.0051 28.8 6.1 133 164-312 135-288 (369)
448 1olt_A Oxygen-independent copr 20.6 5.9E+02 0.02 24.7 12.2 62 253-316 215-294 (457)
449 2c6q_A GMP reductase 2; TIM ba 20.5 3.1E+02 0.011 26.1 8.4 128 163-313 120-255 (351)
450 2wqp_A Polysialic acid capsule 20.5 89 0.003 30.3 4.4 69 279-348 20-110 (349)
451 3i65_A Dihydroorotate dehydrog 20.4 3.8E+02 0.013 26.4 9.1 26 286-311 279-304 (415)
452 3cu5_A Two component transcrip 20.4 3E+02 0.01 21.1 7.3 39 196-236 65-103 (141)
453 1xg4_A Probable methylisocitra 20.3 1.5E+02 0.005 27.9 5.8 84 221-310 26-114 (295)
454 1req_A Methylmalonyl-COA mutas 20.1 2.1E+02 0.007 30.6 7.4 69 163-239 637-706 (727)
455 2qjg_A Putative aldolase MJ040 20.1 3.3E+02 0.011 24.2 8.2 70 157-239 163-237 (273)
456 1lwj_A 4-alpha-glucanotransfer 20.1 1.3E+02 0.0045 29.1 5.7 59 288-346 21-87 (441)
457 3ndo_A Deoxyribose-phosphate a 20.0 2.4E+02 0.0082 25.6 7.0 73 158-237 144-217 (231)
458 1o4u_A Type II quinolic acid p 20.0 3.3E+02 0.011 25.3 8.2 91 195-312 179-270 (285)
459 3fs2_A 2-dehydro-3-deoxyphosph 20.0 1.6E+02 0.0055 27.8 6.0 125 158-309 53-188 (298)
No 1
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.94 E-value=6.6e-26 Score=222.70 Aligned_cols=219 Identities=16% Similarity=0.238 Sum_probs=172.2
Q ss_pred cHHHHHHHHhc---cChhhhhhhcCCCCcccccCCCCCCccEEEEeeeCCccCCCCcCCCCCCCCCCC--CCCcchHHHH
Q 017200 91 KYVQIKKKLRE---LKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAPP--PPDPDEPTNV 165 (375)
Q Consensus 91 ~~~~~~~~l~~---~~L~tvceeA~cpn~~ec~~~~~~~~~tatfm~i~d~C~~~C~FC~v~~~r~~~--~ld~eEi~~~ 165 (375)
+..++..+|.. ..+..+++.|+-.+.. .+|+. -...+++.++++|+.+|.||+++...... .++++|+++.
T Consensus 24 ~~~e~~~l~~~~~~~~~~~L~~~A~~~r~~-~~g~~---v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~ls~eei~~~ 99 (350)
T 3t7v_A 24 TDNDLRTLLSLESKEGLERLYSAARKVRDH-YFGNR---VFLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKET 99 (350)
T ss_dssp CHHHHHHHHTCCSHHHHHHHHHHHHHHHHH-HHTTE---EEEEEEEEEECCCCCCCTTCTTCTTSCCCCCBCCHHHHHHH
T ss_pred CHHHHHHHhcCCChhHHHHHHHHHHHHHHH-HCCCE---EEEEEeeecCCCcCCCCCcCCCcCcCCCCceeCCHHHHHHH
Confidence 35667777764 3466777777643332 22321 11233466899999999999998754222 3899999999
Q ss_pred HHHHHhcCCcEEEEEeeeCCCCC-cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccch-
Q 017200 166 AEAIASWGLDYVVITSVDRDDLA-DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV- 243 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgdr~dl~-d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv- 243 (375)
++.+.+.|+++|+|+||+.+.+. + .+++.++++.|++.++ +.+++..+.. +.+.++.|+++|++.+.+++|+.
T Consensus 100 ~~~~~~~G~~~i~l~gGe~p~~~~~--~~~~~~l~~~ik~~~~-i~i~~s~g~~--~~e~l~~L~~aG~~~i~i~lEt~~ 174 (350)
T 3t7v_A 100 CKTLKGAGFHMVDLTMGEDPYYYED--PNRFVELVQIVKEELG-LPIMISPGLM--DNATLLKAREKGANFLALYQETYD 174 (350)
T ss_dssp HHHHTTSCCSEEEEEECCCHHHHHS--THHHHHHHHHHHHHHC-SCEEEECSSC--CHHHHHHHHHTTEEEEECCCBCSC
T ss_pred HHHHHHCCCCEEEEeeCCCCccccC--HHHHHHHHHHHHhhcC-ceEEEeCCCC--CHHHHHHHHHcCCCEEEEeeecCC
Confidence 99999999999999999865432 2 5678999999997764 6776543333 78999999999999999999987
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCcc
Q 017200 244 EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVS 323 (375)
Q Consensus 244 ~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~ 323 (375)
+++|+.|+ +++++++++++++.+++. |+.+++++|+|+|||.+|+.++++++++++++.++|.+|. | .+++|+.
T Consensus 175 ~~~~~~i~-~~~~~~~~l~~i~~a~~~---Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~-p-~~gT~l~ 248 (350)
T 3t7v_A 175 TELYRKLR-VGQSFDGRVNARRFAKQQ---GYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFL-P-QEGTPLE 248 (350)
T ss_dssp HHHHHHHS-TTCCHHHHHHHHHHHHHH---TCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECC-C-CTTSTTT
T ss_pred HHHHHHhC-CCCCHHHHHHHHHHHHHc---CCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEeccee-e-CCCCcCc
Confidence 69999999 589999999999999994 7999999999999999999999999999999999997765 5 2355554
Q ss_pred c
Q 017200 324 E 324 (375)
Q Consensus 324 ~ 324 (375)
+
T Consensus 249 ~ 249 (350)
T 3t7v_A 249 G 249 (350)
T ss_dssp T
T ss_pred c
Confidence 4
No 2
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.91 E-value=2.6e-23 Score=203.06 Aligned_cols=228 Identities=17% Similarity=0.284 Sum_probs=177.0
Q ss_pred cHHHHHHHHhccC---hhhhhhhcCCCCcccccCCCCCCccEEE---EeeeCCccCCCCcCCCCCCCCCC-C--CCCcch
Q 017200 91 KYVQIKKKLRELK---LHTVCEEAKCPNLGECWSGGETGTATAT---IMILGDTCTRGCRFCNVKTSRAP-P--PPDPDE 161 (375)
Q Consensus 91 ~~~~~~~~l~~~~---L~tvceeA~cpn~~ec~~~~~~~~~tat---fm~i~d~C~~~C~FC~v~~~r~~-~--~ld~eE 161 (375)
+..++..+|...+ +..+++.|+-.+.. .+|+ .++ ++.++++|+.+|.||.+....+. . .++++|
T Consensus 16 ~~~e~~~ll~~~~~~~~~~l~~~A~~ir~~-~~g~------~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~~ls~ee 88 (348)
T 3iix_A 16 TREVLKEALSINDRGFNEALFKLADEIRRK-YVGD------EVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEE 88 (348)
T ss_dssp CHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHCS------EEEEEEEEEEECCCSCCCTTCTTCTTCCSSCCCBCCHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-HcCC------EEEEEEEeEecCCcCCcCccCCCCCCCCCcCceeCCHHH
Confidence 4566777776543 55566666543332 2332 333 36679999999999998875422 1 379999
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccccc
Q 017200 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (375)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlE 241 (375)
+++.++.+.+.|+++|+|+||..+.+. .+++.++++.|++. ++.|.+..+.. +.+.++.|+++|++.+.+++|
T Consensus 89 i~~~i~~~~~~g~~~i~~~gGe~p~~~---~~~~~~li~~i~~~--~~~i~~s~g~l--~~e~l~~L~~ag~~~v~i~le 161 (348)
T 3iix_A 89 IVERARLAVQFGAKTIVLQSGEDPYXM---PDVISDIVKEIKKM--GVAVTLSLGEW--PREYYEKWKEAGADRYLLRHE 161 (348)
T ss_dssp HHHHHHHHHHTTCSEEEEEESCCGGGT---THHHHHHHHHHHTT--SCEEEEECCCC--CHHHHHHHHHHTCCEEECCCB
T ss_pred HHHHHHHHHHCCCCEEEEEeCCCCCcc---HHHHHHHHHHHHhc--CceEEEecCCC--CHHHHHHHHHhCCCEEeeeee
Confidence 999999999999999999999855443 46799999999876 67777544444 789999999999999999999
Q ss_pred ch-HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCC
Q 017200 242 TV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRH 319 (375)
Q Consensus 242 tv-~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~ 319 (375)
+. +++++.++ ++.+++++++.++.+++ .|+.+++++|+|+ |||.+++.++++++++++++.+.+.+|. |. .+
T Consensus 162 t~~~~~~~~i~-~~~~~~~~~~~i~~~~~---~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~-p~-~g 235 (348)
T 3iix_A 162 TANPVLHRKLR-PDTSFENRLNCLLTLKE---LGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFI-PH-PD 235 (348)
T ss_dssp CSCHHHHHHHS-TTSCHHHHHHHHHHHHH---TTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECC-CC-TT
T ss_pred eCCHHHHHHhC-CCcCHHHHHHHHHHHHH---hCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeee-cC-CC
Confidence 87 69999999 56799999999999999 5899999999999 9999999999999999999999997764 52 35
Q ss_pred CCcccc--CCHHHHHHHHHHH
Q 017200 320 MPVSEY--ITPEAFERYRALG 338 (375)
Q Consensus 320 ~~v~~~--v~pe~~~~l~~~a 338 (375)
+++.+. .+++++..+..++
T Consensus 236 t~l~~~~~~~~~e~~~~~a~~ 256 (348)
T 3iix_A 236 TPLANEKKGDFTLTLKMVALT 256 (348)
T ss_dssp STTTTSCCCCHHHHHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHHHHH
Confidence 565543 3344444444333
No 3
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.91 E-value=1.3e-23 Score=203.43 Aligned_cols=213 Identities=17% Similarity=0.290 Sum_probs=152.4
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCCCC-CCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHHh
Q 017200 129 TATIMILGDTCTRGCRFCNVKTSRAP-PPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKEL 205 (375)
Q Consensus 129 tatfm~i~d~C~~~C~FC~v~~~r~~-~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~--G~~~~~~lir~Ik~~ 205 (375)
+..|+.++++|+.+|+||.++..+++ ..++++++++.++.+.+.|+++|+|+|++-..+..+ +..++.++++.|++.
T Consensus 4 ~~~~v~is~GC~~~C~fC~~~~~~g~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~ 83 (304)
T 2qgq_A 4 PYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL 83 (304)
T ss_dssp SEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS
T ss_pred EEEEEEECCCCCCcCccCCccccCCCceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc
Confidence 67889999999999999999986543 358999999999999999999999999764333110 124588999999875
Q ss_pred CCCc-EEEe--ecCCCCCChHHHHHHHHcC--cccccccccc-hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017200 206 KPNM-LIEA--LVPDFRGNNGCVREVAKSG--LNVFAHNIET-VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (375)
Q Consensus 206 ~p~i-~Ie~--l~pd~~g~~e~l~~L~~aG--ldv~~hnlEt-v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt 279 (375)
+++ .+.. ..|+.. +++.++.|+++| ++.+..++|+ .+++++.|+ |+++++++++.++.+++.+| |+.+.+
T Consensus 84 -~gi~~ir~~~~~p~~l-~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~-r~~t~e~~~~~i~~l~~~~~-gi~i~~ 159 (304)
T 2qgq_A 84 -NGEFWIRVMYLHPDHL-TEEIISAMLELDKVVKYFDVPVQHGSDKILKLMG-RTKSSEELKKMLSSIRERFP-DAVLRT 159 (304)
T ss_dssp -SSSCEEEECCCCGGGC-CHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTT-CCSCHHHHHHHHHHHHHHCT-TCEEEE
T ss_pred -CCCcEEEEeeeecccC-CHHHHHHHHhCCCCccEEEEecccCCHHHHHHhC-CCCCHHHHHHHHHHHHhhCC-CCEEEE
Confidence 444 4554 345544 789999999999 8889999996 569999999 89999999999999999866 489999
Q ss_pred eEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecCC-CCCCCCCCccccCCH----HHHHHHHHHHHHhhhhh
Q 017200 280 SIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVSEYITP----EAFERYRALGMEMGFRY 345 (375)
Q Consensus 280 ~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qYl-~P~~~~~~v~~~v~p----e~~~~l~~~a~~~gf~~ 345 (375)
++|+|| |||++|+.++++++++++++.+.+++|+ +|++....+...+.+ ++++.+.+++.++...+
T Consensus 160 ~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~~p~pgT~~~~~~~~v~~~~~~~r~~~l~~~~~~~~~~~ 231 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSR 231 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeeCCCCChhHhCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999886 443332222233443 45666777776655544
No 4
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.89 E-value=3.7e-22 Score=197.67 Aligned_cols=231 Identities=14% Similarity=0.211 Sum_probs=171.0
Q ss_pred HHHHHHhccChhhhhhhcCCCCcccccCCCCCCccEEEEeee-CCccCCCCcCCCCCCCC--C-C--CCCCcchHHHHHH
Q 017200 94 QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMIL-GDTCTRGCRFCNVKTSR--A-P--PPPDPDEPTNVAE 167 (375)
Q Consensus 94 ~~~~~l~~~~L~tvceeA~cpn~~ec~~~~~~~~~tatfm~i-~d~C~~~C~FC~v~~~r--~-~--~~ld~eEi~~~a~ 167 (375)
++..+++ ..+..+++.|.-.+...+.++. -...+++.+ +++|+.+|.||.++... + + ..++++|+++.++
T Consensus 34 e~~~l~~-~~~~~L~~~A~~~~~~~~~~~~---v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~~ 109 (369)
T 1r30_A 34 QVTELFE-KPLLDLLFEAQQVHRQHFDPRQ---VQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESAR 109 (369)
T ss_dssp TTHHHHH-SCHHHHHHHHHHHHHHHSCTTC---CEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHh-ccHHHHHHHHHHHHHHhcCCCE---EEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHHH
Confidence 3444444 4566666666544443221221 113444554 99999999999998631 1 1 2379999999999
Q ss_pred HHHhcCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHH
Q 017200 168 AIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEEL 246 (375)
Q Consensus 168 al~~~G~~eIvLTsgdr-~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl 246 (375)
.+.+.|++.|+|+|+.. +.. ...+++.++++.|++. ++.|. +++... +.+.++.|+++|+|.+.+++|+.+++
T Consensus 110 ~~~~~g~~~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~--g~~i~-~t~G~l-~~e~l~~L~~aGvd~v~i~les~~e~ 183 (369)
T 1r30_A 110 KAKAAGSTRFCMGAAWKNPHE--RDMPYLEQMVQGVKAM--GLEAC-MTLGTL-SESQAQRLANAGLDYYNHNLDTSPEF 183 (369)
T ss_dssp HHHHTTCSEEEEEECCSSCCT--TTHHHHHHHHHHHHHT--TSEEE-EECSSC-CHHHHHHHHHHCCCEEECCCBSCHHH
T ss_pred HHHHcCCcEEEEEeCCCCCCc--CCHHHHHHHHHHHHHc--CCeEE-EecCCC-CHHHHHHHHHCCCCEEeecCcCCHHH
Confidence 99999999999998752 221 2267899999999986 34554 355443 78999999999999999999997799
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC--CcEEeeecCCCCCCCCCCccc
Q 017200 247 QSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG--VDVMTFGQYMRPSKRHMPVSE 324 (375)
Q Consensus 247 ~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelg--vd~v~i~qYl~P~~~~~~v~~ 324 (375)
|+.++ ++++++++++.++.+++. |+.+++++|+|+|||.+|+.++++++++++ ++.+++..| .|. .++++.+
T Consensus 184 ~~~i~-~~~~~~~~l~~i~~a~~~---Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l-~p~-~gT~l~~ 257 (369)
T 1r30_A 184 YGNII-TTRTYQERLDTLEKVRDA---GIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINML-VKV-KGTPLAD 257 (369)
T ss_dssp HHHHC-CSSCHHHHHHHHHHHHHH---HCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEEC-CCC-TTSTTSS
T ss_pred HHHhC-CCCCHHHHHHHHHHHHHc---CCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeee-eec-CCCcCCC
Confidence 99999 689999999999999994 789999999999999999999999999998 889998655 452 3455543
Q ss_pred --cCCHHHHHHHHHHHHH
Q 017200 325 --YITPEAFERYRALGME 340 (375)
Q Consensus 325 --~v~pe~~~~l~~~a~~ 340 (375)
.++++++.++..+++.
T Consensus 258 ~~~~~~~~~~~~~~~~r~ 275 (369)
T 1r30_A 258 NDDVDAFDFIRTIAVARI 275 (369)
T ss_dssp CCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 2345555555444443
No 5
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.74 E-value=3.1e-17 Score=167.14 Aligned_cols=218 Identities=15% Similarity=0.229 Sum_probs=160.4
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCCC-CC---CCCcchHHHHHHHHHhc----CCcEEEEEeeeCCCCCcccHHHHHHHHH
Q 017200 129 TATIMILGDTCTRGCRFCNVKTSRA-PP---PPDPDEPTNVAEAIASW----GLDYVVITSVDRDDLADQGSGHFAQTVR 200 (375)
Q Consensus 129 tatfm~i~d~C~~~C~FC~v~~~r~-~~---~ld~eEi~~~a~al~~~----G~~eIvLTsgdr~dl~d~G~~~~~~lir 200 (375)
...|+.+. .|+.+|.||.+..... .. ....+.+.++++.+.+. ++..|.++||+...++ .+++.++++
T Consensus 53 ~~lYihIp-fC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l~---~~~l~~ll~ 128 (457)
T 1olt_A 53 LSLYVHIP-FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLN---KAQISRLMK 128 (457)
T ss_dssp EEEEEEEC-EESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSC---HHHHHHHHH
T ss_pred eEEEEEcC-CCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccCC---HHHHHHHHH
Confidence 45566665 6999999999986421 11 12356677777666544 4678888887643333 567899999
Q ss_pred HHHHhCC-----CcEEEeecCCCCCChHHHHHHHHcCcccccccccch-HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017200 201 KLKELKP-----NMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (375)
Q Consensus 201 ~Ik~~~p-----~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv-~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~G 274 (375)
.|++.++ .+.++ ..|+.. +.+.++.|+++|++.+.+++|+. +++++.|+ |++++++.++.++.+++ .|
T Consensus 129 ~i~~~~~~~~~~eitie-~~p~~l-~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~-R~~~~~~~~~ai~~~r~---~G 202 (457)
T 1olt_A 129 LLRENFQFNADAEISIE-VDPREI-ELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN-REQDEEFIFALLNHARE---IG 202 (457)
T ss_dssp HHHHHSCEEEEEEEEEE-ECSSSC-CTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT-CCCCHHHHHHHHHHHHH---TT
T ss_pred HHHHhCCCCCCcEEEEE-EccCcC-CHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC-CCCCHHHHHHHHHHHHH---cC
Confidence 9988654 23443 356644 78999999999999999999986 59999999 89999999999999999 57
Q ss_pred ce-EEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecCC-CCCCCCCC-c-ccc--CCHH----HHHHHHHHHHHhhh
Q 017200 275 TL-TKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMP-V-SEY--ITPE----AFERYRALGMEMGF 343 (375)
Q Consensus 275 l~-tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qYl-~P~~~~~~-v-~~~--v~pe----~~~~l~~~a~~~gf 343 (375)
+. +++++|+|+ |||.+++.++++.+.+++++.+.+.+|. .|..+... . .+. ..++ .++.+.+...+.||
T Consensus 203 ~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy 282 (457)
T 1olt_A 203 FTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGY 282 (457)
T ss_dssp CCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCC
Confidence 87 999999999 9999999999999999999999998886 44322111 1 111 1222 24444556667888
Q ss_pred hhhccchhhhhhc
Q 017200 344 RYVASGPMVRSSY 356 (375)
Q Consensus 344 ~~~~sgp~vrssy 356 (375)
.......++|..+
T Consensus 283 ~~yeis~fa~~~~ 295 (457)
T 1olt_A 283 QFIGMDHFARPDD 295 (457)
T ss_dssp EEEETTEEECTTS
T ss_pred eEEEechhcCCCc
Confidence 8777777777544
No 6
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.62 E-value=1.4e-14 Score=141.18 Aligned_cols=172 Identities=17% Similarity=0.268 Sum_probs=133.4
Q ss_pred EeeeCCccCCCCcCCCCCC----CC----CCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH
Q 017200 132 IMILGDTCTRGCRFCNVKT----SR----APPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK 203 (375)
Q Consensus 132 fm~i~d~C~~~C~FC~v~~----~r----~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik 203 (375)
.+.++++|+.+|.||.... .. ....++.+++.+.++.+.+.|++.|.||||+.--.++ +.++++.++
T Consensus 17 ~i~~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~-----l~~li~~~~ 91 (340)
T 1tv8_A 17 RLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRD-----LDVLIAKLN 91 (340)
T ss_dssp EEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTT-----HHHHHHHHT
T ss_pred EEEeCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhh-----HHHHHHHHH
Confidence 3557999999999998865 11 1123899999999999999999999999986322232 678888887
Q ss_pred HhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccch-HHHHHHhcCCCC-CHHHHHHHHHHHHHhCCCCceEEEeE
Q 017200 204 ELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRA-NFKQSLDVLMMAKDYVPAGTLTKTSI 281 (375)
Q Consensus 204 ~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv-~rl~~~mr~r~~-s~~~~l~vl~~ak~~~p~Gl~tkt~i 281 (375)
+......+.+.+-... ..+.++.|+++|++.+...+++. ++.++.++ ++. ++++.++.++.+++ .|+.++.++
T Consensus 92 ~~~~~~~i~i~TNG~l-l~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~-~~~~~~~~v~~~i~~l~~---~g~~v~i~~ 166 (340)
T 1tv8_A 92 QIDGIEDIGLTTNGLL-LKKHGQKLYDAGLRRINVSLDAIDDTLFQSIN-NRNIKATTILEQIDYATS---IGLNVKVNV 166 (340)
T ss_dssp TCTTCCEEEEEECSTT-HHHHHHHHHHHTCCEEEEECCCSSHHHHHHHH-SSCCCHHHHHHHHHHHHH---TTCEEEEEE
T ss_pred hCCCCCeEEEEeCccc-hHHHHHHHHHCCCCEEEEecCCCCHHHHHHhh-CCCCCHHHHHHHHHHHHH---CCCCEEEEE
Confidence 6533124554442211 25688999999999999999986 58999999 566 99999999999999 578888888
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCC
Q 017200 282 MLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRP 315 (375)
Q Consensus 282 mvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P 315 (375)
++.-|++++|+.+.++++++++++ +.+.+|+ |
T Consensus 167 vv~~g~n~~ei~~~~~~~~~~g~~-~~~i~~~-p 198 (340)
T 1tv8_A 167 VIQKGINDDQIIPMLEYFKDKHIE-IRFIEFM-D 198 (340)
T ss_dssp EECTTTTGGGHHHHHHHHHHTTCC-EEEEECC-C
T ss_pred EEeCCCCHHHHHHHHHHHHhcCCe-EEEEEee-E
Confidence 885599999999999999999998 3443554 5
No 7
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.55 E-value=6.8e-14 Score=128.04 Aligned_cols=204 Identities=11% Similarity=0.145 Sum_probs=144.2
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCCC---CCCCCcchHHHHHHHHHhc---CCcEEEEEeeeCCCCCcccHHHHHHHHHHH
Q 017200 129 TATIMILGDTCTRGCRFCNVKTSRA---PPPPDPDEPTNVAEAIASW---GLDYVVITSVDRDDLADQGSGHFAQTVRKL 202 (375)
Q Consensus 129 tatfm~i~d~C~~~C~FC~v~~~r~---~~~ld~eEi~~~a~al~~~---G~~eIvLTsgdr~dl~d~G~~~~~~lir~I 202 (375)
..++ +++++|+.+|.||..+.... ...++++++++.++.+.+. ++..|.|+||+- -+. .+.+.++++.+
T Consensus 20 ~~~~-i~t~~Cn~~C~~C~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP-~l~---~~~l~~l~~~~ 94 (245)
T 3c8f_A 20 IRFI-TFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEA-ILQ---AEFVRDWFRAC 94 (245)
T ss_dssp EEEE-EEESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCG-GGG---HHHHHHHHHHH
T ss_pred cEEE-EEeCCCCCCCCCCCCchhcccccCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCc-CCC---HHHHHHHHHHH
Confidence 4444 46789999999999874321 1237889999988877664 478999999763 221 34467899999
Q ss_pred HHhCCCcEEEeecCCCCC-ChHHHHHHHHcCcccccccccch-HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017200 203 KELKPNMLIEALVPDFRG-NNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (375)
Q Consensus 203 k~~~p~i~Ie~l~pd~~g-~~e~l~~L~~aGldv~~hnlEtv-~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~ 280 (375)
++. ++.+.+.+-.+.- +.+.++.+++. +|.+..++++. ++.++++++ .++++.++.++.+++. |+.+...
T Consensus 95 ~~~--~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~--~~~~~~~~~i~~l~~~---g~~v~i~ 166 (245)
T 3c8f_A 95 KKE--GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVG--VSNHRTLEFAKYLANK---NVKVWIR 166 (245)
T ss_dssp HTT--TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHS--SCSHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHc--CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccC--CCHHHHHHHHHHHHhc---CCEEEEE
Confidence 875 4555554422211 46778888887 88899999985 699999983 4579999999999985 4544444
Q ss_pred --EEEecCCCHHHHHHHHHHHHHcCC-cEEeeecCCCCCC-------CCCCcc--ccCCHHHHHHHHHHHHHhhhhh
Q 017200 281 --IMLGCGETPDQVVSTMEKVRAAGV-DVMTFGQYMRPSK-------RHMPVS--EYITPEAFERYRALGMEMGFRY 345 (375)
Q Consensus 281 --imvGlGET~ee~~etl~~Lrelgv-d~v~i~qYl~P~~-------~~~~v~--~~v~pe~~~~l~~~a~~~gf~~ 345 (375)
++-|++++.+++.++++++++++. +.+.+.+|.+... +..+.. ...++++.+++.+++.+.||..
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 167 YVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 243 (245)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCB
T ss_pred EeecCCCCCCHHHHHHHHHHHHhcCCCceeEEEeccccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHhcCCee
Confidence 444556889999999999999995 7888877653211 111221 2345678888888888888864
No 8
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.48 E-value=9.6e-13 Score=128.49 Aligned_cols=205 Identities=15% Similarity=0.104 Sum_probs=141.9
Q ss_pred CccCCCCcCCCCCCCC------CCCCCCcchHHHHHHHHHh------cC--------------CcEEEEE-eeeCCCCCc
Q 017200 137 DTCTRGCRFCNVKTSR------APPPPDPDEPTNVAEAIAS------WG--------------LDYVVIT-SVDRDDLAD 189 (375)
Q Consensus 137 d~C~~~C~FC~v~~~r------~~~~ld~eEi~~~a~al~~------~G--------------~~eIvLT-sgdr~dl~d 189 (375)
++|+.+|.||..+... ....++++|+++.+..... .| ++.|+|+ ||+.--.+
T Consensus 79 ~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGEPll~~- 157 (342)
T 2yx0_A 79 AWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEPMLYP- 157 (342)
T ss_dssp SCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCGGGST-
T ss_pred hhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCcccchh-
Confidence 7999999999986431 1123788888877655432 13 5789998 55422112
Q ss_pred ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC--cccccccccch-HHHHHHhcCC--CCCHHHHHHHH
Q 017200 190 QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG--LNVFAHNIETV-EELQSAVRDH--RANFKQSLDVL 264 (375)
Q Consensus 190 ~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG--ldv~~hnlEtv-~rl~~~mr~r--~~s~~~~l~vl 264 (375)
.+.++++.+++. ++.+.+.+-.. .++.++.|+++| ++.+...+++. +++++.+++. +.++++.++.+
T Consensus 158 ----~l~~ll~~~~~~--g~~i~l~TNG~--~~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i 229 (342)
T 2yx0_A 158 ----YMGDLVEEFHKR--GFTTFIVTNGT--IPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFL 229 (342)
T ss_dssp ----THHHHHHHHHHT--TCEEEEEECSC--CHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHH
T ss_pred ----hHHHHHHHHHHC--CCcEEEEcCCC--cHHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHH
Confidence 377888888775 56666655433 277899999988 89999999986 6999999832 57899999999
Q ss_pred HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCc--cccCCHHHHHHHHHHHHHh-
Q 017200 265 MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPV--SEYITPEAFERYRALGMEM- 341 (375)
Q Consensus 265 ~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v--~~~v~pe~~~~l~~~a~~~- 341 (375)
+.+++ .|+.+...+++.-|++++++.+.++.+++++++.+.+..|........+. ....+++++.++.+...+.
T Consensus 230 ~~l~~---~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l 306 (342)
T 2yx0_A 230 ELMRD---LPTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHL 306 (342)
T ss_dssp HHHTT---CSSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTC
T ss_pred HHHHh---CCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhc
Confidence 99988 47888888888669999999999999999999999887775321111222 2234566666666655543
Q ss_pred -hhhhhccchhhh
Q 017200 342 -GFRYVASGPMVR 353 (375)
Q Consensus 342 -gf~~~~sgp~vr 353 (375)
++.....+|..|
T Consensus 307 ~~~~I~~~~~~~~ 319 (342)
T 2yx0_A 307 PGYHIEDEYEPSR 319 (342)
T ss_dssp TTEEEEEEEGGGT
T ss_pred cCCceeeccccce
Confidence 444433444433
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=3.7e-12 Score=122.32 Aligned_cols=203 Identities=12% Similarity=0.152 Sum_probs=122.6
Q ss_pred eeeC-CccCCCCcCCCCCCCC----------CCCCCCcchHHHHHHHHHh---------------------cCCcEEEEE
Q 017200 133 MILG-DTCTRGCRFCNVKTSR----------APPPPDPDEPTNVAEAIAS---------------------WGLDYVVIT 180 (375)
Q Consensus 133 m~i~-d~C~~~C~FC~v~~~r----------~~~~ld~eEi~~~a~al~~---------------------~G~~eIvLT 180 (375)
+.++ ++|+.+|.||..+... ....++++|+++.+....+ ..+++|+|+
T Consensus 55 i~~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i~~s 134 (311)
T 2z2u_A 55 CTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAIS 134 (311)
T ss_dssp EESCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEEEEC
T ss_pred eccChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEEEEe
Confidence 4457 7999999999966421 1234788998876654421 125789999
Q ss_pred -eeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccch-HHHHHHhcCCC--CC
Q 017200 181 -SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHR--AN 256 (375)
Q Consensus 181 -sgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv-~rl~~~mr~r~--~s 256 (375)
||+.--.+ ++.++++.+++. ++.+.+.+-.. .++.++.| |++.+.+.+++. ++++++++ +. .+
T Consensus 135 ~gGEPll~~-----~l~~li~~~~~~--g~~~~l~TNG~--~~~~l~~L---~~~~v~isld~~~~~~~~~i~-~~~~~~ 201 (311)
T 2z2u_A 135 LSGEPTLYP-----YLDELIKIFHKN--GFTTFVVSNGI--LTDVIEKI---EPTQLYISLDAYDLDSYRRIC-GGKKEY 201 (311)
T ss_dssp SSSCGGGST-----THHHHHHHHHHT--TCEEEEEECSC--CHHHHHHC---CCSEEEEECCCSSTTTC-----CCCHHH
T ss_pred CCcCccchh-----hHHHHHHHHHHC--CCcEEEECCCC--CHHHHHhC---CCCEEEEEeecCCHHHHHHHh-CCccch
Confidence 55422112 377888888775 56666655433 24555544 788899999986 58999998 44 67
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCC-CCC-CCCccccCCHHHHHHH
Q 017200 257 FKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRP-SKR-HMPVSEYITPEAFERY 334 (375)
Q Consensus 257 ~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P-~~~-~~~v~~~v~pe~~~~l 334 (375)
+++.++.++.+++ .| .+...+++.-|+++ |+.+.++++++++++.+.+.+|++- ..+ .+......+++++..+
T Consensus 202 ~~~v~~~i~~l~~---~g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~ 276 (311)
T 2z2u_A 202 WESILNTLDILKE---KK-RTCIRTTLIRGYND-DILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKL 276 (311)
T ss_dssp HHHHHHHHHHHTT---SS-SEEEEEEECTTTTC-CGGGTHHHHHHHTCSEEEEEECC------------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHh---cC-CEEEEEEEECCcch-hHHHHHHHHHHcCCCEEEEEeeEEccccccccccccCCCHHHHHHH
Confidence 9999999999988 45 55555555457777 8999999999999999999878632 111 1222234567766666
Q ss_pred HHHHHH-hhhhhhccchhhh
Q 017200 335 RALGME-MGFRYVASGPMVR 353 (375)
Q Consensus 335 ~~~a~~-~gf~~~~sgp~vr 353 (375)
.....+ .|+.+....|..|
T Consensus 277 ~~~l~~~~g~~~~~~~~~~~ 296 (311)
T 2z2u_A 277 AKMLDENSSYKLIDDSEDSR 296 (311)
T ss_dssp HHHHHTSSSEEEEEEEGGGT
T ss_pred HHHHHHhcCceEEeccCcce
Confidence 555544 6877664445444
No 10
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.13 E-value=1.6e-09 Score=109.25 Aligned_cols=162 Identities=15% Similarity=0.209 Sum_probs=115.4
Q ss_pred EEeeeCCccCCCCcCCCCCCCCC-C-CCCCcchHHHHHHHHHh-cCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC
Q 017200 131 TIMILGDTCTRGCRFCNVKTSRA-P-PPPDPDEPTNVAEAIAS-WGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP 207 (375)
Q Consensus 131 tfm~i~d~C~~~C~FC~v~~~r~-~-~~ld~eEi~~~a~al~~-~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p 207 (375)
..+.++++|+.+|+||......+ . ..++.+++.+.++.+.+ .|+++|+||||+---.+| ..+.++++.+++. +
T Consensus 117 v~l~vT~~Cnl~C~yC~~~~~~~~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d---~~L~~il~~l~~~-~ 192 (416)
T 2a5h_A 117 VLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSD---ETLEYIIAKLREI-P 192 (416)
T ss_dssp EEEEEESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCH---HHHHHHHHHHHTS-T
T ss_pred EEEecCCCccccCcCCCCcccCCCccCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCH---HHHHHHHHHHHhc-C
Confidence 34556899999999998765322 2 24889999999999988 799999999987433332 3477888888764 4
Q ss_pred Cc-EEEeec------CCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017200 208 NM-LIEALV------PDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (375)
Q Consensus 208 ~i-~Ie~l~------pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~ 280 (375)
++ .|.+.+ |... +.+.++.|+++ +.+..++++... +.+ + ++.++.++.+++ .|+.+...
T Consensus 193 ~v~~i~i~Tng~~~~p~~i-t~e~l~~L~~~--~~v~Isl~~~~~--~ei-----~-~~v~~ai~~L~~---aGi~v~i~ 258 (416)
T 2a5h_A 193 HVEIVRIGSRTPVVLPQRI-TPELVNMLKKY--HPVWLNTHFNHP--NEI-----T-EESTRACQLLAD---AGVPLGNQ 258 (416)
T ss_dssp TCCEEEEECSHHHHCGGGC-CHHHHHHHGGG--CSEEEEECCCSG--GGC-----C-HHHHHHHHHHHH---TTCCEEEE
T ss_pred CccEEEEEecccccccccC-CHHHHHHHHhc--CcEEEEEecCCH--HHH-----h-HHHHHHHHHHHH---cCCEEEEE
Confidence 33 343322 2222 67889999887 556666654321 122 2 788999999998 46766555
Q ss_pred EEE--ecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 281 IML--GCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 281 imv--GlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.++ |+.++.+++.+.++.+.++|++...+.
T Consensus 259 ~vll~GvNd~~e~l~~l~~~l~~lgv~~~~i~ 290 (416)
T 2a5h_A 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIY 290 (416)
T ss_dssp EECCTTTTCSHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHcCCceEEEe
Confidence 444 888999999999999999999876553
No 11
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.09 E-value=1.5e-09 Score=109.28 Aligned_cols=201 Identities=10% Similarity=0.120 Sum_probs=136.4
Q ss_pred eCCccCCCCcCCCCCCCCCCCCCCcchHHHHHHHHHh----------cCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHH
Q 017200 135 LGDTCTRGCRFCNVKTSRAPPPPDPDEPTNVAEAIAS----------WGLDYVVITSVDRDDLADQGSGHFAQTVRKLKE 204 (375)
Q Consensus 135 i~d~C~~~C~FC~v~~~r~~~~ld~eEi~~~a~al~~----------~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~ 204 (375)
.+.+|+.+|.||.-........++++||++.+..+.. .+++.|+++|+--|-+- .+.+.++++.+++
T Consensus 121 sq~GCnl~C~fC~tg~~g~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPLln---~d~v~~~i~~lk~ 197 (404)
T 3rfa_A 121 SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN---LNNVVPAMEIMLD 197 (404)
T ss_dssp CEEECSSCCTTCGGGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGC---HHHHHHHHHHHHS
T ss_pred eCCCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCcccC---HHHHHHHHHHHHh
Confidence 3679999999998764321224899999998876643 25789999964223221 4567888888876
Q ss_pred hCCCc-----EEEeecCCCCCChHHHHHHHHcCcccccccccchH-HHHHHhcC--CCCCHHHHHHHHHHHHHhCCC---
Q 017200 205 LKPNM-----LIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVE-ELQSAVRD--HRANFKQSLDVLMMAKDYVPA--- 273 (375)
Q Consensus 205 ~~p~i-----~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~-rl~~~mr~--r~~s~~~~l~vl~~ak~~~p~--- 273 (375)
.. ++ .|.+.+-.+ .+.++.|.+.+...++..+.+.+ ++++++.+ ++++.++.++.++...+....
T Consensus 198 ~~-Gl~~s~r~itlsTnG~---~p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~ 273 (404)
T 3rfa_A 198 DF-GFGLSKRRVTLSTSGV---VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG 273 (404)
T ss_dssp TT-TTCCCGGGEEEEESCC---HHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTT
T ss_pred hc-CcCcCCCceEEECCCc---HHHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcc
Confidence 32 34 555555333 35678888875445667777654 88888874 378899999999655432211
Q ss_pred CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 274 GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 274 Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
.+.+.+-+|=|+.++++|+.+..++++++++ .|.+.+|. |.. .... +...+++.+.+.++..+.|+...
T Consensus 274 ~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~-~VnLIpyn-P~~-~~~~-~~ps~e~i~~f~~iL~~~Gi~vt 342 (404)
T 3rfa_A 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWN-PFP-GAPY-GRSSNSRIDRFSKVLMSYGFTTI 342 (404)
T ss_dssp CEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECC-CCT-TCCC-CBCCHHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEEEEecCCCCCHHHHHHHHHHHHcCCC-cEEEEecc-CCC-CCCC-CCCCHHHHHHHHHHHHHcCCcEE
Confidence 2455666666889999999999999999875 45555553 422 2222 23467889999999999888553
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=98.30 E-value=8.4e-06 Score=71.78 Aligned_cols=161 Identities=7% Similarity=0.074 Sum_probs=111.7
Q ss_pred cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccch-HHHHHHhcCC
Q 017200 175 DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDH 253 (375)
Q Consensus 175 ~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv-~rl~~~mr~r 253 (375)
..|+||||+.--. .+.+.++++.+++. ++.+.+.+-.+. ..+.++.|.+. +|.+...+++. ++.+.++++
T Consensus 5 ~~v~~tGGEPll~----~~~~~~l~~~~~~~--g~~~~l~TNG~l-~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g- 75 (182)
T 3can_A 5 GGVTFCGGEPLLH----PEFLIDILKRCGQQ--GIHRAVDTTLLA-RKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD- 75 (182)
T ss_dssp CCEEECSSTGGGS----HHHHHHHHHHHHHT--TCCEEEECTTCC-CHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-
T ss_pred CEEEEEcccccCC----HHHHHHHHHHHHHC--CCcEEEECCCCC-CHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-
Confidence 5789999863211 22235888888874 466666654443 57888888887 88888888876 688999983
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CC-cEEeeecCCCCCCCC--------CCcc
Q 017200 254 RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GV-DVMTFGQYMRPSKRH--------MPVS 323 (375)
Q Consensus 254 ~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel-gv-d~v~i~qYl~P~~~~--------~~v~ 323 (375)
.+++..++.++.+++.... +.+.+.++=|+.++.+++.+.+++++++ ++ ..+.+.+|. |..+. .++.
T Consensus 76 -~~~~~i~~~i~~l~~~g~~-v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~-p~g~~~~~~l~~~y~~~ 152 (182)
T 3can_A 76 -VPNELILKNIRRVAEADFP-YYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYH-DIGKGKHAKLGSIYNPK 152 (182)
T ss_dssp -SCSHHHHHHHHHHHHTTCC-EEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECC-C----------------
T ss_pred -CCHHHHHHHHHHHHhCCCe-EEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCc-ccCHHHHHHhCCcCccc
Confidence 4579999999999884222 3455555667778999999999999999 98 888887665 52211 1121
Q ss_pred c--cCCHHH--HHHHHHHHHHhhhhhhc
Q 017200 324 E--YITPEA--FERYRALGMEMGFRYVA 347 (375)
Q Consensus 324 ~--~v~pe~--~~~l~~~a~~~gf~~~~ 347 (375)
. ..++++ .+.+.+++.+.|+.++.
T Consensus 153 ~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 153 GYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp --CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 1 234566 89999999999987654
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.86 E-value=5.8e-05 Score=72.45 Aligned_cols=145 Identities=14% Similarity=0.195 Sum_probs=105.5
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.++.++.++.++++.+.|+++|-+++...+. .|- .....++++.+++ .|++.+.++.+ +.+.++...++|+|
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~-~~~~~~~~l~~----~~~~i~~a~~ag~~ 95 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQ--MGDHTEVLKGIQK-FPGINYPVLTP----NLKGFEAAVAAGAK 95 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGG--GTTHHHHHHHSCC-CTTCBCCEECC----SHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--cCCHHHHHHHHhh-CCCCEEEEEcC----CHHhHHHHHHCCCC
Confidence 4889999999999999999999999875543 231 1123456666655 46777666664 56789999999999
Q ss_pred cccccccchH-HHHHHhcC-CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-C-----CHHHHHHHHHHHHHcCCcE
Q 017200 235 VFAHNIETVE-ELQSAVRD-HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-E-----TPDQVVSTMEKVRAAGVDV 306 (375)
Q Consensus 235 v~~hnlEtv~-rl~~~mr~-r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-E-----T~ee~~etl~~Lrelgvd~ 306 (375)
.+....-+++ .....++. +...++...+.++.+++ .|+.+..+++.-+| | +.+++.+.++.+.++|++.
T Consensus 96 ~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~---~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~ 172 (298)
T 2cw6_A 96 EVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS---ANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYE 172 (298)
T ss_dssp EEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH---TTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH---CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9888766666 44455541 12233455556677777 57888888886652 3 6889999999999999999
Q ss_pred Eeee
Q 017200 307 MTFG 310 (375)
Q Consensus 307 v~i~ 310 (375)
|.+.
T Consensus 173 i~l~ 176 (298)
T 2cw6_A 173 ISLG 176 (298)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9885
No 14
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=97.64 E-value=9.7e-05 Score=73.30 Aligned_cols=163 Identities=11% Similarity=0.109 Sum_probs=95.4
Q ss_pred EeeeCCccCCCCcCCCCCCC-C-CCC---CCCcchHHHHHHH-HHhcCCc-EEEEEeeeCCCCCccc-HHHHHHHHHHHH
Q 017200 132 IMILGDTCTRGCRFCNVKTS-R-APP---PPDPDEPTNVAEA-IASWGLD-YVVITSVDRDDLADQG-SGHFAQTVRKLK 203 (375)
Q Consensus 132 fm~i~d~C~~~C~FC~v~~~-r-~~~---~ld~eEi~~~a~a-l~~~G~~-eIvLTsgdr~dl~d~G-~~~~~~lir~Ik 203 (375)
.+....||..+|.||-.... + .+. ..+.+|+++.++. +.+.+-+ .++-+|.+.|-++-.. ....-++|+.+.
T Consensus 110 ~ln~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpyp~E~~~~ltr~~le~l~ 189 (368)
T 4fhd_A 110 AIPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAIEFIG 189 (368)
T ss_dssp ECCSEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHHHHHTTTCHHHHHHHHHH
T ss_pred eeCCccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcchhhHHHhHHHHHHHHHH
Confidence 35567899999999987642 1 121 2577888887654 4443333 3445555544443111 112335555554
Q ss_pred HhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE
Q 017200 204 ELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML 283 (375)
Q Consensus 204 ~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv 283 (375)
+ ++...+++.+=.- +.+.|..+...|.-.+...+-+ +++.+.+-|+..+.+++|++++.+++ +|+.|...|.=
T Consensus 190 ~-~~~~~v~i~TKs~--lid~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~---aGipv~v~iaP 262 (368)
T 4fhd_A 190 A-TDYGRLRFVTKYE--HVDHLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAG---AGYKLGFVVAP 262 (368)
T ss_dssp H-CSSEEEEEEESCC--CCGGGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHH---TTCEEEEEEEE
T ss_pred h-CCCceEEEEeCCc--CHHHHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHH---CCCeEEEEEeC
Confidence 4 4556666665321 1122322322232233333433 68888888888899999999999999 68765554443
Q ss_pred ec-CCCH-HHHHHHHHHHHH
Q 017200 284 GC-GETP-DQVVSTMEKVRA 301 (375)
Q Consensus 284 Gl-GET~-ee~~etl~~Lre 301 (375)
=+ ++++ ++..+.++.|.+
T Consensus 263 IiP~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 263 IYRHEGWERGYFELFQELAR 282 (368)
T ss_dssp ECCCTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHH
Confidence 35 7776 466666765554
No 15
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.63 E-value=0.0005 Score=66.03 Aligned_cols=142 Identities=20% Similarity=0.291 Sum_probs=103.7
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.++.++.+..++++.+.|+++|-+.+...+. .+- .....++++.+.+ .+++.+.++.+ +.+.++...++|.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~--~~d~~~~~~~~~~-~~~~~~~~l~~----~~~~i~~a~~aG~~ 98 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQ--MAGSAEVFAGIRQ-RPGVTYAALAP----NLKGFEAALESGVK 98 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCC-CTTSEEEEECC----SHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--ccCHHHHHHHhhh-cCCCEEEEEeC----CHHHHHHHHhCCcC
Confidence 4789999999999999999999998864432 332 1223456666654 37788887775 56889999999999
Q ss_pred cccccccchH-HHHHHhcCCCCCHHHH----HHHHHHHHHhCCCCceEEEeEEEecC-C-----CHHHHHHHHHHHHHcC
Q 017200 235 VFAHNIETVE-ELQSAVRDHRANFKQS----LDVLMMAKDYVPAGTLTKTSIMLGCG-E-----TPDQVVSTMEKVRAAG 303 (375)
Q Consensus 235 v~~hnlEtv~-rl~~~mr~r~~s~~~~----l~vl~~ak~~~p~Gl~tkt~imvGlG-E-----T~ee~~etl~~Lrelg 303 (375)
++....-+++ .....++ .++++. .++++.+|+ .|+.+...++.-+| | +.+++.+.++.+.+.|
T Consensus 99 ~v~i~~~~s~~~~~~~~~---~s~ee~l~~~~~~v~~a~~---~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G 172 (302)
T 2ftp_A 99 EVAVFAAASEAFSQRNIN---CSIKDSLERFVPVLEAARQ---HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG 172 (302)
T ss_dssp EEEEEEESCHHHHHHHHS---SCHHHHHHHHHHHHHHHHH---TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT
T ss_pred EEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC
Confidence 8876555555 3445554 355555 455567777 57888888876554 3 6788999999999999
Q ss_pred CcEEeee
Q 017200 304 VDVMTFG 310 (375)
Q Consensus 304 vd~v~i~ 310 (375)
+|.+.+.
T Consensus 173 ~d~i~l~ 179 (302)
T 2ftp_A 173 CYEVSLG 179 (302)
T ss_dssp CSEEEEE
T ss_pred CCEEEEe
Confidence 9999884
No 16
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.61 E-value=0.00028 Score=68.24 Aligned_cols=142 Identities=18% Similarity=0.211 Sum_probs=105.1
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.++.++.++.++++.+.|+++|-+++...+. .|- .....+.++.+++. +++.+.++.+ +.+.++...++|++
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~~-~~~~~~~l~~----~~~~i~~a~~~g~~ 96 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPA--LRDAIDVAKGIDRE-KGVTYAALVP----NQRGLENALEGGIN 96 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTCEEEEECC----SHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccc--cCCHHHHHHHhhhc-CCCeEEEEeC----CHHhHHHHHhCCcC
Confidence 4789999999999999999999999865432 231 11123556666543 7888888876 46779999999999
Q ss_pred cccccccchHH-HHHHhcCCCCCHHHH----HHHHHHHHHhCCCCceEEEeEEEecC-C-----CHHHHHHHHHHHHHcC
Q 017200 235 VFAHNIETVEE-LQSAVRDHRANFKQS----LDVLMMAKDYVPAGTLTKTSIMLGCG-E-----TPDQVVSTMEKVRAAG 303 (375)
Q Consensus 235 v~~hnlEtv~r-l~~~mr~r~~s~~~~----l~vl~~ak~~~p~Gl~tkt~imvGlG-E-----T~ee~~etl~~Lrelg 303 (375)
.+....-+++. ....++ .+.++. .++++.+++ .|+.+..+++.-+| | +.+.+++.++.+.+.|
T Consensus 97 ~v~i~~~~sd~~~~~~l~---~s~~e~l~~~~~~v~~ak~---~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (307)
T 1ydo_A 97 EACVFMSASETHNRKNIN---KSTSESLHILKQVNNDAQK---ANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG 170 (307)
T ss_dssp EEEEEEESSHHHHHTTTC---SCHHHHHHHHHHHHHHHHH---TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred EEEEEeecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC
Confidence 98877666652 333333 455554 566677777 57888888888774 3 6789999999999999
Q ss_pred CcEEeee
Q 017200 304 VDVMTFG 310 (375)
Q Consensus 304 vd~v~i~ 310 (375)
++.|.+.
T Consensus 171 a~~i~l~ 177 (307)
T 1ydo_A 171 ISELSLG 177 (307)
T ss_dssp CSCEEEE
T ss_pred CCEEEEc
Confidence 9999884
No 17
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.61 E-value=0.00037 Score=66.57 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=102.9
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCC-CcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl-~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.++.++.++.++++.+.|++.|-+++...+.+ |- .....+.++.+++. +++.+.++.+ +.+.++...++|++
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~~~~e~~~~i~~~-~~~~v~~l~~----n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQ--LADSREVMAGIRRA-DGVRYSVLVP----NMKGYEAAAAAHAD 94 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-SSSEEEEECS----SHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCcccccc--ccCHHHHHHHHHhC-CCCEEEEEeC----CHHHHHHHHHCCCC
Confidence 48899999999999999999999988544332 21 11245777777654 6788877774 56889999999999
Q ss_pred cccccccchHHHHHHhcCCCCCHHHHH----HHHHHHHHhCCCCceEEEeEEEec------CCCHHHHHHHHHHHHHcCC
Q 017200 235 VFAHNIETVEELQSAVRDHRANFKQSL----DVLMMAKDYVPAGTLTKTSIMLGC------GETPDQVVSTMEKVRAAGV 304 (375)
Q Consensus 235 v~~hnlEtv~rl~~~mr~r~~s~~~~l----~vl~~ak~~~p~Gl~tkt~imvGl------GET~ee~~etl~~Lrelgv 304 (375)
.+...+.+++...+. + -+.++++.+ ++++.+++ .|+.+...++.-+ --+.+++.+.++.+.+.|+
T Consensus 95 ~V~i~~~~S~~h~~~-~-~~~~~~e~~~~~~~~v~~a~~---~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~ 169 (295)
T 1ydn_A 95 EIAVFISASEGFSKA-N-INCTIAESIERLSPVIGAAIN---DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGC 169 (295)
T ss_dssp EEEEEEESCHHHHHH-H-TSSCHHHHHHHHHHHHHHHHH---TTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCHHHHHH-H-cCCCHHHHHHHHHHHHHHHHH---cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCC
Confidence 887765555532222 1 123555554 55788888 5788876666433 1367889999999999999
Q ss_pred cEEeee
Q 017200 305 DVMTFG 310 (375)
Q Consensus 305 d~v~i~ 310 (375)
+.+.+.
T Consensus 170 d~i~l~ 175 (295)
T 1ydn_A 170 HEVSLG 175 (295)
T ss_dssp SEEEEE
T ss_pred CEEEec
Confidence 999885
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.12 E-value=0.0022 Score=62.69 Aligned_cols=138 Identities=21% Similarity=0.211 Sum_probs=99.5
Q ss_pred CCCcchHHHHHH-HHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHH------hCCCcEEEeecCCCCCChHHHHHH
Q 017200 156 PPDPDEPTNVAE-AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKE------LKPNMLIEALVPDFRGNNGCVREV 228 (375)
Q Consensus 156 ~ld~eEi~~~a~-al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~------~~p~i~Ie~l~pd~~g~~e~l~~L 228 (375)
.++.++.++.++ ++.+.|+++|-+.+.... ++ . .+.|+++++ ..|++.+.++.+.. ..++..
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~--~~-~----~~~v~~~~~~~~~~~~~~~~~i~~l~~~~----~~i~~a 105 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVS--KG-E----LETVQKIMEWAATEQLTERIEILGFVDGN----KTVDWI 105 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSC--TT-H----HHHHHHHHHHHHHTTCGGGEEEEEESSTT----HHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCC--hh-H----HHHHHHHHhhhhhhccCCCCeEEEEccch----hhHHHH
Confidence 478999999999 999999999998876431 11 1 234444544 34677888887753 368889
Q ss_pred HHcCcccccccccchH-HHHHHhcCCCCCHHHHH----HHHHHHHHhCCCCceEEEeEEE---ecCCCHHHHHHHHHHHH
Q 017200 229 AKSGLNVFAHNIETVE-ELQSAVRDHRANFKQSL----DVLMMAKDYVPAGTLTKTSIML---GCGETPDQVVSTMEKVR 300 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~-rl~~~mr~r~~s~~~~l----~vl~~ak~~~p~Gl~tkt~imv---GlGET~ee~~etl~~Lr 300 (375)
.++|+|.+.....+++ .....++ .+.++.+ +.++.+++ .|+.+..+++- +.--+.+.+++.++.+.
T Consensus 106 ~~~g~~~v~i~~~~s~~~~~~~~~---~s~~e~l~~~~~~v~~ak~---~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (337)
T 3ble_A 106 KDSGAKVLNLLTKGSLHHLEKQLG---KTPKEFFTDVSFVIEYAIK---SGLKINVYLEDWSNGFRNSPDYVKSLVEHLS 179 (337)
T ss_dssp HHHTCCEEEEEEECSHHHHHHHTC---CCHHHHHHHHHHHHHHHHH---TTCEEEEEEETHHHHHHHCHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCEEEEEEEECCCCCcCCHHHHHHHHHHHH
Confidence 9999999888777777 4555554 3555555 55566677 57777766654 33345888999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
+.|++.|.+.
T Consensus 180 ~~Ga~~i~l~ 189 (337)
T 3ble_A 180 KEHIERIFLP 189 (337)
T ss_dssp TSCCSEEEEE
T ss_pred HcCCCEEEEe
Confidence 9999999884
No 19
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=96.86 E-value=0.015 Score=56.44 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=95.8
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHH----HHHHc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVR----EVAKS 231 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~----~L~~a 231 (375)
.++.++.++.++++.+.|+++|-+.+ +... ...+ +.++.|.+..+++.+.++.+. +.+-++ .+..+
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~---p~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~---~~~~i~~a~~al~~a 93 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGF---PVSS---PGDF-NSVVEITKAVTRPTICALTRA---KEADINIAGEALRFA 93 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEEC---TTSC---HHHH-HHHHHHHHHCCSSEEEEECCS---CHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC---HhHH-HHHHHHHHhCCCCEEEEeecC---CHHHHHHHHHhhccc
Confidence 48899999999999999999998874 2211 1223 456777777788898888643 334444 44445
Q ss_pred CcccccccccchH-HHHHHhc-CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 232 GLNVFAHNIETVE-ELQSAVR-DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 232 Gldv~~hnlEtv~-rl~~~mr-~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
|.+.+...+-+++ .....++ ++....+...++++.+++ .|+.+.-+...+.--+.+.+++.++.+.+.|++.|.+
T Consensus 94 g~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~---~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 94 KRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKK---VVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp SSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHT---TSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH---CCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEe
Confidence 9998887766666 3333333 234455666778888888 4676655555444446667779999999999999887
Q ss_pred e
Q 017200 310 G 310 (375)
Q Consensus 310 ~ 310 (375)
.
T Consensus 171 ~ 171 (325)
T 3eeg_A 171 P 171 (325)
T ss_dssp C
T ss_pred c
Confidence 3
No 20
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.82 E-value=0.016 Score=55.46 Aligned_cols=142 Identities=11% Similarity=0.115 Sum_probs=96.2
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC-hHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~-~e~l~~L~~aGld 234 (375)
.++.++.++.++.+.+.|+++|-+++... -+ .. .+.++.+.+..+++.+.++.+....+ +..++.++++|.+
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~--~~----~d-~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPIS--SP----GD-FECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGG--CH----HH-HHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC--Cc----cH-HHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCC
Confidence 48999999999999999999999876321 11 11 23467777777889998888642101 2233444557988
Q ss_pred cccccccchH-HHHHHhcCCCCCHHHHHHHH----HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 235 VFAHNIETVE-ELQSAVRDHRANFKQSLDVL----MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 235 v~~hnlEtv~-rl~~~mr~r~~s~~~~l~vl----~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
.+...+-+++ .....+ +.+.++.++.+ +.+++ .|+.+.-++..+.--+.+.+++.++.+.+.|++.|.+
T Consensus 96 ~v~i~~~~Sd~~~~~nl---~~s~~e~l~~~~~~v~~a~~---~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 169 (293)
T 3ewb_X 96 QIHIFLATSDVHMEYKL---KMSRAEVLASIKHHISYARQ---KFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINI 169 (293)
T ss_dssp EEEEEEECSHHHHHHTT---CCCHHHHHHHHHHHHHHHHT---TCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEecCcHHHHHHHh---CCCHHHHHHHHHHHHHHHHh---CCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 8887666666 444444 35677766555 45555 4666665555433346677889999999999999988
Q ss_pred e
Q 017200 310 G 310 (375)
Q Consensus 310 ~ 310 (375)
.
T Consensus 170 ~ 170 (293)
T 3ewb_X 170 P 170 (293)
T ss_dssp E
T ss_pred c
Confidence 4
No 21
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.61 E-value=0.0095 Score=58.16 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=91.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEE-----eeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEee-cCCCCCChHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVIT-----SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEAL-VPDFRGNNGCVREVA 229 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLT-----sgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l-~pd~~g~~e~l~~L~ 229 (375)
.++.++.++.++++.+.|+++|-+. ++-.++..-. ...-.+.++.+++..|++.+.++ .|.. +..+.++...
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~-~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFG-RHTDLEYIEAVAGEISHAQIATLLLPGI-GSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCC-SSCHHHHHHHHHTTCSSSEEEEEECBTT-BCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCC-CCCHHHHHHHHHhhCCCCEEEEEecCCc-ccHHHHHHHH
Confidence 4889999999999999999999985 2222221000 11135678888777788888887 6643 3678899999
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
++|+|.+....... ..+...+.++.+++. |+.+...++-...-+++.+.+.++.+.+.|++.|.+
T Consensus 104 ~aGvd~v~I~~~~s------------~~~~~~~~i~~ak~~---G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 104 QAGARVVRVATHCT------------EADVSKQHIEYARNL---GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHTCCEEEEEEETT------------CGGGGHHHHHHHHHH---TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCcCEEEEEEecc------------HHHHHHHHHHHHHHC---CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 99999875542111 113345566666663 566665555555556677777777777777777766
No 22
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=96.41 E-value=0.033 Score=56.07 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=96.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
+++.++-++.++++.+.|+++|-+.+ +... ....+.++.|.+......+-.+. ..+.+.++...++|++.
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~---P~as----p~d~~~~~~i~~~~~~~~v~~~~---r~~~~di~~A~~aG~~~ 126 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTS---PVAS----EQSRQDCEAICKLGLKCKILTHI---RCHMDDARVAVETGVDG 126 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC---TTSC----HHHHHHHHHHHTSCCSSEEEEEE---ESCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEee---cccC----HHHHHHHHHHHhcCCCCEEEEee---ccChhhHHHHHHcCCCE
Confidence 58999999999999999999998875 2211 12345566666543333332211 12566789999999998
Q ss_pred ccccccchHHHHH-Hhc-CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 236 FAHNIETVEELQS-AVR-DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 236 ~~hnlEtv~rl~~-~mr-~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+...+-+++-..+ .++ ++....+...++++.|++ .|+.+.-++.-++.-+.+.+++.++.+.+.|++.|.+.
T Consensus 127 V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~---~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 127 VDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKS---KGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp EEEEEEC-------------CHHHHHHHHHHHHHHT---TTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHH---CCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccC
Confidence 8877777662221 222 112224566678888888 57888888887888889999999999999999998883
No 23
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=96.05 E-value=0.03 Score=55.36 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=95.6
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHH----HHHHHc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCV----REVAKS 231 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l----~~L~~a 231 (375)
.++.++-++.++++.+.|+++|-+.+-. .. ... .+.++.+.+..++..+.++.+- +.+.+ +.++.+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~---~~---~~d-~e~v~~i~~~~~~~~i~~l~r~---~~~di~~a~~al~~a 99 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAA---AS---PGD-FEAVNAIAKTITKSTVCSLSRA---IERDIRQAGEAVAPA 99 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGG---GC---HHH-HHHHHHHHTTCSSSEEEEEEES---SHHHHHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCC---CC---HHH-HHHHHHHHHhCCCCeEEEEecC---CHHHHHHHHHHHhhC
Confidence 4899999999999999999999877521 11 111 3456667666778888887742 33334 444559
Q ss_pred CcccccccccchH-HHHHHhcCCCCCHHHHHHHH----HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcE
Q 017200 232 GLNVFAHNIETVE-ELQSAVRDHRANFKQSLDVL----MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDV 306 (375)
Q Consensus 232 Gldv~~hnlEtv~-rl~~~mr~r~~s~~~~l~vl----~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~ 306 (375)
|.+.+...+-+++ .+...++ .+.++.++.+ +.+++ .|..+.-+...+.--+.+.+++.++.+.+.|++.
T Consensus 100 g~~~v~if~~~Sd~h~~~~l~---~s~~e~l~~~~~~v~~a~~---~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~ 173 (370)
T 3rmj_A 100 PKKRIHTFIATSPIHMEYKLK---MKPKQVIEAAVKAVKIARE---YTDDVEFSCEDALRSEIDFLAEICGAVIEAGATT 173 (370)
T ss_dssp SSEEEEEEEECSHHHHHHTTC---CCHHHHHHHHHHHHHHHTT---TCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEecCcHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---cCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCE
Confidence 9999888777777 4444544 4677776665 45555 4555544444444456677889999999999999
Q ss_pred Eeee
Q 017200 307 MTFG 310 (375)
Q Consensus 307 v~i~ 310 (375)
|.+.
T Consensus 174 i~l~ 177 (370)
T 3rmj_A 174 INIP 177 (370)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9884
No 24
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.03 E-value=0.043 Score=56.87 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=94.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeC-----CC-CCcccHHHHHHHHHHHHHhCCCcEEEeec--CCCCC-------
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-----DD-LADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr-----~d-l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd~~g------- 220 (375)
.++.++.++.++++.+.|+++|-+.++-. .- .+| =.+.++.|++..|++.+.++. ++..|
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d-----~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypdd 117 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNED-----PWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDE 117 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCC-----HHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCC-----HHHHHHHHHHhCCCCEEEEEeccccccCcccCccc
Confidence 47899999999999999999999998632 00 112 135567777667888888876 22222
Q ss_pred -ChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE--EEecCCCHHHHHHHHH
Q 017200 221 -NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI--MLGCGETPDQVVSTME 297 (375)
Q Consensus 221 -~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~i--mvGlGET~ee~~etl~ 297 (375)
....++...++|+|++....-+.+ .+...+.++.+++ .|..+...+ ..|..-+.+.+++.++
T Consensus 118 v~~~~ve~a~~aGvd~vrIf~s~sd------------~~ni~~~i~~ak~---~G~~v~~~i~~~~~~~~~~e~~~~~a~ 182 (539)
T 1rqb_A 118 VVDRFVDKSAENGMDVFRVFDAMND------------PRNMAHAMAAVKK---AGKHAQGTICYTISPVHTVEGYVKLAG 182 (539)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHH---TTCEEEEEEECCCSTTCCHHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCEEEEEEehhH------------HHHHHHHHHHHHH---CCCeEEEEEEeeeCCCCCHHHHHHHHH
Confidence 245678889999998775432222 2344577788888 466665555 4455668888889999
Q ss_pred HHHHcCCcEEeee
Q 017200 298 KVRAAGVDVMTFG 310 (375)
Q Consensus 298 ~Lrelgvd~v~i~ 310 (375)
.+.+.|++.|.|.
T Consensus 183 ~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 183 QLLDMGADSIALK 195 (539)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCCEEEeC
Confidence 9999999888773
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=95.95 E-value=0.062 Score=54.71 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=93.7
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCC-----C-CCcccHHHHHHHHHHHHHhCCCcEEEeec--CCCCC-------
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRD-----D-LADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~-----d-l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd~~g------- 220 (375)
.++.++.++.++++.+.|+++|-+.++-.- - -+| -.+.++.|++..|++.+.+++ ++..|
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d-----~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~dd 100 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGED-----PWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADD 100 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCC-----HHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCC-----HHHHHHHHHHhCCCCeEEEEeccccccCcccccch
Confidence 478899999999999999999999885310 0 122 145677777767888888776 33322
Q ss_pred -ChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE--EEecCCCHHHHHHHHH
Q 017200 221 -NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI--MLGCGETPDQVVSTME 297 (375)
Q Consensus 221 -~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~i--mvGlGET~ee~~etl~ 297 (375)
....++...++|+|++....-+.+ .+...+.++.+++ .|..+..++ ..|.--+.+.+++.++
T Consensus 101 v~~~~v~~a~~~Gvd~i~if~~~sd------------~~ni~~~i~~ak~---~G~~v~~~i~~~~~~~~~~e~~~~~a~ 165 (464)
T 2nx9_A 101 VVDTFVERAVKNGMDVFRVFDAMND------------VRNMQQALQAVKK---MGAHAQGTLCYTTSPVHNLQTWVDVAQ 165 (464)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHH---TTCEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHhCCcCEEEEEEecCH------------HHHHHHHHHHHHH---CCCEEEEEEEeeeCCCCCHHHHHHHHH
Confidence 145578888999998765432222 2344567788888 466665555 4455567888889999
Q ss_pred HHHHcCCcEEeee
Q 017200 298 KVRAAGVDVMTFG 310 (375)
Q Consensus 298 ~Lrelgvd~v~i~ 310 (375)
.+.+.|++.|.|.
T Consensus 166 ~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 166 QLAELGVDSIALK 178 (464)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHCCCCEEEEc
Confidence 9999999888773
No 26
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=95.39 E-value=0.14 Score=50.63 Aligned_cols=140 Identities=13% Similarity=0.187 Sum_probs=96.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.++.++.++.++++.+.|+++|-+.+. .. .....+.++.|++..+...+..+. ++..+.++...++|++.
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p---~~----~~~~~~~~~~i~~~~~~~~v~~~~---r~~~~di~~a~~~g~~~ 90 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTP---VA----SPQSRKDAEVLASLGLKAKVVTHI---QCRLDAAKVAVETGVQG 90 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCT---TS----CHHHHHHHHHHHTSCCSSEEEEEE---ESCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCC---cC----CHHHHHHHHHHHhcCCCcEEEEEc---ccChhhHHHHHHcCCCE
Confidence 588999999999999999999988652 11 122456777777665555554432 12456689999999998
Q ss_pred ccccccchHHHHHHhcCCCCCHHH----HHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQ----SLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~----~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+...+-+++-....+ +.+.++ ..+.++.+++..+. +.+.-++.-++.-+.+.+++.++.+.+. ++.|.+.
T Consensus 91 v~i~~~~s~~~~~~~---~~s~~e~l~~~~~~v~~ak~~g~~-~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~ 164 (382)
T 2ztj_A 91 IDLLFGTSKYLRAPH---GRDIPRIIEEAKEVIAYIREAAPH-VEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLA 164 (382)
T ss_dssp EEEEECC-----------CCCHHHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEE
T ss_pred EEEEeccCHHHHHHh---CCCHHHHHHHHHHHHHHHHHcCCC-EEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEec
Confidence 887666665222233 345544 56667778884211 7777777767777889999999999999 9998883
No 27
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.56 E-value=0.55 Score=43.07 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.+..++++.+.|++-|-+|.-. ++ -.+.|+.|++.+|++.|.+=+ .. +.+.++...++|.+.+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t----~~-----a~~~I~~l~~~~p~~~IGAGT--Vl-t~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRT----EA-----GLAAISAIKKAVPEAIVGAGT--VC-TADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHHHHHCTTSEEEEEC--CC-SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----cc-----HHHHHHHHHHHCCCCeEeecc--cc-CHHHHHHHHHcCCCEE
Confidence 578999999999999999999988422 11 357889999999988776522 22 7899999999999976
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCc------eEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGT------LTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl------~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+. +..+ -++++.+++. |+ .+-.++ -|.+|+... .++|+|++.+|
T Consensus 90 -------------vs-P~~~----~evi~~~~~~---~v~~~~~~~~~PG~-----~TptE~~~A----~~~Gad~vK~F 139 (217)
T 3lab_A 90 -------------VS-PGLT----PELIEKAKQV---KLDGQWQGVFLPGV-----ATASEVMIA----AQAGITQLKCF 139 (217)
T ss_dssp -------------EE-SSCC----HHHHHHHHHH---HHHCSCCCEEEEEE-----CSHHHHHHH----HHTTCCEEEET
T ss_pred -------------Ee-CCCc----HHHHHHHHHc---CCCccCCCeEeCCC-----CCHHHHHHH----HHcCCCEEEEC
Confidence 22 2222 2566677763 45 555554 499988776 47999999987
Q ss_pred c
Q 017200 311 Q 311 (375)
Q Consensus 311 q 311 (375)
+
T Consensus 140 P 140 (217)
T 3lab_A 140 P 140 (217)
T ss_dssp T
T ss_pred c
Confidence 3
No 28
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.13 E-value=0.92 Score=41.92 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=83.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++....++++.+.|++-|-+|--+ ++ -.+.|++|++.+|++.|.+=+ .. +.+.++...++|.|.+
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t----~~-----a~e~I~~l~~~~~~~~iGaGT--Vl-t~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRS----DA-----AVEAIRLLRQAQPEMLIGAGT--IL-NGEQALAAKEAGATFV 110 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHHHHHCTTCEEEEEC--CC-SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC----CC-----HHHHHHHHHHhCCCCEEeECC--cC-CHHHHHHHHHcCCCEE
Confidence 468999999999999999999987422 11 257888999888887776533 22 6899999999999976
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
- . +..+ .++++.+++. |+.+-.+++ |..|+...+ ++|.|+|.+|+.
T Consensus 111 v-------------s-P~~~----~~vi~~~~~~---gi~~ipGv~-----TptEi~~A~----~~Gad~vK~FPa 156 (232)
T 4e38_A 111 V-------------S-PGFN----PNTVRACQEI---GIDIVPGVN-----NPSTVEAAL----EMGLTTLKFFPA 156 (232)
T ss_dssp E-------------C-SSCC----HHHHHHHHHH---TCEEECEEC-----SHHHHHHHH----HTTCCEEEECST
T ss_pred E-------------e-CCCC----HHHHHHHHHc---CCCEEcCCC-----CHHHHHHHH----HcCCCEEEECcC
Confidence 2 2 2222 3666777773 566555543 999988774 789999999743
No 29
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.56 E-value=0.85 Score=43.32 Aligned_cols=140 Identities=12% Similarity=0.094 Sum_probs=89.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEe-eeCCCCC----cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITS-VDRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTs-gdr~dl~----d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+++++++.|++..+.|.+.|-|-+ ..|+.-. +...+.+..+|+.|++.. ++.|.+=+ + +.+.++.-.+
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT--~--~~~va~aAl~ 108 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDT--S--KPEVIRESAK 108 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEEC--C--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeC--C--CHHHHHHHHH
Confidence 36789999999999999999999888 4555421 122566778888887764 44443322 2 5778888888
Q ss_pred cCccccccc-ccchHHHHHH----------hcCC--CCC--------------HHHHHHHHHHHHHhCCCCce---EEEe
Q 017200 231 SGLNVFAHN-IETVEELQSA----------VRDH--RAN--------------FKQSLDVLMMAKDYVPAGTL---TKTS 280 (375)
Q Consensus 231 aGldv~~hn-lEtv~rl~~~----------mr~r--~~s--------------~~~~l~vl~~ak~~~p~Gl~---tkt~ 280 (375)
+|.+.++.- -+..+++++- |+.+ ..+ .+...+.++.+.+ .|+. +--+
T Consensus 109 aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~---~Gi~~~~IilD 185 (282)
T 1aj0_A 109 VGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQ---AGIAKEKLLLD 185 (282)
T ss_dssp TTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHH---TTCCGGGEEEE
T ss_pred cCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHH---cCCChhhEEEe
Confidence 888877652 1122233322 1111 011 4445566667776 4653 5555
Q ss_pred EEEecCCCHHHHHHHHHHHHHcC
Q 017200 281 IMLGCGETPDQVVSTMEKVRAAG 303 (375)
Q Consensus 281 imvGlGET~ee~~etl~~Lrelg 303 (375)
--+|||.|.++-+++|+.++++.
T Consensus 186 Pg~gf~k~~~~n~~ll~~l~~~~ 208 (282)
T 1aj0_A 186 PGFGFGKNLSHNYSLLARLAEFH 208 (282)
T ss_dssp CCTTSSCCHHHHHHHHHTGGGGG
T ss_pred CCCCcccCHHHHHHHHHHHHHHh
Confidence 55688999998888888777653
No 30
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=92.65 E-value=0.34 Score=46.85 Aligned_cols=137 Identities=9% Similarity=0.072 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCcccHHHH--HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHH---H
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHF--AQTVRKLKELKPNMLIEALVPDFRGNNGCVREV---A 229 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d~G~~~~--~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L---~ 229 (375)
.++.++.++.++++.+.|+++|=+++...+. -.+. .-.| .+.++.|++ .|++.+.+|+|......+.+..+ .
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~-~~~~~~~e~l~~i~~-~~~~~~~~L~r~~~~~~~dv~~~~~a~ 97 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMG-KFGYTPVSVLKHLRN-ISTKKIAIMLNEKNTTPEDLNHLLLPI 97 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC-HHHHCCHHHHHHHHH-HCCSEEEEEEEGGGCCGGGHHHHHGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCcccccc-ccccChHHHHHHHhh-ccCCeEEEEecCCCCChhhHHHHHHhh
Confidence 4789999999999999999999999764321 1111 1112 356677776 48899999876531112223333 3
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHH-HHHHHHHHHHHcCCcEEe
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPD-QVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~e-e~~etl~~Lrelgvd~v~ 308 (375)
++|+|.+..... ..+.++..++++.+++ .|+.+..+++..-+-++. +++..+..+ +.|++.|.
T Consensus 98 ~~Gvd~~ri~~~------------~~nle~~~~~v~~ak~---~G~~v~~~~~~~~~~~~~~~~l~~~~~~-~~G~~~i~ 161 (320)
T 3dxi_A 98 IGLVDMIRIAID------------PQNIDRAIVLAKAIKT---MGFEVGFNVMYMSKWAEMNGFLSKLKAI-DKIADLFC 161 (320)
T ss_dssp TTTCSEEEEEEC------------GGGHHHHHHHHHHHHT---TTCEEEEEECCTTTGGGSTTSGGGGGGG-TTTCSEEE
T ss_pred hcCCCEEEEEec------------HHHHHHHHHHHHHHHH---CCCEEEEEEEeCCCCCCHHHHHHHHHHh-hCCCCEEE
Confidence 467776644210 1236677777777777 466665555542232222 344444433 45777776
Q ss_pred ee
Q 017200 309 FG 310 (375)
Q Consensus 309 i~ 310 (375)
+.
T Consensus 162 l~ 163 (320)
T 3dxi_A 162 MV 163 (320)
T ss_dssp EE
T ss_pred EC
Confidence 63
No 31
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.38 E-value=2.7 Score=39.80 Aligned_cols=138 Identities=13% Similarity=0.083 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCCCC----cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~----d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+++++++.|+++.+.|.+.|-|-|. .++... +.-...+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT--~--~~~va~aAl~ 98 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT--M--RADVARAALQ 98 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC--S--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC--C--CHHHHHHHHH
Confidence 468999999999999999999998873 344311 11256677888888764 44443322 2 5777888888
Q ss_pred cCccccccc-ccc-hHHHHHH----------hcCCC---------CC--------HHHHHHHHHHHHHhCCCCce---EE
Q 017200 231 SGLNVFAHN-IET-VEELQSA----------VRDHR---------AN--------FKQSLDVLMMAKDYVPAGTL---TK 278 (375)
Q Consensus 231 aGldv~~hn-lEt-v~rl~~~----------mr~r~---------~s--------~~~~l~vl~~ak~~~p~Gl~---tk 278 (375)
+|.+.++.- -+. .+++++- |+.++ .. .+...+.++.+.+ .|+. +-
T Consensus 99 aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~---~Gi~~~~Ii 175 (280)
T 1eye_A 99 NGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVA---AGVDPARLV 175 (280)
T ss_dssp TTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEE
T ss_pred cCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHH---cCCChhhEE
Confidence 888877652 111 2233322 11110 11 3334456666666 4653 44
Q ss_pred EeEEEecCCCHHHHHHHHHHHHHc
Q 017200 279 TSIMLGCGETPDQVVSTMEKVRAA 302 (375)
Q Consensus 279 t~imvGlGET~ee~~etl~~Lrel 302 (375)
-+--+|||.|.++=+++|+.++++
T Consensus 176 lDPg~Gf~k~~~~n~~ll~~l~~~ 199 (280)
T 1eye_A 176 LDPGLGFAKTAQHNWAILHALPEL 199 (280)
T ss_dssp EECCTTSSCCHHHHHHHHHTHHHH
T ss_pred EECCCCcccCHHHHHHHHHHHHHh
Confidence 444568999998888888777765
No 32
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=91.99 E-value=3.2 Score=39.23 Aligned_cols=147 Identities=12% Similarity=0.151 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
|++++|+.+.|.+..+.|..-|+|=-=|.+.-+....+.|.++++.|++..|++.|.+.++.-.+..+.-..+.+..+|.
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R~~~~~~~Pe~ 105 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNERGAMLSLRPDM 105 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGGGTTGGGCCSE
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHhhHhhcCCCE
Confidence 68999999999999999998777664443222222367899999999999999999887753111111113334455665
Q ss_pred ccc-----cc---------cchHHHHHHhcCCC-------CCHHHHHHHHHHHHHhCCCCceEEEeEEEec----CCCHH
Q 017200 236 FAH-----NI---------ETVEELQSAVRDHR-------ANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC----GETPD 290 (375)
Q Consensus 236 ~~h-----nl---------Etv~rl~~~mr~r~-------~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl----GET~e 290 (375)
... |. +.+++++..|+..+ ++..+-..+...+++-...+ +.--.+++|. .-+.+
T Consensus 106 aSl~~gs~Nf~~~v~~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl~~~-p~~~~~vlGv~~g~~~~~~ 184 (275)
T 3no5_A 106 ASLATGSVNFPTRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVG-PLHIQFVMGIKNAMPVDRE 184 (275)
T ss_dssp EEEECSCEECSSSEECCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHTSSCS-SCEEEEEECCTTSCCCCHH
T ss_pred EEecCcccccccccccCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCCCCCC-CeeEEEEeCCCCCCCCCHH
Confidence 442 21 22445566655322 22233333333333311111 2345566665 33666
Q ss_pred HHHHHHHHHHHcC
Q 017200 291 QVVSTMEKVRAAG 303 (375)
Q Consensus 291 e~~etl~~Lrelg 303 (375)
++...++.++.++
T Consensus 185 ~l~~~~~~l~~~~ 197 (275)
T 3no5_A 185 VLEFYVQTLKRLS 197 (275)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCC
Confidence 7666666665444
No 33
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=91.81 E-value=3.9 Score=38.40 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=87.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc--Ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (375)
.+.+++++.|++..+.|.+.|-|-++... +...+.+..+|+.|++.. ++.|.+=+ + +.+.++.-.++ |.+
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~---~eE~~rv~~vi~~l~~~~-~~pisIDT--~--~~~v~~aal~a~~Ga~ 102 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTA---DDPVRVMEWLVKTIQEVV-DLPCCLDS--T--NPDAIEAGLKVHRGHA 102 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCS---SCHHHHHHHHHHHHHHHC-CCCEEEEC--S--CHHHHHHHHHHCCSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc---hhHHHHHHHHHHHHHHhC-CCeEEEeC--C--CHHHHHHHHHhCCCCC
Confidence 57899999999999999999998776521 123677888999998764 34443322 2 67888888888 998
Q ss_pred ccc-ccccch--HHHHHH----------hcC--C--CCCHHHHHH----HHHHHHHhCCCCce---EEEeEEEec-CCCH
Q 017200 235 VFA-HNIETV--EELQSA----------VRD--H--RANFKQSLD----VLMMAKDYVPAGTL---TKTSIMLGC-GETP 289 (375)
Q Consensus 235 v~~-hnlEtv--~rl~~~----------mr~--r--~~s~~~~l~----vl~~ak~~~p~Gl~---tkt~imvGl-GET~ 289 (375)
.++ .+.+.. +++.+- |+. + ..+.++.++ .++.+.+ .|+. +--+-.+|+ |-+.
T Consensus 103 iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~---~Gi~~~~IilDPg~gfigk~~ 179 (271)
T 2yci_X 103 MINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADA---HGIPMTELYIDPLILPVNVAQ 179 (271)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHH---TTCCGGGEEEECCCCCTTTST
T ss_pred EEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHH---CCCCcccEEEecCCCccccCH
Confidence 886 343322 344432 221 1 234444444 4445555 4654 566667788 8888
Q ss_pred HHHHHHHHHHHHcC
Q 017200 290 DQVVSTMEKVRAAG 303 (375)
Q Consensus 290 ee~~etl~~Lrelg 303 (375)
++-+++|+.++.+.
T Consensus 180 ~~~~~~l~~l~~~~ 193 (271)
T 2yci_X 180 EHAVEVLETIRQIK 193 (271)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 87766666666553
No 34
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=91.28 E-value=1.2 Score=39.90 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=53.1
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
..+++.+.++.+.+.|++.++++..+... . +.....++++.|++.. ++.+-+ .....+.+.++.+.++|+|.+.
T Consensus 31 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~~-~--~~~~~~~~i~~i~~~~-~ipvi~--~g~i~~~~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 31 EVGDPVEMAVRYEEEGADEIAILDITAAP-E--GRATFIDSVKRVAEAV-SIPVLV--GGGVRSLEDATTLFRAGADKVS 104 (253)
T ss_dssp EEECHHHHHHHHHHTTCSCEEEEECCCCT-T--THHHHHHHHHHHHHHC-SSCEEE--ESSCCSHHHHHHHHHHTCSEEE
T ss_pred ecccHHHHHHHHHHcCCCEEEEEeCCccc-c--CCcccHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCCEEE
Confidence 45789999999999999999998654322 1 2334577888888765 333322 2222367888999999999887
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 105 i~ 106 (253)
T 1h5y_A 105 VN 106 (253)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 35
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=90.89 E-value=3.4 Score=39.18 Aligned_cols=141 Identities=17% Similarity=0.258 Sum_probs=87.5
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCC--ChHHHHHHHHcCc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--NNGCVREVAKSGL 233 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g--~~e~l~~L~~aGl 233 (375)
|++++|+.+.|.+..+.|..-|+|=.=|.+.-+....+.|.+++..|++..|++.|.+.++.-.. ..+.+..+ +..+
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~P 108 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKP 108 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCC
Confidence 68999999999999999998777765542111222378899999999998899999987753221 23445555 5667
Q ss_pred cccccc-----c---------cchHHHHHHhcCCC-------CCHHHHHHHHHHHHHhCCCCce----EEEeEEEec---
Q 017200 234 NVFAHN-----I---------ETVEELQSAVRDHR-------ANFKQSLDVLMMAKDYVPAGTL----TKTSIMLGC--- 285 (375)
Q Consensus 234 dv~~hn-----l---------Etv~rl~~~mr~r~-------~s~~~~l~vl~~ak~~~p~Gl~----tkt~imvGl--- 285 (375)
|....+ . +.+++++..|+..+ ++......+...+++ |+. .-..+++|.
T Consensus 109 e~asl~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~----Gl~p~~p~~~~~VlGv~~g 184 (282)
T 2y7e_A 109 EMATLNAGTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKK----GIITQNPLHIQFVLGVPGG 184 (282)
T ss_dssp SEEEEECCCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHT----TSCCCSSCEEEEEECCTTS
T ss_pred CEEEecccccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHc----CCCCCCCeEEEEEEecCCC
Confidence 765222 2 22456666666332 333443333333333 443 445555554
Q ss_pred -CCCHHHHHHHHHHHHH
Q 017200 286 -GETPDQVVSTMEKVRA 301 (375)
Q Consensus 286 -GET~ee~~etl~~Lre 301 (375)
.-+.+++...+..|-+
T Consensus 185 ~~~~~~~L~~~~~~lp~ 201 (282)
T 2y7e_A 185 MSGKPKNLMYMMEHLKE 201 (282)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhccc
Confidence 4567777777766654
No 36
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=90.50 E-value=3.8 Score=39.07 Aligned_cols=138 Identities=13% Similarity=0.105 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCCCC----cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~----d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+++++++.|+++.+.|.+.|-|=|. .|+... +.-.+.+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT--~--~~~Va~aAl~ 121 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDT--R--KPEVAEEALK 121 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEEC--S--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEEC--C--CHHHHHHHHH
Confidence 368899999999999999999998773 344311 11256677888888754 44443322 2 4566666666
Q ss_pred cCcccccc-cccchHHHHHH----------hcCC---CCC--------------HHHHHHHHHHHHHhCCCCce-EEEeE
Q 017200 231 SGLNVFAH-NIETVEELQSA----------VRDH---RAN--------------FKQSLDVLMMAKDYVPAGTL-TKTSI 281 (375)
Q Consensus 231 aGldv~~h-nlEtv~rl~~~----------mr~r---~~s--------------~~~~l~vl~~ak~~~p~Gl~-tkt~i 281 (375)
+|.+.++- +-+..+++++- |+.+ ..+ .+...+.++.+.+ .|+. +--+-
T Consensus 122 aGa~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~---~Gi~~IilDP 198 (294)
T 2dqw_A 122 LGAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALS---AGVPQVVLDP 198 (294)
T ss_dssp HTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHH---TTCSCEEEEC
T ss_pred hCCCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHH---CCCCcEEEcC
Confidence 67766543 11112233322 1111 011 2233445566665 4653 12222
Q ss_pred EEecCCCHHHHHHHHHHHHHc
Q 017200 282 MLGCGETPDQVVSTMEKVRAA 302 (375)
Q Consensus 282 mvGlGET~ee~~etl~~Lrel 302 (375)
-+|||.|.++-+++|+.++++
T Consensus 199 G~Gf~kt~~~n~~ll~~l~~~ 219 (294)
T 2dqw_A 199 GFGFGKLLEHNLALLRRLDEI 219 (294)
T ss_dssp CTTSSCCHHHHHHHHHTHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHH
Confidence 237899999888888777664
No 37
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=90.43 E-value=6.9 Score=35.55 Aligned_cols=112 Identities=22% Similarity=0.283 Sum_probs=78.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.++.++++.+.|++-|-++- +. ++ -.+.++.+++.+|++.+.+=+ -+ +.+.++...++|.|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~~-----~~~~i~~l~~~~~~l~vgaGt-vl--~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITF--RS--EA-----AADAIRLLRANRPDFLIAAGT-VL--TAEQVVLAKSSGADFV 93 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TS--TT-----HHHHHHHHHHHCTTCEEEEES-CC--SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--cC--ch-----HHHHHHHHHHhCcCcEEeeCc-Ee--eHHHHHHHHHCCCCEE
Confidence 5788999999999999999988882 21 11 256888898889887776543 22 5789999999999977
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
-- +..+ .++++.+++. |.. +|.| -.|.+|+.+. .+.|.|++.+|
T Consensus 94 ~~--------------p~~d----~~v~~~ar~~---g~~----~i~G-v~t~~e~~~A----~~~Gad~vk~F 137 (224)
T 1vhc_A 94 VT--------------PGLN----PKIVKLCQDL---NFP----ITPG-VNNPMAIEIA----LEMGISAVKFF 137 (224)
T ss_dssp EC--------------SSCC----HHHHHHHHHT---TCC----EECE-ECSHHHHHHH----HHTTCCEEEET
T ss_pred EE--------------CCCC----HHHHHHHHHh---CCC----EEec-cCCHHHHHHH----HHCCCCEEEEe
Confidence 22 1211 4566777773 332 3446 3588887553 47899999985
No 38
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=90.38 E-value=1.9 Score=40.96 Aligned_cols=159 Identities=12% Similarity=0.138 Sum_probs=93.5
Q ss_pred ccCCCCcCCCCCCC--CCC-CCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEee
Q 017200 138 TCTRGCRFCNVKTS--RAP-PPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEAL 214 (375)
Q Consensus 138 ~C~~~C~FC~v~~~--r~~-~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l 214 (375)
.|.--|.-+.-... ..| .|++++|+.+.|.+..+.|..-|+|=-=|.+.-+....+.|.+++..|++..|++.|.+.
T Consensus 9 ~viIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~T 88 (284)
T 3chv_A 9 PCIICVAITGSVPTKADNPAVPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFS 88 (284)
T ss_dssp CBCEEEECCCSSCCTTTCTTCCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred CeEEEEecCCCcCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeC
Confidence 33344544443222 234 368999999999999999998887765443222222378899999999998899999887
Q ss_pred cCCCC-CChHHHHHHHHcCcccccccc--------------cchHHHHHHhcCCC-------CCHHHHHHHHHHHHHhCC
Q 017200 215 VPDFR-GNNGCVREVAKSGLNVFAHNI--------------ETVEELQSAVRDHR-------ANFKQSLDVLMMAKDYVP 272 (375)
Q Consensus 215 ~pd~~-g~~e~l~~L~~aGldv~~hnl--------------Etv~rl~~~mr~r~-------~s~~~~l~vl~~ak~~~p 272 (375)
++.-. ...+.+..+ +..+|....|. +.+++++..|+.++ ++..+-..+ ..+.+
T Consensus 89 Tgg~~~~~eeR~~~~-~~~Pe~aSl~~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~-~~l~~--- 163 (284)
T 3chv_A 89 TGGRSGAGQARGGML-PLKPDMASLSVGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRA-IDMHG--- 163 (284)
T ss_dssp CCTTTCCGGGGGTTG-GGCCSEEEECCSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHHH---
T ss_pred CCCCCCCHHHHHHhh-hcCCCEEEecCcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHH-HHHHH---
Confidence 74321 123444444 55667654432 12456666655322 333343333 33333
Q ss_pred CCc---eEEEeEEEec----CCCHHHHHHHHHHHHH
Q 017200 273 AGT---LTKTSIMLGC----GETPDQVVSTMEKVRA 301 (375)
Q Consensus 273 ~Gl---~tkt~imvGl----GET~ee~~etl~~Lre 301 (375)
.|+ ..-..+++|. +-+.+++...+..+-+
T Consensus 164 ~Gll~~p~~~~~vlGv~~g~~~~~~~L~~~~~~~p~ 199 (284)
T 3chv_A 164 RGLLYGKLYVQFVMGVKNAMPADREVFDFYVRMMRT 199 (284)
T ss_dssp TTCSCSSCEEEEEECCTTSCCCCHHHHHHHHHHHHH
T ss_pred cCCCCCCceEEEEEecCCCCCCCHHHHHHHHHhccC
Confidence 244 3344455554 5567777777766654
No 39
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.34 E-value=1.1 Score=43.33 Aligned_cols=140 Identities=10% Similarity=0.075 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCC--CCc-ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDD--LAD-QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~d--l~d-~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (375)
..+.+++++.|+++.+.|.+-|-|=|. .|+. ... .-.+.+..+|+.|++..|++.|.+=+ + +.+.++.-.++
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT--~--~~~VaeaAl~a 136 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT--W--RAQVAKAACAA 136 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC--S--CHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC--C--CHHHHHHHHHh
Confidence 368899999999999999999988764 2443 111 11345667788888877677665432 2 56777777777
Q ss_pred Ccccccc-cccchHHHHHH----------hcCCC---------CCH------------HHHHHHHHHHHHhCCCCce---
Q 017200 232 GLNVFAH-NIETVEELQSA----------VRDHR---------ANF------------KQSLDVLMMAKDYVPAGTL--- 276 (375)
Q Consensus 232 Gldv~~h-nlEtv~rl~~~----------mr~r~---------~s~------------~~~l~vl~~ak~~~p~Gl~--- 276 (375)
|.+.++- +-+..+++++- |+.++ ..| +...+.++.+.+ .|+.
T Consensus 137 Ga~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~---aGI~~~~ 213 (318)
T 2vp8_A 137 GADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVA---AGVAREK 213 (318)
T ss_dssp TCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHH---TTCCGGG
T ss_pred CCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHH---cCCChhh
Confidence 8776642 11112233221 22111 112 223344566666 4653
Q ss_pred EEEeEEEecCCCHHHHHHHHHHHHHc
Q 017200 277 TKTSIMLGCGETPDQVVSTMEKVRAA 302 (375)
Q Consensus 277 tkt~imvGlGET~ee~~etl~~Lrel 302 (375)
+--+--+|||.|.++-+++|+.++++
T Consensus 214 IilDPG~GF~Kt~~~nl~ll~~l~~l 239 (318)
T 2vp8_A 214 VLIDPAHDFGKNTFHGLLLLRHVADL 239 (318)
T ss_dssp EEEETTTTCCTTSHHHHHHHHTHHHH
T ss_pred EEEcCCCCcccCHHHHHHHHHHHHHH
Confidence 44444457888888877777766654
No 40
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=90.23 E-value=8.2 Score=34.73 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=78.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.++.++++.+.|++-|.|+- +. ++ -.+.++.+++.+|++.+..=+ +. +.+.++...++|.|.+
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~~-----~~~~i~~l~~~~~~~~vgagt--vi-~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTL--RT--EC-----AVDAIRAIAKEVPEAIVGAGT--VL-NPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEES--CS--TT-----HHHHHHHHHHHCTTSEEEEES--CC-SHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--CC--hh-----HHHHHHHHHHHCcCCEEeeCE--EE-EHHHHHHHHHcCCCEE
Confidence 4788999999999999999998882 21 11 246888888888887766533 22 6789999999999976
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.-. ..+ .++++.+++. |+ .+|.| -.|.+|+.+. .+.|.|++.+|
T Consensus 93 ~~p--------------~~d----~~v~~~~~~~---g~----~~i~G-~~t~~e~~~A----~~~Gad~v~~F 136 (214)
T 1wbh_A 93 ISP--------------GLT----EPLLKAATEG---TI----PLIPG-ISTVSELMLG----MDYGLKEFKFF 136 (214)
T ss_dssp EES--------------SCC----HHHHHHHHHS---SS----CEEEE-ESSHHHHHHH----HHTTCCEEEET
T ss_pred EcC--------------CCC----HHHHHHHHHh---CC----CEEEe-cCCHHHHHHH----HHCCCCEEEEe
Confidence 321 111 3566666663 43 34556 3578887554 37899999985
No 41
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=89.67 E-value=11 Score=34.32 Aligned_cols=112 Identities=19% Similarity=0.287 Sum_probs=77.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.++.++++.+.|++-|-|+- +. + .-.+.++.+++.+|++.+.+=+. + +.+.++...++|.|.+
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~-----~~~~~i~~l~~~~~~~~igagtv-l--~~d~~~~A~~aGAd~v 102 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTL--RS--Q-----HGLKAIQVLREQRPELCVGAGTV-L--DRSMFAAVEAAGAQFV 102 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEES--SS--T-----HHHHHHHHHHHHCTTSEEEEECC-C--SHHHHHHHHHHTCSSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEec--CC--c-----cHHHHHHHHHHhCcccEEeeCeE-e--eHHHHHHHHHCCCCEE
Confidence 3678999999999999999998882 21 1 13467888888889888765443 3 6789999999999976
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.-. ..+ .++++.+++ .|+ .+|.| -.|.+|+.+.+ +.|.|++.+|
T Consensus 103 ~~p--------------~~d----~~v~~~~~~---~g~----~~i~G-~~t~~e~~~A~----~~Gad~vk~F 146 (225)
T 1mxs_A 103 VTP--------------GIT----EDILEAGVD---SEI----PLLPG-ISTPSEIMMGY----ALGYRRFKLF 146 (225)
T ss_dssp ECS--------------SCC----HHHHHHHHH---CSS----CEECE-ECSHHHHHHHH----TTTCCEEEET
T ss_pred EeC--------------CCC----HHHHHHHHH---hCC----CEEEe-eCCHHHHHHHH----HCCCCEEEEc
Confidence 321 111 356666666 233 34556 35777765543 7899998885
No 42
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.46 E-value=2 Score=40.43 Aligned_cols=165 Identities=10% Similarity=0.110 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhCCCcEEEeecC-C--CCCChHHHHHHHHcCcccccccccc---------hH-HHHHHhcCCCCCHHHH
Q 017200 194 HFAQTVRKLKELKPNMLIEALVP-D--FRGNNGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQS 260 (375)
Q Consensus 194 ~~~~lir~Ik~~~p~i~Ie~l~p-d--~~g~~e~l~~L~~aGldv~~hnlEt---------v~-rl~~~mr~r~~s~~~~ 260 (375)
++.+.++.+++......|-.++. | +....+.++.|.++|+|.+..++.. +. .-.+.+. .+.+.++.
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~-~G~~~~~~ 82 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLA-AGTTSSDC 82 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHH
Confidence 45667777776654455554442 2 2223667888889999988777422 22 1223344 57889999
Q ss_pred HHHHHHHHHhCCCCceEEEeEEEecCC-CH-H--HHHHHHHHHHHcCCcEEeeecCCCCCC----------CCCCccccC
Q 017200 261 LDVLMMAKDYVPAGTLTKTSIMLGCGE-TP-D--QVVSTMEKVRAAGVDVMTFGQYMRPSK----------RHMPVSEYI 326 (375)
Q Consensus 261 l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~-e--e~~etl~~Lrelgvd~v~i~qYl~P~~----------~~~~v~~~v 326 (375)
++.++.+++..+. ++ ..+| +. +. . -+...++.+.+.|+|.+.+ .-+.+.. .++...-.+
T Consensus 83 ~~~v~~ir~~~~~-~P--ivlm---~Y~npv~~~g~e~f~~~~~~aGvdgvii-~Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 83 FDIITKVRAQHPD-MP--IGLL---LYANLVFANGIDEFYTKAQAAGVDSVLI-ADVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp HHHHHHHHHHCTT-CC--EEEE---ECHHHHHHHCHHHHHHHHHHHTCCEEEE-TTSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred HHHHHHHHhcCCC-CC--EEEE---ecCcHHHHhhHHHHHHHHHHcCCCEEEe-CCCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 9999999985322 22 2222 22 11 0 1255677888889998877 3332210 123322233
Q ss_pred CHH-HHHHHHHHHHH-hhhhhhccch---hhhhhcchh-HHHHHHH
Q 017200 327 TPE-AFERYRALGME-MGFRYVASGP---MVRSSYKVV-GWCYYLI 366 (375)
Q Consensus 327 ~pe-~~~~l~~~a~~-~gf~~~~sgp---~vrssy~a~-~~~~~~~ 366 (375)
.|. ..++++.++.. -||.|+.|-. -.|+.+... ..+++.|
T Consensus 156 aP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~v 201 (267)
T 3vnd_A 156 PPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQL 201 (267)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHH
Confidence 342 24677777665 4799985432 255544332 3445444
No 43
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.93 E-value=1.6 Score=39.40 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=77.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.|.....+.++.+.+.|++.+.|---|....+.. ..-.+.++.|++..+ .+.+.+++-| ..+.++.+.++|+|.
T Consensus 16 ~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~--~~~~~~~~~lr~~~~~~~~v~lmv~d---~~~~i~~~~~agad~ 90 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNL--TIGAPVIQSLRKHTKAYLDCHLMVTN---PSDYVEPLAKAGASG 90 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB--CBCHHHHHHHHTTCCSEEEEEEESSC---GGGGHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcch--hhCHHHHHHHHhhcCCcEEEEEEecC---HHHHHHHHHHcCCCE
Confidence 5778888999999999999887765554332221 111377888887653 2345556533 234688889999998
Q ss_pred ccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc--CCcEEeeecCC
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA--GVDVMTFGQYM 313 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel--gvd~v~i~qYl 313 (375)
+....|..+.. ..++++.+++ .|+.+ ++.+. -.|+.+. ++.+.+. ++|++.+....
T Consensus 91 v~vH~~~~~~~-------------~~~~~~~i~~---~g~~i--gv~~~-p~t~~e~---~~~~~~~~~~~d~vl~~sv~ 148 (228)
T 1h1y_A 91 FTFHIEVSRDN-------------WQELIQSIKA---KGMRP--GVSLR-PGTPVEE---VFPLVEAENPVELVLVMTVE 148 (228)
T ss_dssp EEEEGGGCTTT-------------HHHHHHHHHH---TTCEE--EEEEC-TTSCGGG---GHHHHHSSSCCSEEEEESSC
T ss_pred EEECCCCcccH-------------HHHHHHHHHH---cCCCE--EEEEe-CCCCHHH---HHHHHhcCCCCCEEEEEeec
Confidence 86554432211 0244555555 35432 23332 2344443 3344555 78988886543
Q ss_pred CCC
Q 017200 314 RPS 316 (375)
Q Consensus 314 ~P~ 316 (375)
|+
T Consensus 149 -pg 150 (228)
T 1h1y_A 149 -PG 150 (228)
T ss_dssp -TT
T ss_pred -CC
Confidence 54
No 44
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=87.95 E-value=2.8 Score=40.36 Aligned_cols=84 Identities=18% Similarity=0.163 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCC-CCCcccHHHHHHHHHHHHHhCCCcEEEeecCCC--C--CChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRD-DLADQGSGHFAQTVRKLKELKPNMLIEALVPDF--R--GNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~-dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~--~--g~~e~l~~L~~ 230 (375)
|++++|+.+.|.+..+.|..-|+|=.=|.+ .-+....+.|.+++..|++. +++.|...++.- . ...+.++.+.+
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 689999999999999999987777654422 22222377899999999987 688888777521 1 23455666666
Q ss_pred cCcccccccc
Q 017200 231 SGLNVFAHNI 240 (375)
Q Consensus 231 aGldv~~hnl 240 (375)
..+|....|.
T Consensus 107 ~~Pe~aSln~ 116 (314)
T 3lot_A 107 LKPEIATFNM 116 (314)
T ss_dssp HCCSEEEEEC
T ss_pred cCCceeeecC
Confidence 6777665543
No 45
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=87.66 E-value=3.3 Score=44.27 Aligned_cols=138 Identities=16% Similarity=0.093 Sum_probs=88.2
Q ss_pred CCcchHHHHHHHHHhcC--CcEEEEEeeeCCC--CCcccHHHHHHHHHHHHHhCCCcEEEeecCC--CCC--------Ch
Q 017200 157 PDPDEPTNVAEAIASWG--LDYVVITSVDRDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPD--FRG--------NN 222 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G--~~eIvLTsgdr~d--l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd--~~g--------~~ 222 (375)
++.++.+++|+++.+.| +..|-+.||..-| ++-.+.. =.+.++.|++..|++.+..+.-. ..| ..
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~-p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~ 200 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYEC-PWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVF 200 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCC-HHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCC-HHHHHHHHHHHcccchHHHHhcccccccccccCCcchH
Confidence 78999999999999985 6669888664311 0000001 13567777777788877755421 111 24
Q ss_pred HHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe---c-C--C--CHHHHHH
Q 017200 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG---C-G--E--TPDQVVS 294 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvG---l-G--E--T~ee~~e 294 (375)
+.++...++|+|++....-.. ..+.....++.+++ .|..+...+.+. . + - +.+.+++
T Consensus 201 ~~i~~a~~~Gvd~irIf~s~n------------~l~~l~~~i~~ak~---~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~ 265 (718)
T 3bg3_A 201 KFCEVAKENGMDVFRVFDSLN------------YLPNMLLGMEAAGS---AGGVVEAAISYTGDVADPSRTKYSLQYYMG 265 (718)
T ss_dssp HHHHHHHHHTCCEEEEECSSC------------CHHHHHHHHHHHHT---TTSEEEEEEECCSCTTCTTCCTTCHHHHHH
T ss_pred HHHHHHHhcCcCEEEEEecHH------------HHHHHHHHHHHHHH---cCCeEEEEEEeeccccCCCCCCCCHHHHHH
Confidence 667888999999876542211 23444566677777 466666656555 1 1 1 6677888
Q ss_pred HHHHHHHcCCcEEeee
Q 017200 295 TMEKVRAAGVDVMTFG 310 (375)
Q Consensus 295 tl~~Lrelgvd~v~i~ 310 (375)
.++.+.+.|++.|.|.
T Consensus 266 ~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 266 LAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEc
Confidence 8888888888888773
No 46
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=86.92 E-value=1.8 Score=39.11 Aligned_cols=76 Identities=9% Similarity=0.125 Sum_probs=51.2
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.++.+.++.+.+.|++.+++..-+....+ ...+ +.++.|++.. ++.+. ......+++.++.+.++|+|.+..+
T Consensus 32 ~d~~~~a~~~~~~Gad~i~v~~~d~~~~~---~~~~-~~i~~i~~~~-~ipv~--v~ggI~~~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 32 GSPLEAALAWQRSGAEWLHLVDLDAAFGT---GDNR-ALIAEVAQAM-DIKVE--LSGGIRDDDTLAAALATGCTRVNLG 104 (244)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEHHHHHTS---CCCH-HHHHHHHHHC-SSEEE--EESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEecCchhhcC---CChH-HHHHHHHHhc-CCcEE--EECCcCCHHHHHHHHHcCCCEEEEC
Confidence 37888899999999999998754321111 1225 8888998765 34332 2222236788999999999988765
Q ss_pred ccc
Q 017200 240 IET 242 (375)
Q Consensus 240 lEt 242 (375)
.+.
T Consensus 105 ~~~ 107 (244)
T 1vzw_A 105 TAA 107 (244)
T ss_dssp HHH
T ss_pred chH
Confidence 443
No 47
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.62 E-value=1.6 Score=41.15 Aligned_cols=150 Identities=11% Similarity=0.196 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhCCCcEEEeec---CCCCCChHHHHHHHHcCcccccccccc---------hH-HHHHHhcCCCCCHHHH
Q 017200 194 HFAQTVRKLKELKPNMLIEALV---PDFRGNNGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQS 260 (375)
Q Consensus 194 ~~~~lir~Ik~~~p~i~Ie~l~---pd~~g~~e~l~~L~~aGldv~~hnlEt---------v~-rl~~~mr~r~~s~~~~ 260 (375)
++.++++.+++......|-.++ |++....+.++.|.++|+|.+..++.. .. .-.+.+. .+.+.++.
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~-~G~~~~~~ 84 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALA-AKTTPDIC 84 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHH-TTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHH
Confidence 4566777777655445555444 233224667788888899988777432 11 2233455 57889999
Q ss_pred HHHHHHHHHhCCCCceEEEeEEEecCCCHHH--HHHHHHHHHHcCCcEEeeecCCCCCC----------CCCCccccCCH
Q 017200 261 LDVLMMAKDYVPAGTLTKTSIMLGCGETPDQ--VVSTMEKVRAAGVDVMTFGQYMRPSK----------RHMPVSEYITP 328 (375)
Q Consensus 261 l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee--~~etl~~Lrelgvd~v~i~qYl~P~~----------~~~~v~~~v~p 328 (375)
++.++.+++..+. +++ -+| |.-..... +...++.+.+.|+|.+-+. =+.+.. .++.+.-.+.|
T Consensus 85 ~~~v~~~r~~~~~-~Pi--vlm-~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-Dlp~ee~~~~~~~~~~~gl~~I~lvap 159 (271)
T 3nav_A 85 FELIAQIRARNPE-TPI--GLL-MYANLVYARGIDDFYQRCQKAGVDSVLIA-DVPTNESQPFVAAAEKFGIQPIFIAPP 159 (271)
T ss_dssp HHHHHHHHHHCTT-SCE--EEE-ECHHHHHHTCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHhcCCC-CCE--EEE-ecCcHHHHHhHHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHHcCCeEEEEECC
Confidence 9999999875322 221 122 22111111 2556777888888887662 222200 12222222333
Q ss_pred H-HHHHHHHHHHH-hhhhhhccc
Q 017200 329 E-AFERYRALGME-MGFRYVASG 349 (375)
Q Consensus 329 e-~~~~l~~~a~~-~gf~~~~sg 349 (375)
. ..++++.++.. -||.|+.|-
T Consensus 160 ~t~~eri~~i~~~~~gfiY~vs~ 182 (271)
T 3nav_A 160 TASDETLRAVAQLGKGYTYLLSR 182 (271)
T ss_dssp TCCHHHHHHHHHHCCSCEEECCC
T ss_pred CCCHHHHHHHHHHCCCeEEEEec
Confidence 2 23566666554 589998554
No 48
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=86.39 E-value=8.5 Score=39.08 Aligned_cols=131 Identities=17% Similarity=0.258 Sum_probs=83.8
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++..+.++++.+.|++.|+|.+.+.. ...+.+.|+.|++.+|++.|-+ +.. .+.+..+.+.++|+|.+-.+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~i~~ir~~~p~~~Vi~--g~v-~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG--GNV-ATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCCEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred cchHHHHHHHHhccCceEEecccccc------chHHHHHHHHHHHHCCCceEEE--ccc-CcHHHHHHHHHhCCCEEEEC
Confidence 45577788899999999999876531 3567899999999988765433 111 16788999999999987543
Q ss_pred -----ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 240 -----IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 240 -----lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
.-+. +...-+. ...+....++.+.+++. +++ +|..- --|.+|+...+. +|.+.|-+|..+
T Consensus 301 ~g~Gs~~~t-r~~~g~g--~p~~~~i~~v~~~~~~~---~iP----VIa~GGI~~~~di~kala----~GAd~V~iGs~f 366 (496)
T 4fxs_A 301 IGPGSICTT-RIVTGVG--VPQITAIADAAGVANEY---GIP----VIADGGIRFSGDISKAIA----AGASCVMVGSMF 366 (496)
T ss_dssp SSCCTTBCH-HHHHCCC--CCHHHHHHHHHHHHGGG---TCC----EEEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCCcCccc-ccccCCC--ccHHHHHHHHHHHhccC---CCe----EEEeCCCCCHHHHHHHHH----cCCCeEEecHHH
Confidence 1111 2211121 23444445555555542 333 33322 258888887763 699999898665
No 49
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=86.35 E-value=5.2 Score=37.09 Aligned_cols=153 Identities=14% Similarity=0.150 Sum_probs=90.3
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHHhCCCcEEE--eecCCCCCChHHHHHHHHcC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d--~G~~~~~~lir~Ik~~~p~i~Ie--~l~pd~~g~~e~l~~L~~aG 232 (375)
.|...+.+.++.+.+.|++.+++==.|..-.|. .| ..++++|++..|+..+. +.+-+ ....++.+.++|
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G----~~~v~~lr~~~p~~~ldvHLmv~~---p~~~i~~~~~aG 109 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFG----PMVLKALRDYGITAGMDVHLMVKP---VDALIESFAKAG 109 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC----HHHHHHHHHHTCCSCEEEEEECSS---CHHHHHHHHHHT
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcC----HHHHHHHHHhCCCCeEEEEEeeCC---HHHHHHHHHHcC
Confidence 688889999999999999988776555433332 23 46788888877655443 33322 245789999999
Q ss_pred cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 233 ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+|.+....|+.+. ..++++.+|+ .|+ +.++.+- -.|+.+.++-+. + ++|.|.+. -
T Consensus 110 Ad~itvH~Ea~~~--------------~~~~i~~ir~---~G~--k~Gvaln-p~Tp~e~l~~~l---~-~vD~VlvM-s 164 (246)
T 3inp_A 110 ATSIVFHPEASEH--------------IDRSLQLIKS---FGI--QAGLALN-PATGIDCLKYVE---S-NIDRVLIM-S 164 (246)
T ss_dssp CSEEEECGGGCSC--------------HHHHHHHHHT---TTS--EEEEEEC-TTCCSGGGTTTG---G-GCSEEEEE-C
T ss_pred CCEEEEccccchh--------------HHHHHHHHHH---cCC--eEEEEec-CCCCHHHHHHHH---h-cCCEEEEe-e
Confidence 9999887775431 1345566666 464 5555443 334444433221 1 46776553 1
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 313 MRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 313 l~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
..|+..+.+..+ -..++.++|+++..+.|
T Consensus 165 V~PGfgGQ~fi~-~~l~KI~~lr~~~~~~~ 193 (246)
T 3inp_A 165 VNPGFGGQKFIP-AMLDKAKEISKWISSTD 193 (246)
T ss_dssp SCTTC--CCCCT-THHHHHHHHHHHHHHHT
T ss_pred ecCCCCCcccch-HHHHHHHHHHHHHHhcC
Confidence 246443322221 12356677776665555
No 50
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=86.02 E-value=12 Score=35.88 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=80.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEee-eCCCCC--------cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA--------DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~--------d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (375)
.+++++++.|+++.+.|.+.|-|=|. .+|.-. +.-.+.+..+|+.|++.. ++.|.+=+ + +.+.++.
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISIDT--~--~~~Va~a 120 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISVDT--S--RPRVMRE 120 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEEEC--S--CHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEEeC--C--CHHHHHH
Confidence 57899999999999999999887653 454322 011334667777887653 45554322 2 5778888
Q ss_pred HHHcCcccccc-cccchHHHHHH----------hcCCC--C------C-------HHHHHHHHHHHHHhCCCCce---EE
Q 017200 228 VAKSGLNVFAH-NIETVEELQSA----------VRDHR--A------N-------FKQSLDVLMMAKDYVPAGTL---TK 278 (375)
Q Consensus 228 L~~aGldv~~h-nlEtv~rl~~~----------mr~r~--~------s-------~~~~l~vl~~ak~~~p~Gl~---tk 278 (375)
-.++|.+.++- +-+..+++++- |..++ . . .+...+.++.+.+ .|+. +-
T Consensus 121 Al~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~---~GI~~~~Ii 197 (314)
T 3tr9_A 121 AVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKK---AGISEDRII 197 (314)
T ss_dssp HHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHH---TTCCGGGEE
T ss_pred HHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHH---cCCCHhHEE
Confidence 88888887643 11122233332 11111 1 1 2233345556666 4653 33
Q ss_pred EeEEEe---cCCCHHHHHHHHHHHHHc
Q 017200 279 TSIMLG---CGETPDQVVSTMEKVRAA 302 (375)
Q Consensus 279 t~imvG---lGET~ee~~etl~~Lrel 302 (375)
-+--+| ||.|.++=+++|+.|+++
T Consensus 198 lDPG~G~~~F~Kt~~~n~~lL~~l~~l 224 (314)
T 3tr9_A 198 IDPGFGQGNYGKNVSENFYLLNKLPEF 224 (314)
T ss_dssp EECCCCSGGGCCCHHHHHHHHHTTHHH
T ss_pred EeCCCCchhhcCCHHHHHHHHHHHHHH
Confidence 333358 889998777777665544
No 51
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=85.95 E-value=6.7 Score=35.50 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=31.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK 203 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik 203 (375)
..++++.++.++++.+.|++.|++|-=...+..+...+.+.+.++.++
T Consensus 20 ~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~ 67 (247)
T 2wje_A 20 PKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVR 67 (247)
T ss_dssp CSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999964332222222333444444443
No 52
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=85.45 E-value=2.1 Score=38.52 Aligned_cols=75 Identities=7% Similarity=0.073 Sum_probs=51.5
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.++.+.++++.+.|++.+++..-+....+ ...+ +.+++|++.. ++.+. ......+++.++.+.++|+|.+..+
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~~~d~~~~~---~~~~-~~i~~i~~~~-~ipv~--v~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 31 GSAVDAALGWQRDGAEWIHLVDLDAAFGR---GSNH-ELLAEVVGKL-DVQVE--LSGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEEHHHHTTS---CCCH-HHHHHHHHHC-SSEEE--EESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCcccccC---CChH-HHHHHHHHhc-CCcEE--EECCCCCHHHHHHHHHcCCCEEEEC
Confidence 47889999999999999998754322111 1224 8889998865 34332 2233336788999999999988765
Q ss_pred cc
Q 017200 240 IE 241 (375)
Q Consensus 240 lE 241 (375)
.+
T Consensus 104 ~~ 105 (244)
T 2y88_A 104 TA 105 (244)
T ss_dssp HH
T ss_pred ch
Confidence 44
No 53
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=85.15 E-value=17 Score=36.78 Aligned_cols=134 Identities=16% Similarity=0.228 Sum_probs=82.9
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++..+.++++.+.|++.|+|.+.... ...+.+.|+.+++.+|++.|-+ ++. .+.+..+.+.++|+|.+..+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~v~~i~~~~p~~~Vi~--g~v-~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH------SKGVIERVRWVKQTFPDVQVIG--GNI-ATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS------BHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCCc------chhHHHHHHHHHHHCCCceEEE--eee-CcHHHHHHHHHcCCCEEEEC
Confidence 46678888999999999999865432 3467899999999988765533 211 16788999999999988643
Q ss_pred cc-chHHHHHHhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 240 IE-TVEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 240 lE-tv~rl~~~mr~r-~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
.. ...-..+.+..- ...+.-..++.+.+++ .+++ +|..-| -|.+|+.+.+. +|.+.|-+|..+
T Consensus 299 ~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~---~~iP----VIa~GGI~~~~di~kal~----~GAd~V~vGs~~ 364 (490)
T 4avf_A 299 IGPGSICTTRIVAGVGVPQISAIANVAAALEG---TGVP----LIADGGIRFSGDLAKAMV----AGAYCVMMGSMF 364 (490)
T ss_dssp SSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT---TTCC----EEEESCCCSHHHHHHHHH----HTCSEEEECTTT
T ss_pred CCCCcCCCccccCCCCccHHHHHHHHHHHhcc---CCCc----EEEeCCCCCHHHHHHHHH----cCCCeeeecHHH
Confidence 21 111111112111 2233333444444433 2333 333222 48888888764 599999998765
No 54
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=84.99 E-value=13 Score=34.37 Aligned_cols=119 Identities=16% Similarity=0.136 Sum_probs=73.7
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.++.+.|++..+.|..-|.+. +.+.+..+. .+.++.|++.. ++ .++..||.-++..+....++|.|.+..+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvl--t~~~~f~G~----~~~l~~i~~~v-~l--Pvl~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVL--TEPHRFGGS----LLDLKRVREAV-DL--PLLRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEE--CCCSSSCCC----HHHHHHHHHHC-CS--CEEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEe--cchhhhccC----HHHHHHHHHhc-CC--CEEECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 788999999999999999773 222332222 23455565543 22 2356788778878999999999988664
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
....+ ++.-+.++.++++ |+.+- +-. .+++|.. ...+++.+++.+.+.
T Consensus 136 ~~~l~-------------~~l~~l~~~a~~l---Gl~~l----vev-~~~~E~~----~a~~~gad~IGvn~~ 183 (254)
T 1vc4_A 136 VALLG-------------ELTGAYLEEARRL---GLEAL----VEV-HTERELE----IALEAGAEVLGINNR 183 (254)
T ss_dssp HHHHG-------------GGHHHHHHHHHHH---TCEEE----EEE-CSHHHHH----HHHHHTCSEEEEESB
T ss_pred ccchH-------------HHHHHHHHHHHHC---CCeEE----EEE-CCHHHHH----HHHHcCCCEEEEccc
Confidence 32111 2223555666664 55443 222 3556543 445678899998754
No 55
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=84.92 E-value=20 Score=31.77 Aligned_cols=122 Identities=18% Similarity=0.230 Sum_probs=73.8
Q ss_pred CCcc--hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEE-EeecCCC------C-CChHHHH
Q 017200 157 PDPD--EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI-EALVPDF------R-GNNGCVR 226 (375)
Q Consensus 157 ld~e--Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~I-e~l~pd~------~-g~~e~l~ 226 (375)
..++ ++.+.++++.+.|+..+.+.+ .+.++.|++.. ++.+ .+...+| . ...+.++
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~~--------------~~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~ 95 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRANS--------------VRDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVD 95 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEES--------------HHHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHH
T ss_pred cCCccchHHHHHHHHHHCCCcEeecCC--------------HHHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHH
Confidence 3567 899999999999999887631 13467777654 2333 2222221 1 1457899
Q ss_pred HHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcE
Q 017200 227 EVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDV 306 (375)
Q Consensus 227 ~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~ 306 (375)
.+.++|.|.+..+.+... ++.+. ...++++.+++.+| |+. ++++. .|.++ +..+.+.|+|+
T Consensus 96 ~~~~~Gad~V~l~~~~~~------~~~~~---~~~~~i~~i~~~~~-~~~----v~~~~-~t~~e----a~~a~~~Gad~ 156 (234)
T 1yxy_A 96 QLAALNIAVIAMDCTKRD------RHDGL---DIASFIRQVKEKYP-NQL----LMADI-STFDE----GLVAHQAGIDF 156 (234)
T ss_dssp HHHTTTCSEEEEECCSSC------CTTCC---CHHHHHHHHHHHCT-TCE----EEEEC-SSHHH----HHHHHHTTCSE
T ss_pred HHHHcCCCEEEEcccccC------CCCCc---cHHHHHHHHHHhCC-CCe----EEEeC-CCHHH----HHHHHHcCCCE
Confidence 999999998865443211 10011 23567778887654 343 23333 46655 55667889999
Q ss_pred E--eeecC
Q 017200 307 M--TFGQY 312 (375)
Q Consensus 307 v--~i~qY 312 (375)
| +++.+
T Consensus 157 i~~~v~g~ 164 (234)
T 1yxy_A 157 VGTTLSGY 164 (234)
T ss_dssp EECTTTTS
T ss_pred Eeeecccc
Confidence 9 56544
No 56
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=84.91 E-value=2.1 Score=41.04 Aligned_cols=60 Identities=15% Similarity=0.138 Sum_probs=43.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCC-C---c--ccHHHHHHHHHHHHHhCCC-cEEEe-ecC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDL-A---D--QGSGHFAQTVRKLKELKPN-MLIEA-LVP 216 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl-~---d--~G~~~~~~lir~Ik~~~p~-i~Ie~-l~p 216 (375)
.+.+++...+..+.+.|++.|+...||.+.. . + +|+.+-.++|+.|++.+++ ..|.+ ..|
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yP 150 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYP 150 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 4678999999999999999999999985432 1 1 2366677888888876444 56654 445
No 57
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=84.48 E-value=3.3 Score=39.58 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=48.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCC---CCh-HHHHHH---
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFR---GNN-GCVREV--- 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~---g~~-e~l~~L--- 228 (375)
.+.+++...+..+.+.|++.|+...||.+...+++..+-.++|+.|++.. +..|.+ ..|+.. .+. ..++.|
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~-~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVA-DFDISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHC-CCEEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcC-CCeEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 35788999999999999999999999865443344555678888888763 455554 334311 121 233333
Q ss_pred HHcCcccc
Q 017200 229 AKSGLNVF 236 (375)
Q Consensus 229 ~~aGldv~ 236 (375)
.++|.|.+
T Consensus 173 vdAGAdf~ 180 (304)
T 3fst_A 173 VDAGANRA 180 (304)
T ss_dssp HHHTCCEE
T ss_pred HHcCCCEE
Confidence 36788753
No 58
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=84.22 E-value=1.8 Score=44.79 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=85.6
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++-.+.++++.+.|++.|||-+-+. -..+..++++.||+.+|++.|-+ ++. .+.+..+.|.++|+|.+-.+
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahG------hs~~v~~~i~~ik~~~p~~~via--GNV-aT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQG------NSVYQIEFIKWIKQTYPKIDVIA--GNV-VTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCC------CSHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEecccc------ccHHHHHHHHHHHhhCCcceEEe--ccc-cCHHHHHHHHHcCCCEEeec
Confidence 3567789999999999999865432 25778999999999999876633 222 16789999999999988655
Q ss_pred cc-chHHHHHHhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 240 IE-TVEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 240 lE-tv~rl~~~mr~r-~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+= .+--..+.+..- .....-.+++.+.+++. |+++-++- |+ -+.-|+...| ..|-|.|-+|-+|
T Consensus 351 iGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~---~vpvIADG--GI-~~sGDi~KAl----aaGAd~VMlGsll 416 (556)
T 4af0_A 351 MGSGSICITQEVMAVGRPQGTAVYAVAEFASRF---GIPCIADG--GI-GNIGHIAKAL----ALGASAVMMGGLL 416 (556)
T ss_dssp SSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGG---TCCEEEES--CC-CSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCcccccccccCCCCcHHHHHHHHHHHHHHc---CCCEEecC--Cc-CcchHHHHHh----hcCCCEEEEchhh
Confidence 42 111111112210 12234445666666664 45443332 22 4666666655 4677888787666
No 59
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=83.99 E-value=17 Score=37.00 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=83.7
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.++..+.++++.+.|++.|+|.+.+. +...+.++|+.|++.+|++.|-+ .+. .+.+..+.+.++|+|.+-.
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g------~~~~v~~~i~~i~~~~~~~~vi~--g~v-~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHG------HSQGVIDKVKEVRAKYPSLNIIA--GNV-ATAEATKALIEAGANVVKV 324 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHHTCSEEEE
T ss_pred ccchHHHHHHHHhhccceEEeccccc------chhhhhhHHHHHHHhCCCceEEe--eee-ccHHHHHHHHHhCCCEEEE
Confidence 34567788899999999999987642 14568899999999998754432 111 1678899999999998754
Q ss_pred cccc-h---HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 239 NIET-V---EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 239 nlEt-v---~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
++.. . .+...-+. ..++....++.+.+++. +++ +|..- --+.+|+...+ .+|.+.|-+|..+
T Consensus 325 g~g~gsi~~~~~~~g~g--~p~~~~l~~v~~~~~~~---~iP----VIa~GGI~~~~di~kal----a~GA~~V~vGs~~ 391 (511)
T 3usb_A 325 GIGPGSICTTRVVAGVG--VPQLTAVYDCATEARKH---GIP----VIADGGIKYSGDMVKAL----AAGAHVVMLGSMF 391 (511)
T ss_dssp CSSCSTTCCHHHHHCCC--CCHHHHHHHHHHHHHTT---TCC----EEEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCccccccccccCCC--CCcHHHHHHHHHHHHhC---CCc----EEEeCCCCCHHHHHHHH----HhCchhheecHHH
Confidence 3221 1 12211121 22333334444444442 333 33322 24888888776 4799999998765
No 60
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=83.93 E-value=5.8 Score=37.76 Aligned_cols=139 Identities=16% Similarity=0.122 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d----~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+++++++.|+++.+.|.+.|-|=|. .|+..+. .-...+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 42 ~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT--~--~~~Va~aAl~ 115 (294)
T 2y5s_A 42 FLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT--Y--KPAVMRAALA 115 (294)
T ss_dssp --CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC--C--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC--C--CHHHHHHHHH
Confidence 368899999999999999999998773 4554221 1245566667777653 34443322 2 5677777777
Q ss_pred cCcccccc-cccchHHHHHHhc----------CC----CC-----C--------HHHHHHHHHHHHHhCCCCce---EEE
Q 017200 231 SGLNVFAH-NIETVEELQSAVR----------DH----RA-----N--------FKQSLDVLMMAKDYVPAGTL---TKT 279 (375)
Q Consensus 231 aGldv~~h-nlEtv~rl~~~mr----------~r----~~-----s--------~~~~l~vl~~ak~~~p~Gl~---tkt 279 (375)
+|.+.++- +.+..+++++-+. .+ .. . .+...+.++.+.+ .|+. +--
T Consensus 116 aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~---~Gi~~~~Iil 192 (294)
T 2y5s_A 116 AGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRD---AGVAAERICV 192 (294)
T ss_dssp HTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEE
T ss_pred cCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHH---cCCChhhEEE
Confidence 78877643 1222234444321 10 00 1 2333445556665 4653 455
Q ss_pred eEEEecCCCH-HHHHHHHHHHHHcC
Q 017200 280 SIMLGCGETP-DQVVSTMEKVRAAG 303 (375)
Q Consensus 280 ~imvGlGET~-ee~~etl~~Lrelg 303 (375)
+--+|||.|. ++-+++|+.++++.
T Consensus 193 DPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 193 DPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp ECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred eCCCcccccchHHHHHHHHHHHHHH
Confidence 5556889999 88888888888765
No 61
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=83.92 E-value=9.6 Score=36.29 Aligned_cols=138 Identities=14% Similarity=0.227 Sum_probs=81.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d----~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (375)
.+++++++.|++..+.|.+.|-|-+. .|+.... .-...+..+|+.|++.. ++.|.+=+ + +.+.++.-.++
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT--~--~~~V~~aAl~a 134 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDT--Y--KAEVAKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEEC--S--CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeC--C--CHHHHHHHHHc
Confidence 56799999999999999999998864 3443221 11345666668887653 34343322 2 67888888888
Q ss_pred Cccccccc-ccc-hHHHHHH----------hcCCC-CC--------HHHHHHHHHHHHHhCCCCce---EEEeEEEecCC
Q 017200 232 GLNVFAHN-IET-VEELQSA----------VRDHR-AN--------FKQSLDVLMMAKDYVPAGTL---TKTSIMLGCGE 287 (375)
Q Consensus 232 Gldv~~hn-lEt-v~rl~~~----------mr~r~-~s--------~~~~l~vl~~ak~~~p~Gl~---tkt~imvGlGE 287 (375)
|.+.++.- .+. .+++++- |..++ .. .+...+.++.+.+ .|+. +--+-.+|||-
T Consensus 135 Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~---~GI~~~~IilDPg~Gfgk 211 (297)
T 1tx2_A 135 GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKD---AGVRDENIILDPGIGFAK 211 (297)
T ss_dssp TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEECCTTSSC
T ss_pred CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHH---cCCChhcEEEeCCCCcCC
Confidence 98888642 222 2344432 11111 11 1333445555665 4654 55555568899
Q ss_pred CHHHHHHHHHHHHHc
Q 017200 288 TPDQVVSTMEKVRAA 302 (375)
Q Consensus 288 T~ee~~etl~~Lrel 302 (375)
|.++-+++|+.++++
T Consensus 212 ~~~~n~~ll~~l~~l 226 (297)
T 1tx2_A 212 TPEQNLEAMRNLEQL 226 (297)
T ss_dssp CHHHHHHHHHTGGGG
T ss_pred CHHHHHHHHHHHHHH
Confidence 999777777766654
No 62
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=83.89 E-value=1.5 Score=39.91 Aligned_cols=155 Identities=15% Similarity=0.184 Sum_probs=86.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.|...+.+.++.+.+.|++.++|=--|..-.+.. ..-.+.++.|++... .+.+.+.+-| ..+.++.+.++|+|.
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~--~~g~~~v~~lr~~~~~~~~vhlmv~d---p~~~i~~~~~aGadg 88 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNI--TIGPLIVDAIRPLTKKTLDVHLMIVE---PEKYVEDFAKAGADI 88 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB--CBCHHHHHHHGGGCCSEEEEEEESSS---GGGTHHHHHHHTCSE
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcch--hhhHHHHHHHHhhcCCcEEEEEEccC---HHHHHHHHHHcCCCE
Confidence 5778888899999999999876655554433321 111378888887652 2344455533 134578999999999
Q ss_pred cccccc--chHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 236 FAHNIE--TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 236 ~~hnlE--tv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+....| ..+ ...++++.+++ .|+ +.++.+.- .|..|.++.+. + ++|+|.++..
T Consensus 89 v~vh~e~~~~~--------------~~~~~~~~i~~---~g~--~~gv~~~p-~t~~e~~~~~~---~-~~D~v~~msv- 143 (230)
T 1tqj_A 89 ISVHVEHNASP--------------HLHRTLCQIRE---LGK--KAGAVLNP-STPLDFLEYVL---P-VCDLILIMSV- 143 (230)
T ss_dssp EEEECSTTTCT--------------THHHHHHHHHH---TTC--EEEEEECT-TCCGGGGTTTG---G-GCSEEEEESS-
T ss_pred EEECcccccch--------------hHHHHHHHHHH---cCC--cEEEEEeC-CCcHHHHHHHH---h-cCCEEEEEEe-
Confidence 876665 322 22355566666 453 34444422 45555543322 2 5788877544
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 314 RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 314 ~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
.|+....+.. ....+.+++++++..+.|
T Consensus 144 ~pg~ggq~~~-~~~~~~i~~lr~~~~~~~ 171 (230)
T 1tqj_A 144 NPGFGGQSFI-PEVLPKIRALRQMCDERG 171 (230)
T ss_dssp CC----CCCC-GGGHHHHHHHHHHHHHHT
T ss_pred ccccCCccCc-HHHHHHHHHHHHHHHhcC
Confidence 3643232211 123456666666654443
No 63
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=83.64 E-value=6.9 Score=41.29 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC---CCcEEEeecCCCCCC-hHHHHHHHHc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK---PNMLIEALVPDFRGN-NGCVREVAKS 231 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~---p~i~Ie~l~pd~~g~-~e~l~~L~~a 231 (375)
+++.+|-++.+++|.+.|+++|-... +... ... .+.++.|.+.. +++.|.+|.+...++ +..++.++.+
T Consensus 89 ~~s~eeKl~Ia~~L~~lGVd~IEaGf---P~as---p~D-~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a 161 (644)
T 3hq1_A 89 PMSPARKRRMFDLLVRMGYKEIEVGF---PSAS---QTD-FDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGA 161 (644)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEC---TTTC---HHH-HHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC---hhH-HHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcC
Confidence 58999999999999999999998765 2111 111 34566666542 478888888753211 2345567788
Q ss_pred CcccccccccchH-HHHHHhcCCCCCHHHHHHHHH----HHHHhCCCCceEEEeEEEec-CC-----CHHHHHHHHHHHH
Q 017200 232 GLNVFAHNIETVE-ELQSAVRDHRANFKQSLDVLM----MAKDYVPAGTLTKTSIMLGC-GE-----TPDQVVSTMEKVR 300 (375)
Q Consensus 232 Gldv~~hnlEtv~-rl~~~mr~r~~s~~~~l~vl~----~ak~~~p~Gl~tkt~imvGl-GE-----T~ee~~etl~~Lr 300 (375)
|.+.+...+-+++ .+...+ +.+.++.++.+. .+++.... . +.+++-+=| +| ..+-+++.++.+.
T Consensus 162 ~~~~Vhif~stSd~h~~~~l---~~s~eevle~~~~~v~~a~~~~~~-~-~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ 236 (644)
T 3hq1_A 162 PRAIVHFYNSTSILQRRVVF---RANRAEVQAIATDGARKCVEQAAK-Y-PGTQWRFEYSPESYTGTELEYAKQVCDAVG 236 (644)
T ss_dssp SEEEEEEEEECCHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHH-S-CSSEEEEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHhhh-c-cCceEEEEEcCcccCCCCHHHHHHHHHHHH
Confidence 9888888788887 333333 467888887654 33442111 1 123333334 44 4566668888888
Q ss_pred Hc---CCc---EEee
Q 017200 301 AA---GVD---VMTF 309 (375)
Q Consensus 301 el---gvd---~v~i 309 (375)
++ |++ .|.|
T Consensus 237 eaG~~Gad~~~~I~L 251 (644)
T 3hq1_A 237 EVIAPTPERPIIFNL 251 (644)
T ss_dssp HHHCCCSSSCEEEEE
T ss_pred HhcCCCCCceeEEEe
Confidence 86 466 4554
No 64
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=83.60 E-value=5 Score=37.18 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=51.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHHhCCCcEEEeec---CCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALV---PDF 218 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G---------------~~~~~~lir~Ik~~~p~i~Ie~l~---pd~ 218 (375)
.+.++..+.++++.+.|++.|.|-.--.+.+-|+- .....+++++|++.++++.|.++. |-+
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 34578889999999999999988432222223321 133457899999874445554432 212
Q ss_pred -CCChHHHHHHHHcCcccc
Q 017200 219 -RGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 219 -~g~~e~l~~L~~aGldv~ 236 (375)
.+..+.++.+.++|+|.+
T Consensus 108 ~~g~~~~~~~~~~aGadgi 126 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSV 126 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEE
T ss_pred HhhHHHHHHHHHHcCCCEE
Confidence 123577889999999943
No 65
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=83.17 E-value=3.7 Score=39.47 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCC--CCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF--RGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr-~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~--~g~~e~l~~L~~aG 232 (375)
|++++|+.+.|.+..+.|..-|+|=-=|. +.-+....+.|.+++..|++..| +.|...++.- ....+.++.+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD-AVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC-CEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 68999999999999999998777765442 22222236789999999999875 5666555421 11356677776667
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
+|....|
T Consensus 107 Pe~aSln 113 (311)
T 3e49_A 107 PELASLN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 7766555
No 66
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=82.85 E-value=9.1 Score=36.56 Aligned_cols=152 Identities=12% Similarity=0.114 Sum_probs=86.9
Q ss_pred CcCCCCCCCCCCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc---ccHHHHHHHHHHHHHhCCCcEEEeecC-CC
Q 017200 143 CRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD---QGSGHFAQTVRKLKELKPNMLIEALVP-DF 218 (375)
Q Consensus 143 C~FC~v~~~r~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d---~G~~~~~~lir~Ik~~~p~i~Ie~l~p-d~ 218 (375)
|+-+.||.+. .+.+.-+.+++.+.+.|.+||-++- +...+.+ +..+.+.+-|+++++...+..+.+++- .+
T Consensus 87 ~tVigFP~G~----~~~e~K~~Ea~~Av~~GAdEIDmVi-nig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~ 161 (297)
T 4eiv_A 87 CAAVNFPEGT----GTPDTVSLEAVGALKDGADEIECLI-DWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGE 161 (297)
T ss_dssp EEEESTTTCC----CCHHHHHHHHHHHHHTTCSEEEEEC-CTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSC
T ss_pred EEEecCCCCC----CCHHHHHHHHHHHHHcCCCEEEeee-eHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 5556666543 3456777788888899999997762 2222333 446677778888887765566665432 23
Q ss_pred CCChHHH----HHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhC------------------CCCce
Q 017200 219 RGNNGCV----REVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYV------------------PAGTL 276 (375)
Q Consensus 219 ~g~~e~l----~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~------------------p~Gl~ 276 (375)
..+.+.+ +...++|+|.+.=. -- +. +.+++.++..-..+.+++.. +..+.
T Consensus 162 Lt~~e~i~~A~~ia~~AGADFVKTS----TG---f~-~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vg 233 (297)
T 4eiv_A 162 LQGGDIISRAAVAALEGGADFLQTS----SG---LG-ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIG 233 (297)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECC----CS---SS-SCCCCHHHHHHHHHHHHHHHCC------------------CCE
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEcC----CC---CC-CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCcee
Confidence 3244422 45568899976321 10 00 13444444433333333210 11244
Q ss_pred EEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 277 TKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 277 tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+|+. +|=--|.++.++.+..++++|.++++-
T Consensus 234 vKAs--~GGIrt~e~A~~~i~~~~elG~~wl~~ 264 (297)
T 4eiv_A 234 IKIE--VGDVHMAETADFLMQMIFENGPRSIVR 264 (297)
T ss_dssp EEEE--CTTCCHHHHHHHHHHHHHHHCGGGCST
T ss_pred EEec--CCCCCCHHHHHHHHHHHHHhCccccCC
Confidence 5544 122378999999999999888776543
No 67
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=82.34 E-value=14 Score=35.14 Aligned_cols=120 Identities=15% Similarity=0.232 Sum_probs=76.9
Q ss_pred HHHhCCCcEEEeecCCCC--C--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCC
Q 017200 202 LKELKPNMLIEALVPDFR--G--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPA 273 (375)
Q Consensus 202 Ik~~~p~i~Ie~l~pd~~--g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~ 273 (375)
++..+.++..-.++|--. + | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+....
T Consensus 8 ~~~~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~v~~~~g 80 (316)
T 3e96_A 8 LAKALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEF-------YALSLEEAKEEVRRTVEYVHG 80 (316)
T ss_dssp HHHHTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT
T ss_pred hhhcCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC
Confidence 444555666666666322 2 3 345667778888865332222221 135689999999999886533
Q ss_pred CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee-cCCCCCCCCCCccccCC-HHHHHHHHHHHHHhh
Q 017200 274 GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (375)
Q Consensus 274 Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~-qYl~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (375)
+.-+|+|.|.+-+|.++..+...++|+|.+-+. +|+.+ .+ .+-+++++.+|...+
T Consensus 81 ----rvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~----------~s~~~l~~~f~~va~a~~ 137 (316)
T 3e96_A 81 ----RALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPY----------VTAGGVYAYFRDIIEALD 137 (316)
T ss_dssp ----SSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSC----------CCHHHHHHHHHHHHHHHT
T ss_pred ----CCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCC----------CCHHHHHHHHHHHHHhCC
Confidence 345788887799999999999999999987664 33211 12 234566677776644
No 68
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=80.32 E-value=11 Score=36.06 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCC--CCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF--RGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr-~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~--~g~~e~l~~L~~aG 232 (375)
|++++|+.+.|.+..+.|..-|+|=.=|. +.-+....+.|.+++..|++..| +.|...++.- ....+.++.+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD-AILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC-CEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 68999999999999999998777765442 22222236789999999999875 5666555421 11355677776656
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
+|....|
T Consensus 107 Pe~aSln 113 (311)
T 3e02_A 107 PEVASMN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 7654433
No 69
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.87 E-value=31 Score=30.24 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=87.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEE-EeecCC-----C-C-CChHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI-EALVPD-----F-R-GNNGCVREV 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~I-e~l~pd-----~-~-g~~e~l~~L 228 (375)
.+.+.+.+.|+++.+.|...+.+. + .+.++.|++.. ++.+ ...-.+ + . .+.+.++.+
T Consensus 20 ~~~~~~~~~a~~~~~~Ga~~i~~~----------~----~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~ 84 (223)
T 1y0e_A 20 HSSFIMSKMALAAYEGGAVGIRAN----------T----KEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDEL 84 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE----------S----HHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCeeeccC----------C----HHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHH
Confidence 466888999999999999988653 1 24577777764 2333 111111 1 0 146788999
Q ss_pred HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEe
Q 017200 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~ 308 (375)
.++|.|.+..+.+.. .+ +. +...++++.+++.+| |+.+- ++. -|.+|.. .+.+.|+|.+.
T Consensus 85 ~~~Gad~v~l~~~~~------~~-p~---~~~~~~i~~~~~~~~-~~~v~----~~~-~t~~e~~----~~~~~G~d~i~ 144 (223)
T 1y0e_A 85 IESQCEVIALDATLQ------QR-PK---ETLDELVSYIRTHAP-NVEIM----ADI-ATVEEAK----NAARLGFDYIG 144 (223)
T ss_dssp HHHTCSEEEEECSCS------CC-SS---SCHHHHHHHHHHHCT-TSEEE----EEC-SSHHHHH----HHHHTTCSEEE
T ss_pred HhCCCCEEEEeeecc------cC-cc---cCHHHHHHHHHHhCC-CceEE----ecC-CCHHHHH----HHHHcCCCEEE
Confidence 999999876543321 01 11 223567777887664 45442 233 4666543 46789999987
Q ss_pred eecC-CCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 309 FGQY-MRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 309 i~qY-l~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
++.. +....+.. ...+..++.++++....+...+++|
T Consensus 145 ~~~~g~t~~~~~~----~~~~~~~~~~~~~~~~~~ipvia~G 182 (223)
T 1y0e_A 145 TTLHGYTSYTQGQ----LLYQNDFQFLKDVLQSVDAKVIAEG 182 (223)
T ss_dssp CTTTTSSTTSTTC----CTTHHHHHHHHHHHHHCCSEEEEES
T ss_pred eCCCcCcCCCCCC----CCCcccHHHHHHHHhhCCCCEEEec
Confidence 7532 11111111 0123345666666655555555555
No 70
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=79.67 E-value=23 Score=39.83 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHHhc--CCcEEEEEeeeCC-----CCCcccHHHHHHHHHHHHHhCCCcEEEeec--CCCCC-------
Q 017200 157 PDPDEPTNVAEAIASW--GLDYVVITSVDRD-----DLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (375)
Q Consensus 157 ld~eEi~~~a~al~~~--G~~eIvLTsgdr~-----dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd~~g------- 220 (375)
++.++.+..++++.+. |+..+-..||+.- .+.. .=.+.++.|++..|++.+..+. ++..|
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e----~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~ 627 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKE----NPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDN 627 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCC----CHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCC----CHHHHHHHHHHhCCCCeEEEEeccccccccccCCch
Confidence 7889999999999998 9999998888532 1111 1246778888888999888776 23222
Q ss_pred -ChHHHHHHHHcCccccccc
Q 017200 221 -NNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 221 -~~e~l~~L~~aGldv~~hn 239 (375)
..+.++...++|+|++...
T Consensus 628 v~~~~v~~a~~~Gvd~irif 647 (1150)
T 3hbl_A 628 VIHKFVQESAKAGIDVFRIF 647 (1150)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHhCCcCEEEEE
Confidence 2445788889999987654
No 71
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=79.61 E-value=6.3 Score=38.02 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=54.6
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCC-cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-c
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L 233 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l 233 (375)
..+.++....++.+.+.|+++|.++.+...+-. ..+..+..++++.|++.. ++.|- ..+.+. +.+..+.+.+.| +
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi-~~GgI~-s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTG-AVGLIT-SGWQAEEILQNGRA 301 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEE-EESSCC-CHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEE-eeCCCC-CHHHHHHHHHCCCe
Confidence 367899999999999999999999965322110 011223467778888765 23332 233432 678888888888 8
Q ss_pred cccccc
Q 017200 234 NVFAHN 239 (375)
Q Consensus 234 dv~~hn 239 (375)
|.+..+
T Consensus 302 D~V~iG 307 (340)
T 3gr7_A 302 DLVFLG 307 (340)
T ss_dssp SEEEEC
T ss_pred eEEEec
Confidence 987765
No 72
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=79.25 E-value=7.4 Score=37.12 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=63.2
Q ss_pred CCCcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017200 206 KPNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (375)
Q Consensus 206 ~p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tk 278 (375)
+.++..-.++|-- .+ | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 24 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g----r 92 (314)
T 3qze_A 24 IAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGES-------ATLDVEEHIQVIRRVVDQVKG----R 92 (314)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTG-------GGCCHHHHHHHHHHHHHHHTT----S
T ss_pred CCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 4456666667621 11 3 445666778888864322122221 135789999999999886432 4
Q ss_pred EeEEEec-CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 279 TSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 279 t~imvGl-GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.-+|+|. +.+-+|.++..+..+++|+|.+-+.
T Consensus 93 vpViaGvg~~st~eai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 93 IPVIAGTGANSTREAVALTEAAKSGGADACLLV 125 (314)
T ss_dssp SCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 5689999 4689999999999999999976554
No 73
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=78.96 E-value=4.6 Score=38.97 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=59.4
Q ss_pred EEEEeeeCCccCCCCcCCCCCCC--CCC-CCCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHH
Q 017200 129 TATIMILGDTCTRGCRFCNVKTS--RAP-PPPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKE 204 (375)
Q Consensus 129 tatfm~i~d~C~~~C~FC~v~~~--r~~-~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d~G~~~~~~lir~Ik~ 204 (375)
.-+|..+.+.|.--|.-+.-... ..| .|++++|+.+.|.+..+.|..-|+|=.=|.+| -+....+.|.+++..|++
T Consensus 14 ~~~~~~~~~kviIt~A~tGa~~t~~~~P~lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~ 93 (316)
T 3c6c_A 14 NLYFQGMSRKVILTCAVTGNAPFNPKHPSMPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRS 93 (316)
T ss_dssp -------CCEECEEEECCCSSCCCTTSTTCCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHT
T ss_pred cccccCCCCCeEEEEecCCCcCCccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHH
Confidence 45555566666666766655332 334 36899999999999999999888876554322 222237889999999998
Q ss_pred hCCCcEEEeecC
Q 017200 205 LKPNMLIEALVP 216 (375)
Q Consensus 205 ~~p~i~Ie~l~p 216 (375)
..|++.|.+.++
T Consensus 94 ~~~d~ii~~TTg 105 (316)
T 3c6c_A 94 SGTDIVLNLTCG 105 (316)
T ss_dssp TTCCCEEEEECC
T ss_pred HCCCeEEEeCCC
Confidence 878998887775
No 74
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=78.78 E-value=38 Score=31.66 Aligned_cols=120 Identities=11% Similarity=0.061 Sum_probs=74.8
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..++.+.|++..+.|..-|.+.. .+.+..+.. +.++.|++.. ++ .++.-||.-++.++.+.+.+|.|.+-.
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsVlt--d~~~f~Gs~----~~L~~ir~~v-~l--PVl~Kdfi~d~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSVLT--DTPSFQGAP----EFLTAARQAC-SL--PALRKDFLFDPYQVYEARSWGADCILI 148 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEEC--CSTTTCCCH----HHHHHHHHTS-SS--CEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEec--cccccCCCH----HHHHHHHHhc-CC--CEEECCccCCHHHHHHHHHcCCCEEEE
Confidence 35788899999999998885543 222222322 3446666543 22 234557766788899999999998765
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
... -.+.++.-+.++.++++ |+.+=..+ -|.+|+.. ..++|+++|.+.+
T Consensus 149 i~a------------~L~~~~l~~l~~~a~~l---Gl~~lvev-----h~~eEl~~----A~~~ga~iIGinn 197 (272)
T 3tsm_A 149 IMA------------SVDDDLAKELEDTAFAL---GMDALIEV-----HDEAEMER----ALKLSSRLLGVNN 197 (272)
T ss_dssp ETT------------TSCHHHHHHHHHHHHHT---TCEEEEEE-----CSHHHHHH----HTTSCCSEEEEEC
T ss_pred ccc------------ccCHHHHHHHHHHHHHc---CCeEEEEe-----CCHHHHHH----HHhcCCCEEEECC
Confidence 321 11345556677778883 65432222 36666543 3478999998863
No 75
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=78.76 E-value=31 Score=32.16 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=73.3
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
...+.+.|++..+.|..-|.+.. ++-. +..-.+.++.|++.. ++.| +.-||.-++.+++..+++|.|.+..
T Consensus 71 ~~~p~~~A~~y~~~GA~~isvlt---d~~~---f~Gs~~~l~~ir~~v-~lPv--l~kdfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 71 IADPAKLAQAYQDGGARIVSVVT---EQRR---FQGSLDDLDAVRASV-SIPV--LRKDFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp --CHHHHHHHHHHTTCSEEEEEC---CGGG---HHHHHHHHHHHHHHC-SSCE--EEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEec---Chhh---cCCCHHHHHHHHHhC-CCCE--EECccccCHHHHHHHHHcCCCEEEE
Confidence 34788889999999999986552 1111 222245667777653 2322 3446765777799999999998865
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
+.... +.++.-++++.+++ .|+.+ |+.. -|.+|+... .++|+++|.+++
T Consensus 142 i~a~l------------~~~~l~~l~~~a~~---lGl~~----lvev-~t~ee~~~A----~~~Gad~IGv~~ 190 (272)
T 3qja_A 142 IVAAL------------EQSVLVSMLDRTES---LGMTA----LVEV-HTEQEADRA----LKAGAKVIGVNA 190 (272)
T ss_dssp EGGGS------------CHHHHHHHHHHHHH---TTCEE----EEEE-SSHHHHHHH----HHHTCSEEEEES
T ss_pred ecccC------------CHHHHHHHHHHHHH---CCCcE----EEEc-CCHHHHHHH----HHCCCCEEEECC
Confidence 42221 23444566777777 36643 3322 366665433 357999999974
No 76
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=78.57 E-value=10 Score=39.10 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=52.6
Q ss_pred CCCcCCCCCCCCCCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe--ecCCC
Q 017200 141 RGCRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA--LVPDF 218 (375)
Q Consensus 141 ~~C~FC~v~~~r~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~--l~pd~ 218 (375)
.+=.||--............+|++.|+++.+.|.+++++.--+...-...+.....++|++|++.. .+.|.+ -+.++
T Consensus 261 kg~~~~vr~~~g~~~~~~~~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~ 339 (555)
T 1jvn_A 261 KGDQYDVREKSDGKGVRNLGKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV-FVPLTVGGGIKDI 339 (555)
T ss_dssp TTC---------------CHHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC-CSCEEEESSCSCE
T ss_pred ccceeeEEecccccCceEcCCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC-CCcEEEeCccccc
Confidence 344566543211111244568999999999999999988754421100001123467788887654 233332 11121
Q ss_pred C-------CChHHHHHHHHcCcccccccccch
Q 017200 219 R-------GNNGCVREVAKSGLNVFAHNIETV 243 (375)
Q Consensus 219 ~-------g~~e~l~~L~~aGldv~~hnlEtv 243 (375)
. ...+.++.+.++|+|.+..+-..+
T Consensus 340 ~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~ 371 (555)
T 1jvn_A 340 VDVDGTKIPALEVASLYFRSGADKVSIGTDAV 371 (555)
T ss_dssp ECTTCCEECHHHHHHHHHHHTCSEEEECHHHH
T ss_pred hhcccccchHHHHHHHHHHcCCCEEEECCHHh
Confidence 0 013779999999999988875443
No 77
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=78.53 E-value=8.5 Score=36.68 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=64.9
Q ss_pred HHhCCCcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCc
Q 017200 203 KELKPNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGT 275 (375)
Q Consensus 203 k~~~p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl 275 (375)
+..+.++..-.++|-- .+ | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+....
T Consensus 22 ~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g-- 92 (315)
T 3na8_A 22 SASIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEG-------AYLSDPEWDEVVDFTLKTVAH-- 92 (315)
T ss_dssp -CCCCEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHTT--
T ss_pred ccccCceEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC--
Confidence 3344556666677621 11 3 445677778888865332222221 135689999999999886432
Q ss_pred eEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 276 LTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 276 ~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+.-+|+|. +.+-+|.++..+..+++|+|.+-+.
T Consensus 93 --rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~ 126 (315)
T 3na8_A 93 --RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVL 126 (315)
T ss_dssp --SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred --CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 45689999 4889999999999999999976553
No 78
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=78.32 E-value=9.4 Score=38.43 Aligned_cols=75 Identities=8% Similarity=0.046 Sum_probs=49.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHHh---CC-CcEEEeecCCCCCChHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKEL---KP-NMLIEALVPDFRGNNGCVRE 227 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d----~G~~~~~~lir~Ik~~---~p-~i~Ie~l~pd~~g~~e~l~~ 227 (375)
.+.+++++.|+++.+.|.+.|-|=|. .|+.... .-...+..+|+.|++. .+ ++.|.+= .+ +.+.++.
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISID--T~--~~~Vaea 284 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSID--TR--KLEVMQK 284 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEE--CC--CHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEe--CC--CHHHHHH
Confidence 78899999999999999999988653 3443211 1134455667888763 22 4444432 23 6788888
Q ss_pred HHH--cCccc
Q 017200 228 VAK--SGLNV 235 (375)
Q Consensus 228 L~~--aGldv 235 (375)
-.+ +|.+.
T Consensus 285 AL~~~aGa~i 294 (442)
T 3mcm_A 285 ILAKHHDIIW 294 (442)
T ss_dssp HHHHHGGGCC
T ss_pred HHhhCCCCCE
Confidence 887 88887
No 79
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=76.91 E-value=37 Score=33.10 Aligned_cols=133 Identities=17% Similarity=0.254 Sum_probs=76.6
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnl 240 (375)
+..+.++.+.+.|++.|+|.+.... ...+.+.|+.+++.+|++.|-+ +.. .+.+..+.+.++|+|.+-.++
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~------~~~~~~~I~~ik~~~p~v~Vi~--G~v-~t~e~A~~a~~aGAD~I~vG~ 178 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG--GNV-ATAEGARALIEAGVSAVKVGI 178 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCEEEE--EEE-CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCC------CHHHHHHHHHHHHhcCCCceEe--eee-CCHHHHHHHHHcCCCEEEEec
Confidence 3456788889999999998653321 2457889999999988765532 111 167889999999999876543
Q ss_pred c-chHHHHHHhcCCCC-CHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 241 E-TVEELQSAVRDHRA-NFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 241 E-tv~rl~~~mr~r~~-s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+ ......+.+...+. ......++.+.++.. +++ +|..-| -+.+++.+.| .+|.+.|-++..+
T Consensus 179 gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~---~iP----VIA~GGI~~~~di~kal----a~GAd~V~vGs~f 243 (366)
T 4fo4_A 179 GPGSICTTRIVTGVGVPQITAIADAAGVANEY---GIP----VIADGGIRFSGDISKAI----AAGASCVMVGSMF 243 (366)
T ss_dssp SCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG---TCC----EEEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCCCCcccccCcccchHHHHHHHHHHHhhc---CCe----EEEeCCCCCHHHHHHHH----HcCCCEEEEChHh
Confidence 2 11101111111111 222222322323331 233 333222 3677776655 4699999888665
No 80
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=76.85 E-value=13 Score=32.28 Aligned_cols=65 Identities=8% Similarity=0.018 Sum_probs=39.8
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
++.+.++++.+.|++.|.|+- ++.. ...+.+.++.|++......+.+++. +.++.+.++|+|.+.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~---~~~~---~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~ 91 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI---KNAP---TREMYEIGKTLRQLTREYDALFFVD------DRVDVALAVDADGVQ 91 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC---CSCC---HHHHHHHHHHHHHHHHHTTCEEEEE------SCHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEECC---CCCC---HHHHHHHHHHHHHHHHHcCCeEEEc------ChHHHHHHcCCCEEE
Confidence 678888999999999998762 2222 3445666666654321112222332 235778888999874
No 81
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=76.76 E-value=40 Score=32.38 Aligned_cols=137 Identities=14% Similarity=0.188 Sum_probs=81.5
Q ss_pred cchHHHHHHHHH-hcCCcEEEEEee-eCCCCCcccHHHHHHHHHHHHHhCCCcEEEee---cCCCCCChHHHHHHHHcCc
Q 017200 159 PDEPTNVAEAIA-SWGLDYVVITSV-DRDDLADQGSGHFAQTVRKLKELKPNMLIEAL---VPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 159 ~eEi~~~a~al~-~~G~~eIvLTsg-dr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l---~pd~~g~~e~l~~L~~aGl 233 (375)
.+++.+.|+... +.|.+.|.|-+. .+++..+-..+.+.++|+.|.+.. ++.|.+= .|.+ +.+.++...++|.
T Consensus 79 ~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~--~~eV~eaAleaga 155 (323)
T 4djd_D 79 INEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEK--DHEVLEAVAEAAA 155 (323)
T ss_dssp TTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHH--HHHHHHHHHHHTT
T ss_pred HHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCC--CHHHHHHHHHhcC
Confidence 457899999988 999999998654 455544444667888898888764 3444332 0012 4677888777775
Q ss_pred c---cc-cccccchHHHHHHhcC--------CCCCHHHHHHHHHHHHHhCCCCce---EEEeEEEe-cCCCHHHHHHHHH
Q 017200 234 N---VF-AHNIETVEELQSAVRD--------HRANFKQSLDVLMMAKDYVPAGTL---TKTSIMLG-CGETPDQVVSTME 297 (375)
Q Consensus 234 d---v~-~hnlEtv~rl~~~mr~--------r~~s~~~~l~vl~~ak~~~p~Gl~---tkt~imvG-lGET~ee~~etl~ 297 (375)
+ .+ ..+.+..+++.+-+.. ...+.+..-+.++.+.+ .|+. +--+-.+| ||-+.++-+++|+
T Consensus 156 g~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~---~GI~~e~IIlDPg~g~fgk~~e~~l~~l~ 232 (323)
T 4djd_D 156 GENLLLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINE---MNLPLDHIVIDPSIGGLGYGIEYSFSIME 232 (323)
T ss_dssp TSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHT---TTCCGGGEEEECCCCCTTTTHHHHHHHHH
T ss_pred CCCCeEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHH---cCCCHHHEEEeCCCccccCCHHHHHHHHH
Confidence 4 22 2222323444443210 01133333444455555 4652 22333346 6789999999999
Q ss_pred HHHH
Q 017200 298 KVRA 301 (375)
Q Consensus 298 ~Lre 301 (375)
.++.
T Consensus 233 ~ir~ 236 (323)
T 4djd_D 233 RIRL 236 (323)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8886
No 82
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=76.70 E-value=58 Score=31.70 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=79.5
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.++..+.++++.+.|++.|+|-..... ..++.+.|+.|++..|++.|-+ ... .+.+..+.+.++|+|.+-.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~------~~~~~e~I~~ir~~~~~~~Vi~--G~V-~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAH------AKYVGKTLKSLRQLLGSRCIMA--GNV-ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCS------SHHHHHHHHHHHHHHTTCEEEE--EEE-CSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCC------cHhHHHHHHHHHHhcCCCeEEE--cCc-CCHHHHHHHHHcCCCEEEE
Confidence 456677899999999997776432211 3457889999998877655433 111 1678899999999998764
Q ss_pred cccc-hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 239 NIET-VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 239 nlEt-v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+... .--..+.+...+.. .+..+..+.+. .. -+|. |=--+.+|+...|. +|.|.|-+|..+
T Consensus 169 g~g~G~~~~tr~~~g~g~p---~l~aI~~~~~~----~~---PVIAdGGI~~~~di~kALa----~GAd~V~iGr~f 231 (361)
T 3r2g_A 169 GIGGGSVCSTRIKTGFGVP---MLTCIQDCSRA----DR---SIVADGGIKTSGDIVKALA----FGADFVMIGGML 231 (361)
T ss_dssp CCSSSSCHHHHHHHCCCCC---HHHHHHHHTTS----SS---EEEEESCCCSHHHHHHHHH----TTCSEEEESGGG
T ss_pred cCCCCcCccccccCCccHH---HHHHHHHHHHh----CC---CEEEECCCCCHHHHHHHHH----cCCCEEEEChHH
Confidence 3321 10001111111111 35555555552 11 2333 33357888887764 799999998665
No 83
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.61 E-value=9.5 Score=35.74 Aligned_cols=84 Identities=11% Similarity=-0.035 Sum_probs=52.6
Q ss_pred hHHHHHHHHcCcc---cccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLN---VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEK 298 (375)
Q Consensus 222 ~e~l~~L~~aGld---v~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~ 298 (375)
.+.++.+.++|.| .+..|+-. +.. +.-+.-+.+.+...++++.+++....-+.+|. ..+-+.+++.+..+.
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~-P~~-~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~----~~~~~~~~~~~~a~~ 182 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSC-PNV-PGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM----PPYFDIAHFDTAAAV 182 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCC-CCS-TTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE----CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcCC-CCC-CCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE----CCCCCHHHHHHHHHH
Confidence 4566777888888 77776531 111 11000123667788899988885311122232 234588899999999
Q ss_pred HHHcC-CcEEeeec
Q 017200 299 VRAAG-VDVMTFGQ 311 (375)
Q Consensus 299 Lrelg-vd~v~i~q 311 (375)
+.+.| +|.|.+..
T Consensus 183 ~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 183 LNEFPLVKFVTCVN 196 (314)
T ss_dssp HHTCTTEEEEEECC
T ss_pred HHhcCCceEEEEeC
Confidence 99999 99987643
No 84
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=76.00 E-value=6.1 Score=35.95 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=50.5
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..++.+.++++.+.|++.|.++..+.+... .| ...+.++.|++.. ++.|- ...+..+.+.++.+.++|+|.+..
T Consensus 29 ~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~-~g--~~~~~i~~i~~~~-~iPvi--~~ggi~~~~~i~~~~~~Gad~v~l 102 (266)
T 2w6r_A 29 GILLRDWVVEVEKRGAGEILLTSIDRDGTK-SG--YDTEMIRFVRPLT-TLPII--ASGGAGKMEHFLEAFLAGADKALA 102 (266)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTSSCS-SC--CCHHHHHHHGGGC-CSCEE--EESCCCSTHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccCC-Cc--ccHHHHHHHHHhc-CCCEE--EECCCCCHHHHHHHHHcCCcHhhh
Confidence 357888999999999999999865543221 11 2357788887754 33332 223333678888999999997765
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 103 g 103 (266)
T 2w6r_A 103 A 103 (266)
T ss_dssp C
T ss_pred h
Confidence 4
No 85
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.02 E-value=7.2 Score=37.36 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=54.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC--CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG- 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d--l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG- 232 (375)
..+.++..+.++.+.+.|+++|.++++.... .+. +.....+.++.|++.. ++.|- ..+.+. +.+..+.+.+.|
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi-~~Ggi~-s~~~a~~~l~~G~ 300 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQA-DMATG-AVGMIT-DGSMAEEILQNGR 300 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH-CCEEE-ECSSCC-SHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHC-CCCEE-EECCCC-CHHHHHHHHHcCC
Confidence 3678899999999999999999999875321 111 1122356777787764 34433 233432 678888888888
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
+|.+..+
T Consensus 301 aD~V~iG 307 (338)
T 1z41_A 301 ADLIFIG 307 (338)
T ss_dssp CSEEEEC
T ss_pred ceEEeec
Confidence 8988765
No 86
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=75.00 E-value=14 Score=37.20 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=80.8
Q ss_pred HHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc--------
Q 017200 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN-------- 239 (375)
Q Consensus 168 al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn-------- 239 (375)
++...|.+-|.|..-. +.+ ..+.++++..++..=.+.+++- +.+.++...++|.+.+..|
T Consensus 125 ea~~~GAD~ILLi~a~---l~~---~~l~~l~~~a~~lgm~~LvEvh------~~eE~~~A~~lga~iIGinnr~L~t~~ 192 (452)
T 1pii_A 125 LARYYQADACLLMLSV---LDD---DQYRQLAAVAHSLEMGVLTEVS------NEEEQERAIALGAKVVGINNRDLRDLS 192 (452)
T ss_dssp HHHHTTCSEEEEETTT---CCH---HHHHHHHHHHHHTTCEEEEEEC------SHHHHHHHHHTTCSEEEEESEETTTTE
T ss_pred HHHHcCCCEEEEEccc---CCH---HHHHHHHHHHHHcCCeEEEEeC------CHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 3778999999888653 332 4577777777764222344443 6788999999999998776
Q ss_pred --ccchHHHHHHhcC--------CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHH----------------
Q 017200 240 --IETVEELQSAVRD--------HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVV---------------- 293 (375)
Q Consensus 240 --lEtv~rl~~~mr~--------r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~---------------- 293 (375)
+++..++.+.+.+ +=.+.++-.++.+. - .|+.+.+.+|=- +...+.+
T Consensus 193 ~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a----~avLVGealmr~--~d~~~~~~~l~~~~~KICGit~~ 265 (452)
T 1pii_A 193 IDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-A----NGFLIGSALMAH--DDLHAAVRRVLLGENKVCGLTRG 265 (452)
T ss_dssp ECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-C----SEEEECHHHHTC--SCHHHHHHHHHHCSCEECCCCSH
T ss_pred CCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-C----CEEEEcHHHcCC--cCHHHHHHHHHHHhccccCCCcH
Confidence 2444566666531 01445444333322 1 345555555421 2222222
Q ss_pred HHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHH
Q 017200 294 STMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERY 334 (375)
Q Consensus 294 etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l 334 (375)
+.+....++|.|.+.|- |+.+++ |+|+++....+
T Consensus 266 eda~~a~~~Gad~iGfI-f~~~Sp------R~V~~~~a~~i 299 (452)
T 1pii_A 266 QDAKAAYDAGAIYGGLI-FVATSP------RCVNVEQAQEV 299 (452)
T ss_dssp HHHHHHHHHTCSEEEEE-CCTTCT------TBCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEee-cCCCCC------CCCCHHHHHHH
Confidence 22344557799999995 443343 45666655544
No 87
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=74.83 E-value=45 Score=29.50 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=73.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.++.++++.+.|++-|-++- . + + .-.+.++.+++ |++.+..-+ +. +.+.++...++|.|.+
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~--k-~-~-----~~~~~i~~~~~--~~~~~gag~--vl-~~d~~~~A~~~GAd~v 87 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITL--R-T-E-----KGLEALKALRK--SGLLLGAGT--VR-SPKEAEAALEAGAAFL 87 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEEC--S-S-T-----HHHHHHHHHTT--SSCEEEEES--CC-SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--C-C-h-----HHHHHHHHHhC--CCCEEEeCe--Ee-eHHHHHHHHHcCCCEE
Confidence 4678899999999999999888872 1 1 1 12467777776 677665543 22 6789999999999976
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.- +..+ .++++.+++. |+. +|.|. .|.+|+.+.+ +.|.|++.++
T Consensus 88 ~~--------------~~~d----~~v~~~~~~~---g~~----~i~G~-~t~~e~~~A~----~~Gad~v~~f 131 (207)
T 2yw3_A 88 VS--------------PGLL----EEVAALAQAR---GVP----YLPGV-LTPTEVERAL----ALGLSALKFF 131 (207)
T ss_dssp EE--------------SSCC----HHHHHHHHHH---TCC----EEEEE-CSHHHHHHHH----HTTCCEEEET
T ss_pred Ec--------------CCCC----HHHHHHHHHh---CCC----EEecC-CCHHHHHHHH----HCCCCEEEEe
Confidence 32 1111 3555555653 332 45563 5777775544 5699999885
No 88
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=74.73 E-value=12 Score=36.46 Aligned_cols=106 Identities=8% Similarity=0.079 Sum_probs=64.3
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeee--------CCCCC---------------cccHHHHHHHHHHHHHhCCCcEEEee
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVD--------RDDLA---------------DQGSGHFAQTVRKLKELKPNMLIEAL 214 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgd--------r~dl~---------------d~G~~~~~~lir~Ik~~~p~i~Ie~l 214 (375)
|.+...+.++++++.|++-|-++.=. -.++. ..+.+++..+.+.-++ . ++.+ +
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~-~-Gi~~--~ 108 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES-K-GMIF--I 108 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHH-T-TCEE--E
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHH-h-CCeE--E
Confidence 57888999999999999999988331 10011 1133444443333333 2 3333 3
Q ss_pred cCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHHhc---------CCCCCHHHHHHHHHHHHH
Q 017200 215 VPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVR---------DHRANFKQSLDVLMMAKD 269 (375)
Q Consensus 215 ~pd~~g~~e~l~~L~~aGldv~~hn-lEtv~-rl~~~mr---------~r~~s~~~~l~vl~~ak~ 269 (375)
+--| +.+.++.|.+.|+|.|..+ -|..+ .|++.+. ..-++.++++..++.++.
T Consensus 109 st~~--d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 109 STLF--SRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIRE 172 (349)
T ss_dssp EEEC--SHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHH
T ss_pred EeeC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 3334 7888999988899998776 23333 5555543 123567777777777766
No 89
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=74.44 E-value=12 Score=42.15 Aligned_cols=135 Identities=14% Similarity=0.095 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHHhcCCc--EEEEEeeeCCC-----CCcccHHHHHHHHHHHHHhCCCcEEEeecC--CCCC------
Q 017200 156 PPDPDEPTNVAEAIASWGLD--YVVITSVDRDD-----LADQGSGHFAQTVRKLKELKPNMLIEALVP--DFRG------ 220 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~--eIvLTsgdr~d-----l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~p--d~~g------ 220 (375)
.++.++.+.+|+++.+.|+. .|-+.||..-+ +.. . =.+.++.+++..|++.+..+.- +..|
T Consensus 569 ~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~---~-p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~ 644 (1165)
T 2qf7_A 569 RMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTE---D-PWERLALIREGAPNLLLQMLLRGANGVGYTNYPD 644 (1165)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCC---C-HHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCC---C-HHHHHHHHHHHchhhHHHHHhccccccccccCCc
Confidence 37899999999999999654 47765543211 000 0 1245677777778888877642 1111
Q ss_pred --ChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-------C-CCHH
Q 017200 221 --NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-------G-ETPD 290 (375)
Q Consensus 221 --~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-------G-ET~e 290 (375)
..+.++...++|+|++....-. . +.+.....++.+++ .|..+...+.+.. | -+.+
T Consensus 645 ~~~~~~i~~a~~~g~d~irif~sl--------~----~~~~~~~~i~~~~~---~g~~v~~~i~~~~~~~d~~r~~~~~~ 709 (1165)
T 2qf7_A 645 NVVKYFVRQAAKGGIDLFRVFDCL--------N----WVENMRVSMDAIAE---ENKLCEAAICYTGDILNSARPKYDLK 709 (1165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECTT--------C----CGGGGHHHHHHHHH---TTCEEEEEEECCSCTTCTTSGGGCHH
T ss_pred hhHHHHHHHHHhcCcCEEEEEeeH--------H----HHHHHHHHHHHHHh---ccceEEEEEEEeccccCCCCCCCCHH
Confidence 1356888899999986553111 1 12233345566666 3444444443321 0 2556
Q ss_pred HHHHHHHHHHHcCCcEEee
Q 017200 291 QVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 291 e~~etl~~Lrelgvd~v~i 309 (375)
.+++.++.+.+.|++.|.|
T Consensus 710 ~~~~~~~~~~~~Ga~~i~l 728 (1165)
T 2qf7_A 710 YYTNLAVELEKAGAHIIAV 728 (1165)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 6667777777777776666
No 90
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=74.24 E-value=3.4 Score=37.47 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=51.2
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.++.+.|+.+.+.|+++|+++..+..... .| ...++++.|++.. ++.| +......+.+.++.+.++|+|.+..+
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~-~~--~~~~~i~~i~~~~-~ipv--i~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTK-SG--YDTEMIRFVRPLT-TLPI--IASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCS-SC--CCHHHHHHHGGGC-CSCE--EEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCC-Cc--ccHHHHHHHHHhC-CCCE--EEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 47888999999999999999987643211 11 1357788888764 3333 22222337788999999999987765
No 91
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=73.75 E-value=16 Score=34.63 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=67.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.. . +.-+|+|. +.+-+|.++..+...
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Lt~~Er~~v~~~~v~~~-g----rvpViaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEA-------PKLDAAEAEAVATRFIKRA-K----SMQVIVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTG-------GGSCHHHHHHHHHHHHHHC-T----TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEeCccCcCh-------hhCCHHHHHHHHHHHHHHc-C----CCcEEEecCCCCHHHHHHHHHHHH
Confidence 446677778888864322122221 1356899999999999975 2 45589999 579999999999999
Q ss_pred HcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 301 elgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
++|+|.+-+. .|..+ + -..+-+++++.+|...+
T Consensus 100 ~~Gadavlv~---~P~~~--~----s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 100 DAGAAGVMIA---PPPSL--R----TDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHTCSEEEEC---CCTTC--C----SHHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEEC---CCCCC--C----CHHHHHHHHHHHHHhCC
Confidence 9999987663 23211 1 01334666777777655
No 92
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=73.74 E-value=54 Score=29.98 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=52.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHHhCCCcEEEeec---CCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALV---PDF 218 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G---------------~~~~~~lir~Ik~~~p~i~Ie~l~---pd~ 218 (375)
.+.++-++.++++.+.|++.|-|-.--.+.+.|+- .+.+.+++++|++..|++.+-++. |-+
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~ 107 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIF 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHH
Confidence 45678899999999999999888432222222321 135668899999887666665441 111
Q ss_pred C-CChHHHHHHHHcCcccc
Q 017200 219 R-GNNGCVREVAKSGLNVF 236 (375)
Q Consensus 219 ~-g~~e~l~~L~~aGldv~ 236 (375)
. |....++.++++|+|.+
T Consensus 108 ~~g~~~f~~~~~~aG~dgv 126 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGF 126 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEE
T ss_pred HhhHHHHHHHHHHcCCCEE
Confidence 1 22466788999999954
No 93
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=73.36 E-value=7.1 Score=35.12 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=52.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+++.+.++++.+.|++.|.++..+.+. .+.....+.+++|++.. ++.| +......+.+.++.+.++|+|.+..
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~---~~~~~~~~~i~~i~~~~-~iPv--i~~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATH---EERAILLDVVARVAERV-FIPL--TVGGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSST---TCHHHHHHHHHHHHTTC-CSCE--EEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCccc---cCccccHHHHHHHHHhC-CCCE--EEECCcCCHHHHHHHHHcCCCEEEE
Confidence 3578889999999999999988543321 12445678888888754 3333 3333333688999999999998765
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 104 g 104 (252)
T 1ka9_F 104 N 104 (252)
T ss_dssp C
T ss_pred C
Confidence 4
No 94
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=73.02 E-value=11 Score=37.21 Aligned_cols=106 Identities=16% Similarity=0.144 Sum_probs=61.1
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCC--Cc----------------------ccHHHHHHHHHHHHHhCCCcEEEe
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDL--AD----------------------QGSGHFAQTVRKLKELKPNMLIEA 213 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl--~d----------------------~G~~~~~~lir~Ik~~~p~i~Ie~ 213 (375)
|.+...+.++++++.|++-|-++.-.-+.+ ++ .+.+++..+.+.-++ . ++ ..
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~-~-Gi--~~ 117 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCRE-K-QV--IF 117 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHH-T-TC--EE
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHH-c-CC--cE
Confidence 678889999999999999998876532221 10 123334333333322 2 23 33
Q ss_pred ecCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHHhcC---------CCCCHHHHHHHHHHHHH
Q 017200 214 LVPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVRD---------HRANFKQSLDVLMMAKD 269 (375)
Q Consensus 214 l~pd~~g~~e~l~~L~~aGldv~~hn-lEtv~-rl~~~mr~---------r~~s~~~~l~vl~~ak~ 269 (375)
++--| +.+.++.|.+.|+|.|..+ -|..+ .|++.+.. .-++.++++..++.+++
T Consensus 118 ~stpf--D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~ 182 (385)
T 1vli_A 118 LSTVC--DEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRA 182 (385)
T ss_dssp ECBCC--SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred EEccC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 44445 7889999988888988775 23223 44444421 12345555555555544
No 95
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=72.64 E-value=53 Score=29.36 Aligned_cols=126 Identities=11% Similarity=0.130 Sum_probs=79.7
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.+++.+.++.+.+.|+.-+++... +....+.. ...+.+...+..-.|. ....+...+
T Consensus 17 ~t~~~i~~l~~~a~~~g~~~v~v~~~------------~v~~~~~~---l~~v~v~~v~~~P~g~~~~~~k~~~~~~A~~ 81 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEELGIYAVCVNPY------------HVKLASSI---AKKVKVCCVIGFPLGLNKTSVKVKEAVEAVR 81 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECGG------------GHHHHHHH---CSSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEECHH------------HHHHHHHH---hcCCceeeEecCCCCccchhhhHHHHHHHHH
Confidence 46778888899999999998884421 12222211 1145665444211121 234456677
Q ss_pred cCccccc--ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEE
Q 017200 231 SGLNVFA--HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVM 307 (375)
Q Consensus 231 aGldv~~--hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v 307 (375)
.|.|.+. .|+-. ++ ...++..++.++.+++..+ ++.+|. |+-- +-|++++.+..+.+.+.|+|+|
T Consensus 82 ~Gad~Id~viN~g~-------~~--~~~~~~~~~~i~~v~~a~~-pv~vKv--i~e~~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 82 DGAQELDIVWNLSA-------FK--SEKYDFVVEELKEIFRETP-SAVHKV--IVETPYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp TTCSEEEEECCHHH-------HH--TTCHHHHHHHHHHHHHTCT-TSEEEE--ECCGGGCCHHHHHHHHHHHHHHTCSEE
T ss_pred cCCCEEEEEecHHH-------Hh--cCChHHHHHHHHHHHHHhc-CceEEE--EEeCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 8888776 33221 33 3567888888999988764 344444 3222 4588899999999999999999
Q ss_pred ee
Q 017200 308 TF 309 (375)
Q Consensus 308 ~i 309 (375)
..
T Consensus 150 ~t 151 (225)
T 1mzh_A 150 KT 151 (225)
T ss_dssp EC
T ss_pred EE
Confidence 55
No 96
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=72.40 E-value=10 Score=34.13 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=51.7
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..++.+.++++.+.|++.+.+...+.. . .+.....++++.|++.. ++.+- ......+.+.++.+.++|+|.+..
T Consensus 29 ~~d~~~~a~~~~~~Gad~i~v~d~~~~-~--~~~~~~~~~i~~i~~~~-~ipvi--~~ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 29 SGDPVELGKFYSEIGIDELVFLDITAS-V--EKRKTMLELVEKVAEQI-DIPFT--VGGGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp TTCHHHHHHHHHHTTCCEEEEEESSCS-S--SHHHHHHHHHHHHHTTC-CSCEE--EESSCCSHHHHHHHHHTTCSEEEE
T ss_pred ccCHHHHHHHHHHcCCCEEEEECCchh-h--cCCcccHHHHHHHHHhC-CCCEE--EeCCCCCHHHHHHHHHcCCCEEEE
Confidence 357888899999999999999854332 1 23445678888888754 23332 222333678899999999998765
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 103 g 103 (253)
T 1thf_D 103 N 103 (253)
T ss_dssp S
T ss_pred C
Confidence 4
No 97
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=72.12 E-value=64 Score=31.36 Aligned_cols=116 Identities=21% Similarity=0.272 Sum_probs=71.9
Q ss_pred HHHHHHHhcCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
+.|.++.+.|. .-|. ..+. .+.+.+.++.+|+..+ +.+.+.++......+.++.+.++|+|++..+ +
T Consensus 61 ~lA~avA~aGGlg~i~------~~~s---~e~~~~~i~~vk~~~~-l~vga~vg~~~~~~~~~~~lieaGvd~I~id--t 128 (366)
T 4fo4_A 61 RLAIALAQEGGIGFIH------KNMS---IEQQAAQVHQVKISGG-LRVGAAVGAAPGNEERVKALVEAGVDVLLID--S 128 (366)
T ss_dssp HHHHHHHHTTCEEEEC------SSSC---HHHHHHHHHHHHTTTS-CCCEEECCSCTTCHHHHHHHHHTTCSEEEEE--C
T ss_pred HHHHHHHHcCCceEee------cCCC---HHHHHHHHHHHHhcCc-eeEEEEeccChhHHHHHHHHHhCCCCEEEEe--C
Confidence 55666666654 3331 1222 5667888888887533 4444433211115788999999999987532 1
Q ss_pred hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 243 v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
. .+ ..+.+++.++.+++.+|. +. +++|..-|.++. +.+.+.|+|.|.++
T Consensus 129 a---------~G-~~~~~~~~I~~ik~~~p~-v~----Vi~G~v~t~e~A----~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 129 S---------HG-HSEGVLQRIRETRAAYPH-LE----IIGGNVATAEGA----RALIEAGVSAVKVG 177 (366)
T ss_dssp S---------CT-TSHHHHHHHHHHHHHCTT-CE----EEEEEECSHHHH----HHHHHHTCSEEEEC
T ss_pred C---------CC-CCHHHHHHHHHHHHhcCC-Cc----eEeeeeCCHHHH----HHHHHcCCCEEEEe
Confidence 1 11 235778889999987654 43 344555677765 44567899999885
No 98
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=72.05 E-value=40 Score=31.29 Aligned_cols=98 Identities=11% Similarity=0.194 Sum_probs=64.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +|+|. +.+-+|.++..+..+
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g------vi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLG-------PALSLQEKMELTDAATSAAR-R------VIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHHHHCS-S------EEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C------EEEeeCCCCHHHHHHHHHHHH
Confidence 445666777888764222112221 13568999999999998642 3 99999 558899999999999
Q ss_pred HcCCcEEeee-cCCCCCCCCCCccccCC-HHHHHHHHHHHHHhh
Q 017200 301 AAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (375)
Q Consensus 301 elgvd~v~i~-qYl~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (375)
++|+|.+-+. +|+-+ . .+ .+-+++++.+|...+
T Consensus 88 ~~Gadavlv~~P~y~~----~-----~s~~~l~~~f~~va~a~~ 122 (286)
T 2r91_A 88 SRGAEAVASLPPYYFP----R-----LSERQIAKYFRDLCSAVS 122 (286)
T ss_dssp HTTCSEEEECCSCSST----T-----CCHHHHHHHHHHHHHHCS
T ss_pred hcCCCEEEEcCCcCCC----C-----CCHHHHHHHHHHHHHhcC
Confidence 9999976653 22211 0 12 334677778877644
No 99
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=72.03 E-value=48 Score=28.58 Aligned_cols=112 Identities=21% Similarity=0.248 Sum_probs=71.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.++++..+.++.+.+.|++-|.++... ++ ..+.++.+++.+| +..|.+-+- .+.+.++...++|+|.
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~----~~-----~~~~i~~ir~~~~~~~~ig~~~v---~~~~~~~~a~~~Gad~ 86 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV----PD-----ADTVIKELSFLKEKGAIIGAGTV---TSVEQCRKAVESGAEF 86 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHTHHHHHTTCEEEEESC---CSHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC----hh-----HHHHHHHHHHHCCCCcEEEeccc---CCHHHHHHHHHcCCCE
Confidence 578899999999999999988776432 21 2456777877665 566654221 1567788888999998
Q ss_pred ccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+ .+ +... -++++.+++. |+.+-. |. -|.+|+. ...++|+|.+.+.
T Consensus 87 i-v~-------------~~~~----~~~~~~~~~~---g~~vi~----g~-~t~~e~~----~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 87 I-VS-------------PHLD----EEISQFCKEK---GVFYMP----GV-MTPTELV----KAMKLGHTILKLF 131 (205)
T ss_dssp E-EC-------------SSCC----HHHHHHHHHH---TCEEEC----EE-CSHHHHH----HHHHTTCCEEEET
T ss_pred E-Ec-------------CCCC----HHHHHHHHHc---CCcEEC----Cc-CCHHHHH----HHHHcCCCEEEEc
Confidence 7 21 1111 2455666663 555433 43 2566543 3457888888764
No 100
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=71.91 E-value=69 Score=30.35 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=45.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH---HhCCCcEEEeecCCCCCChHHHHHHHH--c
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK---ELKPNMLIEALVPDFRGNNGCVREVAK--S 231 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik---~~~p~i~Ie~l~pd~~g~~e~l~~L~~--a 231 (375)
.+++++++.|++..+.|.+.|-|=++.. .. + ..+.+..++..|+ +. .++.|.+=+ + +.+.++.-.+ +
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~-~v-~-~~eem~rvv~~i~~~~~~-~~vpisIDT--~--~~~V~eaaL~~~~ 105 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDG-LL-D-ARTEMTTFLNLIMSEPEI-ARVPVMIDS--S--KWEVIEAGLKCLQ 105 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCT-TS-C-HHHHHHHHHHHHHTCHHH-HTSCEEEEC--S--CHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCC-CC-C-HHHHHHHHHHHHHHhhhc-CCCeEEEeC--C--CHHHHHHHHHhcC
Confidence 5789999999999999999999877532 12 1 1233444444443 32 233333322 2 5677777777 6
Q ss_pred Cccccc
Q 017200 232 GLNVFA 237 (375)
Q Consensus 232 Gldv~~ 237 (375)
|.+.++
T Consensus 106 Ga~iIN 111 (300)
T 3k13_A 106 GKSIVN 111 (300)
T ss_dssp SCCEEE
T ss_pred CCCEEE
Confidence 877664
No 101
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=71.75 E-value=11 Score=35.45 Aligned_cols=80 Identities=14% Similarity=0.168 Sum_probs=53.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
-+++++.+.++++.+.|++.|.|---..-.. ...+.++++.|++..|++.|.+ .+-++---......-.++|++.
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIGVGT----AGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSSCCC----HHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCcC----HHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 5689999999999999999998872222111 4568899999998887665543 2223311234455556789988
Q ss_pred ccccc
Q 017200 236 FAHNI 240 (375)
Q Consensus 236 ~~hnl 240 (375)
++..+
T Consensus 232 vd~tv 236 (302)
T 2ftp_A 232 FDSSV 236 (302)
T ss_dssp EEEBG
T ss_pred EEecc
Confidence 76654
No 102
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=71.25 E-value=80 Score=30.87 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=83.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.|.+..++.++++.+.|.+-|.++-.+ ..-++.++.|++..+ +. ++.|+.-+...+..-.++|+|-+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~---------~~~a~al~~I~~~~~-vP---lvaDiHf~~~lal~a~e~G~dkl 109 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH---------KEDVEALEEIVKKSP-MP---VIADIHFAPSYAFLSMEKGVHGI 109 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHCS-SC---EEEECCSCHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC---------hHHHHHHHHHHhcCC-CC---EEEeCCCCHHHHHHHHHhCCCeE
Confidence 678888999999999999999987432 113678888888753 22 33342117777778888999987
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe---------cC-CCHHHHHH----HHHHHHHc
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG---------CG-ETPDQVVS----TMEKVRAA 302 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvG---------lG-ET~ee~~e----tl~~Lrel 302 (375)
-.|-- . +. +-++.-++++.|++. |+++..++=-| +| .|.|.+++ +++.++++
T Consensus 110 RINPG---N----ig----~~~~~~~vv~~ak~~---~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~ 175 (366)
T 3noy_A 110 RINPG---N----IG----KEEIVREIVEEAKRR---GVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKW 175 (366)
T ss_dssp EECHH---H----HS----CHHHHHHHHHHHHHH---TCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred EECCc---c----cC----chhHHHHHHHHHHHc---CCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhC
Confidence 65511 1 11 134556788999984 56655543333 43 67766665 45677888
Q ss_pred CCcEEee
Q 017200 303 GVDVMTF 309 (375)
Q Consensus 303 gvd~v~i 309 (375)
+++-+-+
T Consensus 176 gf~~ivi 182 (366)
T 3noy_A 176 GFTNYKV 182 (366)
T ss_dssp TCCCEEE
T ss_pred CCCeEEE
Confidence 9865544
No 103
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=71.09 E-value=49 Score=33.31 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=80.8
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.+..+.++.+.+.|++-|+|-+.... .....++|+.|++.+|++.|-+ .+. .+.+.++.+.++|+|.+..+
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~------~~~~~~~i~~i~~~~~~~pvi~--~~v-~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGN------SVYQIAMVHYIKQKYPHLQVIG--GNV-VTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCC------SHHHHHHHHHHHHHCTTCEEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCc------chhHHHHHHHHHHhCCCCceEe--ccc-chHHHHHHHHHcCCCEEEEC
Confidence 45677888899999999998443321 1335789999999887665532 111 16788999999999987332
Q ss_pred -----ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 240 -----IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 240 -----lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+.+.. ...+-+......+..+..+++.. +++ +|. |=--+.+|+.+.+. +|.+.|-++..+
T Consensus 325 ~~~G~~~~t~----~~~~~g~~~~~~~~~~~~~~~~~--~ip----Via~GGI~~~~di~kala----~GAd~V~iG~~~ 390 (514)
T 1jcn_A 325 MGCGSICITQ----EVMACGRPQGTAVYKVAEYARRF--GVP----IIADGGIQTVGHVVKALA----LGASTVMMGSLL 390 (514)
T ss_dssp SSCSCCBTTB----CCCSCCCCHHHHHHHHHHHHGGG--TCC----EEEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCCcccccc----cccCCCccchhHHHHHHHHHhhC--CCC----EEEECCCCCHHHHHHHHH----cCCCeeeECHHH
Confidence 22211 01111222345566666666532 232 222 22247788887764 799999998654
No 104
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=70.91 E-value=60 Score=30.83 Aligned_cols=139 Identities=17% Similarity=0.131 Sum_probs=68.9
Q ss_pred HHHHhcCCcEEEEEeeeCCCCCc-ccHHHHHHHHHHHHHhCCCcEEEeecCCCCC-------------C-----------
Q 017200 167 EAIASWGLDYVVITSVDRDDLAD-QGSGHFAQTVRKLKELKPNMLIEALVPDFRG-------------N----------- 221 (375)
Q Consensus 167 ~al~~~G~~eIvLTsgdr~dl~d-~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g-------------~----------- 221 (375)
+.+++.|+..|.|---..+. +. ...+++.++++..++.-=.+.+.+-..|+-. +
T Consensus 34 ~ilk~~G~N~VRi~~w~~P~-~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~y 112 (332)
T 1hjs_A 34 NILAANGVNTVRQRVWVNPA-DGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNY 112 (332)
T ss_dssp HHHHHTTCCEEEEEECSSCT-TCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEeeeeCCC-CCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHH
Confidence 34567888888874211111 10 1255666677777664222333322212111 1
Q ss_pred -hHHHHHHHHcCc--ccccccccchHHHHHHhcCCCCCHHHHHHHH----HHHHHhC--CCCceEEEeEEEec--CCCHH
Q 017200 222 -NGCVREVAKSGL--NVFAHNIETVEELQSAVRDHRANFKQSLDVL----MMAKDYV--PAGTLTKTSIMLGC--GETPD 290 (375)
Q Consensus 222 -~e~l~~L~~aGl--dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl----~~ak~~~--p~Gl~tkt~imvGl--GET~e 290 (375)
.+.++.+++.|. +.+..+.|....+.---. ...+++...+.+ +.+|+.. | .+-+|+.+ |...+
T Consensus 113 t~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g-~~~~~~~~~~l~~~~~~avR~~~~~p-----~~~v~ih~~~~~~~~ 186 (332)
T 1hjs_A 113 TLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTG-RTENWANIARLLHSAAWGIKDSSLSP-----KPKIMIHLDNGWDWG 186 (332)
T ss_dssp HHHHHHHHHHTTCCCSEEEESSSGGGEETBTTE-ETTCHHHHHHHHHHHHHHHHTSCCSS-----CCEEEEEESCTTCHH
T ss_pred HHHHHHHHHHcCCCCCEEEEeecccccccCcCC-CccCHHHHHHHHHHHHHHHHHhccCC-----CCeEEEEeCCccchH
Confidence 266777777664 444445554332110000 112444444444 3455543 3 23345555 66766
Q ss_pred HHHHHHHHHHHcC------CcEEeeecC
Q 017200 291 QVVSTMEKVRAAG------VDVMTFGQY 312 (375)
Q Consensus 291 e~~etl~~Lrelg------vd~v~i~qY 312 (375)
.+.--++.+.+.+ +|+|.+.-|
T Consensus 187 ~~~~~~d~~~~~g~~~~~~~DvIG~syY 214 (332)
T 1hjs_A 187 TQNWWYTNVLKQGTLELSDFDMMGVSFY 214 (332)
T ss_dssp HHHHHHHHHHTTSSSCGGGCCEEEEECC
T ss_pred HHHHHHHHHHhcCCCCCCCcCEEEEecC
Confidence 6666667777655 789999644
No 105
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=70.62 E-value=31 Score=32.51 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=79.4
Q ss_pred CCcCCCCCCCCCCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHH---HHHHHHHHHHHhCCCcEEEeecC-C
Q 017200 142 GCRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSG---HFAQTVRKLKELKPNMLIEALVP-D 217 (375)
Q Consensus 142 ~C~FC~v~~~r~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~---~~~~lir~Ik~~~p~i~Ie~l~p-d 217 (375)
=|.-++||.+. .+.+..+.+++.+.+.|.++|-++-- ...+.++..+ .+.+-|+++++..++..+.+++. .
T Consensus 92 v~tVigFP~G~----~~~~~Kv~E~~~Av~~GAdEIDmVin-ig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~ 166 (281)
T 2a4a_A 92 IACVINFPYGT----DSMEKVLNDTEKALDDGADEIDLVIN-YKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVG 166 (281)
T ss_dssp EEEEESTTTCC----SCHHHHHHHHHHHHHHTCSEEEEECC-HHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHH
T ss_pred EEEEeCCCCCC----CCHHHHHHHHHHHHHcCCCEEEEecc-hHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 35555666543 34566778888889999999977632 1112222234 66777788877666666655442 1
Q ss_pred CCCChH----HHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHh-------CCCCceEEEeEEEecC
Q 017200 218 FRGNNG----CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY-------VPAGTLTKTSIMLGCG 286 (375)
Q Consensus 218 ~~g~~e----~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~-------~p~Gl~tkt~imvGlG 286 (375)
+..+.+ ..+...++|+|.+--+ -- ..+.+++.++..-..+.+++. .+ .+.+|... |.-
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTS----TG----f~~~gAT~edv~lm~~~v~~~~~~~~~tg~-~vgVKaaG--GIr 235 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTS----TG----KVQINATPSSVEYIIKAIKEYIKNNPEKNN-KIGLKVSG--GIS 235 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECC----CS----CSSCCCCHHHHHHHHHHHHHHHHHCGGGTT-CCEEEEES--SCC
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeC----CC----CCCCCCCHHHHHHHHHHHHHhhcccccCCC-CceEEEeC--CCC
Confidence 112344 2345567888876421 00 001355555544333344322 22 24454443 333
Q ss_pred CCHHHHHHHHHHHHH-cCCcEEe
Q 017200 287 ETPDQVVSTMEKVRA-AGVDVMT 308 (375)
Q Consensus 287 ET~ee~~etl~~Lre-lgvd~v~ 308 (375)
|.+|.++.++.-.+ +|.++++
T Consensus 236 -t~e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 236 -DLNTASHYILLARRFLSSLACH 257 (281)
T ss_dssp -SHHHHHHHHHHHHHHTC-----
T ss_pred -CHHHHHHHHHHhhhhccccccc
Confidence 88888888877654 6666544
No 106
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=70.46 E-value=22 Score=33.48 Aligned_cols=92 Identities=13% Similarity=0.186 Sum_probs=60.9
Q ss_pred CCcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017200 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (375)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt 279 (375)
.++..-.++|-- .+ | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 14 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g----rv 82 (301)
T 1xky_A 14 GTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGES-------PTLTSEEKVALYRHVVSVVDK----RV 82 (301)
T ss_dssp CSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SS
T ss_pred CceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----Cc
Confidence 345555666621 11 3 445666778888764322112221 135679999999999886432 45
Q ss_pred eEEEec-CCCHHHHHHHHHHHHHcCCcEEee
Q 017200 280 SIMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 280 ~imvGl-GET~ee~~etl~~Lrelgvd~v~i 309 (375)
-+|+|. +.+-+|.++..+...++|+|.+-+
T Consensus 83 pViaGvg~~~t~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 83 PVIAGTGSNNTHASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEeCCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 689999 568899999999999999996554
No 107
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=70.20 E-value=16 Score=35.77 Aligned_cols=135 Identities=16% Similarity=0.195 Sum_probs=70.4
Q ss_pred cchH-HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEE-eecCCCCCChH-HHHHHHHcCccc
Q 017200 159 PDEP-TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE-ALVPDFRGNNG-CVREVAKSGLNV 235 (375)
Q Consensus 159 ~eEi-~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie-~l~pd~~g~~e-~l~~L~~aGldv 235 (375)
..++ ...|+..++.|+-.++ |-.+..+.+... +..+ |.+..|+..+- .+.++. ..+ ..+.+...|.|.
T Consensus 101 ~~~in~~lA~~a~~~G~~~~v--Gs~~~~le~~~~----~~~~-v~r~~P~~~~ianig~~~--~~e~~~~~ve~~~ada 171 (365)
T 3sr7_A 101 GKEVNEKLAQVADTCGLLFVT--GSYSTALKNPDD----TSYQ-VKKSRPHLLLATNIGLDK--PYQAGLQAVRDLQPLF 171 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCEEC------------------------------CCEEEEEETTS--CHHHHHHHHHHHCCSC
T ss_pred hhHHHHHHHHHHHHcCCCeec--ccccccccCccc----cceE-ehhhCCCCcEEEEeCCCC--CHHHHHHHHHhcCCCE
Confidence 3344 3467778888887665 222222222111 1222 22233665433 333333 333 445555778888
Q ss_pred ccccccchHHHHHHhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 236 FAHNIETVEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r-~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+..++....++ +.+. ..+++.|++.++.+++..+.-+.+| .+|+|-+.++ .+.+.+.|+|.|.++..
T Consensus 172 l~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK---~vg~g~s~e~----A~~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 172 LQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKKLQLPFILK---EVGFGMDVKT----IQTAIDLGVKTVDISGR 239 (365)
T ss_dssp EEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHHCCSCEEEE---ECSSCCCHHH----HHHHHHHTCCEEECCCB
T ss_pred EEEeccccccc---cCCCCCCcHHHHHHHHHHHHHhhCCCEEEE---ECCCCCCHHH----HHHHHHcCCCEEEEeCC
Confidence 87766554432 3322 3457789999999999753213345 2688888765 55677899999988543
No 108
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=70.15 E-value=57 Score=29.01 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHHhCCCcEEEeec---CCCC-
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALV---PDFR- 219 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G---------------~~~~~~lir~Ik~~~p~i~Ie~l~---pd~~- 219 (375)
.++..+.++++.+. ++.|.|.---.+...|+. .....+++++|++.. ++.|.+.. |.|.
T Consensus 18 ~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 18 KQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRA 95 (248)
T ss_dssp HHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhhhc
Confidence 36888999999888 998887732111122321 234578889998764 34455443 1110
Q ss_pred CChHHHHHHHHcCccccccc
Q 017200 220 GNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 220 g~~e~l~~L~~aGldv~~hn 239 (375)
+..+.++.+.++|+|.+...
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEC
Confidence 11578899999999987654
No 109
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=69.96 E-value=51 Score=31.11 Aligned_cols=94 Identities=10% Similarity=0.121 Sum_probs=63.2
Q ss_pred CCCcEEEeecCCC-------CCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017200 206 KPNMLIEALVPDF-------RGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (375)
Q Consensus 206 ~p~i~Ie~l~pd~-------~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tk 278 (375)
+.++..-.++|-. .+-...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 8 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----r 76 (311)
T 3h5d_A 8 ECKIITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAES-------PTLTHDEELELFAAVQKVVNG----R 76 (311)
T ss_dssp TCCEEEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHSCS----S
T ss_pred cCceEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 3456666666621 112556777888898864322122221 135689999999999986532 4
Q ss_pred EeEEEecC-CCHHHHHHHHHHHHHcCC-cEEeee
Q 017200 279 TSIMLGCG-ETPDQVVSTMEKVRAAGV-DVMTFG 310 (375)
Q Consensus 279 t~imvGlG-ET~ee~~etl~~Lrelgv-d~v~i~ 310 (375)
.-+|+|.| .+-+|.++..+...++|. |.+-+.
T Consensus 77 vpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 77 VPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp SCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred CcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc
Confidence 56899994 689999999999999985 865543
No 110
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=69.81 E-value=17 Score=34.03 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=51.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
.+++++.+.++++.+.|++.|.|- |.-.+. -...+.++++.|++..|++.|.+ .+.++.--......-.++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~--DT~G~~--~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~ 228 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLG--DTIGVG--TPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSV 228 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE--ETTSCC--CHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEec--CCCCCc--CHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 468999999999999999998877 211111 14678899999999888766654 3334311122223335689887
Q ss_pred ccc
Q 017200 236 FAH 238 (375)
Q Consensus 236 ~~h 238 (375)
+..
T Consensus 229 vd~ 231 (298)
T 2cw6_A 229 VDS 231 (298)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
No 111
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=69.70 E-value=27 Score=33.07 Aligned_cols=77 Identities=6% Similarity=0.031 Sum_probs=51.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQ-------FAITDDERDVLTRTILEHVAG----RVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEecCCchHHHHHHHHHHHH
Confidence 345666677787754222112221 134678888888888875422 45688888 468888889999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 101 ~~Gadavlv 109 (309)
T 3fkr_A 101 QLGAAMVMA 109 (309)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999886544
No 112
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=69.56 E-value=38 Score=32.02 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=72.8
Q ss_pred CCcEEEeecCC-CC-C--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017200 207 PNMLIEALVPD-FR-G--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (375)
Q Consensus 207 p~i~Ie~l~pd-~~-g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tk 278 (375)
.++..-.++|- -. + | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 13 ~Gv~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~~~~g----r 81 (314)
T 3d0c_A 13 STISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEF-------YALTIEEAKQVATRVTELVNG----R 81 (314)
T ss_dssp SSEEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----S
T ss_pred CceEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 45555556664 21 2 3 445666778888765322112221 135789999999999886432 4
Q ss_pred EeEEEecCCCHHHHHHHHHHHHHcCCcEEeee-cCC-CCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 279 TSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 279 t~imvGlGET~ee~~etl~~Lrelgvd~v~i~-qYl-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
.-+|+|.|.+-+|.++..+...++|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 82 vpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s----------~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 82 ATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYIT----------DAGAVEYYRNIIEALD 137 (314)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCC----------HHHHHHHHHHHHHHSS
T ss_pred CeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 45899995598999999999999999976553 222 121 1334667777777644
No 113
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=68.96 E-value=78 Score=30.59 Aligned_cols=156 Identities=16% Similarity=0.217 Sum_probs=86.5
Q ss_pred HHHHHHHhcC-CcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 164 NVAEAIASWG-LDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 164 ~~a~al~~~G-~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
+.|.++++.| +.-+. .++. .+...+.++++++. +.+.+.+..+-. ..+.++.+.++|+|.+..+..
T Consensus 60 ~lA~avA~~GGlgii~------~~~s---~e~~~~~I~~vk~~-~~~pvga~ig~~--~~e~a~~l~eaGad~I~ld~a- 126 (361)
T 3khj_A 60 LMAVGMARLGGIGIIH------KNMD---MESQVNEVLKVKNS-GGLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSA- 126 (361)
T ss_dssp HHHHHHHHTTCEEEEC------SSSC---HHHHHHHHHHHHHT-TCCCCEEEECTT--CHHHHHHHHHTTCSEEEECCS-
T ss_pred HHHHHHHHcCCCeEEe------cCCC---HHHHHHHHHHHHhc-cCceEEEEeCCC--HHHHHHHHHHcCcCeEEEeCC-
Confidence 6666666554 44442 1222 56677888888864 333333333211 368899999999998754311
Q ss_pred hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCC-C
Q 017200 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHM-P 321 (375)
Q Consensus 243 v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~-~ 321 (375)
....+.+++.++.+++.. ++ -+|+|-.-|.++ .+.+.+.|+|.|.++ ..|..... .
T Consensus 127 -----------~G~~~~~~~~i~~i~~~~--~~----~Vivg~v~t~e~----A~~l~~aGaD~I~VG--~~~Gs~~~tr 183 (361)
T 3khj_A 127 -----------HGHSLNIIRTLKEIKSKM--NI----DVIVGNVVTEEA----TKELIENGADGIKVG--IGPGSICTTR 183 (361)
T ss_dssp -----------CCSBHHHHHHHHHHHHHC--CC----EEEEEEECSHHH----HHHHHHTTCSEEEEC--SSCCTTCCHH
T ss_pred -----------CCCcHHHHHHHHHHHHhc--CC----cEEEccCCCHHH----HHHHHHcCcCEEEEe--cCCCcCCCcc
Confidence 112356678888888853 23 344455567665 456678999999885 34532111 0
Q ss_pred -ccc--cCCHHHHHHHHHHHHHhhhhhhccchhhhhhc
Q 017200 322 -VSE--YITPEAFERYRALGMEMGFRYVASGPMVRSSY 356 (375)
Q Consensus 322 -v~~--~v~pe~~~~l~~~a~~~gf~~~~sgp~vrssy 356 (375)
+.. ....+....+.+.+...+...+++| -++++-
T Consensus 184 ~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~G-GI~~~~ 220 (361)
T 3khj_A 184 IVAGVGVPQITAIEKCSSVASKFGIPIIADG-GIRYSG 220 (361)
T ss_dssp HHTCBCCCHHHHHHHHHHHHHHHTCCEEEES-CCCSHH
T ss_pred cccCCCCCcHHHHHHHHHHHhhcCCeEEEEC-CCCCHH
Confidence 001 1112333444444445566666776 555443
No 114
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=68.95 E-value=38 Score=31.74 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=55.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+..+
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGES-------ATLSVEEHTAVIEAVVKHVAK----RVPVIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCcCHHHHHHHHHHHH
Confidence 445666778888754322112221 135689999999999886432 45689999 469999999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
++|+|.+-+.
T Consensus 100 ~~Gadavlv~ 109 (297)
T 3flu_A 100 KAGADYTLSV 109 (297)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEC
Confidence 9999976553
No 115
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=68.92 E-value=9.1 Score=35.01 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=43.7
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
-++.+.++.+.++|+.+|++|+++++-.. .|.+ .++++.|.+..|++.|-+.-+ . ++.+.++.|++
T Consensus 151 ~~~~~~~~~~~~~g~~eil~t~Id~DGt~-~G~d--~~l~~~l~~~~~~ipviasGG-v-~~~~Dl~~l~~ 216 (243)
T 4gj1_A 151 KKLMEVLDFYSNKGLKHILCTDISKDGTM-QGVN--VRLYKLIHEIFPNICIQASGG-V-ASLKDLENLKG 216 (243)
T ss_dssp CBHHHHHHHHHTTTCCEEEEEETTC------CCC--HHHHHHHHHHCTTSEEEEESC-C-CSHHHHHHTTT
T ss_pred chHHHHHHHHhhcCCcEEEeeeecccccc-cCCC--HHHHHHHHHhcCCCCEEEEcC-C-CCHHHHHHHHc
Confidence 45667778888999999999999986442 2333 467888888777776654332 2 26677777743
No 116
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=68.91 E-value=37 Score=37.40 Aligned_cols=171 Identities=11% Similarity=0.108 Sum_probs=100.9
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCC--CCc------ccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHH
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD--LAD------QGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREV 228 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~d--l~d------~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L 228 (375)
++++..+.++.+.+.|++.|.|.-+-... ..+ ...+.+.++++.+++... -+.+. +.|+.....+..+.+
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK-~~~~~~~~~~~a~~~ 724 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAK-LTPNVTDIVSIARAA 724 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEE-ECSCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEE-eCCChHHHHHHHHHH
Confidence 57888888888888999999997652111 111 114667889999988742 13444 456653235667888
Q ss_pred HHcCcccccc-c---------ccch--HH-------HHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCH
Q 017200 229 AKSGLNVFAH-N---------IETV--EE-------LQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETP 289 (375)
Q Consensus 229 ~~aGldv~~h-n---------lEtv--~r-------l~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ 289 (375)
.++|+|.+.. | +|.. +. -..-+. ....+...++.+..+++..+. +++ |..|=-.|.
T Consensus 725 ~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~s-g~~~~~~~~~~v~~v~~~~~~-ipv---i~~GGI~s~ 799 (1025)
T 1gte_A 725 KEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVS-GTAIRPIALRAVTTIARALPG-FPI---LATGGIDSA 799 (1025)
T ss_dssp HHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEE-SGGGHHHHHHHHHHHHHHSTT-CCE---EEESSCCSH
T ss_pred HHcCCCEEEEeccccccccccccccccccccccccccCCCCC-cccchhHHHHHHHHHHHHcCC-CCE---EEecCcCCH
Confidence 8999997644 1 1100 00 000011 122345557888888876532 432 223334799
Q ss_pred HHHHHHHHHHHHcCCcEEeeecCC-C-CCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 290 DQVVSTMEKVRAAGVDVMTFGQYM-R-PSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 290 ee~~etl~~Lrelgvd~v~i~qYl-~-P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
+|..+.|. +|.+.|-++.-+ . | . .+..+-.+.|+.+....||..+
T Consensus 800 ~da~~~l~----~Ga~~v~vg~~~l~~~----~----~~~~~~~~~l~~~l~~~G~~~i 846 (1025)
T 1gte_A 800 ESGLQFLH----SGASVLQVCSAVQNQD----F----TVIQDYCTGLKALLYLKSIEEL 846 (1025)
T ss_dssp HHHHHHHH----TTCSEEEESHHHHTSC----T----THHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHH----cCCCEEEEeeccccCC----c----cHHHHHHHHHHHHHHHcCCCCH
Confidence 99988875 699999887421 1 2 1 1123345667777788888544
No 117
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=68.89 E-value=17 Score=33.83 Aligned_cols=67 Identities=19% Similarity=0.260 Sum_probs=50.4
Q ss_pred EeEEEec--CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 279 TSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 279 t~imvGl--GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
.-+|.|. .|+.+...+.++.++++|.+.|-+ |++.|-+....... ...+.++.+++++.++|...+.
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~-~~fkprts~~~~~g-~~~egl~~l~~~~~~~Gl~~~t 92 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRG-GAFKPRTSPYSFQG-YGEKALRWMREAADEYGLVTVT 92 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEEC-BSSCCCSSTTSCCC-CTHHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEE-EecccCCCcccccC-ccHHHHHHHHHHHHHcCCcEEE
Confidence 4577787 899999999999999999999987 67677221111111 2377899999999999987653
No 118
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=68.85 E-value=43 Score=31.20 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=63.6
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +|+|. +.+-+|.++..+..+
T Consensus 23 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~-g------ViaGvg~~~t~~ai~la~~A~ 88 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVNGTTGLG-------PALSKDEKRQNLNALYDVTH-K------LIFQVGSLNLNDVMELVKFSN 88 (288)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHTTTCS-C------EEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C------eEEeeCCCCHHHHHHHHHHHH
Confidence 345666777888764222112221 13568999999999988432 2 99999 558899999999999
Q ss_pred HcCCcEEeee-cCCCCCCCCCCccccCC-HHHHHHHHHHHHHhh
Q 017200 301 AAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (375)
Q Consensus 301 elgvd~v~i~-qYl~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (375)
++|+|.+-+. +|+-+ . .+ .+-+++++.+|...+
T Consensus 89 ~~Gadavlv~~P~y~~----~-----~s~~~l~~~f~~va~a~~ 123 (288)
T 2nuw_A 89 EMDILGVSSHSPYYFP----R-----LPEKFLAKYYEEIARISS 123 (288)
T ss_dssp TSCCSEEEECCCCSSC----S-----CCHHHHHHHHHHHHHHCC
T ss_pred hcCCCEEEEcCCcCCC----C-----CCHHHHHHHHHHHHHhcC
Confidence 9999976553 22211 0 12 334667777777644
No 119
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=68.29 E-value=40 Score=31.47 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=54.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+..+
T Consensus 26 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNGTTAES-------PTLTTDEKELILKTVIDLVDK----RVPVIAGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEeCCcccHHHHHHHHHHHH
Confidence 345666778888765332222221 134678999999998886432 45689999 578999999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
++|+|.+-+.
T Consensus 95 ~~Gadavlv~ 104 (292)
T 3daq_A 95 ALGADAIMLI 104 (292)
T ss_dssp HHTCSEEEEE
T ss_pred HcCCCEEEEC
Confidence 9999976554
No 120
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.18 E-value=45 Score=31.31 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=70.4
Q ss_pred CcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017200 208 NMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (375)
Q Consensus 208 ~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~ 280 (375)
++..-.++|-- .+ | ...++.+.+.|+|.+-.+=-|-+ . ..-+.+++.++++.+.+.... +.-
T Consensus 19 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE-----~--~~Ls~~Er~~v~~~~~~~~~g----rvp 87 (304)
T 3cpr_A 19 TVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGE-----S--PTTTAAEKLELLKAVREEVGD----RAK 87 (304)
T ss_dssp SEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTT-----T--TTSCHHHHHHHHHHHHHHHTT----TSE
T ss_pred ceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccC-----h--hhCCHHHHHHHHHHHHHHhCC----CCc
Confidence 45555566621 11 3 44566677788876422211222 0 245788999999999886432 345
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEeee-cCC-CCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 281 imvGl-GET~ee~~etl~~Lrelgvd~v~i~-qYl-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
+|+|. +.+-+|.++..+...++|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 88 viaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~----------~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 88 LIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPS----------QEGLLAHFGAIAAATE 142 (304)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhcC
Confidence 89999 5588999999999999999976553 332 221 1234566666666543
No 121
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=68.03 E-value=25 Score=33.44 Aligned_cols=78 Identities=14% Similarity=0.185 Sum_probs=55.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g----rvpViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGES-------PTLTHEEHKRIIELCVEQVAK----RVPVVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCc-------cccCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888865322122221 135689999999999886432 45689999 579999999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
++|+|.+-+.
T Consensus 115 ~~Gadavlv~ 124 (315)
T 3si9_A 115 KAGADAVLVV 124 (315)
T ss_dssp HTTCSEEEEE
T ss_pred hcCCCEEEEC
Confidence 9999976553
No 122
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=67.86 E-value=66 Score=33.17 Aligned_cols=76 Identities=9% Similarity=0.207 Sum_probs=47.9
Q ss_pred CcchHHHHHHHHHhcC-----CcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHHh----CCCcEEEeecCCCCCChH
Q 017200 158 DPDEPTNVAEAIASWG-----LDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKEL----KPNMLIEALVPDFRGNNG 223 (375)
Q Consensus 158 d~eEi~~~a~al~~~G-----~~eIvLTsg-dr~dl~d----~G~~~~~~lir~Ik~~----~p~i~Ie~l~pd~~g~~e 223 (375)
+.+++++.|+++.+.| .+-|-|=|. .|+.... .-...+.-+|+.|++. .+++.|. +-.+ ..+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpIS--IDT~--~a~ 322 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILS--IDTY--RSN 322 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEE--EECC--CHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEE--EeCC--cHH
Confidence 8899999999999999 888877663 3554221 1134566667777651 1233333 2223 566
Q ss_pred HHHHHHHcCccccc
Q 017200 224 CVREVAKSGLNVFA 237 (375)
Q Consensus 224 ~l~~L~~aGldv~~ 237 (375)
.++.-.++|.++++
T Consensus 323 VaeaAl~aGadIIN 336 (545)
T 2bmb_A 323 VAKEAIKVGVDIIN 336 (545)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 77777777777665
No 123
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=67.76 E-value=43 Score=31.27 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=64.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +|+|. +.+-+|.++..+..+
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~eEr~~v~~~~~~~~~-g------viaGvg~~~t~~ai~la~~A~ 88 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLG-------PSLSPEEKLENLKAVYDVTN-K------IIFQVGGLNLDDAIRLAKLSK 88 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHTTCS-C------EEEECCCSCHHHHHHHHHHGG
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHcC-C------EEEecCCCCHHHHHHHHHHHH
Confidence 445666777888754322112221 13568999999999998532 2 99999 558899999999999
Q ss_pred HcCCcEEeee-cCCCCCCCCCCccccCC-HHHHHHHHHHHHHhh
Q 017200 301 AAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (375)
Q Consensus 301 elgvd~v~i~-qYl~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (375)
++|+|.+-+. +|+-+ + .+ .+-+++++.+|...+
T Consensus 89 ~~Gadavlv~~P~y~~-----~----~s~~~l~~~f~~va~a~~ 123 (293)
T 1w3i_A 89 DFDIVGIASYAPYYYP-----R----MSEKHLVKYFKTLCEVSP 123 (293)
T ss_dssp GSCCSEEEEECCCSCS-----S----CCHHHHHHHHHHHHHHCS
T ss_pred hcCCCEEEEcCCCCCC-----C----CCHHHHHHHHHHHHhhCC
Confidence 9999976553 22211 0 12 334677788877644
No 124
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=67.50 E-value=28 Score=32.10 Aligned_cols=142 Identities=14% Similarity=0.171 Sum_probs=81.2
Q ss_pred CcchHHHHHHHHHh-cCCcEEEEEee--e---CC-CCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHH
Q 017200 158 DPDEPTNVAEAIAS-WGLDYVVITSV--D---RD-DLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVA 229 (375)
Q Consensus 158 d~eEi~~~a~al~~-~G~~eIvLTsg--d---r~-dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~ 229 (375)
++++..+.++.+.+ .|++.|.|.-. . +. .+. ...+.+.++++++++... -+.+. +.|+.....+.++.+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~~pv~vk-~~~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSKVPLYVK-LSPNVTDIVPIAKAVE 186 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCSSCEEEE-ECSCSSCSHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcCCCEEEE-ECCChHHHHHHHHHHH
Confidence 36788888888877 89997766432 1 10 110 114567899999988742 13333 3355432366788999
Q ss_pred HcCccccccc---------ccchH-HHH---HHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHH
Q 017200 230 KSGLNVFAHN---------IETVE-ELQ---SAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVST 295 (375)
Q Consensus 230 ~aGldv~~hn---------lEtv~-rl~---~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~ee~~et 295 (375)
++|+|.+... .++.. .+. .-+. ....+...++.++.+++.. ..-+|.+-|= |.+++.+.
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~-g~~~~~~~~~~i~~i~~~~------~ipvia~GGI~~~~d~~~~ 259 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLS-GPAIKPVALKLIHQVAQDV------DIPIIGMGGVANAQDVLEM 259 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEE-SGGGHHHHHHHHHHHHTTC------SSCEEECSSCCSHHHHHHH
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCccc-CccchHHHHHHHHHHHHhc------CCCEEEECCcCCHHHHHHH
Confidence 9999976431 11110 000 0011 1122334567787877732 2335554444 78888776
Q ss_pred HHHHHHcCCcEEeeecC
Q 017200 296 MEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 296 l~~Lrelgvd~v~i~qY 312 (375)
+. .|.|.|-++..
T Consensus 260 l~----~GAd~V~vg~~ 272 (311)
T 1ep3_A 260 YM----AGASAVAVGTA 272 (311)
T ss_dssp HH----HTCSEEEECTH
T ss_pred HH----cCCCEEEECHH
Confidence 64 68999988743
No 125
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=67.49 E-value=17 Score=34.43 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=52.7
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeee--CCCC-------Ccc---c---HHHHHHHHHHHHHhCC-CcEEEeecCCCCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVD--RDDL-------ADQ---G---SGHFAQTVRKLKELKP-NMLIEALVPDFRG 220 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgd--r~dl-------~d~---G---~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g 220 (375)
++.+++.+.|+.+.+.|++.|++++.. +.++ ..+ | .....+.++.|++..+ ++.|-+. +...
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~-GGI~- 299 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV-GGID- 299 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE-SSCC-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE-CCCC-
Confidence 445688999999999999999998763 2211 111 2 1234577888887653 4554432 3332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017200 221 NNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hn 239 (375)
+.+.+.++.++|+|.+..+
T Consensus 300 ~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 300 SVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp SHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHCCCCEEEee
Confidence 6677777778899987654
No 126
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=67.41 E-value=27 Score=32.89 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=72.6
Q ss_pred CCcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017200 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (375)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt 279 (375)
.++..-+++|-- .+ | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 13 ~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g----rv 81 (303)
T 2wkj_A 13 RGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEA-------FVQSLSEREQVLEIVAEEAKG----KI 81 (303)
T ss_dssp CSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TS
T ss_pred CceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccCh-------hhCCHHHHHHHHHHHHHHhCC----CC
Confidence 455666666621 11 3 445666778888765322112221 135688999999999886432 34
Q ss_pred eEEEecC-CCHHHHHHHHHHHHHcCCcEEeee-cCC-CCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 280 SIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 280 ~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~-qYl-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
-+|+|.| .+-+|.++..+...++|+|.+-+. +|+ .|+ ..+-+++++.+|....
T Consensus 82 pViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s----------~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS----------FEEHCDHYRAIIDSAD 137 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHHT
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 5899995 588999999999999999976553 332 221 1334667777777655
No 127
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=67.30 E-value=75 Score=29.00 Aligned_cols=18 Identities=11% Similarity=0.183 Sum_probs=10.1
Q ss_pred CCCHHHHHHHHHHHHHhC
Q 017200 254 RANFKQSLDVLMMAKDYV 271 (375)
Q Consensus 254 ~~s~~~~l~vl~~ak~~~ 271 (375)
+.+.+..++.++.+++..
T Consensus 75 G~~~~~~~~~v~~ir~~~ 92 (262)
T 2ekc_A 75 GIRFEDVLELSETLRKEF 92 (262)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhc
Confidence 455555666666666543
No 128
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=67.06 E-value=36 Score=32.62 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCCCCceE--EEeE--EEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 260 SLDVLMMAKDYVPAGTLT--KTSI--MLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 260 ~l~vl~~ak~~~p~Gl~t--kt~i--mvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.+++++.+++..+..+.+ +.+. ...-|.+.+|.++.++.|.+.|+|++++.
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 367888888876543322 2111 11116789999999999999999999986
No 129
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=66.92 E-value=22 Score=32.63 Aligned_cols=125 Identities=17% Similarity=0.194 Sum_probs=68.1
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHH---HHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc---
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVR---KLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN--- 234 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir---~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld--- 234 (375)
.+.+..+++.+.|+++|+++...- . .| .++-++.+ ..+..+|.+ ... +.+..+++.++.+.++=.+
T Consensus 61 si~~aL~~l~~~G~~~vvV~Pl~l---~-~G-~~~~di~~~v~~~~~~~~~i--~~~-~pl~~~~~~~~~l~~~l~~~~~ 132 (264)
T 2xwp_A 61 TPLQALQKLAAQGYQDVAIQSLHI---I-NG-DEYEKIVREVQLLRPLFTRL--TLG-VPLLSSHNDYVQLMQALRQQMP 132 (264)
T ss_dssp CHHHHHHHHHHHTCCEEEEEECCS---S-SS-HHHHHHHHHHHHHGGGCSEE--EEE-CCSSCSHHHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHhCCCCEEEEEeCcc---c-Cc-HHHHHHHHHHHHHHhhCCce--EEe-cCCCCCHHHHHHHHHHHHHhcc
Confidence 344555778899999999997643 1 22 23444444 444455644 333 3333355444444333111
Q ss_pred ---------cccccccchHHHHHHhcCCCCCHHHHHHHH-HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCC
Q 017200 235 ---------VFAHNIETVEELQSAVRDHRANFKQSLDVL-MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGV 304 (375)
Q Consensus 235 ---------v~~hnlEtv~rl~~~mr~r~~s~~~~l~vl-~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgv 304 (375)
.+.|+..- . .......+ +.+++. |. .+-+|+-|..-.+.+.++.|.+.|+
T Consensus 133 ~~~~~~~lvl~gHGs~~-----------~--~~~~~~~~a~~l~~~---~~----~v~~g~~e~~P~~~~~l~~l~~~G~ 192 (264)
T 2xwp_A 133 SLRQTEKVVFMGHGASH-----------H--AFAAYACLDHMMTAQ---RF----PARVGAVESYPEVDILIDSLRDEGV 192 (264)
T ss_dssp CCCTTEEEEEEECCCSS-----------G--GGHHHHHHHHHHHHT---TC----SEEEEESSSSSCHHHHHHHHHHHTC
T ss_pred ccCCCCeEEEEECCCCc-----------h--hhHHHHHHHHHHHhh---CC----CEEEEEeCCCCCHHHHHHHHHHCCC
Confidence 12333110 0 12222333 344442 31 4567775666678888999999999
Q ss_pred cEEeeecCC
Q 017200 305 DVMTFGQYM 313 (375)
Q Consensus 305 d~v~i~qYl 313 (375)
..|.+.+||
T Consensus 193 ~~v~v~P~~ 201 (264)
T 2xwp_A 193 TGVHLMPLM 201 (264)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEeee
Confidence 888887775
No 130
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=66.63 E-value=36 Score=32.33 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEA-------FLLTREERAQLIATARKAVGP----DFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHCT----TSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 345566667777754222112221 134678888888888875422 34578888 468888888888999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 104 ~~Gadavlv 112 (318)
T 3qfe_A 104 VAGANYVLV 112 (318)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999886544
No 131
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=66.44 E-value=32 Score=29.80 Aligned_cols=122 Identities=20% Similarity=0.282 Sum_probs=71.7
Q ss_pred HHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchH
Q 017200 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVE 244 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~ 244 (375)
.++.+.+.|++.|++-. .+. .+++.++++.+++..-.+.++++.|.- ..+.++.+.+.|+|.+..+. ...
T Consensus 69 ~~~~~~~~Gad~v~v~~-----~~~--~~~~~~~~~~~~~~g~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~-g~~ 138 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLG-----VTD--VLTIQSCIRAAKEAGKQVVVDMICVDD--LPARVRLLEEAGADMLAVHT-GTD 138 (211)
T ss_dssp HHHHHHHTTCSEEEEET-----TSC--HHHHHHHHHHHHHHTCEEEEECTTCSS--HHHHHHHHHHHTCCEEEEEC-CHH
T ss_pred HHHHHHhcCCCEEEEeC-----CCC--hhHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcC-CCc
Confidence 47888899999998742 221 345667777777753222333344431 24678889999999764321 111
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 245 ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 245 rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
- .... .. .++.++.+++..+. + -++++.|=+.+ .+..+.+.|.|.+-+|..+
T Consensus 139 -g-~~~~--~~----~~~~i~~l~~~~~~-~----~i~~~gGI~~~----~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 139 -Q-QAAG--RK----PIDDLITMLKVRRK-A----RIAVAGGISSQ----TVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp -H-HHTT--CC----SHHHHHHHHHHCSS-C----EEEEESSCCTT----THHHHHTTCCSEEEECHHH
T ss_pred -c-cccC--CC----CHHHHHHHHHHcCC-C----cEEEECCCCHH----HHHHHHHcCCCEEEECHHH
Confidence 0 0111 11 25666777775432 3 35666666643 4555668899999998553
No 132
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=66.37 E-value=56 Score=28.88 Aligned_cols=96 Identities=7% Similarity=0.001 Sum_probs=47.6
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lre 301 (375)
.+.++.++++|.+.+..... .+ +...+.++.-++.+.+.+ .|+.+.+. -....++.+.+.+.++...+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~-------~~-~~~~~~~~~~~~~~~l~~---~gl~i~~~-~~~~~~~~~~~~~~i~~A~~ 100 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDF-------HL-PLNSTDEQIRAFHDKCAA---HKVTGYAV-GPIYMKSEEEIDRAFDYAKR 100 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTT-------TS-CTTCCHHHHHHHHHHHHH---TTCEEEEE-EEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecc-------cC-CCCCCHHHHHHHHHHHHH---cCCeEEEE-eccccCCHHHHHHHHHHHHH
Confidence 55666667777665543321 01 112233333333334444 35544322 12223667777777777777
Q ss_pred cCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhh
Q 017200 302 AGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFR 344 (375)
Q Consensus 302 lgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~ 344 (375)
+|...|.+. |. .+.++++.++|.+.|..
T Consensus 101 lGa~~v~~~----p~-----------~~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 101 VGVKLIVGV----PN-----------YELLPYVDKKVKEYDFH 128 (257)
T ss_dssp HTCSEEEEE----EC-----------GGGHHHHHHHHHHHTCE
T ss_pred hCCCEEEec----CC-----------HHHHHHHHHHHHHcCCE
Confidence 777766653 31 23455566666665553
No 133
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=66.15 E-value=23 Score=33.93 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=60.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEE--eeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVIT--SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLT--sgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGl 233 (375)
-+++.+++.++++.+.|++.|.|- .|- .. ...+.++++.|++..|++.|.+ .+-++---......-.++|+
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~--~~----P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa 239 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLGV--LS----PEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGV 239 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTCC--CC----HHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCC--cC----HHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCC
Confidence 357889999999999999999874 221 11 3568899999999888776664 22232111222333446798
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHH
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMM 266 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ 266 (375)
+.+...+-..=+ +......++.+..|+.
T Consensus 240 ~~vd~tv~GlG~-----~aGN~~~E~lv~~L~~ 267 (337)
T 3ble_A 240 KGLHASINGLGE-----RAGNTPLEALVTTIHD 267 (337)
T ss_dssp SEEEEBGGGCSS-----TTCBCBHHHHHHHHHH
T ss_pred CEEEEecccccc-----cccchhHHHHHHHHHH
Confidence 877543321111 1234556666655544
No 134
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=65.76 E-value=85 Score=29.83 Aligned_cols=72 Identities=11% Similarity=0.189 Sum_probs=50.6
Q ss_pred chHHHHHHHHHhcCCcEEEEEee-eCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ec--CCCCCChHHHHHHHHcCcc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSV-DRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LV--PDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~--pd~~g~~e~l~~L~~aGld 234 (375)
+.+.+.|+...+.|.+.|.|-+. .+++-.+-..+.-.++|+.|++.. ++.|.+ =+ |++ +.+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~~--~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEEK--DAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHHH--HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCCC--CHHHHHHHHHhCCC
Confidence 78999999999999999999885 555443333566677888888764 444443 22 113 56778888888776
No 135
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=65.68 E-value=34 Score=32.13 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=53.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+..+
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEF-------AYLGTAQREAVVRATIEAAQR----RVPVVAGVASTSVADAVAQAKLYE 96 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTG-------GGCCHHHHHHHHHHHHHHHTT----SSCBEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCc-------cccCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888765332122221 135688899999988886432 34578898 578899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 97 ~~Gadavlv 105 (300)
T 3eb2_A 97 KLGADGILA 105 (300)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999986544
No 136
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=65.64 E-value=45 Score=31.01 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=53.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+..+
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---r~pviaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGES-------PTLSHEEHKKVIEKVVDVVN-G---RVQVIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 345666777888764322112221 13567899999999888543 2 35689999 458899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 93 ~~Gadavlv 101 (289)
T 2yxg_A 93 DVGADAVLS 101 (289)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996655
No 137
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=65.64 E-value=10 Score=36.88 Aligned_cols=57 Identities=18% Similarity=0.281 Sum_probs=44.0
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-cH------HHHHHHHHHHHHhCCCcEEE
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-GS------GHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-G~------~~~~~lir~Ik~~~p~i~Ie 212 (375)
.++.+.+++.++.+.++|++-|.|=|+..++..|. |. .-+...|+.||+.+|++.|-
T Consensus 69 r~sid~l~~~~~~~~~lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~Vi 132 (356)
T 3obk_A 69 RLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLL 132 (356)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEE
T ss_pred EECHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccccccCCCChHHHHHHHHHHHCCCCEEE
Confidence 37899999999999999999999999843333331 11 23567899999999997663
No 138
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=65.61 E-value=1.1e+02 Score=30.36 Aligned_cols=131 Identities=15% Similarity=0.197 Sum_probs=77.1
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++..+.++.+.+.|++.|.+.+... + .....+.|+.|++..|++.|-+ +.. .+.+..+.+.++|+|.+..+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G-~-----~~~~~e~i~~i~~~~p~~pvi~--g~~-~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG-H-----SRRVIETLEMIKADYPDLPVVA--GNV-ATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC-S-----SHHHHHHHHHHHHHCTTSCEEE--EEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC-c-----hHHHHHHHHHHHHHCCCceEEe--CCc-CCHHHHHHHHHcCCCEEEEc
Confidence 5667788899999999998855432 1 2456789999999887654422 211 16778899999999987654
Q ss_pred ccc--h--HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 240 IET--V--EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 240 lEt--v--~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
.+. . .+.+.-+ +...-..+..+..+.+. .++++ |. |=--+.+|+.+.+. +|.+.|.+|.-
T Consensus 307 ~~~G~~~~~~~~~~~---g~p~~~~l~~v~~~~~~--~~ipv----ia~GGI~~~~di~kala----~GAd~V~iGr~ 371 (494)
T 1vrd_A 307 VGPGSICTTRVVAGV---GVPQLTAVMECSEVARK--YDVPI----IADGGIRYSGDIVKALA----AGAESVMVGSI 371 (494)
T ss_dssp SSCSTTCHHHHHHCC---CCCHHHHHHHHHHHHHT--TTCCE----EEESCCCSHHHHHHHHH----TTCSEEEESHH
T ss_pred CCCCccccccccCCC---CccHHHHHHHHHHHHhh--cCCCE----EEECCcCCHHHHHHHHH----cCCCEEEECHH
Confidence 331 1 1212211 12222333333333321 12332 22 22258888887774 68998887644
No 139
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.54 E-value=40 Score=31.40 Aligned_cols=78 Identities=13% Similarity=0.136 Sum_probs=54.3
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+..+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEA-------STLSMEEHTQVIKEIIRVANK----RIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC----CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 445666777888754222112221 134689999999999886432 45689999 468999999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
++|+|.+-+.
T Consensus 94 ~~Gadavlv~ 103 (291)
T 3tak_A 94 DLGADAALLV 103 (291)
T ss_dssp HHTCSEEEEE
T ss_pred hcCCCEEEEc
Confidence 9999976553
No 140
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=65.49 E-value=48 Score=30.93 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=52.7
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---rvpviaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGES-------PTLTFEEHEKVIEFAVKRAA-G---RIKVIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEecCCCCHHHHHHHHHHHH
Confidence 345566677787754222112221 13567899999999888543 2 34589999 458899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 93 ~~Gadavlv 101 (294)
T 2ehh_A 93 EVGADGALV 101 (294)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996544
No 141
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=65.30 E-value=27 Score=32.91 Aligned_cols=92 Identities=12% Similarity=0.154 Sum_probs=62.1
Q ss_pred CcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017200 208 NMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (375)
Q Consensus 208 ~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~ 280 (375)
++..-.++|-- .+ | .+.++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-
T Consensus 18 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g----rvp 86 (304)
T 3l21_A 18 TLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGES-------PTTTDGEKIELLRAVLEAVGD----RAR 86 (304)
T ss_dssp SEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TSE
T ss_pred ceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC----CCe
Confidence 56666666621 11 3 445667778888754322112221 135689999999999886432 446
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 281 imvGl-GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+|+|. +.+-+|.++..+...++|+|.+-+.
T Consensus 87 viaGvg~~~t~~ai~la~~a~~~Gadavlv~ 117 (304)
T 3l21_A 87 VIAGAGTYDTAHSIRLAKACAAEGAHGLLVV 117 (304)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 89999 5899999999999999999976553
No 142
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=65.18 E-value=11 Score=36.51 Aligned_cols=79 Identities=11% Similarity=0.181 Sum_probs=52.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeC-CC--CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDR-DD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG- 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr-~d--l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG- 232 (375)
.+.++....++.+.+.|+++|.++++.. ++ .+. +..+..+.++.|++... +.|- ..+.+. +.+..+.+.+.|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~~-iPVi-~~GgI~-s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPW-GPAFMGPIAERVRREAK-LPVT-SAWGFG-TPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHHT-CCEE-ECSSTT-SHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCC-CcchhHHHHHHHHHHcC-CcEE-EeCCCC-CHHHHHHHHHCCC
Confidence 4567888999999999999999998642 11 111 12234566777776542 3332 233332 678888888888
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
+|.+..+
T Consensus 319 aD~V~iG 325 (363)
T 3l5l_A 319 LDLVSVG 325 (363)
T ss_dssp CSEEECC
T ss_pred ccEEEec
Confidence 8987765
No 143
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=65.12 E-value=22 Score=33.20 Aligned_cols=119 Identities=9% Similarity=0.022 Sum_probs=64.5
Q ss_pred CCcccHHHHHHHHHHHHHhC-CC--cEEEeecCCCCCChHHHHHHHHcCcc-cccccccchHHHHHHhcCCCCCHHHHHH
Q 017200 187 LADQGSGHFAQTVRKLKELK-PN--MLIEALVPDFRGNNGCVREVAKSGLN-VFAHNIETVEELQSAVRDHRANFKQSLD 262 (375)
Q Consensus 187 l~d~G~~~~~~lir~Ik~~~-p~--i~Ie~l~pd~~g~~e~l~~L~~aGld-v~~hnlEtv~rl~~~mr~r~~s~~~~l~ 262 (375)
+...|.+.+.+.++..++.. |+ +.+.+.-.+...-.+.++.+.++|.| .+..|+-. +.. +.-+.-+.+.+...+
T Consensus 71 ~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~-P~~-~g~~~~g~~~e~~~~ 148 (311)
T 1jub_A 71 LPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSC-PNV-PGEPQLAYDFEATEK 148 (311)
T ss_dssp CCBSCHHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCC-CCS-SSCCCGGGCHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccC-CCC-CCcccccCCHHHHHH
Confidence 33345566666665554332 12 22222211100014566777788888 77766531 111 000001236677788
Q ss_pred HHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 263 VLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 263 vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
+++.+++....-+.+|. ..+-+.+++.+..+.+.+.|+|.|.+.+
T Consensus 149 iv~~vr~~~~~Pv~vKi----~~~~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 149 LLKEVFTFFTKPLGVKL----PPYFDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp HHHHHTTTCCSCEEEEE----CCCCSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHHhcCCCEEEEE----CCCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 88888875311122332 2234888999999999999999987754
No 144
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=65.02 E-value=19 Score=31.96 Aligned_cols=79 Identities=13% Similarity=0.198 Sum_probs=51.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.|++...+.++++.+.|++.+.|.-.|..-.+.. ..-.+.+++|++..+ .+.+.+.+-+ ..+.++.+.++|+|.
T Consensus 20 ~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~--~~~~~~i~~l~~~~~~~~~v~l~vnd---~~~~v~~~~~~Gad~ 94 (230)
T 1rpx_A 20 ANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI--TIGPLVVDSLRPITDLPLDVHLMIVE---PDQRVPDFIKAGADI 94 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB--CCCHHHHHHHGGGCCSCEEEEEESSS---HHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc--ccCHHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCCCE
Confidence 5778889999999999999888865444322221 111467888887652 2344444322 134788899999998
Q ss_pred ccccc
Q 017200 236 FAHNI 240 (375)
Q Consensus 236 ~~hnl 240 (375)
+....
T Consensus 95 v~vh~ 99 (230)
T 1rpx_A 95 VSVHC 99 (230)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 86433
No 145
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=64.99 E-value=8.6 Score=36.41 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=46.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH-cCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGldv 235 (375)
.+.++..+.|+.+.+.|+++|+++++.+.+... |...+ ++++.|++ ++.|- ..+++. +.+.+..+.+ .|+|.
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~-~~~~~-~~i~~i~~---~ipVi-~~GgI~-s~~da~~~l~~~gad~ 209 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFT-GRAEW-KALSVLEK---RIPTF-VSGDIF-TPEDAKRALEESGCDG 209 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTS-SCCCG-GGGGGSCC---SSCEE-EESSCC-SHHHHHHHHHHHCCSE
T ss_pred CChHHHHHHHHHHHHhCCCEEEEcCCCccccCC-CCcCH-HHHHHHHc---CCeEE-EECCcC-CHHHHHHHHHcCCCCE
Confidence 344566688999999999999999886543211 11112 45556655 33332 234443 5566666665 79998
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 210 V~iG 213 (318)
T 1vhn_A 210 LLVA 213 (318)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7665
No 146
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=64.92 E-value=69 Score=27.72 Aligned_cols=111 Identities=21% Similarity=0.270 Sum_probs=67.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.+++++.+.++++.+.|++.|.|+-.+ ++ ..+.++.+++.++ .+.|..-. -. +.+.++...++|.|.
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~----~~-----~~~~i~~i~~~~~~~l~vg~g~-~~--~~~~i~~a~~~Gad~ 83 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS----PQ-----WEQSIPAIVDAYGDKALIGAGT-VL--KPEQVDALARMGCQL 83 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS----TT-----HHHHHHHHHHHHTTTSEEEEEC-CC--SHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC----hh-----HHHHHHHHHHhCCCCeEEEecc-cc--CHHHHHHHHHcCCCE
Confidence 578899999999999999999886322 11 2456666766543 24442211 11 567899999999998
Q ss_pred ccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+..+ . .. .++++.+++. |+. +++| -.|.+|.. ...+.|+|++.+
T Consensus 84 V~~~--~------------~~----~~~~~~~~~~---g~~----~~~g-~~t~~e~~----~a~~~G~d~v~v 127 (212)
T 2v82_A 84 IVTP--N------------IH----SEVIRRAVGY---GMT----VCPG-CATATEAF----TALEAGAQALKI 127 (212)
T ss_dssp EECS--S------------CC----HHHHHHHHHT---TCE----EECE-ECSHHHHH----HHHHTTCSEEEE
T ss_pred EEeC--C------------CC----HHHHHHHHHc---CCC----EEee-cCCHHHHH----HHHHCCCCEEEE
Confidence 7421 1 01 2344555552 433 2445 35666653 234678888876
No 147
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=64.59 E-value=11 Score=36.37 Aligned_cols=50 Identities=18% Similarity=0.188 Sum_probs=34.6
Q ss_pred HHHHHHHHHhC--CCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 261 LDVLMMAKDYV--PAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 261 l~vl~~ak~~~--p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+++++.+++.. |-++++..+-...-|.+.+|..+.++.|.+.|+|++++.
T Consensus 198 ~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 198 GEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp HHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 67788888765 222233322111126788999999999999999999985
No 148
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=64.40 E-value=58 Score=26.67 Aligned_cols=75 Identities=23% Similarity=0.437 Sum_probs=49.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeee------------------CCCCCcccHHHHHHHHHHHHHhCCCcEEEeec-CCC
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVD------------------RDDLADQGSGHFAQTVRKLKELKPNMLIEALV-PDF 218 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgd------------------r~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~-pd~ 218 (375)
||+-+.++++.++..|++-++|-|-. -....| .+.|-+-|+.|-+.+|++.+-++. .|
T Consensus 11 dpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtved--kedfrenireiwerypqldvvvivttd- 87 (162)
T 2l82_A 11 DPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVED--KEDFRENIREIWERYPQLDVVVIVTTD- 87 (162)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCS--HHHHHHHHHHHHHHCTTCCEEEEEECC-
T ss_pred CHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeecc--HHHHHHHHHHHHHhCCCCcEEEEEecC-
Confidence 45656677888999999988887642 001122 567888899998999987655433 22
Q ss_pred CCC----hHHHHHHHHcCccccc
Q 017200 219 RGN----NGCVREVAKSGLNVFA 237 (375)
Q Consensus 219 ~g~----~e~l~~L~~aGldv~~ 237 (375)
+ .+.+++.++-|+.++-
T Consensus 88 --dkewikdfieeakergvevfv 108 (162)
T 2l82_A 88 --DKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp --CHHHHHHHHHHHHHTTCEEEE
T ss_pred --cHHHHHHHHHHHHhcCcEEEE
Confidence 3 3445666777777653
No 149
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=64.13 E-value=18 Score=34.86 Aligned_cols=77 Identities=14% Similarity=-0.014 Sum_probs=50.9
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccH------HHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGS------GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~------~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
.++..+.++.+.+.|++.|++++..+.... .|. ....++++.|++..|++.|-+ .+++. +.+.+..+.+ |
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~-~g~~~~~~~~~~~~~i~~ik~~~~~iPVia-nGgI~-s~eda~~~l~-G 218 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVHARSALLAL-STKANREIPPLRHDWVHRLKGDFPQLTFVT-NGGIR-SLEEALFHLK-R 218 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEE-ESSCC-SHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCchhccc-CcccccCCCcccHHHHHHHHHhCCCCeEEE-ECCcC-CHHHHHHHHh-C
Confidence 457888999999999999999986542100 000 012467888888776666543 34433 6777777777 8
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
+|.+..+
T Consensus 219 aD~V~iG 225 (350)
T 3b0p_A 219 VDGVMLG 225 (350)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
Confidence 9977665
No 150
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=63.80 E-value=52 Score=30.68 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=64.6
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEG-------CSVGSRERQAILSSFIAAGIA----PSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHTTCC----GGGEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCccHHHHHHHHHHHH
Confidence 445666777888764322112220 135688999999999985432 44589999 558899999999999
Q ss_pred HcCCcEEeee-cCC-C-CCCCCCCccccCCHHHHHHHHHHHHHh
Q 017200 301 AAGVDVMTFG-QYM-R-PSKRHMPVSEYITPEAFERYRALGMEM 341 (375)
Q Consensus 301 elgvd~v~i~-qYl-~-P~~~~~~v~~~v~pe~~~~l~~~a~~~ 341 (375)
++|.|.+-+. +|+ . |+ ..+-+++++.+|...
T Consensus 96 ~~Gadavlv~~P~y~~~~s----------~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 96 NAGARNILLAPPSYFKNVS----------DDGLFAWFSAVFSKI 129 (294)
T ss_dssp HTTCSEEEECCCCSSCSCC----------HHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEcCCcCCCCCC----------HHHHHHHHHHHHHhc
Confidence 9999976553 222 1 11 123466777777765
No 151
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=63.71 E-value=56 Score=30.42 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=53.8
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGES-------PTLSKSEHEQVVEITIKTANG----RVPVIAGAGSNSTAEAIAFVRHAQ 92 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCccHHHHHHHHHHHH
Confidence 445666778888765322112221 135688999999999885432 34589999 558899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 93 ~~Gadavlv 101 (292)
T 2vc6_A 93 NAGADGVLI 101 (292)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999996544
No 152
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=63.61 E-value=91 Score=28.62 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCC-c-ccHHHHHHHHHHHHHhCCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLA-D-QGSGHFAQTVRKLKELKPN 208 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d-~G~~~~~~lir~Ik~~~p~ 208 (375)
.+.+|+++.++.+...|++-|-+ |-|+- + ...+.+.+.+..+++..++
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vEl----R~D~l~~~~~~~~v~~~l~~lr~~~~~ 78 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEW----RVDFFENVENIKEVKEVLYELRSYIHD 78 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEE----EGGGCTTTTCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHhhcCCCEEEE----eeccccccCCHHHHHHHHHHHHHhcCC
Confidence 46789999999998888876543 33332 1 1256788888888876543
No 153
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=63.48 E-value=1e+02 Score=29.25 Aligned_cols=184 Identities=18% Similarity=0.191 Sum_probs=0.0
Q ss_pred HHHHHhcCCcEEEEEeee-------CCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCC----hHHHHHHHHcCc
Q 017200 166 AEAIASWGLDYVVITSVD-------RDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGN----NGCVREVAKSGL 233 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgd-------r~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~----~e~l~~L~~aGl 233 (375)
|+.+.+.|++-|.+||-- .+|..--..+.++..++.|.+..+ ++.|-+=.|.-.|+ .+.++.+.++|+
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 117 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGV 117 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCC
Q ss_pred ccccccccchH-HHHHHhcCCCC-----CHHHHHHHHHHHHHh----CCCCceE--EEeEEEecCCCHHHHHHHHHHHHH
Q 017200 234 NVFAHNIETVE-ELQSAVRDHRA-----NFKQSLDVLMMAKDY----VPAGTLT--KTSIMLGCGETPDQVVSTMEKVRA 301 (375)
Q Consensus 234 dv~~hnlEtv~-rl~~~mr~r~~-----s~~~~l~vl~~ak~~----~p~Gl~t--kt~imvGlGET~ee~~etl~~Lre 301 (375)
..+.. + .+.++-|+... +.++..+.|+.+++. .++ +.+ .|+-..+.| .+|.++-++...+
T Consensus 118 agv~i-----EDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d-~~I~ARTDa~~~~g--ldeAi~Ra~ay~e 189 (307)
T 3lye_A 118 AGAHL-----EDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSD-FVLIARTDALQSLG--YEECIERLRAARD 189 (307)
T ss_dssp CEEEE-----CCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCC-CEEEEEECCHHHHC--HHHHHHHHHHHHH
T ss_pred eEEEE-----cCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCC-eEEEEechhhhccC--HHHHHHHHHHHHH
Q ss_pred cCCcEEeeecCCCCCCCC-------------CCc---------cccCCHHHHHHHHHHHHHhhhhhhccch-hhhhhcch
Q 017200 302 AGVDVMTFGQYMRPSKRH-------------MPV---------SEYITPEAFERYRALGMEMGFRYVASGP-MVRSSYKV 358 (375)
Q Consensus 302 lgvd~v~i~qYl~P~~~~-------------~~v---------~~~v~pe~~~~l~~~a~~~gf~~~~sgp-~vrssy~a 358 (375)
.|.|.|-+ |..+. .|+ ...++.+++..+ ||..+.-|. +.|+.|+|
T Consensus 190 AGAD~ifi-----~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~l-------Gv~~v~~~~~~~raa~~a 257 (307)
T 3lye_A 190 EGADVGLL-----EGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAM-------GFRIMIFSFATLAPAYAA 257 (307)
T ss_dssp TTCSEEEE-----CCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHH-------TCSEEEEETTTHHHHHHH
T ss_pred CCCCEEEe-----cCCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHc-------CCeEEEEChHHHHHHHHH
Q ss_pred hHHHHHHHHhh
Q 017200 359 VGWCYYLIFNY 369 (375)
Q Consensus 359 ~~~~~~~~~~~ 369 (375)
-+..++.|.+.
T Consensus 258 ~~~~~~~l~~~ 268 (307)
T 3lye_A 258 IRETLVRLRDH 268 (307)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
No 154
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.46 E-value=44 Score=31.32 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... .+.-+|+|. +.+-+|.++..+..+
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---~rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGES-------ATLTHEEHRTCIEIAVETCKG---TKVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888865332222221 134688999999999886432 135689999 469999999999999
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
++|+|.+-+.
T Consensus 101 ~~Gadavlv~ 110 (301)
T 3m5v_A 101 EHGADGILSV 110 (301)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 9999966553
No 155
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=63.46 E-value=57 Score=30.39 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=53.9
Q ss_pred hHHHHHHHH-cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHH
Q 017200 222 NGCVREVAK-SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKV 299 (375)
Q Consensus 222 ~e~l~~L~~-aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~L 299 (375)
...++.+.+ .|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+..
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---rvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGEN-------FMLSTEEKKEIFRIAKDEAK-D---QIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCccccch-------hhCCHHHHHHHHHHHHHHhC-C---CCeEEEecCCCCHHHHHHHHHHH
Confidence 445666777 888764322112221 13568899999999988643 2 44589999 55889999999999
Q ss_pred HHcCCcEEee
Q 017200 300 RAAGVDVMTF 309 (375)
Q Consensus 300 relgvd~v~i 309 (375)
.++|+|.+-+
T Consensus 96 ~~~Gadavlv 105 (293)
T 1f6k_A 96 TELGYDCLSA 105 (293)
T ss_dssp HHHTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 9999996655
No 156
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.31 E-value=18 Score=34.69 Aligned_cols=80 Identities=9% Similarity=0.050 Sum_probs=52.9
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeee-CCC--CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVD-RDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgd-r~d--l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
..+.++....++.+.+.|+++|.++.+. ..+ .+. +..+..+.++.|++.. ++.|- ..+.+. +.+..+.+.+.|
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi-~~Ggi~-t~e~a~~~l~~G 310 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL-APGFQVPFADAVRKRV-GLRTG-AVGLIT-TPEQAETLLQAG 310 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC-CTTTTHHHHHHHHHHH-CCEEE-ECSSCC-CHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC-CccccHHHHHHHHHHc-CceEE-EECCCC-CHHHHHHHHHCC
Confidence 3678899999999999999999999542 221 111 1123456777787754 23332 223332 678888888888
Q ss_pred -ccccccc
Q 017200 233 -LNVFAHN 239 (375)
Q Consensus 233 -ldv~~hn 239 (375)
+|.+..+
T Consensus 311 ~aD~V~iG 318 (349)
T 3hgj_A 311 SADLVLLG 318 (349)
T ss_dssp SCSEEEES
T ss_pred CceEEEec
Confidence 8887765
No 157
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=63.30 E-value=1.3 Score=41.46 Aligned_cols=18 Identities=33% Similarity=0.460 Sum_probs=11.9
Q ss_pred HHHHHHHHH-Hhhhhhhcc
Q 017200 331 FERYRALGM-EMGFRYVAS 348 (375)
Q Consensus 331 ~~~l~~~a~-~~gf~~~~s 348 (375)
.++++.++. .-||.|+.|
T Consensus 154 ~eRi~~ia~~a~gFiY~Vs 172 (252)
T 3tha_A 154 KERVKKLVKHAKGFIYLLA 172 (252)
T ss_dssp HHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHhCCCeEEEEe
Confidence 355665554 458999877
No 158
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=63.15 E-value=10 Score=34.48 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=55.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHHhC-CCc--EEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELK-PNM--LIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d--~G~~~~~~lir~Ik~~~-p~i--~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..|...+.+.++.+.+.|.+.+++==.|..-.|. .| .++++.|++.+ |++ .+++.+-+ ....++.+.+
T Consensus 13 ~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G----~~~v~~ir~~~~~~~~~dvhLmv~~---p~~~i~~~~~ 85 (228)
T 3ovp_A 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG----HPVVESLRKQLGQDPFFDMHMMVSK---PEQWVKPMAV 85 (228)
T ss_dssp TSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC----HHHHHHHHHHHCSSSCEEEEEECSC---GGGGHHHHHH
T ss_pred eCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC----HHHHHHHHHhhCCCCcEEEEEEeCC---HHHHHHHHHH
Confidence 4688889999999999999988876555433222 23 45788888774 443 33444322 1346889999
Q ss_pred cCcccccccccch
Q 017200 231 SGLNVFAHNIETV 243 (375)
Q Consensus 231 aGldv~~hnlEtv 243 (375)
+|+|.+....|+.
T Consensus 86 aGad~itvH~Ea~ 98 (228)
T 3ovp_A 86 AGANQYTFHLEAT 98 (228)
T ss_dssp HTCSEEEEEGGGC
T ss_pred cCCCEEEEccCCc
Confidence 9999998877754
No 159
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=63.15 E-value=57 Score=33.43 Aligned_cols=114 Identities=18% Similarity=0.247 Sum_probs=63.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..++.+.++++.+.|++.|.|=- .+.. ...+.++.++|++......+.+++-|. ++...+.|+|.+..
T Consensus 24 ~~~l~~~ve~al~~Gv~~vQlR~---K~~~---~~~~~~~a~~l~~l~~~~~v~liIND~------~dlA~~~gAdGVHL 91 (540)
T 3nl6_A 24 GKTLYGQVEAGLQNGVTLVQIRE---KDAD---TKFFIEEALQIKELCHAHNVPLIINDR------IDVAMAIGADGIHV 91 (540)
T ss_dssp TCCHHHHHHHHHHTTCSEEEECC---SSSC---TTHHHHHHHHHHHHHHHTTCCEEECSC------SHHHHHTTCSEEEE
T ss_pred cchHHHHHHHHHHCCCCEEEEec---CCCC---HHHHHHHHHHHHHHHHhcCCEEEEeCc------HHHHHHcCCCEEEE
Confidence 35678888899999998887631 2222 234555555555332111122344332 44556678887765
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcC---CcEEeeecCC
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAG---VDVMTFGQYM 313 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelg---vd~v~i~qYl 313 (375)
+.+-.+ +..+++..+.+ .++|. --|.+|..+ ..+.| +|+|.+++.+
T Consensus 92 gq~dl~-------------------~~~ar~~lg~~------~iiG~S~ht~eea~~----A~~~G~~~aDYv~~Gpvf 141 (540)
T 3nl6_A 92 GQDDMP-------------------IPMIRKLVGPD------MVIGWSVGFPEEVDE----LSKMGPDMVDYIGVGTLF 141 (540)
T ss_dssp CTTSSC-------------------HHHHHHHHCTT------SEEEEEECSHHHHHH----HHHTCC--CCEEEESCCS
T ss_pred ChhhcC-------------------HHHHHHHhCCC------CEEEEECCCHHHHHH----HHHcCCCCCCEEEEcCCC
Confidence 543211 11222221122 34555 458777654 34678 9999999876
No 160
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=63.05 E-value=75 Score=28.66 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=43.0
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCC-----------CcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDL-----------ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl-----------~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
..++.++..|+.+|.|.-.|.-+. .|-|......+.+.+++.+|.+.|+....++ +.+.+..+.+ +
T Consensus 45 ~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~--~~~~~~~~~~-~ 121 (249)
T 1jw9_B 45 AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL--DDAELAALIA-E 121 (249)
T ss_dssp HHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC--CHHHHHHHHH-T
T ss_pred HHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC--CHhHHHHHHh-C
Confidence 457788899999988765443111 1223334455667788888999888776555 4454554433 3
Q ss_pred cccc
Q 017200 233 LNVF 236 (375)
Q Consensus 233 ldv~ 236 (375)
.|++
T Consensus 122 ~DvV 125 (249)
T 1jw9_B 122 HDLV 125 (249)
T ss_dssp SSEE
T ss_pred CCEE
Confidence 4544
No 161
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=63.01 E-value=21 Score=34.24 Aligned_cols=79 Identities=6% Similarity=0.069 Sum_probs=53.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEe-ecCCCCCChHHHHHHHHcCcc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEA-LVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~-l~pd~~g~~e~l~~L~~aGld 234 (375)
-+++.+.+.++++.+.|+..|.|.....--. ...+.++|+.|++..| ++.|.+ .+-++---......-.++|++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMS----MNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCC----HHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccC----HHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 3578999999999999999998875543322 3568899999999885 677764 222221112334445578988
Q ss_pred ccccc
Q 017200 235 VFAHN 239 (375)
Q Consensus 235 v~~hn 239 (375)
.+...
T Consensus 222 ~vd~t 226 (345)
T 1nvm_A 222 RVDAS 226 (345)
T ss_dssp EEEEB
T ss_pred EEEec
Confidence 76543
No 162
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=62.89 E-value=51 Score=30.85 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=54.3
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGES-------PTLTEEEHKRVVALVAEQAQG----RVPVIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhCC----CCeEEEccCCCCHHHHHHHHHHHH
Confidence 445666778888765322112221 135688999999999885432 35689999 558899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 93 ~~Gadavlv 101 (297)
T 2rfg_A 93 QAGADAVLC 101 (297)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999997655
No 163
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=62.56 E-value=27 Score=33.72 Aligned_cols=51 Identities=16% Similarity=0.354 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCCCce--EEEeE--EEecC-CCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 261 LDVLMMAKDYVPAGTL--TKTSI--MLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 261 l~vl~~ak~~~p~Gl~--tkt~i--mvGlG-ET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
+++++.+++..+..+. ++.+. ...-| .+.+|.++.++.|.+.|+|++++..
T Consensus 212 ~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 212 LETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 6788888887653332 22222 11114 6788999999999999999998863
No 164
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=62.15 E-value=11 Score=36.55 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=43.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHHhCCCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d-~G------~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++.+.+++.++.+.++|++-|.|=|+..+.+.| .| -.-+...|+.||+.+|++.|-
T Consensus 63 ~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vi 125 (337)
T 1w5q_A 63 LSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGII 125 (337)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 688999999999999999999999993222222 11 124678999999999997663
No 165
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=61.73 E-value=77 Score=27.20 Aligned_cols=132 Identities=13% Similarity=0.129 Sum_probs=76.4
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHHhCCCcEEEeecCCC-CCChHHHHHHHHcCcccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF-RGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~----~~~~lir~Ik~~~p~i~Ie~l~pd~-~g~~e~l~~L~~aGldv~~h 238 (375)
+.++++.+.| .+|-.=|-.++++.....+ .+....+.|++.. +.....+-|.+ .-+...++.+++.|...+.-
T Consensus 47 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~~~~~G~~~v~w 124 (195)
T 2cc0_A 47 SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAG-GGTPKLFRPPYGETNATLRSVEAKYGLTEVIW 124 (195)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTT-SCCCSEECCGGGCCCHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCcCHHHHHHHHHCCCeEEEe
Confidence 3456677788 5665555556655432222 3334444455443 22333333322 12677888899999888777
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
++++.+-. ..+.++..+.+ .+.. .| .|++-+ + .|.+.+-+.+..|++.|..++++.+.+
T Consensus 125 ~~d~~Dw~-------~~~~~~i~~~~---~~~~-~g-----~IiL~Hd~~~~t~~al~~ii~~l~~~Gy~~v~l~~~~ 186 (195)
T 2cc0_A 125 DVDSQDWN-------NASTDAIVQAV---SRLG-NG-----QVILMHDWPANTLAAIPRIAQTLAGKGLCSGMISPQT 186 (195)
T ss_dssp SEECCGGG-------TCCHHHHHHHH---HTCC-TT-----CEEEEESSCHHHHHHHHHHHHHHHHTTEEECEECTTT
T ss_pred ccCCCccC-------CCCHHHHHHHH---hCcC-cC-----eEEEECCCchhHHHHHHHHHHHHHHCCCEEEEeCccc
Confidence 77765521 12445444433 3322 23 356656 3 366777788899999999999997554
No 166
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=61.35 E-value=25 Score=32.53 Aligned_cols=134 Identities=11% Similarity=0.237 Sum_probs=79.7
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCC-ccc------HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQG------SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d~G------~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (375)
.+|+++.|..++ =..|+|+=-.+..+. ++| .+++.++++.+++. +++|.+++-. +.++++.-++.
T Consensus 76 t~emi~ia~~~k---P~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~--GIrVSLFIDp---d~~qi~aA~~~ 147 (243)
T 1m5w_A 76 TEEMLAIAVETK---PHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADA--GIQVSLFIDA---DEEQIKAAAEV 147 (243)
T ss_dssp SHHHHHHHHHHC---CSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHT--TCEEEEEECS---CHHHHHHHHHT
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHC--CCEEEEEeCC---CHHHHHHHHHh
Confidence 467887776653 367877754444442 222 56788888899875 7999987632 68999999999
Q ss_pred CcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEeee
Q 017200 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFG 310 (375)
Q Consensus 232 Gldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel-gvd~v~i~ 310 (375)
|.|++...-...-..+.... +...++...+..+.|++ .|+.+.+ |+|=|-+.+... ..+ ++.-++||
T Consensus 148 GA~~IELhTG~Ya~a~~~~~-~~~el~~i~~aa~~A~~---lGL~VnA----GHgL~y~Nv~~i----a~ip~i~ElnIG 215 (243)
T 1m5w_A 148 GAPFIEIHTGCYADAKTDAE-QAQELARIAKAATFAAS---LGLKVNA----GHGLTYHNVKAI----AAIPEMHELNIG 215 (243)
T ss_dssp TCSEEEEECHHHHHCCSHHH-HHHHHHHHHHHHHHHHH---TTCEEEE----ESSCCTTTHHHH----HTCTTEEEEEEC
T ss_pred CcCEEEEechhhhcCCCchh-HHHHHHHHHHHHHHHHH---cCCEEec----CCCCCHHHHHHH----hhCCCCeEEccC
Confidence 99987543111101110000 01234455556666666 4776654 677776655433 233 35667777
Q ss_pred cC
Q 017200 311 QY 312 (375)
Q Consensus 311 qY 312 (375)
.+
T Consensus 216 Ha 217 (243)
T 1m5w_A 216 HA 217 (243)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 167
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=61.11 E-value=24 Score=32.86 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=70.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
-+++++.+.++.+.+.|++.|.|---..- . -...+.++++.|++..|.+.+.+ ..-++.--......-.++|++.
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~-~---~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~ 227 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGR-G---TPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRV 227 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSC-C---CHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCC-c---CHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCE
Confidence 46899999999999999999988721111 1 14568899999998877544432 2213211133344455789887
Q ss_pred ccccccch-HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017200 236 FAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (375)
Q Consensus 236 ~~hnlEtv-~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lre 301 (375)
+...+-.. +--|..-+......++.+..|+ + .|+.+ + -..+.+.+..+.+.+
T Consensus 228 vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~---~---~g~~~--~------id~~~l~~~~~~~~~ 280 (295)
T 1ydn_A 228 FDASVGGLGGCPFAPGAKGNVDTVAVVEMLH---E---MGFET--G------LDLDRLRSAGLFTQA 280 (295)
T ss_dssp EEEBTTCCSCBTTBTTSCCBCBHHHHHHHHH---H---TTCBC--C------CCHHHHHHHHHHHHH
T ss_pred EEeccccCCCCCCCCCCcCChhHHHHHHHHH---h---cCCCC--C------cCHHHHHHHHHHHHH
Confidence 76643221 0001111112445565555544 2 24332 2 255666666666554
No 168
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=61.06 E-value=12 Score=34.02 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=50.5
Q ss_pred CCcchHHHHHHHHHhcC-CcEEEEEeeeCCCCCccc-HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 157 PDPDEPTNVAEAIASWG-LDYVVITSVDRDDLADQG-SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G-~~eIvLTsgdr~dl~d~G-~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
+.|..+++.++.+.+.| +++|.+-+++.. ..... ...-.+-|+++++..+++.|++ .+.. +.+.+..+.++|+|
T Consensus 121 lnp~tp~~~~~~~l~~g~~D~VlvmsV~pG-f~gq~f~~~~l~ki~~lr~~~~~~~I~V-dGGI--~~~ti~~~~~aGAd 196 (227)
T 1tqx_A 121 IKPKTDVQKLVPILDTNLINTVLVMTVEPG-FGGQSFMHDMMGKVSFLRKKYKNLNIQV-DGGL--NIETTEISASHGAN 196 (227)
T ss_dssp ECTTSCGGGGHHHHTTTCCSEEEEESSCTT-CSSCCCCGGGHHHHHHHHHHCTTCEEEE-ESSC--CHHHHHHHHHHTCC
T ss_pred eCCCCcHHHHHHHhhcCCcCEEEEeeeccC-CCCcccchHHHHHHHHHHHhccCCeEEE-ECCC--CHHHHHHHHHcCCC
Confidence 34455556666777776 899999888632 11110 1223566777777666666653 3334 78899999999999
Q ss_pred cccc
Q 017200 235 VFAH 238 (375)
Q Consensus 235 v~~h 238 (375)
++--
T Consensus 197 ~~V~ 200 (227)
T 1tqx_A 197 IIVA 200 (227)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 169
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.70 E-value=50 Score=31.55 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=53.7
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~g----rvpViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIY-------MYLTREERRRAIEAAATILRG----RRTLMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCCCHHHHHHHHHHHH
Confidence 345666777888765322112221 135688999999999886432 34589999 458899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 127 ~~Gadavlv 135 (332)
T 2r8w_A 127 AAGADALLL 135 (332)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999997655
No 170
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=60.59 E-value=49 Score=29.95 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-------------c--HHHHHHHHHHHHHhCCCcEEEeec---CCCCC
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-------------G--SGHFAQTVRKLKELKPNMLIEALV---PDFRG 220 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-------------G--~~~~~~lir~Ik~~~p~i~Ie~l~---pd~~g 220 (375)
.++..+.++++.+.|++.|.|-.--.+.+-|+ | .....+++++|++.. ++.+.++. |.+..
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~ 109 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLLSYYKPIMFR 109 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEECCSHHHHSC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecCcHHHHH
Confidence 47888999999999999998843222212221 1 345678888888763 44444332 11111
Q ss_pred ChHHHHHHHHcCccccc
Q 017200 221 NNGCVREVAKSGLNVFA 237 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~ 237 (375)
.++.++++|+|.+-
T Consensus 110 ---~~~~a~~aGadgv~ 123 (262)
T 1rd5_A 110 ---SLAKMKEAGVHGLI 123 (262)
T ss_dssp ---CTHHHHHTTCCEEE
T ss_pred ---HHHHHHHcCCCEEE
Confidence 13448889998543
No 171
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.36 E-value=50 Score=31.73 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=53.9
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~-g---rvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEF-------SQLGAEERKAIARFAIDHVD-R---RVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSCEEEECCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEecCCCCHHHHHHHHHHHH
Confidence 445666778888765322112221 13568899999999988643 2 45689999 478899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 124 ~~Gadavlv 132 (343)
T 2v9d_A 124 QAGADGIVV 132 (343)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996544
No 172
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=60.31 E-value=51 Score=31.01 Aligned_cols=76 Identities=13% Similarity=0.154 Sum_probs=53.0
Q ss_pred HHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHH
Q 017200 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRA 301 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lre 301 (375)
..++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... ..-+|+|. +.+-+|.++..+..++
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEF-------PFLTSSERLEVVSRVRQAMPK----NRLLLAGSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHTSCT----TSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHcCC----CCcEEEecCCCCHHHHHHHHHHHHH
Confidence 34556667787754322112221 135688999999999986432 44688999 4699999999999999
Q ss_pred cCCcEEee
Q 017200 302 AGVDVMTF 309 (375)
Q Consensus 302 lgvd~v~i 309 (375)
+|+|.+-+
T Consensus 108 ~Gadavlv 115 (307)
T 3s5o_A 108 VGADAAMV 115 (307)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 99997655
No 173
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=59.92 E-value=24 Score=32.85 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=47.1
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++++++.+.|+++|.+-. .+.+.+.+.++.++..+|++.|++.- .. +.+.+..+.++|+|.+..+
T Consensus 193 ee~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~~~~i~AsG-GI--~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDN--------LSVLETKEIAAYRDAHYPFVLLEASG-NI--SLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHHHHHTCSEEEEET--------CCHHHHHHHHHHHHHHCTTCEEEEES-SC--CTTTHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCcEEEEEC-CC--CHHHHHHHHHcCCcEEEEc
Confidence 334445567999998743 12566777788887778888888654 33 6788999999999988654
No 174
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=59.32 E-value=1.2e+02 Score=28.62 Aligned_cols=168 Identities=10% Similarity=0.105 Sum_probs=100.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.++|.+.++++.+.|+.-|++... +...++...+. .++.|...++.-.|. ....+...+
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~P~------------~V~~a~~~L~~-s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVRPD------------YVSRAVQYLQG-TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQ 137 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHTTT-SSCEEEEEESTTTSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHcCC-CCCeEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 56789999999999999999987521 22333222111 257777766532231 224555667
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|.|-+..-+ + + ..+. ..+|+..++-|+.+++..+. ..+|.=+..|+ -|++++....+...++|.|+|.-.
T Consensus 138 ~GAdEIDmVI---N-i-g~lk--~g~~~~v~~eI~~V~~a~~~-~~lKVIlEt~~-Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 138 NGASELDMVM---N-Y-PWLS--EKRYTDVFQDIRAVRLAAKD-AILKVILETSQ-LTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp TTCSEEEEEC---C-H-HHHH--TTCHHHHHHHHHHHHHHTTT-SEEEEECCGGG-CCHHHHHHHHHHHHHTTCSEEECC
T ss_pred cCCCEEEEEe---e-h-hhhc--CCcHHHHHHHHHHHHHHhcC-CCceEEEECCC-CCHHHHHHHHHHHHHcCCCEEEcC
Confidence 7887655321 1 1 1122 35788888888888887644 23333333333 378999999999999999999764
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHh--hhhhhccchhhhhh
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEM--GFRYVASGPMVRSS 355 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~--gf~~~~sgp~vrss 355 (375)
.=+.+ .-.+++..+.++++.... .....+|| -+|+.
T Consensus 209 TGf~~--------~GAT~edv~lmr~~v~~~g~~v~VKAAG-GIrt~ 246 (288)
T 3oa3_A 209 TGFNG--------PGASIENVSLMSAVCDSLQSETRVKASG-GIRTI 246 (288)
T ss_dssp CSSSS--------CCCCHHHHHHHHHHHHHSSSCCEEEEES-SCCSH
T ss_pred CCCCC--------CCCCHHHHHHHHHHHHHhCCCceEEEeC-CCCCH
Confidence 21211 113566677777665422 23445777 67754
No 175
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=59.22 E-value=60 Score=29.69 Aligned_cols=48 Identities=8% Similarity=0.159 Sum_probs=26.4
Q ss_pred hHHHHHHHHcCcccccccccc---------hH-HHHHHhcCCCCCHHHHHHHHHHHHHh
Q 017200 222 NGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQSLDVLMMAKDY 270 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEt---------v~-rl~~~mr~r~~s~~~~l~vl~~ak~~ 270 (375)
.+.++.|.++|+|.+..++-. +. ...+.+. .+.+.+..+++++.+++.
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~-~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFA-AGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhc
Confidence 345666666777766555411 11 1122233 356677777777777775
No 176
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=58.90 E-value=24 Score=34.75 Aligned_cols=121 Identities=13% Similarity=0.196 Sum_probs=72.3
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~d----l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
|.+...+.|+++++.|++.|.+..=.... +...|.+.+ ..++.+++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 226 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEY-GLGV--ISEIV--TPADIEVALDY-V 226 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECC--SGGGHHHHTTT-C
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHc-CCEE--EEecC--CHHHHHHHHhh-C
Confidence 67888999999999999988776543111 111234444 3444444433 2332 33223 66778888776 8
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCc
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVD 305 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd 305 (375)
|++..+--. |. + ...++.+.+.... +.+++++ .=|.+|+...++.+++.|..
T Consensus 227 d~lkIgs~~-------~~----n----~~LL~~~a~~gkP-Vilk~G~----~~t~~e~~~Ave~i~~~Gn~ 278 (385)
T 3nvt_A 227 DVIQIGARN-------MQ----N----FELLKAAGRVDKP-ILLKRGL----SATIEEFIGAAEYIMSQGNG 278 (385)
T ss_dssp SEEEECGGG-------TT----C----HHHHHHHHTSSSC-EEEECCT----TCCHHHHHHHHHHHHTTTCC
T ss_pred CEEEECccc-------cc----C----HHHHHHHHccCCc-EEEecCC----CCCHHHHHHHHHHHHHcCCC
Confidence 888765211 11 1 2455555553222 4456555 34899999999999988764
No 177
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=58.45 E-value=67 Score=30.12 Aligned_cols=92 Identities=14% Similarity=0.189 Sum_probs=60.6
Q ss_pred CCcEEEeecCCCCC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017200 207 PNMLIEALVPDFRG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (375)
Q Consensus 207 p~i~Ie~l~pd~~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~ 280 (375)
.++..-.++|--.+ | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-
T Consensus 15 ~Gv~~a~vTPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~~~~g----rvp 83 (306)
T 1o5k_A 15 RGVGTAIVTPFKNGELDLESYERLVRYQLENGVNALIVLGTTGES-------PTVNEDEREKLVSRTLEIVDG----KIP 83 (306)
T ss_dssp SEEEEECCCCEETTEECHHHHHHHHHHHHHTTCCEEEESSGGGTG-------GGCCHHHHHHHHHHHHHHHTT----SSC
T ss_pred CCeeeeeecCcCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC----CCe
Confidence 44555556662122 3 445666778888764322112221 135788999999999886432 356
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEee
Q 017200 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 281 imvGl-GET~ee~~etl~~Lrelgvd~v~i 309 (375)
+|+|. +.+-+|.++..+..+++|+|.+-+
T Consensus 84 ViaGvg~~st~~ai~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 84 VIVGAGTNSTEKTLKLVKQAEKLGANGVLV 113 (306)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEcCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 89999 558899999999999999996544
No 178
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=58.33 E-value=1.1e+02 Score=27.83 Aligned_cols=116 Identities=17% Similarity=0.207 Sum_probs=60.4
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCC------CCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRD------DLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~------dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
+++.+.++++.+.|++-|.|=--+.+ .+. ...+.++.+.|++....-.+.+++-|. ++...+.|+
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~---~~~~~~~a~~l~~l~~~~~~~liInd~------~~lA~~~gA 113 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQ---ARDELAACEILADAAHRYGALFAVNDR------ADIARAAGA 113 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCC---HHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTC
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCccccccCCC---HHHHHHHHHHHHHHHHhhCCEEEEeCH------HHHHHHhCC
Confidence 45778888888999988876311100 022 344555555555432111222343232 334556688
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
|.+..+.+-.+ ...+++..+.+ .++|. --|.+|.... .+.|+|+|.+++.
T Consensus 114 dGVHLg~~dl~-------------------~~~~r~~~~~~------~~iG~S~ht~~Ea~~A----~~~GaDyI~vgpv 164 (243)
T 3o63_A 114 DVLHLGQRDLP-------------------VNVARQILAPD------TLIGRSTHDPDQVAAA----AAGDADYFCVGPC 164 (243)
T ss_dssp SEEEECTTSSC-------------------HHHHHHHSCTT------CEEEEEECSHHHHHHH----HHSSCSEEEECCS
T ss_pred CEEEecCCcCC-------------------HHHHHHhhCCC------CEEEEeCCCHHHHHHH----hhCCCCEEEEcCc
Confidence 87655432211 11223322222 34444 4677775443 3589999999875
Q ss_pred C
Q 017200 313 M 313 (375)
Q Consensus 313 l 313 (375)
+
T Consensus 165 f 165 (243)
T 3o63_A 165 W 165 (243)
T ss_dssp S
T ss_pred c
Confidence 5
No 179
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.29 E-value=1.3e+02 Score=28.87 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=74.5
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
.+.++.+.+.|++.|+|.....+ ...+.+.|+.+++.+ ++.|-+ ... .+.+.++.+.++|+|.+-.+.+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~------~~~~~~~i~~i~~~~-~~~Viv--g~v-~t~e~A~~l~~aGaD~I~VG~~~ 176 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH------SLNIIRTLKEIKSKM-NIDVIV--GNV-VTEEATKELIENGADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS------BHHHHHHHHHHHHHC-CCEEEE--EEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC------cHHHHHHHHHHHHhc-CCcEEE--ccC-CCHHHHHHHHHcCcCEEEEecCC
Confidence 67788888999999988544321 345788999999876 343322 111 16788999999999987654221
Q ss_pred -hHHHHHHhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 243 -VEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 243 -v~rl~~~mr~r-~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
.-...+.+.+- ..++.-..++.+.+++. +++ +|..-| -+.+|+.+.+. +|.+.|-++..+
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~---~iP----VIA~GGI~~~~di~kala----~GAd~V~vGs~~ 239 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASKF---GIP----IIADGGIRYSGDIGKALA----VGASSVMIGSIL 239 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHHH---TCC----EEEESCCCSHHHHHHHHH----HTCSEEEESTTT
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhhc---CCe----EEEECCCCCHHHHHHHHH----cCCCEEEEChhh
Confidence 00001112111 12232222332223331 233 344333 47888777664 599998888665
No 180
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=58.11 E-value=95 Score=27.05 Aligned_cols=68 Identities=10% Similarity=0.035 Sum_probs=41.3
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
..+++.+ ++++.+.|++.|++- ..++. ...+.++++.|++..-... ++++- +.++.+.++|+|.+.
T Consensus 28 ~~~~l~~-~~~~~~~G~~~v~lr---~~~~~---~~~~~~~~~~l~~~~~~~~-~l~v~------~~~~~a~~~gad~v~ 93 (221)
T 1yad_A 28 PVEELAR-IIITIQNEVDFIHIR---ERSKS---AADILKLLDLIFEGGIDKR-KLVMN------GRVDIALFSTIHRVQ 93 (221)
T ss_dssp CHHHHHH-HHHHHGGGCSEEEEC---CTTSC---HHHHHHHHHHHHHTTCCGG-GEEEE------SCHHHHHTTTCCEEE
T ss_pred CcchHHH-HHHHHHCCCCEEEEc---cCCCC---HHHHHHHHHHHHHhcCcCC-eEEEe------ChHHHHHHcCCCEEE
Confidence 3455544 667778899987662 22332 5667888888876421111 22321 246778889999876
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 94 l~ 95 (221)
T 1yad_A 94 LP 95 (221)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 181
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=58.06 E-value=1.1e+02 Score=28.00 Aligned_cols=73 Identities=12% Similarity=0.006 Sum_probs=51.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc--Ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (375)
.+++++++.|++..+.|.+.|-|-+|..+ .. ..+.+..++..|++.. ++.|.+=+ + +.+.++.-.++ |.+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-v~--~~ee~~rvv~~i~~~~-~~pisIDT--~--~~~v~~aAl~a~~Ga~ 93 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAV-QD--KVSAMEWLVEVTQEVS-NLTLCLDS--T--NIKAIEAGLKKCKNRA 93 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC-----C--HHHHHHHHHHHHHTTC-CSEEEEEC--S--CHHHHHHHHHHCSSCE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCC-CC--hHHHHHHHHHHHHHhC-CCeEEEeC--C--CHHHHHHHHhhCCCCC
Confidence 68899999999999999999998775321 11 2466777888887642 44444322 2 67888887777 888
Q ss_pred ccc
Q 017200 235 VFA 237 (375)
Q Consensus 235 v~~ 237 (375)
.++
T Consensus 94 iIN 96 (262)
T 1f6y_A 94 MIN 96 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 182
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=57.82 E-value=25 Score=33.34 Aligned_cols=65 Identities=18% Similarity=0.199 Sum_probs=47.2
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++++++.+.|+++|.|-. .+.+.+.+.++.++..+|++.|++. +.. +.+.+..+.++|+|.+..+
T Consensus 208 ee~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~~~~I~AS-GGI--t~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDN--------FKPEELHPTATVLKAQFPSVAVEAS-GGI--TLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHHHHTTCSEEEEES--------CCHHHHHHHHHHHHHHCTTSEEEEE-SSC--CTTTHHHHCCTTCCEEECT
T ss_pred HHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCeeEEEE-CCC--CHHHHHHHHHCCCCEEEEC
Confidence 334445567999988743 2256677778888777888988865 344 6788999999999988653
No 183
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=57.73 E-value=1.1e+02 Score=27.91 Aligned_cols=167 Identities=14% Similarity=0.114 Sum_probs=97.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.+++.+.++++.+.|+.-|++... +....+...+ ..++.|.+.++.-.|. ....+...+
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~------------~v~~a~~~L~-~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 106 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPT------------WVPLCAELLK-GTGVKVCTVIGFPLGATPSEVKAYETKVAVE 106 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHHT-TSSCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHhC-CCCCeEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 46788999999999999999986421 2333333222 2357787766432332 223444555
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|.|-+..-+.. ..+. ..+|+..++-++.+++..+. ..+|.=+=.|+ -|++++....+...++|.|+|.-.
T Consensus 107 ~GAdEIDmViNi-----g~lk--~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 107 QGAEEVDMVINI-----GMVK--AKKYDDVEKDVKAVVDASGK-ALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp TTCSEEEEECCH-----HHHH--TTCHHHHHHHHHHHHHHHTT-SEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred cCCCEEEEEeeh-----HHhc--cccHHHHHHHHHHHHHHhcC-CceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECC
Confidence 677754432211 1122 35688888888888876543 44444111132 389999999999999999999875
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccchhhhhh
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (375)
.=+.+. + .+++..+.+++.. .-.....+|| -+|+.
T Consensus 178 TGf~~g--g------At~~dv~lmr~~v-g~~v~VKasG-GIrt~ 212 (239)
T 3ngj_A 178 TGFGTH--G------ATPEDVKLMKDTV-GDKALVKAAG-GIRTF 212 (239)
T ss_dssp CSSSSC--C------CCHHHHHHHHHHH-GGGSEEEEES-SCCSH
T ss_pred CCCCCC--C------CCHHHHHHHHHhh-CCCceEEEeC-CCCCH
Confidence 212121 1 2455556565543 2223445777 67754
No 184
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=57.47 E-value=15 Score=35.35 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=41.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHHhCCCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d-~G------~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++.+.+++.++.+.++|++-|.|=|+......| .| -.-+...|+.||+.+|++.|-
T Consensus 56 ~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vi 118 (330)
T 1pv8_A 56 YGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVA 118 (330)
T ss_dssp ECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTTSEEE
T ss_pred ecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 789999999999999999999999984221122 11 124678999999999997663
No 185
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.99 E-value=19 Score=32.25 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+.+.++.+.+.|++.|++|+.+++.-. .|.+ .+++++|++.. ++.|-+. +... +.+.+..+.++|+|.+-.
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~--~~~~~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIAS-GGAG-KMEHFLEAFLAGADAALA 223 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSC-SCCC--HHHHHHHGGGC-CSCEEEE-SCCC-SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCC-CCCC--HHHHHHHHHhc-CCCEEEE-CCCC-CHHHHHHHHHcCChHHHH
Confidence 5677788888999999999988764322 2222 46777777654 3433332 2331 568888898999887654
No 186
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=56.92 E-value=1.1e+02 Score=27.44 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=67.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcE-EEeec---CC---CCC-ChHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNML-IEALV---PD---FRG-NNGCVREV 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~-Ie~l~---pd---~~g-~~e~l~~L 228 (375)
.+++.+.+.|++..+.|..-|...+ .+.|++|++.. ++. +...- ++ +.. ..+.++.+
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~--------------~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~ 97 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIEG--------------IENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDAL 97 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES--------------HHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCcEEEECC--------------HHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHH
Confidence 4678899999999999998876521 23577887765 232 21111 11 111 34678899
Q ss_pred HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEe
Q 017200 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~ 308 (375)
.++|+|.+... +... .+ . +..-+.++.+++ .|+.+-.++ -|.++. +.+.+.|+|+|.
T Consensus 98 ~~aGad~I~l~--~~~~----~~--p---~~l~~~i~~~~~---~g~~v~~~v-----~t~eea----~~a~~~Gad~Ig 154 (229)
T 3q58_A 98 AQAGADIIAFD--ASFR----SR--P---VDIDSLLTRIRL---HGLLAMADC-----STVNEG----ISCHQKGIEFIG 154 (229)
T ss_dssp HHHTCSEEEEE--CCSS----CC--S---SCHHHHHHHHHH---TTCEEEEEC-----SSHHHH----HHHHHTTCSEEE
T ss_pred HHcCCCEEEEC--cccc----CC--h---HHHHHHHHHHHH---CCCEEEEec-----CCHHHH----HHHHhCCCCEEE
Confidence 99999987532 1100 11 1 223345555566 245443332 355554 455688999985
Q ss_pred e
Q 017200 309 F 309 (375)
Q Consensus 309 i 309 (375)
+
T Consensus 155 ~ 155 (229)
T 3q58_A 155 T 155 (229)
T ss_dssp C
T ss_pred e
Confidence 4
No 187
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=56.81 E-value=1.3e+02 Score=29.64 Aligned_cols=131 Identities=20% Similarity=0.296 Sum_probs=79.2
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
....+.++.+.+.|++.|++.+... + ...+.+.++.|++..|.+.+- .+.. .+.+....+.++|+|.+..+
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a~g----~--~~~~~~~i~~l~~~~p~~pvi--~G~v-~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTAHG----H--SAGVLRKIAEIRAHFPNRTLI--AGNI-ATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCSCT----T--CHHHHHHHHHHHHHCSSSCEE--EEEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred hhHHHHHHHHHHcCCCeEEEeeecC----c--chhHHHHHHHHHHHCCCCcEe--CCCc-cCHHHHHHHHHcCCCEEEEC
Confidence 3456778888899999999887321 1 345678899999888655442 2222 26788889999999987444
Q ss_pred c-----cchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 240 I-----ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 240 l-----Etv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
. -+. +.+.-+. ..+.+...++...+++ .+++ +|. |=--+.+|+...+ .+|.+.+-+|..+
T Consensus 303 ~g~g~~~~t-r~~~~~~--~p~~~~l~~~~~~~~~---~~ip----via~GGi~~~~di~kal----~~GA~~v~vG~~~ 368 (491)
T 1zfj_A 303 IGPGSICTT-RVVAGVG--VPQVTAIYDAAAVARE---YGKT----IIADGGIKYSGDIVKAL----AAGGNAVMLGSMF 368 (491)
T ss_dssp SSCCTTBCH-HHHTCCC--CCHHHHHHHHHHHHHH---TTCE----EEEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred ccCCcceEE-eeecCCC--CCcHHHHHHHHHHHhh---cCCC----EEeeCCCCCHHHHHHHH----HcCCcceeeCHHh
Confidence 2 222 2221111 2233333344443333 1233 333 2236888888776 4699999887654
No 188
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=56.81 E-value=29 Score=35.01 Aligned_cols=156 Identities=16% Similarity=0.253 Sum_probs=90.2
Q ss_pred CCcchHHHHHHHHH-hcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCC-CCCChHHHHHHHHcC-c
Q 017200 157 PDPDEPTNVAEAIA-SWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD-FRGNNGCVREVAKSG-L 233 (375)
Q Consensus 157 ld~eEi~~~a~al~-~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd-~~g~~e~l~~L~~aG-l 233 (375)
++++|.++..+.+. +.+ |.+...| ++....+.+..+-+.+.. .+.| .-.| +..+.+.++...+.+ .
T Consensus 281 ~t~~Elid~y~~lle~yp-----Iv~IEDP-l~~dD~eg~a~Lt~~lg~---~iqI--vGDDl~vTn~~~i~~~Ie~~a~ 349 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYP-----IISVEDP-FDQDDFASFSAFTKDVGE---KTQV--IGDDILVTNILRIEKALKDKAC 349 (452)
T ss_dssp ECHHHHHHHHHHHHHHSC-----EEEEECC-SCTTCHHHHHHHHHHHTT---TSEE--EESTTTTTCHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHhhhC-----ceEEecC-CChhhHHHHHHHHHhhCC---CeEE--EeCccccCCHHHHHHHHhcCCC
Confidence 78899988887754 444 3333322 111114445555554421 2333 2223 233567777666544 2
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
|.+.. ++. .-.+..+.+++++.|++ .|+ .+|+|+ |||++.++..|. -.++...|..|
T Consensus 350 n~IlI----------Kvn-QIGgITEalka~~lA~~---~G~----~vmvshrSGETeD~~iAdLa--Vgl~~gqIKtG- 408 (452)
T 3otr_A 350 NCLLL----------KVN-QIGSVTEAIEACLLAQK---SGW----GVQVSHRSGETEDSFIADLV--VGLRCGQIKSG- 408 (452)
T ss_dssp SEEEE----------CHH-HHCCHHHHHHHHHHHHH---TTC----EEEEECCSSCCSCCHHHHHH--HHTTCCEEECC-
T ss_pred CEEEe----------ecc-ccccHHHHHHHHHHHHH---cCC----eEEEeCCCCCCchhHHHHHH--HHcCCCccccC-
Confidence 33322 122 23478999999999999 564 578998 999999986653 35566666665
Q ss_pred CCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccchhhh
Q 017200 312 YMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVR 353 (375)
Q Consensus 312 Yl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vr 353 (375)
-|.. . + .-.++++|..+..++|-.....|.-.|
T Consensus 409 --ap~r-s----E--R~aKyNqLlrIeeelg~~a~~~g~~~~ 441 (452)
T 3otr_A 409 --SPCR-S----E--RLCKYNQLMRIEESLGADCVYAGESFR 441 (452)
T ss_dssp --CSCS-H----H--HHHHHHHHHHHHHHHGGGEEECGGGTT
T ss_pred --CCcc-h----h--HHHHHHHHHHHHHHhCccceecccccC
Confidence 1211 0 1 123577888888899976666664333
No 189
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=56.74 E-value=1.2e+02 Score=27.78 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=30.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-cHHHHHHHHHHHHHhC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-GSGHFAQTVRKLKELK 206 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-G~~~~~~lir~Ik~~~ 206 (375)
.+.+|++..++.+...|.+-|-+=- |.+.+. ..+.+.+.+..|++..
T Consensus 29 ~~~~e~~~~~~~~~~~~~D~vElRv---D~l~~~~~~~~v~~~l~~lr~~~ 76 (257)
T 2yr1_A 29 EDDRKVLREAEEVCRKQPDLLEWRA---DFFRAIDDQERVLATANGLRNIA 76 (257)
T ss_dssp SSHHHHHHHHHHHHHSCCSEEEEEG---GGCTTTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEEe---ecccccCcHHHHHHHHHHHHHhc
Confidence 4578888888888888887665432 222211 1456777888888764
No 190
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=56.57 E-value=20 Score=33.91 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=49.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
.+++.+++.++++.+.|++.|.|-=-..--. ...+.++++.|++..|++.|.+ ..-|+.--......-.++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~ 229 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAAN----PAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITV 229 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCC----HHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcC----HHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 4688999999999999999888761111111 4568899999998887666653 2222210122233334678887
Q ss_pred ccc
Q 017200 236 FAH 238 (375)
Q Consensus 236 ~~h 238 (375)
+..
T Consensus 230 vd~ 232 (307)
T 1ydo_A 230 FDG 232 (307)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 191
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=56.37 E-value=32 Score=35.46 Aligned_cols=77 Identities=9% Similarity=0.080 Sum_probs=49.7
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
+++..++.++++.+.|++.|.|-=-..--. ...+.++|+.|++..| ++.|++ .+-++.--......-.++|++.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~----P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~ 248 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAALLK----PQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDV 248 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCC----HHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCcC----HHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCE
Confidence 689999999999999999888741111111 3568899999998876 666654 2222211122334445789887
Q ss_pred ccc
Q 017200 236 FAH 238 (375)
Q Consensus 236 ~~h 238 (375)
+..
T Consensus 249 VD~ 251 (539)
T 1rqb_A 249 VDT 251 (539)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 192
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=56.32 E-value=1.3e+02 Score=27.98 Aligned_cols=135 Identities=12% Similarity=0.136 Sum_probs=71.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-cHHHHHHHHHHHHHhCCCcE--EEeec----CCCCCChH----HH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-GSGHFAQTVRKLKELKPNML--IEALV----PDFRGNNG----CV 225 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-G~~~~~~lir~Ik~~~p~i~--Ie~l~----pd~~g~~e----~l 225 (375)
.+.+|+...++.+...|++-|-+-- |.+.+. ..+.+.+.++.|++..+++. +.+=+ +.+.++.+ .+
T Consensus 49 ~~~~e~~~~~~~~~~~gaD~VElRv---D~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll 125 (276)
T 3o1n_A 49 KTITDVKSEALAYREADFDILEWRV---DHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLN 125 (276)
T ss_dssp SSHHHHHHHHHHHTTSCCSEEEEEG---GGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEEe---ccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHH
Confidence 4578888888888878887665431 222221 13568888888887653332 22111 12333333 34
Q ss_pred HHHHHcC-cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCce-EEEeEEEecCCCHHHHHHHHHHHHHcC
Q 017200 226 REVAKSG-LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL-TKTSIMLGCGETPDQVVSTMEKVRAAG 303 (375)
Q Consensus 226 ~~L~~aG-ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~-tkt~imvGlGET~ee~~etl~~Lrelg 303 (375)
+.+.+.| +|.+..-+...++ ..-++++.+++ .|.. +-|.--+.-.-+.+++.+.+..+.++|
T Consensus 126 ~~~l~~g~~dyIDvEl~~~~~-------------~~~~l~~~a~~---~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~G 189 (276)
T 3o1n_A 126 RAAVDSGLVDMIDLELFTGDD-------------EVKATVGYAHQ---HNVAVIMSNHDFHKTPAAEEIVQRLRKMQELG 189 (276)
T ss_dssp HHHHHHTCCSEEEEEGGGCHH-------------HHHHHHHHHHH---TTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCEEEEECcCCHH-------------HHHHHHHHHHh---CCCEEEEEeecCCCCcCHHHHHHHHHHHHHcC
Confidence 4445556 5655432222222 22244455555 2322 222221111234567888888888888
Q ss_pred CcEEeee
Q 017200 304 VDVMTFG 310 (375)
Q Consensus 304 vd~v~i~ 310 (375)
.|++.|.
T Consensus 190 aDIvKia 196 (276)
T 3o1n_A 190 ADIPKIA 196 (276)
T ss_dssp CSEEEEE
T ss_pred CCEEEEE
Confidence 8887775
No 193
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=55.82 E-value=46 Score=30.91 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=52.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-------------c--HHHHHHHHHHHHHhCCCcEEEeec---CCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-------------G--SGHFAQTVRKLKELKPNMLIEALV---PDF 218 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-------------G--~~~~~~lir~Ik~~~p~i~Ie~l~---pd~ 218 (375)
.+.+.-.+.++++.+.|++-|.|----.|-+.|| | ...+.+++++|++..+++.+-+++ |-+
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 3467888999999999999888764333333343 1 235678899998764455454432 212
Q ss_pred -CCChHHHHHHHHcCcccc
Q 017200 219 -RGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 219 -~g~~e~l~~L~~aGldv~ 236 (375)
.|....++.++++|+|.+
T Consensus 109 ~~g~e~f~~~~~~aGvdgv 127 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAGVDSV 127 (267)
T ss_dssp HHCHHHHHHHHHHHTCCEE
T ss_pred HhhHHHHHHHHHHcCCCEE
Confidence 133567899999999974
No 194
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=55.69 E-value=1.2e+02 Score=27.56 Aligned_cols=130 Identities=14% Similarity=0.140 Sum_probs=75.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCC--C----hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--N----NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g--~----~e~l~~L~~ 230 (375)
.+.+++.+.++.+.+.|+.-|++.- .+. ...+.++.. |.+++...++.-.| . ....+...+
T Consensus 33 ~t~~~i~~l~~~a~~~~~~aVcv~p-----------~~v-~a~~~l~~~-~~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 33 ATEEDVRNLVREASDYGFRCAVLTP-----------VYT-VKISGLAEK-LGVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECH-----------HHH-HHHHHHHHH-HTCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEch-----------HHh-eeehHhCCC-CCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 4678999999999999999998662 223 233344432 35777776632122 1 233455566
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|.|-+..-+.-- .+... -+++.-.+.+.+++ .|+++|.=+-.|+= |++++....+...++|.|+|.-.
T Consensus 100 ~GAdEID~vinig-~~~~~------v~~ei~~v~~a~~~---~g~~lKvIlEt~~L-~~e~i~~a~ria~eaGADfVKTs 168 (234)
T 1n7k_A 100 AGATELDVVPHLS-LGPEA------VYREVSGIVKLAKS---YGAVVKVILEAPLW-DDKTLSLLVDSSRRAGADIVKTS 168 (234)
T ss_dssp HTCCEEEECCCGG-GCHHH------HHHHHHHHHHHHHH---TTCEEEEECCGGGS-CHHHHHHHHHHHHHTTCSEEESC
T ss_pred cCCCEEEEeccch-HHHHH------HHHHHHHHHHHHhh---cCCeEEEEEeccCC-CHHHHHHHHHHHHHhCCCEEEeC
Confidence 7887554322100 00001 12333345555555 24555433322321 78999999999999999999874
No 195
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=55.66 E-value=1.4e+02 Score=28.21 Aligned_cols=87 Identities=9% Similarity=0.118 Sum_probs=50.8
Q ss_pred HHHHHHHHcCcccccccccc---hHHHH-HHhcCC----CCCHHH----HHHHHHHHHHhCCCCceEEEeEEE----ecC
Q 017200 223 GCVREVAKSGLNVFAHNIET---VEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAGTLTKTSIML----GCG 286 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEt---v~rl~-~~mr~r----~~s~~~----~l~vl~~ak~~~p~Gl~tkt~imv----GlG 286 (375)
+..+.++++|.|.+..|.-. ....+ +..+.| +.+.+. .+++++.+++.. . +++..-|=. .-|
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~-~pv~vris~~~~~~~g 225 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-D-GPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C-SCEEEEEECCCCSTTS
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-C-CcEEEEecCcccCCCC
Confidence 34566678899987654210 11111 111111 233433 377888888865 2 222222211 116
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 287 ETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 287 ET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
-+.++..+.++.|.+.|+|.+++..
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7899999999999999999999863
No 196
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=55.60 E-value=30 Score=34.65 Aligned_cols=124 Identities=19% Similarity=0.280 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC------CCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK------PNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~------p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.+.++.+.+.++..+.++-.+. .+ -|.-...++++.+.... +.+.+..-.+......+.+..+.++|+|.+
T Consensus 177 ~ea~~~m~~~~~~~lpVVd~~g-~l--vGiIt~~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v 253 (494)
T 1vrd_A 177 EKAKEILHQHRIEKLPLVSKDN-KL--VGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVI 253 (494)
T ss_dssp -----------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCcEEEEEcCCC-eE--EEEEEHHHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHhCCCEE
Confidence 3344556667777776653211 11 23444455666654321 122332222222113678899999999987
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
..+.- ...+...++.++.+++..|. +++ ++|-+-|.++. +.+.+.|+|.|.++
T Consensus 254 ~i~~~------------~G~~~~~~e~i~~i~~~~p~-~pv----i~g~~~t~e~a----~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 254 VIDTA------------HGHSRRVIETLEMIKADYPD-LPV----VAGNVATPEGT----EALIKAGADAVKVG 306 (494)
T ss_dssp EECCS------------CCSSHHHHHHHHHHHHHCTT-SCE----EEEEECSHHHH----HHHHHTTCSEEEEC
T ss_pred EEEec------------CCchHHHHHHHHHHHHHCCC-ceE----EeCCcCCHHHH----HHHHHcCCCEEEEc
Confidence 54310 11346678999999998763 543 45777787776 56678999999885
No 197
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=55.56 E-value=25 Score=34.01 Aligned_cols=56 Identities=20% Similarity=0.278 Sum_probs=43.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CCc-cc------HHHHHHHHHHHHHhCCCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDD-LAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~d-~G------~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++.+.+++.++.+.++|++-|.|=|+..+. ..| .| -.-+...|+.||+.+|++.|-
T Consensus 66 ~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~Vi 129 (342)
T 1h7n_A 66 IGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYII 129 (342)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 789999999999999999999999983220 122 11 124678999999999997663
No 198
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=55.29 E-value=29 Score=31.45 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=83.7
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d--~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
.|...+.+.++.+ +.|++++++=--|..-.|. .| ...++.|++... .+.+++.+-|- ...++.+.++|+
T Consensus 10 ~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G----~~~v~~lr~~~~~~~dvhLmv~dp---~~~i~~~~~aGA 81 (231)
T 3ctl_A 10 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLS----PFFVSQVKKLATKPLDCHLMVTRP---QDYIAQLARAGA 81 (231)
T ss_dssp SCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBC----HHHHHHHHTTCCSCEEEEEESSCG---GGTHHHHHHHTC
T ss_pred CChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhc----HHHHHHHHhccCCcEEEEEEecCH---HHHHHHHHHcCC
Confidence 6777888888888 9999987665444332222 23 457888887541 14555555431 235799999999
Q ss_pred ccccccccc-hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 234 NVFAHNIET-VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 234 dv~~hnlEt-v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
|.+....|+ .+ + ..++++.+++ .|+ +.++-+.-+ |..+.++.+. + ++|+|.+..
T Consensus 82 d~itvh~Ea~~~-----------~---~~~~i~~i~~---~G~--k~gv~lnp~-tp~~~~~~~l---~-~~D~Vlvms- 136 (231)
T 3ctl_A 82 DFITLHPETING-----------Q---AFRLIDEIRR---HDM--KVGLILNPE-TPVEAMKYYI---H-KADKITVMT- 136 (231)
T ss_dssp SEEEECGGGCTT-----------T---HHHHHHHHHH---TTC--EEEEEECTT-CCGGGGTTTG---G-GCSEEEEES-
T ss_pred CEEEECcccCCc-----------c---HHHHHHHHHH---cCC--eEEEEEECC-CcHHHHHHHH---h-cCCEEEEee-
Confidence 999866665 32 1 1255666666 453 455554333 5544433222 1 567766531
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHhh
Q 017200 313 MRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (375)
Q Consensus 313 l~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (375)
..|+.-+-+... -..++.++++++..+.|
T Consensus 137 V~pGfggQ~f~~-~~l~kI~~lr~~~~~~~ 165 (231)
T 3ctl_A 137 VDPGFAGQPFIP-EMLDKLAELKAWREREG 165 (231)
T ss_dssp SCTTCSSCCCCT-THHHHHHHHHHHHHHHT
T ss_pred eccCcCCccccH-HHHHHHHHHHHHHhccC
Confidence 245332221111 12345556666554433
No 199
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=55.18 E-value=30 Score=30.74 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc---Cccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS---GLNVFA 237 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a---Gldv~~ 237 (375)
++.+.++.+.+.|++.|.+|+.+++.... |. -.+++++|++.. ++.|-+. +... +.+.+..+.++ |+|.+-
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~--~~~~~~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLG-GP--NLDLLAGVADRT-DAPVIAS-GGVS-SLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTS-CC--CHHHHHHHHTTC-SSCEEEE-SCCC-SHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccC-CC--CHHHHHHHHHhC-CCCEEEE-CCCC-CHHHHHHHHhhccCCCCEEE
Confidence 67788888889999999999987653321 22 145677777643 3444332 3331 56888999988 888654
Q ss_pred c
Q 017200 238 H 238 (375)
Q Consensus 238 h 238 (375)
.
T Consensus 224 v 224 (244)
T 2y88_A 224 V 224 (244)
T ss_dssp E
T ss_pred E
Confidence 4
No 200
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=54.91 E-value=17 Score=32.43 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc---Cccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS---GLNVFA 237 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a---Gldv~~ 237 (375)
.+.+.++.+.+.|++.|.+|+++++.-. .|. -.+++++|++.. ++.|-+. +... +.+.+..++++ |+|.+-
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~-~g~--~~~~~~~i~~~~-~ipvia~-GGI~-~~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDGTL-QGP--NLELLKNVCAAT-DRPVVAS-GGVS-SLDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC--------CC--CHHHHHHHHHTC-SSCEEEE-SCCC-SHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEeccCccccc-CCC--CHHHHHHHHHhc-CCCEEEE-CCCC-CHHHHHHHHhhccCCCceee
Confidence 5667778888899999999998764321 122 256777777654 3444432 3331 56889999998 988765
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 221 vG 222 (244)
T 1vzw_A 221 VG 222 (244)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 201
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=54.55 E-value=32 Score=32.84 Aligned_cols=77 Identities=9% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d----~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+++.+++.|+++.+.|.+-|-|=|. .|+.... .-...+..+|+.|++.. ++.|.+=+ + +.+.++.-.+
T Consensus 29 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSIDT--~--~~~Va~aAl~ 103 (314)
T 2vef_A 29 FFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISIDT--W--KSQVAEAALA 103 (314)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEC--S--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEEeC--C--CHHHHHHHHH
Confidence 367899999999999999999988773 4554311 12456777888887754 44444322 2 5677777777
Q ss_pred cCccccc
Q 017200 231 SGLNVFA 237 (375)
Q Consensus 231 aGldv~~ 237 (375)
+|.+.++
T Consensus 104 aGa~iIN 110 (314)
T 2vef_A 104 AGADLVN 110 (314)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 7777765
No 202
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=54.55 E-value=18 Score=33.43 Aligned_cols=142 Identities=12% Similarity=0.117 Sum_probs=80.6
Q ss_pred CcCCCCCCCCCCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecC-CCCCC
Q 017200 143 CRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP-DFRGN 221 (375)
Q Consensus 143 C~FC~v~~~r~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~p-d~~g~ 221 (375)
|.-..||.+. .+.+.-+.+++.+.+.|.++|-+.- +...+.++..+.+.+-|+.|++..++..+.+.+. .+. +
T Consensus 82 ~tVigFP~G~----~~~~~Kv~Ea~~Ai~~GAdEIDmVi-Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L-t 155 (239)
T 3ngj_A 82 CTVIGFPLGA----TPSEVKAYETKVAVEQGAEEVDMVI-NIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL-T 155 (239)
T ss_dssp EEEESTTTCC----SCHHHHHHHHHHHHHTTCSEEEEEC-CHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS-C
T ss_pred EEEeccCCCC----CchHHHHHHHHHHHHcCCCEEEEEe-ehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC-C
Confidence 4445566433 2356667788888899999997763 2222223335667778888887765556665543 233 5
Q ss_pred hHHHHHH----HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHH
Q 017200 222 NGCVREV----AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTME 297 (375)
Q Consensus 222 ~e~l~~L----~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~ 297 (375)
++.+... .++|+|.+.-+ -- ..+.+++.++..-..+.+. ..+.+|..- |. -|.+|.++.+
T Consensus 156 ~eei~~a~~ia~~aGADfVKTS----TG----f~~ggAt~~dv~lmr~~vg----~~v~VKasG--GI-rt~~da~~~i- 219 (239)
T 3ngj_A 156 NEEKVEVCKRCVAAGAEYVKTS----TG----FGTHGATPEDVKLMKDTVG----DKALVKAAG--GI-RTFDDAMKMI- 219 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEECC----CS----SSSCCCCHHHHHHHHHHHG----GGSEEEEES--SC-CSHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHCcCEEECC----CC----CCCCCCCHHHHHHHHHhhC----CCceEEEeC--CC-CCHHHHHHHH-
Confidence 5666655 78898876422 00 0114566654332222222 224555442 22 4777776666
Q ss_pred HHHHcCCcEEee
Q 017200 298 KVRAAGVDVMTF 309 (375)
Q Consensus 298 ~Lrelgvd~v~i 309 (375)
++|.+.+..
T Consensus 220 ---~aGA~riGt 228 (239)
T 3ngj_A 220 ---NNGASRIGA 228 (239)
T ss_dssp ---HTTEEEEEE
T ss_pred ---Hhcccceec
Confidence 778777655
No 203
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=54.33 E-value=49 Score=33.10 Aligned_cols=81 Identities=12% Similarity=0.159 Sum_probs=53.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCC--CC-----Cccc---H---HHHHHHHHHHHHhCC-CcEEEeecCCCCCCh
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRD--DL-----ADQG---S---GHFAQTVRKLKELKP-NMLIEALVPDFRGNN 222 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~--dl-----~d~G---~---~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~ 222 (375)
++.+++.+.|+.+.+.|++.|++++.... ++ ..+| . ..-.++++.|++..+ ++.|-.. +... +.
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~-GGI~-s~ 385 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS-GGIF-SG 385 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE-SSCC-SH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE-CCCC-CH
Confidence 44558999999999999999999987542 22 0122 1 123578888888753 4544332 3332 66
Q ss_pred HHHHHHHHcCccccccc
Q 017200 223 GCVREVAKSGLNVFAHN 239 (375)
Q Consensus 223 e~l~~L~~aGldv~~hn 239 (375)
+.+.+...+|+|.+..+
T Consensus 386 ~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 386 LDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 67777778999987654
No 204
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=54.18 E-value=24 Score=31.11 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=47.0
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.++.+.++.+.++|+++|.+++.+.+.... |. -.+.++.+++.. ++.|-+. +... +.+.+..+.++|+|.+-.
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~--~~~~i~~l~~~~-~~pvia~-GGi~-~~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTGL-GY--DVELIRRVADSV-RIPVIAS-GGAG-RVEHFYEAAAAGADAVLA 226 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTCS-CC--CHHHHHHHHHHC-SSCEEEE-SCCC-SHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCcC-cC--CHHHHHHHHHhc-CCCEEEe-CCCC-CHHHHHHHHHcCCcHHHH
Confidence 467777888899999999999876533211 12 135667776654 3444332 2221 457888888999887654
No 205
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=53.89 E-value=34 Score=33.35 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=60.0
Q ss_pred CCcEEEeecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017200 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (375)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt 279 (375)
.++..-+++|-- .| | ...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 61 ~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~-------~~Ls~eEr~~vi~~~ve~~~g----rv 129 (360)
T 4dpp_A 61 LRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEG-------QLMSWDEHIMLIGHTVNCFGG----SI 129 (360)
T ss_dssp CCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TS
T ss_pred CCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccCh-------hhCCHHHHHHHHHHHHHHhCC----CC
Confidence 355666666621 11 3 445666778888754322112221 134678899999988886432 34
Q ss_pred eEEEecC-CCHHHHHHHHHHHHHcCCcEEee
Q 017200 280 SIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 280 ~imvGlG-ET~ee~~etl~~Lrelgvd~v~i 309 (375)
-+|+|.| .+-+|.++..+...++|+|.+-+
T Consensus 130 pViaGvg~~st~eai~la~~A~~~Gadavlv 160 (360)
T 4dpp_A 130 KVIGNTGSNSTREAIHATEQGFAVGMHAALH 160 (360)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5889995 68999999999999999986544
No 206
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=53.63 E-value=26 Score=33.62 Aligned_cols=54 Identities=24% Similarity=0.316 Sum_probs=42.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHHhCCCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d-~G------~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++.+.+++.++.+.++|++-|.|=|+.. ..| .| -.-+...|+.||+.+|++.|-
T Consensus 55 ~sid~l~~~~~~~~~lGi~~v~LFgvp~--~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vi 115 (323)
T 1l6s_A 55 IPEKHLAREIERIANAGIRSVMTFGISH--HTDETGSDAWREDGLVARMSRICKQTVPEMIVM 115 (323)
T ss_dssp EEGGGHHHHHHHHHHHTCCEEEEEEECS--SCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCC--CCCccccccCCCCCcHHHHHHHHHHHCCCeEEE
Confidence 6889999999999999999999999831 122 11 124678999999999997663
No 207
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=53.36 E-value=1e+02 Score=28.82 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEee-eCCCCCcc----cHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLADQ----GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsg-dr~dl~d~----G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+.++.++.|+++.+.|.+-|-|=|. .||.-..- -...+.-+|+.|++ +++.|.+ -.+ ..+..+.-.+
T Consensus 26 ~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSI--DT~--~~~Va~~al~ 99 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISV--DTF--RSEVAEACLK 99 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEE--ECS--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEE--ECC--CHHHHHHHHH
Confidence 367889999999999999999887554 35543221 13455666666654 4555433 222 4666666677
Q ss_pred cCcccccc--cccchHHHHHH----------hc--C-CCCC------HHHHHHHHHHHHHhCCCCceEEEeEE----Eec
Q 017200 231 SGLNVFAH--NIETVEELQSA----------VR--D-HRAN------FKQSLDVLMMAKDYVPAGTLTKTSIM----LGC 285 (375)
Q Consensus 231 aGldv~~h--nlEtv~rl~~~----------mr--~-r~~s------~~~~l~vl~~ak~~~p~Gl~tkt~im----vGl 285 (375)
+|.+.+|- +....+++++- |+ . +++. .+...+.++.+.+ .|+. .-.|| +||
T Consensus 100 aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~---aGI~-~~~IilDPGiGF 175 (270)
T 4hb7_A 100 LGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKI---AGIP-SNKIWLDPGIGF 175 (270)
T ss_dssp HTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHH---TTCC-GGGEEEECCTTS
T ss_pred hccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHH---cCCC-CceEEEeCCCCc
Confidence 77776652 11111233222 11 0 1111 1222334455555 4642 22333 388
Q ss_pred CCCHHHHHHHHHHHHHc
Q 017200 286 GETPDQVVSTMEKVRAA 302 (375)
Q Consensus 286 GET~ee~~etl~~Lrel 302 (375)
|-|.++=++.|+.|.++
T Consensus 176 gKt~~~N~~ll~~l~~~ 192 (270)
T 4hb7_A 176 AKTRNEEAEVMARLDEL 192 (270)
T ss_dssp SCCHHHHHHHHTCHHHH
T ss_pred ccccccHHHHHhhHHHH
Confidence 99999877777666554
No 208
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=52.69 E-value=50 Score=30.76 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=54.4
Q ss_pred HHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHH
Q 017200 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRA 301 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lre 301 (375)
..++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pvi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEA-------TTMTETERKETIKFVIDKVNK----RIPVIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCcccHHHHHHHHHHHHh
Confidence 44556677787754222112221 135678999999998886432 34589999 4588999999999999
Q ss_pred cCCcEEee-ecCC-CC
Q 017200 302 AGVDVMTF-GQYM-RP 315 (375)
Q Consensus 302 lgvd~v~i-~qYl-~P 315 (375)
+|+|.+-+ .+|+ .|
T Consensus 95 ~Gadavlv~~P~y~~~ 110 (291)
T 3a5f_A 95 IGVDGLLVITPYYNKT 110 (291)
T ss_dssp TTCSEEEEECCCSSCC
T ss_pred cCCCEEEEcCCCCCCC
Confidence 99986533 3443 44
No 209
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=52.64 E-value=77 Score=28.40 Aligned_cols=86 Identities=16% Similarity=0.252 Sum_probs=51.6
Q ss_pred CCCCCcchHHHHH-HHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeec--CCCCC------ChHH
Q 017200 154 PPPPDPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------NNGC 224 (375)
Q Consensus 154 ~~~ld~eEi~~~a-~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd~~g------~~e~ 224 (375)
|.+-..++.++.| +.+.+.|+++||+-|-... .+..+++ .+ .++.|-+.+ ..|.+ ++|.
T Consensus 23 ~G~eNT~~tl~la~era~e~~Ik~iVVAS~sG~-----TA~k~~e---~~----~~i~lVvVTh~~GF~~pg~~e~~~e~ 90 (201)
T 1vp8_A 23 PGRENTEETLRLAVERAKELGIKHLVVASSYGD-----TAMKALE---MA----EGLEVVVVTYHTGFVREGENTMPPEV 90 (201)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSH-----HHHHHHH---HC----TTCEEEEEECCTTSSSTTCCSSCHHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCCh-----HHHHHHH---Hh----cCCeEEEEeCcCCCCCCCCCcCCHHH
Confidence 3334456666655 5577889999999876432 1222333 22 345554433 12221 6899
Q ss_pred HHHHHHcCcccc--cccccchH-HHHHHhc
Q 017200 225 VREVAKSGLNVF--AHNIETVE-ELQSAVR 251 (375)
Q Consensus 225 l~~L~~aGldv~--~hnlEtv~-rl~~~mr 251 (375)
.+.|.+.|..++ .|.+..++ .+.++..
T Consensus 91 ~~~L~~~G~~V~t~tH~lsgveR~is~kfG 120 (201)
T 1vp8_A 91 EEELRKRGAKIVRQSHILSGLERSISRKLG 120 (201)
T ss_dssp HHHHHHTTCEEEECCCTTTTTHHHHHHHTC
T ss_pred HHHHHhCCCEEEEEeccccchhHHHHHhcC
Confidence 999999999987 45567777 4445554
No 210
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=52.50 E-value=12 Score=34.42 Aligned_cols=79 Identities=10% Similarity=0.067 Sum_probs=53.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d--~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.|+..+.+.++.+.+.|++.+++=--|..-.|. .| ...+++|++..+. .+++.+-+ ....++.+.++|+|
T Consensus 23 ~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G----~~~v~~lr~~~~~-DvhLMv~~---p~~~i~~~~~aGAd 94 (237)
T 3cu2_A 23 ANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVG----AIGIKYFPTHCFK-DVHLMVRN---QLEVAKAVVANGAN 94 (237)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC----THHHHTSCTTSEE-EEEEECSC---HHHHHHHHHHTTCS
T ss_pred CCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhh----HHHHHHHhhhCCC-CeEEEEEC---HHHHHHHHHHcCCC
Confidence 677888888999999999987665444332221 23 2677778776553 55554422 24568999999999
Q ss_pred cccccccch
Q 017200 235 VFAHNIETV 243 (375)
Q Consensus 235 v~~hnlEtv 243 (375)
.+....|..
T Consensus 95 ~itvH~ea~ 103 (237)
T 3cu2_A 95 LVTLQLEQY 103 (237)
T ss_dssp EEEEETTCT
T ss_pred EEEEecCCc
Confidence 987766653
No 211
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=52.44 E-value=60 Score=30.18 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=52.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lr 300 (375)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGES-------ATLNHDEHADVVMMTLDLADG----RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCccHHHHHHHHHHHH
Confidence 345566677787764322112221 135678899999998885432 34589999 458899999999999
Q ss_pred HcCCcEEee
Q 017200 301 AAGVDVMTF 309 (375)
Q Consensus 301 elgvd~v~i 309 (375)
++|+|.+-+
T Consensus 94 ~~Gadavlv 102 (292)
T 2ojp_A 94 DSGIVGCLT 102 (292)
T ss_dssp TSSCSEEEE
T ss_pred hcCCCEEEE
Confidence 999986544
No 212
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=52.15 E-value=1.4e+02 Score=30.08 Aligned_cols=126 Identities=11% Similarity=0.151 Sum_probs=74.7
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC------CCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK------PNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~------p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.+.+..+.+.+.++..+.++--+ -.-.|.-...++++.+.... ..+.+.+-.+......+.++.|.++|+|
T Consensus 194 ~l~eal~~m~~~~i~~lpVVDe~---g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 194 TLSEAEKILQKYKIEKLPLVDNN---GVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp CHHHHHHHHHHHTCSEEEEECTT---SBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEEEeCC---CCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccc
Confidence 45556666778899888876211 11124445667777775421 1123333222221136778889999999
Q ss_pred cccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 235 VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 235 v~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.+..+.. .......++.++.+++.+|. +.+ ++|-.-|.++ .+.+.+.|+|.|.++
T Consensus 271 ~I~Id~a------------~g~~~~v~~~i~~i~~~~~~-~~v----i~g~v~t~e~----a~~~~~aGad~i~vg 325 (511)
T 3usb_A 271 AIVLDTA------------HGHSQGVIDKVKEVRAKYPS-LNI----IAGNVATAEA----TKALIEAGANVVKVG 325 (511)
T ss_dssp EEEEECS------------CTTSHHHHHHHHHHHHHCTT-SEE----EEEEECSHHH----HHHHHHHTCSEEEEC
T ss_pred eEEeccc------------ccchhhhhhHHHHHHHhCCC-ceE----EeeeeccHHH----HHHHHHhCCCEEEEC
Confidence 8765411 12346678899999997764 433 2333235554 566778899999875
No 213
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=52.10 E-value=22 Score=32.41 Aligned_cols=75 Identities=9% Similarity=0.053 Sum_probs=51.5
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..+|++.|+...+.|++++++.=-+... .|.....++++.|.+.. .+.+.+ +.-..+.+.++.+.++|+|.+-.
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a~---~~~~~~~~~i~~i~~~~-~~pl~v--GGGIrs~e~~~~~l~~GadkVii 103 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGAK---DPSKRQFALIEKLAKEV-SVNLQV--GGGIRSKEEVKALLDCGVKRVVI 103 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHHH---CGGGCCHHHHHHHHHHC-CSEEEE--ESSCCCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCccc---ccchhHHHHHHHHHHhc-CCCeEe--ccccccHHHHHHHHHcCCCEEEE
Confidence 4579999999999999999988443110 12223457888887754 244432 22222789999999999998876
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
|
T Consensus 104 ~ 104 (243)
T 4gj1_A 104 G 104 (243)
T ss_dssp C
T ss_pred c
Confidence 6
No 214
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=51.96 E-value=53 Score=30.76 Aligned_cols=126 Identities=13% Similarity=0.153 Sum_probs=70.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCC---cEEEe-ecCCCCCChHHHHHHHHcC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~---i~Ie~-l~pd~~g~~e~l~~L~~aG 232 (375)
-+++.+++.++++.+.|++.|.|---..--. ...+.++++.+++..|+ +.|.+ +.-++.--......-.++|
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aG 222 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTN----PTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENG 222 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCC----HHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCC----HHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhC
Confidence 5688899999999999999887752222111 45688999999998885 44553 2223211122233344689
Q ss_pred cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017200 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (375)
Q Consensus 233 ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lre 301 (375)
++.+...+-..=+ +......++.+..|+.-.+. .| +.|++ ..+.+.++-+.+.+
T Consensus 223 a~~vd~sv~GlGe-----raGN~~~E~vv~~L~~~~~~--~g--~~tgi------dl~~L~~~s~~v~~ 276 (293)
T 3ewb_X 223 ARRVEGTINGIGE-----RAGNTALEEVAVALHIRKDF--YQ--AETNI------VLNQFKNSSDLISR 276 (293)
T ss_dssp CCEEEEBGGGCCT-----TTCBCBHHHHHHHHHHTHHH--HC--EEECC------CGGGHHHHHHHHHH
T ss_pred CCEEEeecccccc-----ccccHhHHHHHHHHHhhhhh--cC--CCCCC------CHHHHHHHHHHHHH
Confidence 9877543322111 12345566665555542221 13 33333 44556665555554
No 215
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=51.75 E-value=84 Score=29.21 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=73.0
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCC--CC-ChHHHHHHHHcCcccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF--RG-NNGCVREVAKSGLNVF 236 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~--~g-~~e~l~~L~~aGldv~ 236 (375)
+...+.++.+++.|++.||+=--+.+.--| .+...++++... .+.+- +.-.| .. ..+.++.|.+.|++.+
T Consensus 73 ~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD--~~~~~~Li~~a~----~~~vT-FHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 73 AAILEDVRTVRELGFPGLVTGVLDVDGNVD--MPRMEKIMAAAG----PLAVT-FHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCBCTTSSBC--HHHHHHHHHHHT----TSEEE-ECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeeECCCCCcC--HHHHHHHHHHhC----CCcEE-EECchhccCCHHHHHHHHHHcCCCEE
Confidence 344567788999999999875444433344 344444443332 23332 21111 11 2567899999998865
Q ss_pred -cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 237 -AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 237 -~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.++. ..+..+-++.|+.+.+. .+ ...||.|-|=+.+.+.+.+ +.|+..++++
T Consensus 146 LTSG~-------------~~~a~~g~~~L~~Lv~~--a~---~i~Im~GgGv~~~Ni~~l~----~tGv~e~H~S 198 (256)
T 1twd_A 146 LTSGQ-------------KSDALQGLSKIMELIAH--RD---APIIMAGAGVRAENLHHFL----DAGVLEVHSS 198 (256)
T ss_dssp EECTT-------------SSSTTTTHHHHHHHHTS--SS---CCEEEEESSCCTTTHHHHH----HHTCSEEEEC
T ss_pred ECCCC-------------CCCHHHHHHHHHHHHHh--hC---CcEEEecCCcCHHHHHHHH----HcCCCeEeEC
Confidence 4432 12233445566666553 22 5679999998888877643 6899988875
No 216
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=51.61 E-value=29 Score=30.28 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCC--CCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRD--DLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~--dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
.+|+.+..+.++.+.+.|++.+.+---+.. .....| .+.+++|++..+ .+.+.+.+-| ..+.++.+.++|
T Consensus 12 a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g----~~~i~~i~~~~~~~~~v~l~v~d---~~~~i~~~~~~g 84 (220)
T 2fli_A 12 AADYANFASELARIEETDAEYVHIDIMDGQFVPNISFG----ADVVASMRKHSKLVFDCHLMVVD---PERYVEAFAQAG 84 (220)
T ss_dssp GSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC----HHHHHHHHTTCCSEEEEEEESSS---GGGGHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccC----HHHHHHHHHhCCCCEEEEEeecC---HHHHHHHHHHcC
Confidence 368888999999999999998776643322 111112 567888887652 2344444322 123579999999
Q ss_pred cccccccc
Q 017200 233 LNVFAHNI 240 (375)
Q Consensus 233 ldv~~hnl 240 (375)
+|.+..+.
T Consensus 85 ad~v~vh~ 92 (220)
T 2fli_A 85 ADIMTIHT 92 (220)
T ss_dssp CSEEEEEG
T ss_pred CCEEEEcc
Confidence 99886543
No 217
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=50.74 E-value=23 Score=34.05 Aligned_cols=54 Identities=17% Similarity=0.309 Sum_probs=42.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHHhCCCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d-~G------~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++.+.+++.++.+.++|++-|.|=|+.. ..| .| -.-+...|+.||+.+|++.|-
T Consensus 61 ~sid~l~~~~~~~~~lGi~~v~LFgvp~--~Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vi 121 (328)
T 1w1z_A 61 FTIDRAVEECKELYDLGIQGIDLFGIPE--QKTEDGSEAYNDNGILQQAIRAIKKAVPELCIM 121 (328)
T ss_dssp EEHHHHHHHHHHHHHHTCCEEEEEECCS--SCCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCC--CCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 6889999999999999999999999931 122 11 124678999999999997663
No 218
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=50.23 E-value=1.5e+02 Score=27.45 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=70.3
Q ss_pred HHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHH
Q 017200 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQ 247 (375)
Q Consensus 168 al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~ 247 (375)
+....|.+-|.|....- .+ ..+.++++..++..-++.||+- +.+.++...++|.+.++.| +|=
T Consensus 121 eAr~~GADaILLI~a~L---~~---~~l~~l~~~A~~lGl~~LvEVh------~~~El~rAl~~~a~iIGIN----NRn- 183 (258)
T 4a29_A 121 DAYNLGADTVLLIVKIL---TE---RELESLLEYARSYGMEPLILIN------DENDLDIALRIGARFIGIM----SRD- 183 (258)
T ss_dssp HHHHHTCSEEEEEGGGS---CH---HHHHHHHHHHHHTTCCCEEEES------SHHHHHHHHHTTCSEEEEC----SBC-
T ss_pred HHHHcCCCeeehHHhhc---CH---HHHHHHHHHHHHHhHHHHHhcc------hHHHHHHHhcCCCcEEEEe----CCC-
Confidence 45578999999886432 22 3455666665555445666653 6788999999999999876 110
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHhCCCCce--EEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 248 SAVRDHRANFKQSLDVLMMAKDYVPAGTL--TKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 248 ~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~--tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
-.+++-.+++-..+....|.+.. .-+|| .|.+|+ ..+++.|++.+-+|..+
T Consensus 184 ------L~tf~vdl~~t~~L~~~ip~~~~~VsESGI-----~t~~dv----~~l~~~G~~a~LVGeal 236 (258)
T 4a29_A 184 ------FETGEINKENQRKLISMIPSNVVKVAKLGI-----SERNEI----EELRKLGVNAFLISSSL 236 (258)
T ss_dssp ------TTTCCBCHHHHHHHHTTSCTTSEEEEEESS-----CCHHHH----HHHHHTTCCEEEECHHH
T ss_pred ------ccccccCHHHHHHHHhhCCCCCEEEEcCCC-----CCHHHH----HHHHHCCCCEEEECHHH
Confidence 11222223333444445555542 23444 577765 45788999999998764
No 219
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=50.19 E-value=35 Score=32.58 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=59.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCC---cEEEe-ecCCCCCChHHHHHHHHcC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~---i~Ie~-l~pd~~g~~e~l~~L~~aG 232 (375)
-+++.+++.++++.+.|++.|.|---..--. ...+.++++.|++..|+ +.|.+ ..-++.--......-.++|
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aG 223 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNIPDTTGYML----PWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNG 223 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSSCCC----HHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHhcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 5688899999999999999886542211111 35688999999998886 66664 2223211122233334679
Q ss_pred cccccccccchHHHHHHhcCCCCCHHHHHHHHHH
Q 017200 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMM 266 (375)
Q Consensus 233 ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ 266 (375)
++.+...+-..-+ +......++.+-.|+.
T Consensus 224 a~~vd~tv~GlGe-----r~GN~~lE~vv~~L~~ 252 (325)
T 3eeg_A 224 ARQVECTINGIGE-----RAGNTALEEVVMAMEC 252 (325)
T ss_dssp CCEEEEBGGGCCS-----TTCCCBHHHHHHHHHH
T ss_pred CCEEEEecccccc-----cccchhHHHHHHHHHh
Confidence 8876543322111 1134556666666654
No 220
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=50.08 E-value=49 Score=28.84 Aligned_cols=65 Identities=12% Similarity=0.027 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeCCCCCcccH---HHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGS---GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsgdr~dl~d~G~---~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
+.+.++++.+.|++.|.|.--+.+ .... ..+++.++.+...+ ++. +++. +.++.+.++|+|.+..
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~~~~~~~~l~~~~~~~-~v~--v~v~------~~~~~a~~~gad~v~l 100 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGD---ALTGEARIKFAEKAQAACREA-GVP--FIVN------DDVELALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTT---CCCHHHHHHHHHHHHHHHHHH-TCC--EEEE------SCHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCC---HhHHHHHHHHHHHHHHHHHHc-CCe--EEEc------CHHHHHHHcCCCEEEE
Confidence 788899999999999987732221 1112 23333333333321 222 2222 2356778889987744
No 221
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=49.32 E-value=38 Score=34.71 Aligned_cols=90 Identities=12% Similarity=0.151 Sum_probs=57.5
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH-cCccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNVFAHN 239 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGldv~~hn 239 (375)
+.++.++.+.+.|+++|++|+.+++.... |.+ .+++++|++.. .+.|-+ .++. ++.+.+..+++ .|++.+-.+
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~~dG~~~-G~d--~~li~~l~~~~-~iPVIa-sGGi-~s~~d~~~~~~~~G~~gvivg 526 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCIDKDGSNS-GYD--LELIEHVKDAV-KIPVIA-SSGA-GVPEHFEEAFLKTRADACLGA 526 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGGGTTTCS-CCC--HHHHHHHHHHC-SSCEEE-CSCC-CSHHHHHHHHHHSCCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCCCCCC-CCC--HHHHHHHHHhC-CccEEE-ECCC-CCHHHHHHHHHhcCChHHHHH
Confidence 46788999999999999999998765432 333 56788887754 243332 2333 27788888887 787754322
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHH
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVL 264 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl 264 (375)
..+ .. ...++.+..+.+
T Consensus 527 ----~a~---~~-~~~~~~e~~~~l 543 (555)
T 1jvn_A 527 ----GMF---HR-GEFTVNDVKEYL 543 (555)
T ss_dssp ----HHH---HT-TSCCHHHHHHHH
T ss_pred ----HHH---Hc-CCCCHHHHHHHH
Confidence 222 22 456666665554
No 222
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=49.02 E-value=48 Score=29.46 Aligned_cols=91 Identities=15% Similarity=0.070 Sum_probs=54.7
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
....+.++.+.+.|++.|++|+.+++... .|.+ .++++.+++.. ++.|-+. +... +.+.+..++++|+|.+-.+
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTK-EGYD--LRLTRMVAEAV-GVPVIAS-GGAG-RMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTC-SCCC--HHHHHHHHHHC-SSCEEEE-SCCC-SHHHHHHHHHTTCSEEEES
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCc-CCCC--HHHHHHHHHHc-CCCEEEe-CCCC-CHHHHHHHHHCCCHHHHHH
Confidence 35667778888899999999976654222 2222 56677777654 2333222 2321 5688888989998866442
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHH
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVL 264 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl 264 (375)
..+ +. ...++.+.++.+
T Consensus 226 ----sal---~~-~~~~~~~~~~~l 242 (252)
T 1ka9_F 226 ----SVF---HF-GEIPIPKLKRYL 242 (252)
T ss_dssp ----HHH---HT-TSSCHHHHHHHH
T ss_pred ----HHH---Hc-CCCCHHHHHHHH
Confidence 222 22 234666655554
No 223
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=49.02 E-value=54 Score=30.62 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=49.4
Q ss_pred EeEEEec--CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 279 TSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 279 t~imvGl--GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
.-+|.|. .|+.+...+..+.+++.|.+.+-+ |++.|-+....... .-.+.++.+++++.++|...+.
T Consensus 39 ~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~-~~~kprts~~~f~g-~g~~gl~~l~~~~~~~Gl~~~t 107 (276)
T 1vs1_A 39 KAVIAGPCSVESWEQVREAALAVKEAGAHMLRG-GAFKPRTSPYSFQG-LGLEGLKLLRRAGDEAGLPVVT 107 (276)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHHTCSEEEC-BSSCCCSSTTSCCC-CTHHHHHHHHHHHHHHTCCEEE
T ss_pred eEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEe-EEEeCCCChhhhcC-CCHHHHHHHHHHHHHcCCcEEE
Confidence 4577776 899999999999999999999887 66666221100111 2367899999999999987653
No 224
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=48.57 E-value=83 Score=29.30 Aligned_cols=116 Identities=18% Similarity=0.257 Sum_probs=68.2
Q ss_pred HHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHH
Q 017200 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEE 245 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~r 245 (375)
+.++...|.+-|+|-.. .+.+ ..+.++++..++.-=.+.+++- +.+.++...++|+|.+..|--.
T Consensus 135 i~ea~~~GAD~VlLi~a---~L~~---~~l~~l~~~a~~lGl~~lvevh------~~eEl~~A~~~ga~iIGinnr~--- 199 (272)
T 3tsm_A 135 VYEARSWGADCILIIMA---SVDD---DLAKELEDTAFALGMDALIEVH------DEAEMERALKLSSRLLGVNNRN--- 199 (272)
T ss_dssp HHHHHHTTCSEEEEETT---TSCH---HHHHHHHHHHHHTTCEEEEEEC------SHHHHHHHTTSCCSEEEEECBC---
T ss_pred HHHHHHcCCCEEEEccc---ccCH---HHHHHHHHHHHHcCCeEEEEeC------CHHHHHHHHhcCCCEEEECCCC---
Confidence 44567899999988654 3332 4466677666654212334442 6778888889999998776210
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 246 LQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 246 l~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+ ++-.-+ ++....+.+..|.++ -+|.+-| -|.+|+. .+.++|++.+-+|..
T Consensus 200 -l---~t~~~d----l~~~~~L~~~ip~~~----~vIaesGI~t~edv~----~l~~~Ga~gvLVG~a 251 (272)
T 3tsm_A 200 -L---RSFEVN----LAVSERLAKMAPSDR----LLVGESGIFTHEDCL----RLEKSGIGTFLIGES 251 (272)
T ss_dssp -T---TTCCBC----THHHHHHHHHSCTTS----EEEEESSCCSHHHHH----HHHTTTCCEEEECHH
T ss_pred -C---ccCCCC----hHHHHHHHHhCCCCC----cEEEECCCCCHHHHH----HHHHcCCCEEEEcHH
Confidence 0 101122 333444444444433 2334443 4888775 457899999999855
No 225
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=48.52 E-value=40 Score=34.92 Aligned_cols=51 Identities=20% Similarity=0.359 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhCCCCceE--EEeEE--EecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 260 SLDVLMMAKDYVPAGTLT--KTSIM--LGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 260 ~l~vl~~ak~~~p~Gl~t--kt~im--vGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.+++++.+++..+..+.+ +-+.- +--|-+.++.++.++.|.+.|+|+++++
T Consensus 194 ~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 194 AVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcC
Confidence 377888888865433322 22221 1127899999999999999999999885
No 226
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=48.46 E-value=1.7e+02 Score=27.01 Aligned_cols=173 Identities=13% Similarity=0.087 Sum_probs=86.4
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEE--eecCCCCCChHHHHHHHHcCcccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie--~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+.+....+.+.|+...|++...-. ..| -+++++ .+++ .|+-.+. .+.|+. ..+.|+.+.+.|+..+-+
T Consensus 55 ~~e~l~~~m~~~GI~~~Vlvq~~~~-~~d--N~~ll~---~l~~-~~~r~~Gva~vdp~~--~~~eL~~l~~~G~rGvR~ 125 (303)
T 4d9a_A 55 GPDMLFALRDHLGFARNVIVQASCH-GTD--NAATLD---AIAR-AQGKARGIAVVDPAI--DEAELAALHEGGMRGIRF 125 (303)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCGGG-TTC--CHHHHH---HHHH-TTTSEEEEECCCTTC--CHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHcCCCeEEEeccccc-ccc--HHHHHH---HHHh-CCCcEEEEEEeCCCC--CHHHHHHHHHCCCCEEEe
Confidence 4445555666889988888765311 112 233444 3444 3443222 233443 568899999999887776
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE--eeecCCCCC
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM--TFGQYMRPS 316 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v--~i~qYl~P~ 316 (375)
+...-. . ...+-.++..+++.+.+ |+.+..+ +| ..... +....+++.++.+| ++| .|.
T Consensus 126 ~~~~~~------~-~~~~~~~~~~~~~~l~~----gl~v~l~--~~-~~~l~---~l~~~~~~~~~~iVidH~G---~p~ 185 (303)
T 4d9a_A 126 NFLKRL------V-DDAPKDKFLEVAGRLPA----GWHVVIY--FE-ADILE---ELRPFMDAIPVPIVIDHMG---RPD 185 (303)
T ss_dssp ECCTTT------C-SCCCHHHHHHHHTSCCT----TCEEEEE--CC-GGGHH---HHHHHHHHCSSCEEEGGGG---CCC
T ss_pred ecccCC------c-cccCHHHHHHHHHHHhc----CCEEEEe--cc-cccHH---HHHHHHHHCCCcEEEeCCC---CCC
Confidence 643210 1 22344555555554433 5554433 23 22334 44445555544333 444 221
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHhhhhhh-ccchhhhhh-----cchhHHHHHHHHh
Q 017200 317 KRHMPVSEYITPEAFERYRALGMEMGFRYV-ASGPMVRSS-----YKVVGWCYYLIFN 368 (375)
Q Consensus 317 ~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~-~sgp~vrss-----y~a~~~~~~~~~~ 368 (375)
. ..-.....++.+.+++...+-.|+ .||+ .|.+ |..-..|++.+++
T Consensus 186 ~-----~~g~~~~~~~~~~~l~~~~~NV~vKlSg~-~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T 4d9a_A 186 V-----RQGPDGADMKAFRRLLDSREDIWFKATCP-DRLDPAGPPWDDFARSVAPLVA 237 (303)
T ss_dssp G-----GGCTTSHHHHHHHHHHHHCTTEEEECCCH-HHHCTTCTTCHHHHHHHHHHHH
T ss_pred c-----ccCCCCHHHHHHHHHHhhCCCEEEEeeCc-eecCCCCCCHHHHHHHHHHHHH
Confidence 1 000112356677777766565555 5774 4443 3333456665554
No 227
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=48.39 E-value=53 Score=31.73 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=51.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv 235 (375)
.+.++..+.++.+.+.|+++|.++++....-++. -.+.++.|++... +.|- ..+.+ +.+..+.+.++| +|.
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~----~~~~~~~i~~~~~-iPvi-~~Ggi--~~~~a~~~l~~g~aD~ 318 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDT----PVSFKRALREAYQ-GVLI-YAGRY--NAEKAEQAINDGLADM 318 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC----CHHHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCc----cHHHHHHHHHHCC-CcEE-EeCCC--CHHHHHHHHHCCCcce
Confidence 4567888899999999999999998753211111 1256777887763 4332 34555 678888888887 898
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 319 V~ig 322 (365)
T 2gou_A 319 IGFG 322 (365)
T ss_dssp EECC
T ss_pred ehhc
Confidence 8765
No 228
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=48.37 E-value=1.1e+02 Score=27.93 Aligned_cols=131 Identities=13% Similarity=0.183 Sum_probs=74.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEE-eecCCCC--C-ChHHHHHHHHcCcc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE-ALVPDFR--G-NNGCVREVAKSGLN 234 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie-~l~pd~~--g-~~e~l~~L~~aGld 234 (375)
.+...+.++.+++.|++.||+=--+.+.--| .+...++++.... .| +..+ ++ |.. . ..+.++.|.+.|++
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD--~~~~~~Li~~a~~-~~-vTFHRAF--D~~~~~d~~~ale~L~~lGv~ 148 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVLGILTSNNHID--TEAIEQLLPATQG-LP-LVFHMAF--DVIPKSDQKKSIDQLVALGFT 148 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTTSSBC--HHHHHHHHHHHTT-CC-EEECGGG--GGSCTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeECCCCCcC--HHHHHHHHHHhCC-Ce-EEEECch--hccCCcCHHHHHHHHHHcCCC
Confidence 3444567888999999999875444433344 4444455543321 11 2221 22 111 1 25678999999988
Q ss_pred cc-cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 235 VF-AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 235 v~-~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
.+ .++... ..+..+-++.|+.+.+.. .| ...||.|-|=+.+.+.+. +++.|++.++.....
T Consensus 149 rILTSG~~~-----------~~~a~~g~~~L~~Lv~~a-~~---ri~Im~GgGV~~~Ni~~l---~~~tGv~e~H~s~i~ 210 (224)
T 2bdq_A 149 RILLHGSSN-----------GEPIIENIKHIKALVEYA-NN---RIEIMVGGGVTAENYQYI---CQETGVKQAHGTRIT 210 (224)
T ss_dssp EEEECSCSS-----------CCCGGGGHHHHHHHHHHH-TT---SSEEEECSSCCTTTHHHH---HHHHTCCEEEETTCC
T ss_pred EEECCCCCC-----------CCcHHHHHHHHHHHHHhh-CC---CeEEEeCCCCCHHHHHHH---HHhhCCCEEcccccc
Confidence 65 333211 111333344444444322 12 346999999888877664 345799999986443
No 229
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=48.23 E-value=24 Score=32.94 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++.+..+.+.++|++.|. |||-.....+ |.. +|+++.+... +|+++.+.=. +.+.+..+...|++.+...
T Consensus 129 d~~~ale~L~~lG~~rIL-TSG~~~~a~~-g~~----~L~~Lv~~a~--~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 129 NPLYTLNNLAELGIARVL-TSGQKSDALQ-GLS----KIMELIAHRD--APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp CHHHHHHHHHHHTCCEEE-ECTTSSSTTT-THH----HHHHHHTSSS--CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEE-CCCCCCCHHH-HHH----HHHHHHHhhC--CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 456667888899999986 8876544443 444 4444444333 5665554211 4455666668898877643
No 230
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=47.69 E-value=92 Score=23.81 Aligned_cols=39 Identities=8% Similarity=0.100 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 67 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 105 (137)
T 3hdg_A 67 LEMLDRIKAGGAKPYVIVISAFS--EMKYFIKAIELGVHLF 105 (137)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCC--CHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHhcCCCCcEEEEecCc--ChHHHHHHHhCCccee
Confidence 46778888877888777666654 5667777788887654
No 231
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=47.62 E-value=1.4e+02 Score=28.63 Aligned_cols=170 Identities=15% Similarity=0.191 Sum_probs=95.8
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.+.+..+++++.+.+.--|+-++...-.+ .|...+..+++...+.++.+.|. +.-|+-.+.+.+....++|-.+
T Consensus 27 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~aa~~~~~VPVa-lHlDHg~~~e~i~~ai~~GFtS-- 101 (323)
T 2isw_A 27 NMEQIQGIMKAVVQLKSPVILQCSRGALKY--SDMIYLKKLCEAALEKHPDIPIC-IHLDHGDTLESVKMAIDLGFSS-- 101 (323)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHH--TTTHHHHHHHHHHHHHCTTSCEE-EEEEEECSHHHHHHHHHTTCSE--
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHh--CCHHHHHHHHHHHHHhcCCCcEE-EECCCCCCHHHHHHHHHcCCCe--
Confidence 467777888888888887666555432112 23566777887777764455543 4445544778889999998553
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-CCH-------HHHHHHHHHHHHcCCcEE
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-ETP-------DQVVSTMEKVRAAGVDVM 307 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--G-ET~-------ee~~etl~~Lrelgvd~v 307 (375)
+.++.+..=| ..+.+..-++++.||. .|+.+-.- +|. | |+. -+-.+..+++++.|+|.+
T Consensus 102 VMiDgS~~p~------eENi~~Tk~vv~~ah~---~gvsVEaE--LG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~L 170 (323)
T 2isw_A 102 VMIDASHHPF------DENVRITKEVVAYAHA---RSVSVEAE--LGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDAL 170 (323)
T ss_dssp EEECCTTSCH------HHHHHHHHHHHHHHHT---TTCEEEEE--ESCC----------CCCCCHHHHHHHHHHHCCSEE
T ss_pred EEecCCCCCH------HHHHHHHHHHHHHHHH---cCCeEEEE--eCCccCCccCcccccccCCHHHHHHHHHHHCCCEE
Confidence 4455543111 1123445677788887 46554332 244 2 211 124467788889999986
Q ss_pred eeecCCCCCCCCCCcc--ccCCHH---HHHHHHHHHHHhhhhhhccc
Q 017200 308 TFGQYMRPSKRHMPVS--EYITPE---AFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 308 ~i~qYl~P~~~~~~v~--~~v~pe---~~~~l~~~a~~~gf~~~~sg 349 (375)
-+. + ++-|-.-. . .|. .|++|+++....++-.|.=|
T Consensus 171 Ava-i---Gt~HG~Yk~~~--~p~~~L~~~~L~~I~~~~~vpLVlHG 211 (323)
T 2isw_A 171 AVA-I---GTSHGAYKFKS--ESDIRLAIDRVKTISDLTGIPLVMHG 211 (323)
T ss_dssp EEC-S---SCCSSSBCCCC------CCCCHHHHHHHHHHCSCEEECS
T ss_pred EEe-c---CccccccCCCC--CcccccCHHHHHHHHHHhCCCeEEEC
Confidence 653 1 12221111 1 011 26677777777776555433
No 232
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=47.61 E-value=53 Score=29.48 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=46.8
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+.+.++.+.+.|+.+|.+|+.+++.-. .|.+ .++++.|++.. ++.|-+. +... +.+.+..++++|+|.+-.
T Consensus 157 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia~-GGI~-~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIAS-GGAG-KMEHFLEAFLAGADAALA 228 (266)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTTC-SCCC--HHHHHHHGGGC-CSCEEEE-SCCC-SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCc-CCCC--HHHHHHHHHHc-CCCEEEe-CCCC-CHHHHHHHHHcCCHHHHc
Confidence 4667777888999999999987654322 2222 46777777653 3433332 2221 578888888899886544
No 233
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=47.46 E-value=1.6e+02 Score=26.51 Aligned_cols=134 Identities=8% Similarity=0.047 Sum_probs=67.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-e-c----CCCCCChHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-L-V----PDFRGNNGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l-~----pd~~g~~e~l~~L~~ 230 (375)
.+.+|++..++.+.+.|.+-|-+= -|.+.+...+.+.+.++.|++..+.+.|=+ + + +.+.++.+....+..
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElR---vD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 90 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLELR---IDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLIS 90 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEEE---CTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEE---ecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHH
Confidence 356889999998888888766443 122322225667777777776543332211 1 1 123334443333333
Q ss_pred cC-----cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCc--eEEEeEEEecCCC--HHHHHHHHHHHHH
Q 017200 231 SG-----LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGT--LTKTSIMLGCGET--PDQVVSTMEKVRA 301 (375)
Q Consensus 231 aG-----ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl--~tkt~imvGlGET--~ee~~etl~~Lre 301 (375)
.+ +|.+..-+... . .-+...++++.+++ .|. ..+-|- |.+| .+++.+.+..+.+
T Consensus 91 ~~~~~~~~d~iDvEl~~~-------~----~~~~~~~l~~~~~~---~~~kvI~S~Hd---f~~tp~~~el~~~~~~~~~ 153 (238)
T 1sfl_A 91 DLANINGIDMIDIEWQAD-------I----DIEKHQRIITHLQQ---YNKEVIISHHN---FESTPPLDELQFIFFKMQK 153 (238)
T ss_dssp HGGGCTTCCEEEEECCTT-------S----CHHHHHHHHHHHHH---TTCEEEEEEEE---SSCCCCHHHHHHHHHHHHT
T ss_pred HHHHhCCCCEEEEEccCC-------C----ChHHHHHHHHHHHh---cCCEEEEEecC---CCCCcCHHHHHHHHHHHHH
Confidence 22 33332211110 0 12233356666666 232 222222 2334 4888999999999
Q ss_pred cCCcEEeee
Q 017200 302 AGVDVMTFG 310 (375)
Q Consensus 302 lgvd~v~i~ 310 (375)
+|.|++.+.
T Consensus 154 ~gaDivKia 162 (238)
T 1sfl_A 154 FNPEYVKLA 162 (238)
T ss_dssp TCCSEEEEE
T ss_pred cCCCEEEEE
Confidence 999988885
No 234
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=46.97 E-value=64 Score=31.33 Aligned_cols=106 Identities=10% Similarity=0.125 Sum_probs=58.6
Q ss_pred CcchHHHHHHHHHhcCCc-----EEEEEeeeCC-----CCC-----c---------ccHHHHHHHHHHHHHhCCCcEEEe
Q 017200 158 DPDEPTNVAEAIASWGLD-----YVVITSVDRD-----DLA-----D---------QGSGHFAQTVRKLKELKPNMLIEA 213 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~-----eIvLTsgdr~-----dl~-----d---------~G~~~~~~lir~Ik~~~p~i~Ie~ 213 (375)
|.+-..+.++++++.|.+ -|-+|.-.-+ +.. + .+.+++..+.+.-++ . ++.+
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~-~-Gi~~-- 94 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKA-N-GFKA-- 94 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHH-T-TCEE--
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHH-c-CCcE--
Confidence 456666777777777876 8889864211 110 0 123333333333333 2 3333
Q ss_pred ecCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHHhcC---------CCCCHHHHHHHHHHHHH
Q 017200 214 LVPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVRD---------HRANFKQSLDVLMMAKD 269 (375)
Q Consensus 214 l~pd~~g~~e~l~~L~~aGldv~~hn-lEtv~-rl~~~mr~---------r~~s~~~~l~vl~~ak~ 269 (375)
++-.| +.+.++.|.+.|+|.|..+ -|..+ .+++.+.. .-++.++++..++.+.+
T Consensus 95 ~st~f--D~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 95 ICTPF--DEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLH 159 (350)
T ss_dssp EEEEC--SHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred EeccC--CHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 33334 7889999999999998775 23233 45555431 23456666666666655
No 235
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=46.83 E-value=23 Score=31.65 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+++.+.++++.+.|++.|.++..+.+.. ..+ ...+.++.|+ .. ++.+ +......+.+.++.+.++|+|.+..
T Consensus 29 ~~~~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~--~~~~~i~~i~-~~-~ipv--i~~Ggi~~~~~~~~~~~~Gad~V~l 101 (241)
T 1qo2_A 29 EKDPVELVEKLIEEGFTLIHVVDLSNAIE-NSG--ENLPVLEKLS-EF-AEHI--QIGGGIRSLDYAEKLRKLGYRRQIV 101 (241)
T ss_dssp SSCHHHHHHHHHHTTCCCEEEEEHHHHHH-CCC--TTHHHHHHGG-GG-GGGE--EEESSCCSHHHHHHHHHTTCCEEEE
T ss_pred CcCHHHHHHHHHHcCCCEEEEeccccccc-CCc--hhHHHHHHHH-hc-CCcE--EEECCCCCHHHHHHHHHCCCCEEEE
Confidence 35788999999999999999986432110 011 1356677776 42 2333 2222333678899999999987754
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 102 g 102 (241)
T 1qo2_A 102 S 102 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 236
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=46.49 E-value=71 Score=32.15 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=47.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCcccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
+++.+++.++++.+.|++.|.|-=-..--. ...+.++|+.|++.. ++.|++ .+-++---......-.++|++.+
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILT----PYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcC----HHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 689999999999999999988741111111 356889999999876 455543 22222111223334456888876
Q ss_pred cc
Q 017200 237 AH 238 (375)
Q Consensus 237 ~h 238 (375)
..
T Consensus 231 D~ 232 (464)
T 2nx9_A 231 DT 232 (464)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 237
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=46.37 E-value=12 Score=37.11 Aligned_cols=80 Identities=10% Similarity=0.068 Sum_probs=50.0
Q ss_pred CCcchHHHHHHHHHh-cCCcEEEEEeeeCCCC----CcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIAS-WGLDYVVITSVDRDDL----ADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~-~G~~eIvLTsgdr~dl----~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
++.+|....++.+.+ .|+++|.+++++.... +..|.....++++.|++..+ .+.|- ..+.+. +.+..+.+.+
T Consensus 261 ~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI-~~GgI~-t~e~Ae~~L~ 338 (419)
T 3l5a_A 261 YTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLI-ASGGIN-SPESALDALQ 338 (419)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEE-ECSSCC-SHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEE-EECCCC-CHHHHHHHHH
Confidence 567899999999999 9999999998754110 00111111245556665543 24332 234432 6778888877
Q ss_pred cCccccccc
Q 017200 231 SGLNVFAHN 239 (375)
Q Consensus 231 aGldv~~hn 239 (375)
. +|.+..+
T Consensus 339 ~-aDlVaiG 346 (419)
T 3l5a_A 339 H-ADMVGMS 346 (419)
T ss_dssp G-CSEEEES
T ss_pred h-CCcHHHH
Confidence 7 8877665
No 238
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=46.23 E-value=83 Score=30.74 Aligned_cols=56 Identities=11% Similarity=0.155 Sum_probs=38.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHHhC-CCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKELK-PNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~--G~~~~~~lir~Ik~~~-p~i~Ie 212 (375)
.+++++.+.++.+.+.|++.+-|.|....+..+. ..+.-.+.|++|++.. |++.|.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~ 182 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFG 182 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEE
Confidence 3578999999999999999999954432222111 1344577888898877 565554
No 239
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=45.86 E-value=80 Score=28.54 Aligned_cols=141 Identities=13% Similarity=0.190 Sum_probs=78.5
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHHhCCCcEEEeecCCC-CCChHHHHHHHHcCcccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF-RGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~----~~~~lir~Ik~~~p~i~Ie~l~pd~-~g~~e~l~~L~~aGldv~~h 238 (375)
+.++++.+.| .+|-.=|-.++++.....+ .+....+.|++.. +.....+-|.+ .-+...++.+++.|...+.-
T Consensus 89 ~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w 166 (254)
T 2iw0_A 89 DTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-GFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDT 166 (254)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCEESEECCGGGCCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCCCHHHHHHHHHcCCeEEEe
Confidence 4566777888 4665555556665432222 2333334454433 34444444432 12788899999999887777
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHH-HHHHHHHHHHcCCcEEeeecCC
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQ-VVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee-~~etl~~Lrelgvd~v~i~qYl 313 (375)
++++.+-.. . ......+.++.++.+.+.. -.-...|++-+ + .|.++ +-+.+..|++.|..++++.+.+
T Consensus 167 ~~d~~Dw~~---~-~~~~i~~~~~~~~~~~~~~---~~~~g~IiL~Hd~~~~t~~~~l~~ii~~lk~~Gy~fvtl~ell 238 (254)
T 2iw0_A 167 NLDTKDYEN---N-KPETTHLSAEKFNNELSAD---VGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECL 238 (254)
T ss_dssp SEECCTTTS---C-STTTHHHHHHHHHHHSCSC---GGGCCEEEEECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHT
T ss_pred CCCCcccCc---C-ChHHHHHHHHHHHHHHhhc---CCCCCEEEEEcCCCcccHHHHHHHHHHHHHHCCCEEEEHHHhh
Confidence 777655211 1 1122223333343322211 00133567777 3 24444 4568899999999999998776
No 240
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=45.79 E-value=52 Score=29.40 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=46.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
++.+++.+.++.+.+.|++.|....|- ..+|+. .+.++.+++.. +.+.|-+.- +.. +.+.+..+.++|.|.
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~----~~gga~--~~~i~~v~~~v~~~ipVia~G-GI~-t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGF----APRGTT--LEEVRLIKSSAKGRIKVKASG-GIR-DLETAISMIEAGADR 200 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSC----SSSCCC--HHHHHHHHHHHTTSSEEEEES-SCC-SHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCC----CCCCCC--HHHHHHHHHHhCCCCcEEEEC-CCC-CHHHHHHHHHhCchH
Confidence 677889999999999999999433332 112221 34555665543 356665443 332 566777777899996
Q ss_pred cc
Q 017200 236 FA 237 (375)
Q Consensus 236 ~~ 237 (375)
+.
T Consensus 201 iG 202 (225)
T 1mzh_A 201 IG 202 (225)
T ss_dssp EE
T ss_pred HH
Confidence 53
No 241
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=45.78 E-value=60 Score=34.58 Aligned_cols=78 Identities=13% Similarity=0.086 Sum_probs=51.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
.+++..++.++++.+.|++.|.|-=-..--. ...+.++|+.|++..|++.|++ .+-++---......-.++|++.
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~----P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~ 333 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLLK----PTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADV 333 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCCC----HHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCcC----HHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCE
Confidence 4789999999999999999988762111111 3568899999999888776654 2222211122333445789987
Q ss_pred ccc
Q 017200 236 FAH 238 (375)
Q Consensus 236 ~~h 238 (375)
+..
T Consensus 334 VD~ 336 (718)
T 3bg3_A 334 VDV 336 (718)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 242
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=45.65 E-value=2.1e+02 Score=27.45 Aligned_cols=144 Identities=13% Similarity=0.042 Sum_probs=0.0
Q ss_pred CcchHHHHHHHHHhcCCc-EEEEEee--eCCCCCccc--HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 158 DPDEPTNVAEAIASWGLD-YVVITSV--DRDDLADQG--SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~-eIvLTsg--dr~dl~d~G--~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
++++..+.++.+.+.|+. +|.|--+ +.+.+.+.+ .+.+.++++++++....-..--+.|++. ..+..+.+.++|
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~-~~~~a~~~~~ag 217 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFD-IVHFDQAAAIFN 217 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCC-HHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHhC
Q ss_pred ccccc-------------ccccch----HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHH
Q 017200 233 LNVFA-------------HNIETV----EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVST 295 (375)
Q Consensus 233 ldv~~-------------hnlEtv----~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~et 295 (375)
.+.+. ..-++. ...+.-+. ..+.+...++.+..+++..+..+++ |-.|=-.|.+|..+.
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlS-G~ai~p~a~~~v~~i~~~~~~~ipI---Ig~GGI~s~~da~~~ 293 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIG-GDYVKPTALANVHAFYKRLNPSIQI---IGTGGVXTGRDAFEH 293 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEE-EGGGHHHHHHHHHHHHTTSCTTSEE---EEESSCCSHHHHHHH
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcC-CccccHHHHHHHHHHHHHcCCCCcE---EEECCCCChHHHHHH
Q ss_pred HHHHHHcCCcEEeee
Q 017200 296 MEKVRAAGVDVMTFG 310 (375)
Q Consensus 296 l~~Lrelgvd~v~i~ 310 (375)
+. .|.|.|-++
T Consensus 294 l~----aGAd~V~ig 304 (345)
T 3oix_A 294 IL----CGASMVQIG 304 (345)
T ss_dssp HH----HTCSEEEES
T ss_pred HH----hCCCEEEEC
No 243
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=45.54 E-value=68 Score=31.13 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=50.8
Q ss_pred EEeEEEec--CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 278 KTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 278 kt~imvGl--GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
..-+|.|. .|+.+...+..+.+++.|.+.+-+ |++.|-+....... .-.+.++.+++++.+.|...+.
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~-q~fKprTs~~~f~g-lg~egl~~l~~~~~e~Gl~~~t 175 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRG-GAYKPRTSPYSFQG-LGEKGLEYLREAADKYGMYVVT 175 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEEC-BSCCCCCSTTSCCC-CTHHHHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeee-eEEeCCCChHhhcC-CCHHHHHHHHHHHHHcCCcEEE
Confidence 46688888 899999999999999999999887 56666221111111 2357899999999999987753
No 244
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=45.48 E-value=86 Score=30.45 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=50.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCC---cEEEe-ecCCCCCChHHHHHHHHcC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~---i~Ie~-l~pd~~g~~e~l~~L~~aG 232 (375)
-+++.+++.++++.+.|++.|.|-=-..--. ...+.++|+.+++..|+ +.|++ .+-|+---......-.++|
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aG 229 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSI----PYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGG 229 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCC----HHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhC
Confidence 5688999999999999999887752111111 45688999999998886 66654 3323310122223334689
Q ss_pred ccccccc
Q 017200 233 LNVFAHN 239 (375)
Q Consensus 233 ldv~~hn 239 (375)
++.+...
T Consensus 230 a~~vd~t 236 (370)
T 3rmj_A 230 ARQVECT 236 (370)
T ss_dssp CCEEEEB
T ss_pred CCEEEEe
Confidence 8877553
No 245
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.39 E-value=78 Score=30.67 Aligned_cols=81 Identities=16% Similarity=0.243 Sum_probs=53.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeee--CCCC-------Cccc---H---HHHHHHHHHHHHhCC-CcEEEeecCCCCC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVD--RDDL-------ADQG---S---GHFAQTVRKLKELKP-NMLIEALVPDFRG 220 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgd--r~dl-------~d~G---~---~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g 220 (375)
++.+++.+.|+.+.+.|++.|++++.. +.+. ..+| . ..-.++|+.|++..+ ++.|-.. +...
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~-GGI~- 308 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV-GGVS- 308 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE-SSCC-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEE-CCCC-
Confidence 455689999999999999999998654 2211 0122 1 123578889988764 4555433 3332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017200 221 NNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hn 239 (375)
+.+.+.++..+|.|.+..+
T Consensus 309 s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 309 SGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp SHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 5666777777999877654
No 246
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=45.37 E-value=36 Score=29.48 Aligned_cols=74 Identities=11% Similarity=0.146 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeee-CCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVD-RDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgd-r~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
++++.+.++.+.+.|+++|.+..+- ....+.. -.+.++.|++..|++.|.+ .+.. +.+.+..+.++|.|.+-
T Consensus 113 ~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~----~~~~i~~l~~~~~~~~i~~-~gGI--~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADMLAVHTGTDQQAAGRK----PIDDLITMLKVRRKARIAV-AGGI--SSQTVKDYALLGPDVVI 185 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCC----SHHHHHHHHHHCSSCEEEE-ESSC--CTTTHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCCCcccccCCC----CHHHHHHHHHHcCCCcEEE-ECCC--CHHHHHHHHHcCCCEEE
Confidence 4567778888889999998664221 0000000 1467788888776666654 3333 46778999999999775
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 186 vG 187 (211)
T 3f4w_A 186 VG 187 (211)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 247
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=45.14 E-value=39 Score=30.86 Aligned_cols=140 Identities=13% Similarity=0.154 Sum_probs=86.4
Q ss_pred cEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHh-CC--------CCce--E
Q 017200 209 MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY-VP--------AGTL--T 277 (375)
Q Consensus 209 i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~-~p--------~Gl~--t 277 (375)
..+-+..|+...+.+.++.+.++|.|.+-.++ . .+.+.+..+++++.+++. .| ..+. +
T Consensus 10 ~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~----------S-~g~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i~~gv 78 (234)
T 2f6u_A 10 RHITKLDPDRTNTDEIIKAVADSGTDAVMISG----------T-QNVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYDV 78 (234)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTTTCSEEEECC----------C-TTCCHHHHHHHHHHHTTSCCCEEECCSSCCCCCCCS
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECC----------C-CCCCHHHHHHHHHHhcCCCCCEEEecCCcchhhcCC
Confidence 45666778776678899999999999987776 1 467788888888888862 12 1110 1
Q ss_pred EEeEEEec-CCCHHHHH-----HHHHHH----HHcC-----CcEEeeecC--CCCCCC------CCCccccCCHHHHHHH
Q 017200 278 KTSIMLGC-GETPDQVV-----STMEKV----RAAG-----VDVMTFGQY--MRPSKR------HMPVSEYITPEAFERY 334 (375)
Q Consensus 278 kt~imvGl-GET~ee~~-----etl~~L----relg-----vd~v~i~qY--l~P~~~------~~~v~~~v~pe~~~~l 334 (375)
..-|+.=+ -|..++++ +.+..+ ++.| ++.|+.+ | +.|+.+ ..+. ..|++.+.|
T Consensus 79 Dg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~g-Yil~~P~~~~~rl~~g~~~---~~~e~~~~~ 154 (234)
T 2f6u_A 79 DYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEG-YIVLNPDSAVARVTKALCN---IDKELAASY 154 (234)
T ss_dssp SEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEE-EEECCTTSHHHHHTTBCCC---CCHHHHHHH
T ss_pred CEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecc-eEEECCCCceEEeecCCCC---CCHHHHHHH
Confidence 22233344 56666666 555333 7778 8888864 3 245321 1111 257788888
Q ss_pred HHHHHHh---hhhhhccchhhhhhcchhHHHHHHHHh
Q 017200 335 RALGMEM---GFRYVASGPMVRSSYKVVGWCYYLIFN 368 (375)
Q Consensus 335 ~~~a~~~---gf~~~~sgp~vrssy~a~~~~~~~~~~ 368 (375)
.+.+.++ ||-|..+ --+ .....+++.|.+
T Consensus 155 a~~g~~~l~~~~Vyl~~-~G~----~~~~~~i~~i~~ 186 (234)
T 2f6u_A 155 ALVGEKLFNLPIIYIEY-SGT----YGNPELVAEVKK 186 (234)
T ss_dssp HHHHHHTTCCSEEEEEC-TTS----CCCHHHHHHHHH
T ss_pred HHhhhhhcCCCEEEEeC-CCC----cchHHHHHHHHH
Confidence 8888754 8888765 111 224556666544
No 248
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=44.76 E-value=1.8e+02 Score=27.64 Aligned_cols=149 Identities=15% Similarity=0.089 Sum_probs=82.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (375)
.++++..+.|+.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |..+ +. +.++.|.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~----~--~~~~~e~v~avr~a~G~d~~l~v---Dan~~~~~~~a~~~~~~l~ 215 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRP----D--LKEDVDRVSALREHLGDSFPLMV---DANMKWTVDGAIRAARALA 215 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS----S--HHHHHHHHHHHHHHHCTTSCEEE---ECTTCSCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCC----C--HHHHHHHHHHHHHHhCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 4688899999999999999888765532 1 344578889988865 5555432 1111 22 2344455
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+.|++.+ |-- + +..++ +.++.+++.. +++ |+ .+|+.....+..+.+++-.+|+|.+
T Consensus 216 ~~~i~~i----EqP------~--~~~d~----~~~~~l~~~~--~iP----I~--~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 216 PFDLHWI----EEP------T--IPDDL----VGNARIVRES--GHT----IA--GGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp GGCCSEE----ECC------S--CTTCH----HHHHHHHHHH--CSC----EE--ECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred hcCCCEE----ECC------C--CcccH----HHHHHHHhhC--CCC----EE--eCCCCCCHHHHHHHHHcCCCCEEee
Confidence 5555543 210 1 12333 3344444421 122 22 2344333334444555666787765
Q ss_pred ecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 310 ~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
- +. .+- -..+..++..+|++.|...+..+
T Consensus 272 k----~~----~~G---Gi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 272 D----VS----NIG---GYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp C----TT----TTT---SHHHHHHHHHHHHHTTCCEEECS
T ss_pred C----cc----ccC---CHHHHHHHHHHHHHcCCeEcccc
Confidence 2 21 111 14567778888888888766554
No 249
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=44.31 E-value=38 Score=30.69 Aligned_cols=138 Identities=9% Similarity=0.127 Sum_probs=72.5
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHHhCCCcEEEeecCCC-CCChHHHHHHHHcCcccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF-RGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~----~~~~lir~Ik~~~p~i~Ie~l~pd~-~g~~e~l~~L~~aGldv~~h 238 (375)
+.++++.+.| .+|-.=|-.++++.....+ .+....+.|++....-.+..+-|.+ .-+...++.+++.|...+.-
T Consensus 98 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w 176 (247)
T 2j13_A 98 DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFSERTLALTKEMGYYNVFW 176 (247)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEECHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCCHHHHHHHHHCCCEEEec
Confidence 4566777888 4665555556665433222 2333334454443211122333321 11678899999999887766
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEeeecCCC
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYMR 314 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee~~etl~~Lrelgvd~v~i~qYl~ 314 (375)
++++.+-.... ..+.+. +++.+.+....| .||+-+ + .|.+.+-+.+..|++.|..++++.+++.
T Consensus 177 svd~~Dw~~~~----~~~~~~---~~~~v~~~~~~G-----~IiL~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~ell~ 243 (247)
T 2j13_A 177 SLAFLDWKVDE----QRGWQY---AHNNVMTMIHPG-----SILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVK 243 (247)
T ss_dssp SEECCCC-------------------------CCTT-----BEEEECCCSTTHHHHHHHHHHHHHHTTCEEECHHHHHH
T ss_pred CcccCcCCCCC----CCCHHH---HHHHHHHhcCCC-----eEEEEeCCcHhHHHHHHHHHHHHHHCCCEEEEhHHhhc
Confidence 66655411110 011111 122222211123 467766 2 5778888899999999999999977653
No 250
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=44.09 E-value=1.8e+02 Score=26.14 Aligned_cols=70 Identities=19% Similarity=0.288 Sum_probs=43.0
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCC-----------CcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDL-----------ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl-----------~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
..++.++..|+..|.|.=.|.-+. .|-|...-..+.+.|++.+|.+.|+.....+ +.+.+..+.+ +
T Consensus 42 ~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~--~~~~~~~~~~-~ 118 (251)
T 1zud_1 42 PAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL--TGEALKDAVA-R 118 (251)
T ss_dssp HHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC--CHHHHHHHHH-H
T ss_pred HHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC--CHHHHHHHHh-c
Confidence 457889999999887764332111 1123344455667788889999998776544 4455555443 3
Q ss_pred cccc
Q 017200 233 LNVF 236 (375)
Q Consensus 233 ldv~ 236 (375)
.|++
T Consensus 119 ~DvV 122 (251)
T 1zud_1 119 ADVV 122 (251)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 4543
No 251
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=43.94 E-value=34 Score=33.35 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=50.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv 235 (375)
.+.++..+.++++.+.|+++|.+.++.....+.+ . ..+.++.|++..+ +.|- ..+++ +.+..+.+.+.| +|.
T Consensus 252 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~--~~~~~~~ik~~~~-iPvi-~~Ggi--~~~~a~~~l~~g~aD~ 324 (377)
T 2r14_A 252 EPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-Y--PEGFREQMRQRFK-GGLI-YCGNY--DAGRAQARLDDNTADA 324 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC------C-C--CTTHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-c--hHHHHHHHHHHCC-CCEE-EECCC--CHHHHHHHHHCCCceE
Confidence 4567888999999999999999988643211111 0 2356677877663 4332 34555 578888888877 888
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 325 V~ig 328 (377)
T 2r14_A 325 VAFG 328 (377)
T ss_dssp EEES
T ss_pred Eeec
Confidence 7764
No 252
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=43.68 E-value=2e+02 Score=26.59 Aligned_cols=115 Identities=23% Similarity=0.331 Sum_probs=67.8
Q ss_pred HHHHHHHHhcCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccccc
Q 017200 163 TNVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (375)
Q Consensus 163 ~~~a~al~~~G~-~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlE 241 (375)
..+++.+.+.|. +.++++|-+ .+.++.+++..|.+.+..+.+ +.+.+..+...|.+.... +.
T Consensus 145 ~~v~~~l~~~~~~~~vii~Sf~------------~~~l~~~~~~~p~~~~~~l~~----~~~~l~~~~~~g~~~~~~-~~ 207 (292)
T 3mz2_A 145 ERTAQLITDMQAEPYVMITVHD------------GASARFFYEKNPNFMFEAFVK----TKEAVQDYEDNGIPWSHI-MA 207 (292)
T ss_dssp HHHHHHHHHTTCTTTEEEEESS------------HHHHHHHHHHCTTCCEEEECC----SHHHHHHHHHTTCCGGGE-EE
T ss_pred HHHHHHHHHcCCCCCEEEEECC------------HHHHHHHHHHCCCCeEEEEeC----CHHHHHHHHHhCCChhhe-ee
Confidence 344555666676 677777642 245677778889887776654 456677777777542110 00
Q ss_pred chHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-----CHHHHHHHHHHHHHcCCcEEee
Q 017200 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-----TPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 242 tv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-----T~ee~~etl~~Lrelgvd~v~i 309 (375)
. +. ...+. ..-+.++.+|+ .|+.+...- .+. ...+-.+.+..|.+.|||.|.-
T Consensus 208 ~-------~~-~~~~~-~~~~~V~~ah~---~G~~V~vWT---v~t~d~~~~~~~~~~~~~~L~~~GVDgIiT 265 (292)
T 3mz2_A 208 Y-------VG-PKITP-EVREVIDMLHE---RGVMCMIST---APSDDKLSTPESRAEAYRMIIRQGVDIIES 265 (292)
T ss_dssp E-------EE-SSCCH-HHHHHHHHHHH---TTBCEEEEC---TTTGGGSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred e-------ec-ccccc-cCHHHHHHHHH---CCCEEEEEe---CCCcchhhhccccHHHHHHHHHcCCCEEEe
Confidence 0 11 12222 22467888998 577654421 222 2234467889999999998854
No 253
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=43.55 E-value=1.7e+02 Score=25.63 Aligned_cols=120 Identities=10% Similarity=0.077 Sum_probs=72.2
Q ss_pred CcEEEeecCCCCC--ChHHHHHHHHcCcccccccccch-HHHHH-HhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE
Q 017200 208 NMLIEALVPDFRG--NNGCVREVAKSGLNVFAHNIETV-EELQS-AVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML 283 (375)
Q Consensus 208 ~i~Ie~l~pd~~g--~~e~l~~L~~aGldv~~hnlEtv-~rl~~-~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv 283 (375)
.+.+.+.+-.+.. -.+.++.++++|.+.+....... ..-+. ..-+...+.+..-++.+.+++ .|+.+.+. -.
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~gl~i~~~-~~ 84 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAAS---KGIKIVGT-GV 84 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHH---TTCEEEEE-EE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHH---cCCeEEEE-ec
Confidence 4666655433321 36788999999988765542210 00000 000122344455555555666 57765433 33
Q ss_pred ecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 284 GCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 284 GlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
....+.+++.+.++...++|+..|.+. |+ .+.++.+.++|.+.|...+
T Consensus 85 ~~~~~~~~~~~~i~~A~~lGa~~v~~~----~~-----------~~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 85 YVAEKSSDWEKMFKFAKAMDLEFITCE----PA-----------LSDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp ECCSSTTHHHHHHHHHHHTTCSEEEEC----CC-----------GGGHHHHHHHHHHHTCEEE
T ss_pred cCCccHHHHHHHHHHHHHcCCCEEEec----CC-----------HHHHHHHHHHHHHhCCEEE
Confidence 456788899999999999999998884 32 2456778888888777543
No 254
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.43 E-value=40 Score=34.91 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=53.0
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCC-CC----cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~d-l~----d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
..+.++..+.++++.+.|+++|.+.++.... .+ ..+..++.+.++.|++.. ++.|- ..+.+. +.+..+.+.+
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi-~~Ggi~-~~~~a~~~l~ 300 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV-SLPLV-TTNRIN-DPQVADDILS 300 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEE-ECSSCC-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc-CceEE-EeCCCC-CHHHHHHHHH
Confidence 3677889999999999999999998764321 11 011223567788887755 23332 223332 6778888888
Q ss_pred cC-ccccccc
Q 017200 231 SG-LNVFAHN 239 (375)
Q Consensus 231 aG-ldv~~hn 239 (375)
.| +|.+..+
T Consensus 301 ~g~aD~V~~g 310 (671)
T 1ps9_A 301 RGDADMVSMA 310 (671)
T ss_dssp TTSCSEEEES
T ss_pred cCCCCEEEeC
Confidence 87 8877665
No 255
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=43.15 E-value=82 Score=28.18 Aligned_cols=136 Identities=11% Similarity=0.112 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHHhCCCcE-EEeecCCC-CCChHHHHHHHHcCccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNML-IEALVPDF-RGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~----~~~~lir~Ik~~~p~i~-Ie~l~pd~-~g~~e~l~~L~~aGldv~~ 237 (375)
+.++++.+.| .+|-.=|-.+.++.....+ .+....+.|++... .. +..+-|.+ .-+...++.+++.|...+.
T Consensus 86 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G-~~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~ 163 (240)
T 1ny1_A 86 QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITG-KQDNLYLRPPRGVFSEYVLKETKRLGYQTVF 163 (240)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS-CCCCCEECCGGGEECHHHHHHHHHTTCEEBC
T ss_pred HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhC-CCCCcEEeCCCCCCCHHHHHHHHHcCCEEEE
Confidence 4566777888 4665555556655433222 23333344544321 22 23333322 1167889999999988776
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
-++++.+-.. . ...+.+.. ++.+.+....| +||+-+ + .|.+.+-+.+..|++.|..++++.+.+
T Consensus 164 w~~d~~Dw~~---~-~~~~~~~~---~~~v~~~~~~g-----~Iil~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~el~ 230 (240)
T 1ny1_A 164 WSVAFVDWKI---N-NQKGKKYA---YDHMIKQAHPG-----AIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLM 230 (240)
T ss_dssp CSBCCSCCCG---G-GCCCHHHH---HHHHHHTCCTT-----EEEEECSCSTTHHHHHHHHHHHHHHHTCEEECHHHHH
T ss_pred CcccccccCC---c-CCCCHHHH---HHHHHhCCCCC-----eEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEhHHhh
Confidence 6666544111 0 11233332 23333322123 366666 3 577888889999999999999987554
No 256
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=43.07 E-value=52 Score=32.48 Aligned_cols=130 Identities=14% Similarity=0.153 Sum_probs=72.5
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
.+.++++.+.|++.|+|.+.... ...+.+.|+.+++.+ ++.|-+ +.. .+.+..+.+.++|+|.+-.+.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~------~~~~~e~I~~ik~~~-~i~Vi~--g~V-~t~e~A~~a~~aGAD~I~vG~g~ 215 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH------SLNIIRTLKEIKSKM-NIDVIV--GNV-VTEEATKELIENGADGIKVGIGP 215 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS------BHHHHHHHHHHHTTC-CCEEEE--EEE-CSHHHHHHHHHTTCSEEEECC--
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC------cccHHHHHHHHHhcC-CCeEEE--eec-CCHHHHHHHHHcCCCEEEEeCCC
Confidence 57788899999999988544321 245788999998876 343321 111 16788999999999987665431
Q ss_pred hH-HHHHHhcCC-CCCHHHHHHHHHHHHHhCCCCceEEE-eEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 243 VE-ELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKT-SIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 243 v~-rl~~~mr~r-~~s~~~~l~vl~~ak~~~p~Gl~tkt-~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
-. ...+.+..- ..++.-..++.+.+++ .++++-+ +- + -+.+|+...+ .+|.+.|-+|..|
T Consensus 216 Gs~~~tr~~~g~g~p~~~al~~v~~~~~~---~~IPVIA~GG---I-~~~~di~kal----alGAd~V~vGt~f 278 (400)
T 3ffs_A 216 GSICTTRIVAGVGVPQITAIEKCSSVASK---FGIPIIADGG---I-RYSGDIGKAL----AVGASSVMIGSIL 278 (400)
T ss_dssp -------CCSCBCCCHHHHHHHHHHHHTT---TTCCEEEESC---C-CSHHHHHHHH----TTTCSEEEECGGG
T ss_pred CcCcccccccccchhHHHHHHHHHHHHHh---cCCCEEecCC---C-CCHHHHHHHH----HcCCCEEEEChHH
Confidence 11 111111100 1122222233333322 1343322 11 1 4778887766 4699998888665
No 257
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=43.06 E-value=2.9e+02 Score=28.27 Aligned_cols=137 Identities=12% Similarity=0.114 Sum_probs=79.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc--Ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (375)
.+++++++.|++..+.|.+-|-|=-|. +.. ...+.+..++..|++.. ++.|.+=+ + +.+.++.-.++ |.+
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~-~~v--~~~ee~~rvv~~i~~~~-~vpisIDT--~--~~~v~eaal~~~~G~~ 408 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGI-ESQ--IDVRYVEKIVQTLPYVS-NVPLSLDI--Q--NVDLTERALRAYPGRS 408 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSS-GGG--SCHHHHHHHHHHHHHHT-CSCEEEEC--C--CHHHHHHHHHHCSSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC-CCC--CHHHHHHHHHHHHHhhC-CceEEEeC--C--CHHHHHHHHHhcCCCC
Confidence 478999999999999999999876221 111 12566777787776653 34343322 2 67888887777 888
Q ss_pred cccc-cccch--HHHHHH----------hcC---CCCCHHHHHHHH----HHHHHhCCCCce--EEEeEEE---ecCCCH
Q 017200 235 VFAH-NIETV--EELQSA----------VRD---HRANFKQSLDVL----MMAKDYVPAGTL--TKTSIML---GCGETP 289 (375)
Q Consensus 235 v~~h-nlEtv--~rl~~~----------mr~---r~~s~~~~l~vl----~~ak~~~p~Gl~--tkt~imv---GlGET~ 289 (375)
.++- +.+.. +++.+- |+. ...+|++.++.+ +.+.+ .|+. +--+-.+ |+|-..
T Consensus 409 iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~---~Gi~~~IilDPg~~~igfgk~~ 485 (566)
T 1q7z_A 409 LFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILER---HDFSDRVIFDPGVLPLGAEGKP 485 (566)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHH---TTCGGGEEEECCCCCTTTTCCH
T ss_pred EEEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHH---CCCCCcEEEeCCCCcccCcHHH
Confidence 7653 22222 333332 221 123466555544 33444 4664 2333333 666655
Q ss_pred HHHHHHHHHHHHcCC
Q 017200 290 DQVVSTMEKVRAAGV 304 (375)
Q Consensus 290 ee~~etl~~Lrelgv 304 (375)
-++++.++.++++|+
T Consensus 486 ~~~l~~~~~~~~~g~ 500 (566)
T 1q7z_A 486 VEVLKTIEFISSKGF 500 (566)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC
Confidence 667777777777754
No 258
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=42.81 E-value=1.6e+02 Score=25.13 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=45.3
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEE--eecCCCCCChH-HHHHHHHcCc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNG-CVREVAKSGL 233 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie--~l~pd~~g~~e-~l~~L~~aGl 233 (375)
.+.++.++.++++.. |++.+.++-... +. .| .+.|+.|++.+|+..+- +.+-|. .+ .++.+.++|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~--~~-~g----~~~i~~l~~~~~~~~i~~~l~~~di---~~~~~~~a~~~Ga 78 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLI--KA-EG----LSVITAVKKAHPDKIVFADMKTMDA---GELEADIAFKAGA 78 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHH--HH-HC----THHHHHHHHHSTTSEEEEEEEECSC---HHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHH--Hh-hC----HHHHHHHHHhCCCCeEEEEEEecCc---cHHHHHHHHhCCC
Confidence 457888888988877 888888742210 11 12 35788888877654433 333231 33 4788999999
Q ss_pred cccc
Q 017200 234 NVFA 237 (375)
Q Consensus 234 dv~~ 237 (375)
|.+.
T Consensus 79 d~v~ 82 (207)
T 3ajx_A 79 DLVT 82 (207)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9886
No 259
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=42.49 E-value=1.6e+02 Score=27.26 Aligned_cols=123 Identities=19% Similarity=0.202 Sum_probs=71.7
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCc-EEEeecCCCCCChHHHHHHHHcCcccccc-c
Q 017200 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNM-LIEALVPDFRGNNGCVREVAKSGLNVFAH-N 239 (375)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i-~Ie~l~pd~~g~~e~l~~L~~aGldv~~h-n 239 (375)
+.+.++.+++.|++-+++ +|+|. +...++++..++. ++ .|-+..|.- +.+.++.+.+.+.+.+-. .
T Consensus 114 ~~~f~~~~~~aGvdGvIi-----pDlp~---ee~~~~~~~~~~~--gl~~I~lvap~t--~~eri~~i~~~~~gfiY~vs 181 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLI-----ADVPT---NESQPFVAAAEKF--GIQPIFIAPPTA--SDETLRAVAQLGKGYTYLLS 181 (271)
T ss_dssp HHHHHHHHHHHTCCEEEE-----TTSCG---GGCHHHHHHHHHT--TCEEEEEECTTC--CHHHHHHHHHHCCSCEEECC
T ss_pred HHHHHHHHHHCCCCEEEE-----CCCCH---HHHHHHHHHHHHc--CCeEEEEECCCC--CHHHHHHHHHHCCCeEEEEe
Confidence 356678888999988766 57763 3445566666654 34 344555654 568888887776543211 1
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
.- -+.-. + ........+.++.+|+. +..-+++|||= |.|++.+.+ ..+.|.+-+|..
T Consensus 182 ~~---GvTG~-~--~~~~~~~~~~v~~vr~~------~~~Pv~vGfGIst~e~~~~~~----~~gADgvIVGSA 239 (271)
T 3nav_A 182 RA---GVTGA-E--TKANMPVHALLERLQQF------DAPPALLGFGISEPAQVKQAI----EAGAAGAISGSA 239 (271)
T ss_dssp CC--------------CCHHHHHHHHHHHHT------TCCCEEECSSCCSHHHHHHHH----HTTCSEEEESHH
T ss_pred cc---CCCCc-c--cCCchhHHHHHHHHHHh------cCCCEEEECCCCCHHHHHHHH----HcCCCEEEECHH
Confidence 10 01100 1 11123456777888873 24568899987 577765443 467888877743
No 260
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=42.30 E-value=1.2e+02 Score=27.26 Aligned_cols=107 Identities=15% Similarity=0.284 Sum_probs=60.2
Q ss_pred CCCCCcchHHHHH-HHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeec--CCCCC------ChHH
Q 017200 154 PPPPDPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------NNGC 224 (375)
Q Consensus 154 ~~~ld~eEi~~~a-~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd~~g------~~e~ 224 (375)
|.+-..++.++.| +.+.+.|+++||+-|-.... +..+++ ...+ .|-+.+ ..|.. ++|.
T Consensus 31 ~G~eNT~~tl~la~era~e~~Ik~iVVASssG~T-----A~k~~e-------~~~~-~lVvVTh~~GF~~pg~~e~~~e~ 97 (206)
T 1t57_A 31 PGKENTERVLELVGERADQLGIRNFVVASVSGET-----ALRLSE-------MVEG-NIVSVTHHAGFREKGQLELEDEA 97 (206)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSHH-----HHHHHT-------TCCS-EEEEECCCTTSSSTTCCSSCHHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCCHH-----HHHHHH-------HccC-CEEEEeCcCCCCCCCCCcCCHHH
Confidence 3334456666655 55778899999998754310 222222 1122 333332 12221 6899
Q ss_pred HHHHHHcCcccc--cccccchH-HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017200 225 VREVAKSGLNVF--AHNIETVE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (375)
Q Consensus 225 l~~L~~aGldv~--~hnlEtv~-rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tk 278 (375)
.+.|.+.|..++ .|.+..++ .+.++.. +... .+++..+.+.+..|++++
T Consensus 98 ~~~L~~~G~~V~t~tH~lsG~eR~is~kfG--G~~p---~eiiA~tLR~fgqG~KV~ 149 (206)
T 1t57_A 98 RDALLERGVNVYAGSHALSGVGRGISNRFG--GVTP---VEIMAETLRMVSQGFKVC 149 (206)
T ss_dssp HHHHHHHTCEEECCSCTTTTHHHHHHHHHC--SCCH---HHHHHHHHTTTCHHHHHH
T ss_pred HHHHHhCCCEEEEeeccccchhHHHHHhcC--CCCH---HHHHHHHHHHhCCCceEE
Confidence 999999999988 45566777 4455554 3333 345544444555565543
No 261
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=42.06 E-value=1e+02 Score=27.89 Aligned_cols=77 Identities=19% Similarity=0.153 Sum_probs=47.3
Q ss_pred HHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHH
Q 017200 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQ 247 (375)
Q Consensus 168 al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~ 247 (375)
..++.|..+|-.=-|--+|..+.|...+.++.+.++.....+ +++...|+ +...+.....+|+|.+... +.++
T Consensus 120 ~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T--~IlaAS~R-n~~~v~~aa~~G~d~~Tip----~~vl 192 (223)
T 3s1x_A 120 LAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKT--QILVASIR-NPIHVLRSAVIGADVVTVP----FNVL 192 (223)
T ss_dssp HHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCS--EEEEBSCC-SHHHHHHHHHHTCSEEEEC----HHHH
T ss_pred HHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCC--EEEEEeCC-CHHHHHHHHHcCCCEEEeC----HHHH
Confidence 344668888754333334454556665666666666543334 34555565 6778888888999987542 4666
Q ss_pred HHhc
Q 017200 248 SAVR 251 (375)
Q Consensus 248 ~~mr 251 (375)
+++-
T Consensus 193 ~~l~ 196 (223)
T 3s1x_A 193 KSLM 196 (223)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 6665
No 262
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=42.05 E-value=1.8e+02 Score=27.56 Aligned_cols=136 Identities=18% Similarity=0.169 Sum_probs=80.0
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.+.+..+++++.+.+.--|+-++...-.+ .|...+..+++...+.++.+.|- +.-|+-.+.+.+..-.++|-. .
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~aa~~~~~VPVa-lHLDHg~~~e~~~~ai~~GFt--S 100 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKY--MGIDMAVGMVKIMCERYPHIPVA-LHLDHGTTFESCEKAVKAGFT--S 100 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHH--HCHHHHHHHHHHHHHHSTTSCEE-EEEEEECSHHHHHHHHHHTCS--E
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhh--CCHHHHHHHHHHHHHhcCCCcEE-EECCCCCCHHHHHHHHHhCCC--c
Confidence 456777788888888876665555321111 23566777777776654445443 344544467888888888854 3
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHH-----------HHHHHHHHHHHcCC
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPD-----------QVVSTMEKVRAAGV 304 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~e-----------e~~etl~~Lrelgv 304 (375)
+.++.+..=| ..+.+..-++++.||. .|+.+-.- +|. |+.+. +-.+..+++++.|+
T Consensus 101 VMiDgS~~p~------eeNi~~Tk~vv~~ah~---~gvsVEaE--LG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 169 (307)
T 3n9r_A 101 VMIDASHHAF------EENLELTSKVVKMAHN---AGVSVEAE--LGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQV 169 (307)
T ss_dssp EEECCTTSCH------HHHHHHHHHHHHHHHH---TTCEEEEE--ESCCCCC----------CCSCCHHHHHHHHHHHCC
T ss_pred EEEECCCCCH------HHHHHHHHHHHHHHHH---cCCeEEEE--eeeeccccCCcccccccccCCCHHHHHHHHHHHCC
Confidence 4455443111 1134455678888888 46655432 354 22111 23566778888999
Q ss_pred cEEee
Q 017200 305 DVMTF 309 (375)
Q Consensus 305 d~v~i 309 (375)
|.+-+
T Consensus 170 D~LAv 174 (307)
T 3n9r_A 170 DYLAP 174 (307)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98655
No 263
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=41.97 E-value=1.6e+02 Score=28.05 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=54.5
Q ss_pred hHHHHHHHHcCcccccccccc-hHHHHHH-hcC-CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIET-VEELQSA-VRD-HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTM 296 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEt-v~rl~~~-mr~-r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~ee~~etl 296 (375)
.+..+.+.++|.|.+..|.-. ...+... ... --.+.+...++++.+++.. ++++..-+=+|. ..+.++..+.+
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g~~~~~~~~~~~~~a 150 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLGLEGKETYRGLAQSV 150 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESCBTTCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecCcCccccHHHHHHHH
Confidence 345566778899988777532 1122111 000 0114677788888888864 344443333465 34567889999
Q ss_pred HHHHHcCCcEEeee
Q 017200 297 EKVRAAGVDVMTFG 310 (375)
Q Consensus 297 ~~Lrelgvd~v~i~ 310 (375)
+.+.+.|+|.|++.
T Consensus 151 ~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 151 EAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHcCCCEEEEe
Confidence 99999999999885
No 264
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=41.91 E-value=72 Score=30.59 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=41.8
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++++++.+.|++.|.|= .-+ .+.+.+.++.++ +++.|+++- .. +.+.+..+.+.|+|.+..+
T Consensus 242 dea~eAl~aGaD~I~LD---n~~-----~~~l~~av~~l~---~~v~ieaSG-GI--t~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 242 AELEEAISAGADIIMLD---NFS-----LEMMREAVKINA---GRAALENSG-NI--TLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHHTTCSEEEEE---SCC-----HHHHHHHHHHHT---TSSEEEEES-SC--CHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEEC---CCC-----HHHHHHHHHHhC---CCCeEEEEC-CC--CHHHHHHHHHcCCCEEEEC
Confidence 45555667799888772 211 344555555543 568888653 34 7899999999999988654
No 265
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=41.81 E-value=69 Score=30.04 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=46.4
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++++++.+.|++.|.|=- .. .+.+.+.++.++..+|++.|++.- .. +.+.+..+.+.|+|.+..+
T Consensus 205 eea~eal~aGaD~I~LDn-----~~---~~~~~~~v~~l~~~~~~v~ieaSG-GI--t~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDN-----FA---VWQTQTAVQRRDSRAPTVMLESSG-GL--SLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHHGGGCCSEEEEET-----CC---HHHHHHHHHHHHHHCTTCEEEEES-SC--CTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEECC-----CC---HHHHHHHHHHhhccCCCeEEEEEC-CC--CHHHHHHHHhcCCCEEEEC
Confidence 556666678888775432 21 455777888888767778887653 33 6788999999999988654
No 266
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=41.71 E-value=57 Score=31.70 Aligned_cols=88 Identities=8% Similarity=0.205 Sum_probs=49.5
Q ss_pred HHHHHHHcCccccccccc-c--hHHHH-HHhcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeE---EEe--c
Q 017200 224 CVREVAKSGLNVFAHNIE-T--VEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSI---MLG--C 285 (375)
Q Consensus 224 ~l~~L~~aGldv~~hnlE-t--v~rl~-~~mr~r----~~s~~~----~l~vl~~ak~~~p~G-l~tkt~i---mvG--l 285 (375)
..+..+++|.|.+..|.- . .+..+ +..+.| +.+.+. .+++++.+++..+.. +.++.+. .-| -
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 344556788887765421 1 12211 111111 223333 367778888765421 2223221 111 1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 286 GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 286 GET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
|.+.++.++.++.|.+.|+|+|++..
T Consensus 251 ~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 251 DEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 56788999999999999999999963
No 267
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=41.68 E-value=1.8e+02 Score=26.21 Aligned_cols=135 Identities=7% Similarity=0.022 Sum_probs=78.1
Q ss_pred HHHHHHhcCCcEEEEEeeeC--CCCCcccHH----HHHHHHHHHHHhCCCcEEEeecCCC---CCChHHHHHHHHcCccc
Q 017200 165 VAEAIASWGLDYVVITSVDR--DDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF---RGNNGCVREVAKSGLNV 235 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr--~dl~d~G~~----~~~~lir~Ik~~~p~i~Ie~l~pd~---~g~~e~l~~L~~aGldv 235 (375)
.++++.+.| .+|-.=|-.+ .++.....+ .+....+.|++.. +.....+-+.+ .-+.+.++.+++.|...
T Consensus 72 ~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~~~G~~~~~~~~~l~~~G~~~ 149 (254)
T 2vyo_A 72 LYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLS-GTEIRYAAVPICNGQVNSEMYNILTERGVLP 149 (254)
T ss_dssp HHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHH-TSCCCEEECCCBTTEECHHHHHHHHTTTCEE
T ss_pred HHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHH-CCCCeEEeCCccCCCCCHHHHHHHHHCCCEE
Confidence 566777888 5776556666 665432222 2333344454432 12223333222 11688899999999888
Q ss_pred ccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEeeec-
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQ- 311 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee~~etl~~Lrelgvd~v~i~q- 311 (375)
+.-++++.+-..+ +. +++.+.+..... ....|++-+ + .|.+.+-+.++.|++.|+.++++.+
T Consensus 150 v~w~vd~~Dw~~~-------~~-----~~~~v~~~~~~~--~~g~IiL~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~e~ 215 (254)
T 2vyo_A 150 VGYTFCPYDYDDP-------VG-----EFESMIEGSDPK--HHSFIILMHDGQEADTSRLENMVKIGKDKGYRFVNMDEC 215 (254)
T ss_dssp CCCSBCGGGSSSH-------HH-----HHHHHHHTSCTT--TCCEEEEEEGGGGSSCHHHHHHHHHHHHHTCEECCHHHH
T ss_pred EEeccCCcccccc-------hH-----HHHHHHHhcccc--CCCcEEEEeCCchhHHHHHHHHHHHHHHCCCEEEEchHh
Confidence 7777766551110 00 333333321110 012456655 3 6888888999999999999999988
Q ss_pred CCCC
Q 017200 312 YMRP 315 (375)
Q Consensus 312 Yl~P 315 (375)
...+
T Consensus 216 l~~~ 219 (254)
T 2vyo_A 216 LQGY 219 (254)
T ss_dssp TTTC
T ss_pred hhcc
Confidence 6554
No 268
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=41.37 E-value=31 Score=31.74 Aligned_cols=70 Identities=17% Similarity=0.176 Sum_probs=42.4
Q ss_pred hHH-HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC---CcEEEeecCCCCCChHHHHHHHHc--Ccc
Q 017200 161 EPT-NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP---NMLIEALVPDFRGNNGCVREVAKS--GLN 234 (375)
Q Consensus 161 Ei~-~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p---~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (375)
++. +.++.+.++ +.++++|+.+++.... |.+ .+++++|++..| .+.|-+. ++.. +.+.+..+.+. |++
T Consensus 158 ~~~~e~a~~~~~~-a~~il~t~i~~dG~~~-G~d--~eli~~l~~~~~~~~~iPVIas-GGi~-s~ed~~~l~~~~~G~~ 231 (260)
T 2agk_A 158 ELNADTFRELRKY-TNEFLIHAADVEGLCG-GID--ELLVSKLFEWTKDYDDLKIVYA-GGAK-SVDDLKLVDELSHGKV 231 (260)
T ss_dssp EESHHHHHHHTTT-CSEEEEEC-------C-CCC--HHHHHHHHHHHTTCSSCEEEEE-SCCC-CTHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHh-cCEEEEEeeccccCcC-CCC--HHHHHHHHHhhcccCCceEEEe-CCCC-CHHHHHHHHHhcCCCC
Confidence 345 677788889 9999999998764422 222 567888887653 4555433 3332 67888888876 776
Q ss_pred cc
Q 017200 235 VF 236 (375)
Q Consensus 235 v~ 236 (375)
.+
T Consensus 232 gv 233 (260)
T 2agk_A 232 DL 233 (260)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 269
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=41.21 E-value=2e+02 Score=25.76 Aligned_cols=115 Identities=18% Similarity=0.138 Sum_probs=66.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcE-EEeecCC------CC-CChHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNML-IEALVPD------FR-GNNGCVREV 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~-Ie~l~pd------~~-g~~e~l~~L 228 (375)
.+++.+.+.|++..+.|..-|...+ .+.|++|++.. ++. +...--| +. ...+.++.+
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~--------------~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~ 97 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRIEG--------------IDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDAL 97 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES--------------HHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCeEEEECC--------------HHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHH
Confidence 4678899999999999998765421 24577887764 232 2211111 11 134678899
Q ss_pred HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEe
Q 017200 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~ 308 (375)
.++|+|.+... +... .+ . +..-+.++.+++ .|+.+-.++ -|.++. +.+.+.|+|+|.
T Consensus 98 ~~~Gad~V~l~--~~~~----~~--p---~~l~~~i~~~~~---~g~~v~~~v-----~t~eea----~~a~~~Gad~Ig 154 (232)
T 3igs_A 98 AQAGAAIIAVD--GTAR----QR--P---VAVEALLARIHH---HHLLTMADC-----SSVDDG----LACQRLGADIIG 154 (232)
T ss_dssp HHHTCSEEEEE--CCSS----CC--S---SCHHHHHHHHHH---TTCEEEEEC-----CSHHHH----HHHHHTTCSEEE
T ss_pred HHcCCCEEEEC--cccc----CC--H---HHHHHHHHHHHH---CCCEEEEeC-----CCHHHH----HHHHhCCCCEEE
Confidence 99999987532 1100 11 1 223345555555 245443332 355554 456688999985
Q ss_pred e
Q 017200 309 F 309 (375)
Q Consensus 309 i 309 (375)
+
T Consensus 155 ~ 155 (232)
T 3igs_A 155 T 155 (232)
T ss_dssp C
T ss_pred E
Confidence 4
No 270
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=41.08 E-value=85 Score=31.14 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=52.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeC--CCCC-----ccc---H---HHHHHHHHHHHHhCC-CcEEEeecCCCCCCh
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDR--DDLA-----DQG---S---GHFAQTVRKLKELKP-NMLIEALVPDFRGNN 222 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr--~dl~-----d~G---~---~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~ 222 (375)
++.+++.+.|+.+.+.|++-|+++.... .|+. .+| . ..-.++|+.|++..+ ++.|-. .+... +.
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg-~GGI~-s~ 357 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA-SGGIF-SG 357 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE-CSSCC-SH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE-ECCCC-CH
Confidence 4556899999999999999999987543 2321 122 1 233578888887653 454432 33332 56
Q ss_pred HHHHHHHHcCccccccc
Q 017200 223 GCVREVAKSGLNVFAHN 239 (375)
Q Consensus 223 e~l~~L~~aGldv~~hn 239 (375)
+.+.++..+|.|.+..+
T Consensus 358 eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 358 LDALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 66666667999977654
No 271
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=40.53 E-value=81 Score=27.73 Aligned_cols=126 Identities=14% Similarity=0.203 Sum_probs=71.9
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc--
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA-- 237 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~-- 237 (375)
+...+.++.+.+.|++.|+|-.....+ +++ ..+.++++.+++.+|+..+-+-. . +.+.+....++|+|.+.
T Consensus 88 ~~~~~~i~~~~~~Gad~V~l~~~~~~~-~~~--~~~~~~i~~i~~~~~~~~v~~~~-~---t~~ea~~a~~~Gad~i~~~ 160 (234)
T 1yxy_A 88 TATMTEVDQLAALNIAVIAMDCTKRDR-HDG--LDIASFIRQVKEKYPNQLLMADI-S---TFDEGLVAHQAGIDFVGTT 160 (234)
T ss_dssp SCSHHHHHHHHTTTCSEEEEECCSSCC-TTC--CCHHHHHHHHHHHCTTCEEEEEC-S---SHHHHHHHHHTTCSEEECT
T ss_pred CChHHHHHHHHHcCCCEEEEcccccCC-CCC--ccHHHHHHHHHHhCCCCeEEEeC-C---CHHHHHHHHHcCCCEEeee
Confidence 335566778889999988776554321 110 12568889998887766543321 1 45667888899999882
Q ss_pred -ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 238 -HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 238 -hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
++..... +.. ...+ ++.++.+++. +++ ++..=|= |.+++.+. .+.|+|.+-+|..
T Consensus 161 v~g~~~~~---~~~--~~~~----~~~i~~~~~~---~ip----via~GGI~s~~~~~~~----~~~Gad~v~vGsa 217 (234)
T 1yxy_A 161 LSGYTPYS---RQE--AGPD----VALIEALCKA---GIA----VIAEGKIHSPEEAKKI----NDLGVAGIVVGGA 217 (234)
T ss_dssp TTTSSTTS---CCS--SSCC----HHHHHHHHHT---TCC----EEEESCCCSHHHHHHH----HTTCCSEEEECHH
T ss_pred ccccCCCC---cCC--CCCC----HHHHHHHHhC---CCC----EEEECCCCCHHHHHHH----HHCCCCEEEEchH
Confidence 2221100 000 1222 4556666552 232 3332333 47766554 4579999988743
No 272
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=40.44 E-value=80 Score=30.44 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=50.8
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv 235 (375)
.+.++..+.++++.+.|+++|.+.++.....+... .+.++.|++..+ +.|- ..+.+ +.+..+.+.+.| +|.
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~~-iPvi-~~Ggi--t~~~a~~~l~~g~aD~ 319 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERFH-GVII-GAGAY--TAEKAEDLIGKGLIDA 319 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHCC-CCEE-EECCc--CHHHHHHHHHCCCccE
Confidence 35667888899999999999999986432111111 356777877663 3332 33455 678888888887 888
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 320 V~~g 323 (364)
T 1vyr_A 320 VAFG 323 (364)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7764
No 273
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=40.24 E-value=71 Score=30.91 Aligned_cols=51 Identities=10% Similarity=-0.004 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCC-ceEEEeE---EEec--CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 260 SLDVLMMAKDYVPAG-TLTKTSI---MLGC--GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 260 ~l~vl~~ak~~~p~G-l~tkt~i---mvGl--GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.+++++.+++..+.. +.++-+. .-|+ +++.++..+.++.|.+.|+|++++.
T Consensus 214 ~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~ 270 (361)
T 3gka_A 214 LLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFAR 270 (361)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 367778888765431 2222221 1133 2346789999999999999999985
No 274
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=40.09 E-value=2.4e+02 Score=26.48 Aligned_cols=132 Identities=19% Similarity=0.253 Sum_probs=66.7
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecC-CCCCChHHH-HHHHHcCcccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP-DFRGNNGCV-REVAKSGLNVFAHNI 240 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~p-d~~g~~e~l-~~L~~aGldv~~hnl 240 (375)
...++++.+.|+-. .++++ ...+.+.+.. ..++.++...++..+-+... .+ +.+.+ +.+..+|.|.+..|+
T Consensus 76 ~~~a~aa~~~G~~~-~~~~~-~~~l~~~~~~---~~~~~~~~~~~~~pv~~~i~~~~--~~~~~~~~~~~~gad~i~i~~ 148 (349)
T 1p0k_A 76 KSLARAASQAGIPL-AVGSQ-MSALKDPSER---LSYEIVRKENPNGLIFANLGSEA--TAAQAKEAVEMIGANALQIHL 148 (349)
T ss_dssp HHHHHHHHHHTCCE-ECCCC-TTTTTCHHHH---HHHHHHHHHCSSSCEEEEEETTC--CHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHcCCcE-Eeccc-hhcccCcccc---cceehhhhhCCCceeEEeecCCC--CHHHHHHHHHhcCCCeEEecc
Confidence 35567778889765 33332 2223331122 22333444445544433332 33 44444 445567888877766
Q ss_pred cchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 241 Etv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
....+....-. ...++.+++.++.+++..+.-+.+|. +|.|-+.++ ++.+.+.|+|.|.+.
T Consensus 149 ~~~~~~~~~~~--~~~~~~~~~~i~~vr~~~~~Pv~vK~---~~~~~~~~~----a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 149 NVIQEIVMPEG--DRSFSGALKRIEQICSRVSVPVIVKE---VGFGMSKAS----AGKLYEAGAAAVDIG 209 (349)
T ss_dssp CTTTTC----------CTTHHHHHHHHHHHCSSCEEEEE---ESSCCCHHH----HHHHHHHTCSEEEEE
T ss_pred cchhhhcCCCC--CcchHHHHHHHHHHHHHcCCCEEEEe---cCCCCCHHH----HHHHHHcCCCEEEEc
Confidence 54332211111 11222377888888875421122331 266667544 567788999998885
No 275
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=39.18 E-value=40 Score=31.80 Aligned_cols=70 Identities=17% Similarity=0.272 Sum_probs=48.8
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.+.+ ++++++.+.|+++|.|=- . +.+.+.+.++.++..+|.+.+++.-+ . +.+.+..+.+.|+|.+.
T Consensus 199 EV~tl-eea~eA~~aGaD~I~LDn-----~---~~e~l~~av~~l~~~~~~v~ieASGG-I--t~eni~~~a~tGVD~Is 266 (285)
T 1o4u_A 199 EVENL-EDALRAVEAGADIVMLDN-----L---SPEEVKDISRRIKDINPNVIVEVSGG-I--TEENVSLYDFETVDVIS 266 (285)
T ss_dssp EESSH-HHHHHHHHTTCSEEEEES-----C---CHHHHHHHHHHHHHHCTTSEEEEEEC-C--CTTTGGGGCCTTCCEEE
T ss_pred EeCCH-HHHHHHHHcCCCEEEECC-----C---CHHHHHHHHHHhhccCCCceEEEECC-C--CHHHHHHHHHcCCCEEE
Confidence 34443 566667788999886532 2 24567778888877677788876543 3 56788999999999876
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 267 vG 268 (285)
T 1o4u_A 267 SS 268 (285)
T ss_dssp EG
T ss_pred Ee
Confidence 43
No 276
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=39.02 E-value=1.1e+02 Score=23.69 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+.+....++|++.|
T Consensus 83 ~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~ 121 (146)
T 4dad_A 83 LAAIEKLSRLHPGLTCLLVTTDA--SSQTLLDAMRAGVRDV 121 (146)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHTTTEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEeCCC--CHHHHHHHHHhCCcee
Confidence 56788888888888877777654 5677777778887654
No 277
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=38.95 E-value=1.5e+02 Score=27.45 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=52.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEE--eeeC-----CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVIT--SVDR-----DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA 229 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLT--sgdr-----~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~ 229 (375)
-+++|..+.++...+.|...|-+. |+.. ...+....+.+.++++..++..-.+.+++. ..+.++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~------~~~~i~~~~ 237 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAH------GASGIREAV 237 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEEC------SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeC------CHHHHHHHH
Confidence 457888889999989998766554 3311 111111245677777777665322444442 345688888
Q ss_pred HcCcccccccccchHHH
Q 017200 230 KSGLNVFAHNIETVEEL 246 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl 246 (375)
++|++.+.|..-..++.
T Consensus 238 ~~g~~~i~H~~~~~~~~ 254 (403)
T 3gnh_A 238 RAGVDTIEHASLVDDEG 254 (403)
T ss_dssp HTTCSEEEECTTCCHHH
T ss_pred HhCCCEEecCCcCCHHH
Confidence 99999999975443333
No 278
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=38.88 E-value=2.7e+02 Score=27.18 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=27.8
Q ss_pred CCHHHHHHH----HHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc--CCcEEeeecC
Q 017200 255 ANFKQSLDV----LMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA--GVDVMTFGQY 312 (375)
Q Consensus 255 ~s~~~~l~v----l~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel--gvd~v~i~qY 312 (375)
..+++..+. ++.+|+..|. .++-.++ -.|+..+.+.--++.|... .+|+|.+.-|
T Consensus 174 ~~~~~la~ll~ag~~aVR~v~p~-~~V~ih~--~~~~~~~~~~~~~d~l~~~g~d~DvIG~syY 234 (399)
T 1ur4_A 174 TDWAKMSQLFNAGSQAVRETDSN-ILVALHF--TNPETSGRYAWIAETLHRHHVDYDVFASSYY 234 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTT-SEEEEEE--CCTTSTTHHHHHHHHHHHTTCCCSEEEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCC-CeEEEEe--CCCcchHHHHHHHHHHHHcCCCcCeEeEecC
Confidence 345554444 4666776664 4443332 1244433333334445554 4689999534
No 279
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=38.59 E-value=1.1e+02 Score=24.24 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+.+....++|++.|
T Consensus 99 ~~~~~~lr~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 137 (157)
T 3hzh_A 99 ITCLSNIMEFDKNARVIMISALG--KEQLVKDCLIKGAKTF 137 (157)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCcEEEEeccC--cHHHHHHHHHcCCCEE
Confidence 46788888888888776676654 6777888888887754
No 280
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=38.50 E-value=2.6e+02 Score=26.55 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=80.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (375)
.++++..+.+++..+.|++.+-|=-|.. .+.=.+.|++|++.. |++.+.+ |..+ +. +.++.|.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~-------~~~d~~~v~avR~~~g~~~~l~v---DaN~~~~~~~A~~~~~~l~ 208 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGS-------KELDVERIRMIREAAGDSITLRI---DANQGWSVETAIETLTLLE 208 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHHCSSSEEEE---ECTTCBCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCC-------HHHHHHHHHHHHHHhCCCCeEEE---ECCCCCChHHHHHHHHHHh
Confidence 3678999999999999999998865421 233467888898876 6665532 2221 22 2344455
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+.|++.+ |- = +. ..+ ++.++.+++.. +++ | -.||+.....+..+.++.-.+|++.+
T Consensus 209 ~~~i~~i----Eq---P---~~--~~~----~~~~~~l~~~~--~iP----I--a~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 209 PYNIQHC----EE---P---VS--RNL----YTALPKIRQAC--RIP----I--MADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp GGCCSCE----EC---C---BC--GGG----GGGHHHHHHTC--SSC----E--EESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred hcCCCEE----EC---C---CC--hhH----HHHHHHHHhhC--CCC----E--EEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 5454433 21 0 11 111 23344444421 222 2 23455555555555566667788766
Q ss_pred ecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 310 ~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
- |.+ +-. ..+..++..+|.+.|...+.
T Consensus 265 k----~~~----~GG---it~~~~i~~~A~~~gi~~~~ 291 (368)
T 3q45_A 265 K----LSK----SAG---ITNALNIIRLAEQAHMPVQV 291 (368)
T ss_dssp C----TTT----TTS---HHHHHHHHHHHHHTTCCEEE
T ss_pred c----hhh----cCC---HHHHHHHHHHHHHcCCcEEe
Confidence 2 322 111 34567777788888876654
No 281
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=38.49 E-value=75 Score=31.96 Aligned_cols=122 Identities=14% Similarity=0.186 Sum_probs=52.9
Q ss_pred HHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHh------CCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL------KPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~------~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
..+.+.+.++..+.++--+. .+ .|.-...++++.+... ...+.+.+-.+......+.++.+.++|+|++..
T Consensus 171 a~~~m~~~~i~~lpVVDe~g-~l--vGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~i 247 (490)
T 4avf_A 171 MKAKLYENRIEKMLVVDENF-YL--RGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVV 247 (490)
T ss_dssp ---------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEEcCCC-cE--EEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhcccceEEe
Confidence 33445566777666652111 11 1333344555544321 112334333333222467899999999998765
Q ss_pred cccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+.. .......++.++.+++.+|. +. +++|..-|.++ .+.+.+.|+|.|.++
T Consensus 248 d~a------------~g~~~~~~~~v~~i~~~~p~-~~----Vi~g~v~t~e~----a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 248 DTA------------HGHSKGVIERVRWVKQTFPD-VQ----VIGGNIATAEA----AKALAEAGADAVKVG 298 (490)
T ss_dssp ECS------------CCSBHHHHHHHHHHHHHCTT-SE----EEEEEECSHHH----HHHHHHTTCSEEEEC
T ss_pred ccc------------CCcchhHHHHHHHHHHHCCC-ce----EEEeeeCcHHH----HHHHHHcCCCEEEEC
Confidence 311 11235677888999987654 43 34455457655 466788999999985
No 282
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=38.39 E-value=42 Score=31.03 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=44.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~d----l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
|.+..++.|+++++.|++-|.++.-.... ....|.+.+ ..++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl-~~l~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 107 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKAL-RWMREAADEY-GLVT--VTEVM--DTRHVELVAKY-S 107 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECC--CGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHH-HHHHHHHHHc-CCcE--EEeeC--CHHhHHHHHhh-C
Confidence 57889999999999999877766543111 111123333 3344444433 2322 22222 55667778777 8
Q ss_pred ccccccc
Q 017200 234 NVFAHNI 240 (375)
Q Consensus 234 dv~~hnl 240 (375)
|.+..+-
T Consensus 108 d~~kIga 114 (262)
T 1zco_A 108 DILQIGA 114 (262)
T ss_dssp SEEEECG
T ss_pred CEEEECc
Confidence 8887763
No 283
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=38.37 E-value=67 Score=30.36 Aligned_cols=66 Identities=11% Similarity=0.188 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+.+ ++++++.+.|++.|.|= . .. .+.+.+.++.++ +++.++++- .. +.+.+..+.+.|+|.+..
T Consensus 205 v~tl-~ea~eAl~aGaD~I~LD---n--~~---~~~l~~av~~~~---~~v~ieaSG-GI--t~~~i~~~a~tGVD~Isv 269 (287)
T 3tqv_A 205 VTNL-DELNQAIAAKADIVMLD---N--FS---GEDIDIAVSIAR---GKVALEVSG-NI--DRNSIVAIAKTGVDFISV 269 (287)
T ss_dssp ESSH-HHHHHHHHTTCSEEEEE---S--CC---HHHHHHHHHHHT---TTCEEEEES-SC--CTTTHHHHHTTTCSEEEC
T ss_pred eCCH-HHHHHHHHcCCCEEEEc---C--CC---HHHHHHHHHhhc---CCceEEEEC-CC--CHHHHHHHHHcCCCEEEE
Confidence 3444 56666677899988872 2 22 344555555543 567888653 33 678899999999998865
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 270 G 270 (287)
T 3tqv_A 270 G 270 (287)
T ss_dssp S
T ss_pred C
Confidence 4
No 284
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=38.16 E-value=2.8e+02 Score=26.62 Aligned_cols=147 Identities=12% Similarity=0.141 Sum_probs=85.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (375)
.+++++.+.++.+.+.|++.+-|=-|. + .+.-.+.|++|++.. |++.+.+ |..+ +. +.++.|.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~-----~--~~~d~~~v~avR~a~g~d~~l~v---Dan~~~~~~~A~~~~~~l~ 219 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGR-----A--PRKDAANLRAMRQRVGADVEILV---DANQSLGRHDALAMLRILD 219 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-----C--HHHHHHHHHHHHHHHCTTSEEEE---ECTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCC-----C--HHHHHHHHHHHHHHcCCCceEEE---ECCCCcCHHHHHHHHHHHH
Confidence 357899999999999999999886442 1 445678889998876 5665532 2211 22 2345566
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHH-HhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEe
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK-DYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak-~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~ 308 (375)
+.|++.+.-- +. ..+ ++.++.++ +. +++=+-.+|+.....+..+.++.-.+|+|.
T Consensus 220 ~~~i~~iEqP----------~~--~~d----~~~~~~l~~~~--------~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ 275 (389)
T 3ozy_A 220 EAGCYWFEEP----------LS--IDD----IEGHRILRAQG--------TPVRIATGENLYTRNAFNDYIRNDAIDVLQ 275 (389)
T ss_dssp HTTCSEEESC----------SC--TTC----HHHHHHHHTTC--------CSSEEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred hcCCCEEECC----------CC--ccc----HHHHHHHHhcC--------CCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 6665544210 11 223 34455555 41 122333467766666666666667788876
Q ss_pred eecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhcc
Q 017200 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (375)
Q Consensus 309 i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (375)
+- +.+ +-. ..+..++..+|.+.|...+..
T Consensus 276 ik----~~~----~GG---it~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 276 AD----ASR----AGG---ITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp CC----TTT----SSC---HHHHHHHHHHHHHTTCEECCC
T ss_pred eC----ccc----cCC---HHHHHHHHHHHHHcCCEEEec
Confidence 52 221 111 445667777788877765543
No 285
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=38.10 E-value=1.4e+02 Score=23.26 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+.+....++|++.|
T Consensus 77 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 115 (152)
T 3eul_A 77 AQVAAAVRSYELPTRVLLISAHD--EPAIVYQALQQGAAGF 115 (152)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCeEEEEEccC--CHHHHHHHHHcCCCEE
Confidence 46777777777777776666544 5666777778887654
No 286
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=38.06 E-value=1e+02 Score=30.24 Aligned_cols=66 Identities=18% Similarity=0.347 Sum_probs=47.9
Q ss_pred eEEEec--CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 280 SIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 280 ~imvGl--GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
-+|+|- .|+.+...+..+.+++.|++.|-++.| .|-+.... .+-...+.++.|++++.+.|...+.
T Consensus 144 ~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~f-kprts~~~-f~gl~~egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 144 VFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAF-KPRTSPYD-FQGLGLEGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTS-CCCCTHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccc-cCCCChHh-hcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 366665 689999999999999999999988655 45211100 1123457889999999999987653
No 287
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=37.87 E-value=2.2e+02 Score=26.46 Aligned_cols=75 Identities=9% Similarity=0.121 Sum_probs=43.5
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~d----l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
|.+..++.|+++++.|.+.+.++.=..+. +...|.+.+ ..++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl-~~l~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 122 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGL-KLLRRAGDEA-GLPV--VTEVL--DPRHVETVSRY-A 122 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCCE--EEECC--CGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHH-HHHHHHHHHc-CCcE--EEecC--CHHHHHHHHHh-C
Confidence 57888999999999999986654332111 111133333 3444444433 2222 22222 56777778777 8
Q ss_pred cccccc
Q 017200 234 NVFAHN 239 (375)
Q Consensus 234 dv~~hn 239 (375)
|++..+
T Consensus 123 d~~kIg 128 (276)
T 1vs1_A 123 DMLQIG 128 (276)
T ss_dssp SEEEEC
T ss_pred CeEEEC
Confidence 888775
No 288
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=37.82 E-value=2.6e+02 Score=26.22 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=67.8
Q ss_pred HHHHhcCCcEEEEEe-eeC-CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC-----------------------
Q 017200 167 EAIASWGLDYVVITS-VDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN----------------------- 221 (375)
Q Consensus 167 ~al~~~G~~eIvLTs-gdr-~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~----------------------- 221 (375)
+.+++.|+..|.|-= ++. +... ..+++.++++..++.-=.+.+.+-..|+..+
T Consensus 34 ~ilk~~G~n~vRlri~v~P~~g~~--d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~~~ 111 (334)
T 1fob_A 34 TILADAGINSIRQRVWVNPSDGSY--DLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLY 111 (334)
T ss_dssp HHHHHHTCCEEEEEECSCCTTCTT--CHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEEEECCCCCcc--CHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCChHHHHHHHH
Confidence 345678888888721 110 1112 2677888888887753223334322222111
Q ss_pred ---hHHHHHHHHcCc--ccccccccchHHHHHHhcCCC--CCHHHHHHHHHH----HHHhC--CCCceEEEeEEEec--C
Q 017200 222 ---NGCVREVAKSGL--NVFAHNIETVEELQSAVRDHR--ANFKQSLDVLMM----AKDYV--PAGTLTKTSIMLGC--G 286 (375)
Q Consensus 222 ---~e~l~~L~~aGl--dv~~hnlEtv~rl~~~mr~r~--~s~~~~l~vl~~----ak~~~--p~Gl~tkt~imvGl--G 286 (375)
.+.++.|++.|. +.+..+=|...-+ +-+.+ ..+++..+.+.. +|+.. |. +-+|+.+ |
T Consensus 112 ~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~---lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~-----~~v~~h~~~~ 183 (334)
T 1fob_A 112 NYTLEVCNTFAENDIDIEIISIGNEIRAGL---LWPLGETSSYSNIGALLHSGAWGVKDSNLATT-----PKIMIHLDDG 183 (334)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEESSSGGGCS---SBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSC-----CEEEEEESCT
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeecCcccc---cCCCCcchhHHHHHHHHHHHHHHHHHhccCCC-----CeEEEEcCCc
Confidence 256677777663 3343333322111 00111 245666566555 44443 32 2356666 4
Q ss_pred CCHHHHHHHHHHHHHcC------CcEEeeecC
Q 017200 287 ETPDQVVSTMEKVRAAG------VDVMTFGQY 312 (375)
Q Consensus 287 ET~ee~~etl~~Lrelg------vd~v~i~qY 312 (375)
...+.+..-++.+.+.| +|+|.+.-|
T Consensus 184 ~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syY 215 (334)
T 1fob_A 184 WSWDQQNYFYETVLATGELLSTDFDYFGVSYY 215 (334)
T ss_dssp TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECC
T ss_pred CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCC
Confidence 55554444556666655 699999544
No 289
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=37.73 E-value=2.1e+02 Score=27.09 Aligned_cols=167 Identities=16% Similarity=0.117 Sum_probs=94.5
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.+.+..+++++.+.+.--|+-++...-.+ .|...+..+++.+.+ ..+.|. +.-|+-.+.+.+..-.++|-.+
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~~a~--~~VPVa-lHlDHg~~~e~~~~ai~~GFtS-- 98 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILALSEGAMKY--GGRALTLMAVELAKE--ARVPVA-VHLDHGSSYESVLRALRAGFTS-- 98 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHH--HHHHHHHHHHHHHHH--CSSCEE-EEEEEECSHHHHHHHHHTTCSE--
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhh--CCHHHHHHHHHHHHh--CCCcEE-EECCCCCCHHHHHHHHHcCCCe--
Confidence 467777888888888887666555422112 235667778877766 445443 4445544678888888888654
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-CCH----------HHHHHHHHHHHHcCC
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-ETP----------DQVVSTMEKVRAAGV 304 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--G-ET~----------ee~~etl~~Lrelgv 304 (375)
+.++.+..=| ..+.+..-++++.||. .|+.+-.- +|. | |+. -+-.+..+++++.|+
T Consensus 99 VMiDgS~~p~------eENi~~Tk~vv~~ah~---~gvsVEaE--LG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 167 (305)
T 1rvg_A 99 VMIDKSHEDF------ETNVRETRRVVEAAHA---VGVTVEAE--LGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGA 167 (305)
T ss_dssp EEECCTTSCH------HHHHHHHHHHHHHHHH---TTCEEEEE--ESCCCCSCC------CCTTCCCHHHHHHHHHHHCC
T ss_pred eeeCCCCCCH------HHHHHHHHHHHHHHHH---cCCEEEEE--EeeccCccCCccccccccccCCHHHHHHHHHHHCC
Confidence 3455442111 1123445677888887 46544332 244 2 322 124467788889999
Q ss_pred cEEeeecCCCCCCCCCCcc--ccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 305 DVMTFGQYMRPSKRHMPVS--EYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 305 d~v~i~qYl~P~~~~~~v~--~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
|.+-+. + ++-|-.-. .. ..=.|++|+++.....+-.|.
T Consensus 168 D~LAva-i---Gt~HG~Yk~~g~-p~L~~~~L~~I~~~~~vpLVl 207 (305)
T 1rvg_A 168 DYLAVA-I---GTSHGAYKGKGR-PFIDHARLERIARLVPAPLVL 207 (305)
T ss_dssp SEEEEC-S---SCCSSSBCSSSS-CCCCHHHHHHHHHHCCSCEEE
T ss_pred CEEEEe-c---CccccccCCCCC-CccCHHHHHHHHHhcCCCEEE
Confidence 986652 1 12221111 10 011477788887777665554
No 290
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=37.71 E-value=2.7e+02 Score=26.39 Aligned_cols=143 Identities=14% Similarity=0.061 Sum_probs=80.3
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--ChH-HHH---HHHH
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG-CVR---EVAK 230 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~e-~l~---~L~~ 230 (375)
++++..+.|+.+.+.|++.|-|=.+. + .+.-.+.|++|++.. |++.|.+ |..+ +.+ .++ .|.+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-----~--~~~~~e~v~avr~a~g~d~~l~v---Dan~~~~~~~a~~~~~~l~~ 214 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-----D--WQSDIDRIRACLPLLEPGEKAMA---DANQGWRVDNAIRLARATRD 214 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-----C--HHHHHHHHHHHGGGSCTTCEEEE---ECTTCSCHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-----C--HHHHHHHHHHHHHhcCCCCEEEE---ECCCCCCHHHHHHHHHHHHh
Confidence 57889999999999999999886553 1 345678899998877 4665543 2211 322 223 3333
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|+ . +|- +-. .++.++.+++.. +++ |+ .+|+.....+..+.+++-.+|+|.+-
T Consensus 215 ~~i-~----iE~----------P~~----~~~~~~~l~~~~--~iP----I~--~de~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 215 LDY-I----LEQ----------PCR----SYEECQQVRRVA--DQP----MK--LDECVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp SCC-E----EEC----------CSS----SHHHHHHHHTTC--CSC----EE--ECTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CCe-E----EeC----------CcC----CHHHHHHHHhhC--CCC----EE--EeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 333 2 331 111 245555666521 122 32 23443334444445566678888774
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhcc
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (375)
|.+-+ -..+..++..+|++.|...+.+
T Consensus 268 ----~~~~G-------Git~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 268 ----ISNLG-------GLSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp ----TTTTT-------SHHHHHHHHHHHHHTTCCEEEE
T ss_pred ----ccccC-------CHHHHHHHHHHHHHcCCeEEEe
Confidence 32211 1445667777788777765544
No 291
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=37.46 E-value=1.4e+02 Score=26.69 Aligned_cols=105 Identities=17% Similarity=0.171 Sum_probs=61.5
Q ss_pred HHHHHHHhcCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
.+++.+.+.|. +.++++|-+ .+.++.+++..|++.+..+..... .+....+...|++.+......
T Consensus 133 ~v~~~l~~~~~~~~vii~SF~------------~~~l~~~~~~~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~~~ 198 (252)
T 2pz0_A 133 KLIKAIKEYNFEERVIISSFN------------HYSLRDVKKMAPHLKIGLLYQCGL--VEPWHMALRMEAYSLHPFYFN 198 (252)
T ss_dssp HHHHHHHHTTCTTTEEEEESB------------HHHHHHHHHHCTTSEEEEEECSBC--SSTHHHHHHTTCSEEEEBGGG
T ss_pred HHHHHHHhcCCCCCEEEEeCC------------HHHHHHHHHHCCCCCEEEEecCcc--ccHHHHHHHcCCeEEecchhc
Confidence 44555666676 567887753 245677888889988877665432 123345566676665433211
Q ss_pred hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 243 v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+. -+.++.+++ .|+.+.+.- -.+.+ .++.+.++|+|.|.-
T Consensus 199 -------~~---------~~~v~~~~~---~G~~v~~wT----vn~~~----~~~~l~~~GvdgIiT 238 (252)
T 2pz0_A 199 -------II---------PELVEGCKK---NGVKLFPWT----VDRKE----DMERMIKAGVDGIIT 238 (252)
T ss_dssp -------CC---------HHHHHHHHH---TTCEECCBC----CCSHH----HHHHHHHHTCSEEEE
T ss_pred -------CC---------HHHHHHHHH---CCCEEEEEC----CCCHH----HHHHHHHcCCCEEEc
Confidence 11 256777777 566654332 13433 456667889998754
No 292
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=37.16 E-value=2.6e+02 Score=26.19 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=83.7
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHHHH
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVAK 230 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~~ 230 (375)
++++..+.|+.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |..+ +. +.++.|.+
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----~--~~~~~e~v~avr~a~g~~~~l~v---Dan~~~~~~~a~~~~~~l~~ 214 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYP----A--LDQDLAVVRSIRQAVGDDFGIMV---DYNQSLDVPAAIKRSQALQQ 214 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCS----S--HHHHHHHHHHHHHHHCSSSEEEE---ECTTCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC----C--HHHHHHHHHHHHHHhCCCCEEEE---ECCCCCCHHHHHHHHHHHHH
Confidence 578888889999999999998865431 1 345578899998876 5665542 2111 22 33455555
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|++.+ |-- +. ..+ ++.++.+++.. +++ |+ .+|+.....+..+.+++-.+|+|.+-
T Consensus 215 ~~i~~i----E~P------~~--~~~----~~~~~~l~~~~--~iP----I~--~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 215 EGVTWI----EEP------TL--QHD----YEGHQRIQSKL--NVP----VQ--MGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp HTCSCE----ECC------SC--TTC----HHHHHHHHHTC--SSC----EE--ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred hCCCeE----ECC------CC--hhh----HHHHHHHHHhC--CCC----EE--eCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 565543 210 11 223 44455555521 122 22 23443333334444556667877663
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
|. .+-. ..+..++..+|++.|...+.++
T Consensus 271 ----~~----~~GG---i~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 271 ----AM----KIGG---VTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp ----TT----TTTH---HHHHHHHHHHHHHTTCCBCCBS
T ss_pred ----ch----hhCC---HHHHHHHHHHHHHcCCeEeecc
Confidence 22 1111 4567778888888888776665
No 293
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=37.08 E-value=1.3e+02 Score=28.94 Aligned_cols=50 Identities=20% Similarity=0.090 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie 212 (375)
.++++..+.|+.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.|.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~----~--~~~~~e~v~avR~a~G~~~~l~ 194 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHR----D--FDRDLRRLELLKTCVPAGSKVM 194 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCS----S--HHHHHHHHHHHHTTSCTTCEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCC----C--HHHHHHHHHHHHHhhCCCCeEE
Confidence 4688899999999999999988765531 1 344578889998876 566554
No 294
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=37.00 E-value=2.3e+02 Score=25.46 Aligned_cols=154 Identities=7% Similarity=0.026 Sum_probs=86.0
Q ss_pred CCCCcCCCCCCCCCCCCCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecC-CC
Q 017200 140 TRGCRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP-DF 218 (375)
Q Consensus 140 ~~~C~FC~v~~~r~~~~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~p-d~ 218 (375)
..-|.-+.||.+. .+.+..+.+++. .+.|.++|-++---. .+.++..+.+.+-|+++++..++..+.+++- .+
T Consensus 51 v~v~tvigFP~G~----~~~~~k~~E~~~-i~~GAdEID~Vinig-~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~ 124 (226)
T 1vcv_A 51 VKLCVVADFPFGA----LPTASRIALVSR-LAEVADEIDVVAPIG-LVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPY 124 (226)
T ss_dssp SEEEEEESTTTCC----SCHHHHHHHHHH-HTTTCSEEEEECCHH-HHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG
T ss_pred CeEEEEeCCCCCC----CchHHHHHHHHH-HHCCCCEEEEecchh-hhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccC
Confidence 3446666777543 345667788888 999999997764211 1222335667788888888766555664332 22
Q ss_pred CCChHH----HHHHHHcCccccccc--ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHH
Q 017200 219 RGNNGC----VREVAKSGLNVFAHN--IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQV 292 (375)
Q Consensus 219 ~g~~e~----l~~L~~aGldv~~hn--lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~ 292 (375)
. +++. .+...++|.|.+--+ ....+.=-+.-.+.+++.++..-..+.+++..+. +.+|.. |=--|.+|.
T Consensus 125 L-t~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~-v~vKaa---GGirt~~~a 199 (226)
T 1vcv_A 125 L-RDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYR-LGVKMA---GGIRTREQA 199 (226)
T ss_dssp C-CHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCC-CEEEEE---SSCCSHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCC-ceEEEe---CCCCCHHHH
Confidence 2 3333 345567898876432 1100000011112467766653333333333222 555543 222578999
Q ss_pred HHHHHHHHHcCCc
Q 017200 293 VSTMEKVRAAGVD 305 (375)
Q Consensus 293 ~etl~~Lrelgvd 305 (375)
++.++.. ++|.+
T Consensus 200 l~~i~a~-~~Ga~ 211 (226)
T 1vcv_A 200 KAIVDAI-GWGED 211 (226)
T ss_dssp HHHHHHH-CSCSC
T ss_pred HHHHHHH-HCCCC
Confidence 9888888 58877
No 295
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=36.88 E-value=1.1e+02 Score=29.63 Aligned_cols=117 Identities=10% Similarity=0.003 Sum_probs=61.3
Q ss_pred CCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCC-ChHHHHHHH---HcCcccccccccchHHHHHHhcCCCCCHHHHH
Q 017200 187 LADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRG-NNGCVREVA---KSGLNVFAHNIETVEELQSAVRDHRANFKQSL 261 (375)
Q Consensus 187 l~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g-~~e~l~~L~---~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l 261 (375)
+...|.+.|++.++.+++ .++..|-+ +.+.-.. -.+.++.+. ++|.|.+..|+-.-.. +--+.-..+.+...
T Consensus 106 ~~n~G~~~~~~~l~~~~~-~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~--~gg~~l~~~~e~~~ 182 (354)
T 4ef8_A 106 LPNNGFDFYLAYAAEQHD-YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV--PGKPQVAYDFDAMR 182 (354)
T ss_dssp CCBCCHHHHHHHHHHTCC-TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS--TTSCCGGGSHHHHH
T ss_pred CCCcCHHHHHHHHHHHhh-cCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC--CCchhhccCHHHHH
Confidence 333456667666655432 22222222 1111000 023344444 4577777777653110 00010123567777
Q ss_pred HHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC-CcEEeee
Q 017200 262 DVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG-VDVMTFG 310 (375)
Q Consensus 262 ~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelg-vd~v~i~ 310 (375)
++++.+++....=+.+|... +-+++++.+.++.+.+.+ +|.|++.
T Consensus 183 ~il~av~~~~~~PV~vKi~p----~~d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 183 QCLTAVSEVYPHSFGVKMPP----YFDFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHHHHHHHHCCSCEEEEECC----CCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHHHHHHhhCCCeEEEecC----CCCHHHHHHHHHHHHhCCCccEEEEe
Confidence 88888887542113344432 347889999999999998 9988763
No 296
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=36.79 E-value=92 Score=28.82 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=52.8
Q ss_pred CCcchHHHHHHHHHhcC-CcEEEEEeeeC-----C---C---CC----cc---c---HHHHHHHHHHHHHhCCCcEEEee
Q 017200 157 PDPDEPTNVAEAIASWG-LDYVVITSVDR-----D---D---LA----DQ---G---SGHFAQTVRKLKELKPNMLIEAL 214 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G-~~eIvLTsgdr-----~---d---l~----d~---G---~~~~~~lir~Ik~~~p~i~Ie~l 214 (375)
++.+++.+.++.+.+.| ++.|++++... + . ++ .+ | .....+.++.+++..|++.|-..
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~ 250 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC 250 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE
Confidence 46678888899999999 99999876430 0 0 10 01 1 12235788888887666666433
Q ss_pred cCCCCCChHHHHHHHHcCccccccc
Q 017200 215 VPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 215 ~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
+... +.+.+.++..+|.|.+..+
T Consensus 251 -GGI~-~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 251 -GGVY-SGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp -SSCC-SHHHHHHHHHHTCSSEEEC
T ss_pred -CCCC-CHHHHHHHHHcCCCEEEEc
Confidence 3332 5677777778899987654
No 297
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=36.26 E-value=44 Score=31.50 Aligned_cols=134 Identities=14% Similarity=0.231 Sum_probs=78.4
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCC-ccc------HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQG------SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d~G------~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (375)
.+|+++.|..++ =..|+|+=-.+..+. ++| .+.+.++|+.+++. +++|.+++-. +.++++.-++.
T Consensus 104 t~emi~ial~~k---P~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~--GIrVSLFIDp---d~~qI~aA~~~ 175 (278)
T 3gk0_A 104 TPEMLDIACEIR---PHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADA--GVRVSLFIDP---DEAQIRAAHET 175 (278)
T ss_dssp SHHHHHHHHHHC---CSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHT--TCEEEEEECS---CHHHHHHHHHH
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHC--CCEEEEEeCC---CHHHHHHHHHh
Confidence 468888877654 367777644333331 223 56788888888874 7999987732 67899999999
Q ss_pred CcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEeee
Q 017200 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFG 310 (375)
Q Consensus 232 Gldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel-gvd~v~i~ 310 (375)
|.|++...-+..-..+..-. +...++...+..+.|++ .|+.+.+ |+|=+-+.+... ..+ ++.-++||
T Consensus 176 GAd~IELhTG~YA~a~~~~~-~~~el~rl~~aA~~A~~---lGL~VnA----GHGL~y~Nv~~i----a~ip~i~ElnIG 243 (278)
T 3gk0_A 176 GAPVIELHTGRYADAHDAAE-QQREFERIATGVDAGIA---LGLKVNA----GHGLHYTNVQAI----AALPGIAELNIG 243 (278)
T ss_dssp TCSEEEECCHHHHTCSSHHH-HHHHHHHHHHHHHHHHH---TTCEEEE----CTTCCTTTHHHH----HTCTTEEEEEEC
T ss_pred CcCEEEEecchhhccCCchh-HHHHHHHHHHHHHHHHH---cCCEEec----CCCCCHHHHHHH----HhCCCCeEEecC
Confidence 99987543111000000000 01123444555566666 4676554 677666655422 233 35677887
Q ss_pred cC
Q 017200 311 QY 312 (375)
Q Consensus 311 qY 312 (375)
.+
T Consensus 244 Ha 245 (278)
T 3gk0_A 244 HA 245 (278)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 298
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=36.01 E-value=1.2e+02 Score=28.50 Aligned_cols=90 Identities=16% Similarity=0.212 Sum_probs=53.8
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGT 275 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl 275 (375)
.+.++..++..|...|++..- +.+.+++..++|+|++-. + +.+.++..+.++.++..+|. +
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~----t~eea~eal~aGaD~I~L--D------------n~~~~~~~~~v~~l~~~~~~-v 242 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD----SLEQLDAVLPEKPELILL--D------------NFAVWQTQTAVQRRDSRAPT-V 242 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES----SHHHHHHHGGGCCSEEEE--E------------TCCHHHHHHHHHHHHHHCTT-C
T ss_pred HHHHHHHHHhCCCCCEEEEeC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHHhhccCCC-e
Confidence 457788888887444444332 457888888899997632 1 23456666666666664333 3
Q ss_pred eEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 276 LTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 276 ~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
.+-.+ =|+ |.+ ++..+.+.|+|++.+|..
T Consensus 243 ~ieaS--GGI--t~~----~i~~~a~tGVD~isvG~l 271 (284)
T 1qpo_A 243 MLESS--GGL--SLQ----TAATYAETGVDYLAVGAL 271 (284)
T ss_dssp EEEEE--SSC--CTT----THHHHHHTTCSEEECGGG
T ss_pred EEEEE--CCC--CHH----HHHHHHhcCCCEEEECHH
Confidence 22111 123 333 344557899999999864
No 299
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=35.94 E-value=1.8e+02 Score=27.46 Aligned_cols=114 Identities=12% Similarity=0.182 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHH-HHHHHHHHh
Q 017200 192 SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSL-DVLMMAKDY 270 (375)
Q Consensus 192 ~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l-~vl~~ak~~ 270 (375)
.....+.++.+++. ++.| .+-||-.....+..|.+..+|.+..- ..+...+.. .......+ .++..++..
T Consensus 211 ~~~~~~~l~~Lr~~--G~~i--alDDFGtG~ssl~~L~~lp~d~iKID----~sfv~~~~~-~~~~~~iv~~ii~la~~l 281 (340)
T 4hjf_A 211 PERAAVILKTLRDA--GAGL--ALDDFGTGFSSLSYLTRLPFDTLKID----RYFVRTMGN-NAGSAKIVRSVVKLGQDL 281 (340)
T ss_dssp HHHHHHHHHHHHHH--TCEE--EEECTTSSSCGGGTGGGSCCSEEEEC----HHHHHHTTT-CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHc--CCCc--cccCCCCCcchHHHHHhCCCChhccc----HHhhhcccC-CHhHHHHHHHHHHHHHHc
Confidence 34456667777664 3443 33345323344556666666665541 144444441 11122222 445666663
Q ss_pred CCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC-CCCCCCCCccccCCHHHHHHHHH
Q 017200 271 VPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVSEYITPEAFERYRA 336 (375)
Q Consensus 271 ~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl-~P~~~~~~v~~~v~pe~~~~l~~ 336 (375)
|+.+-+- --||.++ ++.|+++|++.+= |.|+ +| + ++++++.|-.
T Consensus 282 ---g~~vvAE----GVEt~~q----~~~L~~lG~d~~Q-Gy~~~~P----~------~~~~~~~~l~ 326 (340)
T 4hjf_A 282 ---DLEVVAE----GVENAEM----AHALQSLGCDYGQ-GFGYAPA----L------SPQEAEVYLN 326 (340)
T ss_dssp ---TCEEEEE----CCCSHHH----HHHHHHTTCCEEE-STTTCCS----B------CHHHHHHHHH
T ss_pred ---CCEEEEE----eCCcHHH----HHHHHHcCCCEee-cCccccC----C------CHHHHHHHHH
Confidence 5543222 2399876 5678999999763 3344 33 2 3667776643
No 300
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.48 E-value=1.6e+02 Score=22.99 Aligned_cols=39 Identities=10% Similarity=0.206 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 82 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 120 (150)
T 4e7p_A 82 LEVLEWIRSEKLETKVVVVTTFK--RAGYFERAVKAGVDAY 120 (150)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEeCCC--CHHHHHHHHHCCCcEE
Confidence 56788888878888877776654 5677778888887754
No 301
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=35.42 E-value=1.4e+02 Score=26.69 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=64.6
Q ss_pred HHHHHHHHhcCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeec-CCCCCC-hHHHHHHHHcCccccccc
Q 017200 163 TNVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV-PDFRGN-NGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 163 ~~~a~al~~~G~-~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~-pd~~g~-~e~l~~L~~aGldv~~hn 239 (375)
..+++.+.+.|. +.++++|-+ .+.++.+++..|++.+..+. .....+ .+.+..+...|++.+..+
T Consensus 129 ~~v~~~l~~~~~~~~v~i~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~ 196 (258)
T 2o55_A 129 QRLLLLVEKYHMQERVDYCSFH------------HEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSML 196 (258)
T ss_dssp HHHHHHHHTTTCGGGEEEEESS------------HHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCCCEEEEeCC------------HHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecC
Confidence 445666677776 577777643 24567788888998887766 322111 223344566777665433
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
... +. -+.++.+|+ .|+.+.+.-+-++..+.++ ++.+.++|+|.|.-
T Consensus 197 ~~~-------~~---------~~~v~~~~~---~G~~v~~wTv~~~~n~~~~----~~~l~~~GvdgI~T 243 (258)
T 2o55_A 197 FHY-------LT---------KEQVCTAHE---KGLSVTVWMPWIFDDSEED----WKKCLELQVDLICS 243 (258)
T ss_dssp GGG-------CC---------HHHHHHHHH---TTCEEEEECCTTCCCCHHH----HHHHHHHTCSEEEE
T ss_pred hhh-------cC---------HHHHHHHHH---CCCEEEEeeCCCCCCCHHH----HHHHHHcCCCEEEe
Confidence 211 11 256777777 5776655443222344443 45667789998753
No 302
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=35.37 E-value=2.5e+02 Score=25.34 Aligned_cols=121 Identities=8% Similarity=0.038 Sum_probs=69.4
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEE--EeecCCCCCChHHHHHHHHcCccccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI--EALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~I--e~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
..+.+..+.+.+.|+..+|+.+..... .+ .+++.+++ +.+|+..+ -.+.|+. ..+.|+.+.+.|+..+.
T Consensus 53 ~~~e~~l~~~~~~GV~~~V~v~~~~~~-~~--n~~~~~~~----~~~p~r~~g~~~v~P~~--~~~eL~~l~~~gv~Gi~ 123 (294)
T 4i6k_A 53 ATVQSFISHLDEHNFTHGVLVQPSFLG-TN--NQAMLNAI----QQYPDRLKGIAVVQHTT--TFNELVNLKAQGIVGVR 123 (294)
T ss_dssp BCHHHHHHHHHHTTCCEEEEECCGGGT-TC--CHHHHHHH----HHSTTTEEEEECCCTTC--CHHHHHHHHTTTEEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEecCcccc-cc--hHHHHHHH----HHCCCeEEEEEEeCCcc--cHHHHHHHHHCCCcEEE
Confidence 456666677789999999998764311 11 23344433 34565333 2355654 56788888887766555
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCc
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVD 305 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd 305 (375)
++.... .++...-+.+...++.+.+ .|+.+-.++ ...++.+.+..+++.++.
T Consensus 124 l~~~~~-------~~~~~~~~~~~~~~~~a~~---~glpv~iH~------~~~~l~~~~~~l~~~p~~ 175 (294)
T 4i6k_A 124 LNLFGL-------NLPALNTPDWQKFLRNVES---LNWQVELHA------PPKYLVQLLPQLNEYSFD 175 (294)
T ss_dssp EECTTS-------CCCCSSSHHHHHHHHHHHH---TTCEEEEEC------CHHHHHHHHHHHTTSSSC
T ss_pred eccCCC-------CCCCcccHHHHHHHHHHHH---cCCEEEEee------CcchHHHHHHHHHHCCCC
Confidence 432110 0012233677888888888 467655443 234455566666666644
No 303
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=35.06 E-value=90 Score=29.60 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+.+ ++++++.+.|++.|.|=. -+ .+.+.+.++.+ .+++.|+++- .. +.+.+..+.+.|+|.+..
T Consensus 216 vdtl-de~~eAl~aGaD~I~LDn---~~-----~~~l~~av~~i---~~~v~ieaSG-GI--~~~~i~~~a~tGVD~isv 280 (298)
T 3gnn_A 216 VETL-DQLRTALAHGARSVLLDN---FT-----LDMMRDAVRVT---EGRAVLEVSG-GV--NFDTVRAIAETGVDRISI 280 (298)
T ss_dssp ESSH-HHHHHHHHTTCEEEEEES---CC-----HHHHHHHHHHH---TTSEEEEEES-SC--STTTHHHHHHTTCSEEEC
T ss_pred eCCH-HHHHHHHHcCCCEEEECC---CC-----HHHHHHHHHHh---CCCCeEEEEc-CC--CHHHHHHHHHcCCCEEEE
Confidence 3444 345566678998887632 11 34455555544 5678888653 33 678899999999998865
Q ss_pred c
Q 017200 239 N 239 (375)
Q Consensus 239 n 239 (375)
+
T Consensus 281 G 281 (298)
T 3gnn_A 281 G 281 (298)
T ss_dssp G
T ss_pred C
Confidence 4
No 304
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=34.96 E-value=1.5e+02 Score=28.63 Aligned_cols=120 Identities=13% Similarity=0.188 Sum_probs=63.4
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCC----CCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRD----DLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~----dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
|.+..++.|+++++.|.+.+.+..=..+ .+...|.+.+ ..++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl-~~l~~~~~e~-Gl~~--~te~~--d~~~~~~l~~~-v 190 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGL-EYLREAADKY-GMYV--VTEAL--GEDDLPKVAEY-A 190 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECS--SGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHH-HHHHHHHHHc-CCcE--EEEeC--CHHHHHHHHHh-C
Confidence 4788999999999999997655433211 1111233333 3444444433 2332 33223 56777777777 8
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCC
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGV 304 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgv 304 (375)
|++..+--+.. ...+|+.+.+.... +.+++++ .=|.+|+...++.+++.|.
T Consensus 191 d~lkIgAr~~~---------------n~~LL~~va~~~kP-Vilk~G~----~~tl~ei~~Ave~i~~~GN 241 (350)
T 1vr6_A 191 DIIQIGARNAQ---------------NFRLLSKAGSYNKP-VLLKRGF----MNTIEEFLLSAEYIANSGN 241 (350)
T ss_dssp SEEEECGGGTT---------------CHHHHHHHHTTCSC-EEEECCT----TCCHHHHHHHHHHHHHTTC
T ss_pred CEEEECccccc---------------CHHHHHHHHccCCc-EEEcCCC----CCCHHHHHHHHHHHHHCCC
Confidence 88877532111 01223333222111 3344443 2267777777777777665
No 305
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=34.95 E-value=1.3e+02 Score=28.79 Aligned_cols=52 Identities=12% Similarity=0.139 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhCCCC-ceEEEeE---EEec---CCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 260 SLDVLMMAKDYVPAG-TLTKTSI---MLGC---GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 260 ~l~vl~~ak~~~p~G-l~tkt~i---mvGl---GET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
.+++++.+++..+.. +.++-+. .-|. +.+.++.++.++.|.+.|+|++++..
T Consensus 214 ~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 214 VLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp HHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 467788888876431 1222221 1121 44778899999999999999999963
No 306
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.80 E-value=37 Score=29.78 Aligned_cols=91 Identities=9% Similarity=0.057 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcC----CCCCHHHHHHHHHHHH
Q 017200 193 GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRD----HRANFKQSLDVLMMAK 268 (375)
Q Consensus 193 ~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~----r~~s~~~~l~vl~~ak 268 (375)
..+.++++.+.... +..+.+...++..-.+..+.+ +.|.|++=-.=-|..-+.+.+.- =..+..+.|+.|..|+
T Consensus 14 ~~l~~~~~~i~~e~-~~~i~i~~~~l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~~~iPVV~I~~s~~Dil~al~~a~ 91 (196)
T 2q5c_A 14 ENLLNLFPKLALEK-NFIPITKTASLTRASKIAFGL-QDEVDAIISRGATSDYIKKSVSIPSISIKVTRFDTMRAVYNAK 91 (196)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEEECCHHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHhhh-CCceEEEECCHHHHHHHHHHh-cCCCeEEEECChHHHHHHHhCCCCEEEEcCCHhHHHHHHHHHH
Confidence 34666676666543 335555665552112334444 56776551110122222222110 2578889999999999
Q ss_pred HhCCCCceEEEeEEEecCCCHHH
Q 017200 269 DYVPAGTLTKTSIMLGCGETPDQ 291 (375)
Q Consensus 269 ~~~p~Gl~tkt~imvGlGET~ee 291 (375)
+... ---++|++....+
T Consensus 92 ~~~~------kIavvg~~~~~~~ 108 (196)
T 2q5c_A 92 RFGN------ELALIAYKHSIVD 108 (196)
T ss_dssp GGCS------EEEEEEESSCSSC
T ss_pred hhCC------cEEEEeCcchhhH
Confidence 8521 2345677555444
No 307
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=34.74 E-value=92 Score=30.12 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCC-ceEEEeE---EEec--CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 261 LDVLMMAKDYVPAG-TLTKTSI---MLGC--GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 261 l~vl~~ak~~~p~G-l~tkt~i---mvGl--GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+++++.+++..+.. +.++-+. .-|+ +++.++..+.++.|.+.|+|++++.
T Consensus 207 ~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~ 262 (362)
T 4ab4_A 207 LEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSR 262 (362)
T ss_dssp HHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEEC
Confidence 56777777765431 1222221 1122 2346789999999999999999985
No 308
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=34.52 E-value=43 Score=32.38 Aligned_cols=52 Identities=8% Similarity=0.009 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCCC-ceEEEeE---EEe--cCCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 260 SLDVLMMAKDYVPAG-TLTKTSI---MLG--CGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 260 ~l~vl~~ak~~~p~G-l~tkt~i---mvG--lGET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
.+++++.+++..+.. +.++-+. .-| -|.+.++..+.++.|.+.|+|.|++..
T Consensus 214 ~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 214 LDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 356777777765321 1222221 101 256788999999999999999999974
No 309
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=34.33 E-value=1.5e+02 Score=22.51 Aligned_cols=58 Identities=3% Similarity=0.159 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~ 269 (375)
.++++.|++..|.+.|-+++..- +.+......++|++.|= . +..+.++.++.++.+.+
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~l-------------~-Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 65 LEVLAEIRKKHLNIKVIIVTTFK--RPGYFEKAVVNDVDAYV-------------L-KERSIEELVETINKVNN 122 (133)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEEE-------------E-TTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcEEEEecCC--CHHHHHHHHHcCCcEEE-------------E-CCCCHHHHHHHHHHHHc
Confidence 36677777767777776666543 45666667777776541 1 23455555555555543
No 310
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=34.31 E-value=2.1e+02 Score=26.78 Aligned_cols=169 Identities=15% Similarity=0.134 Sum_probs=92.9
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHh-CCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
+.+.+..+++++.+.+.--|+-++...-.+- .|...+..+++.+.+. ...+.|- +.-|...+.+.+..-.++|-.+
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~-~g~~~~~~~v~~~A~~~~~~VPVa-lHlDHg~~~e~i~~ai~~GFtS- 106 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHM-TGFKTVVAMVKALIEEMNITVPVA-IHLDHGSSFEKCKEAIDAGFTS- 106 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHT-SCHHHHHHHHHHHHHHTTCCSCEE-EEEEEECSHHHHHHHHHHTCSE-
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhc-CCHHHHHHHHHHHHHhcCCCCcEE-EECCCCCCHHHHHHHHHcCCCe-
Confidence 4577777888888888776665553221120 2456677888777651 2334443 4445544678888888888554
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCH---------HHHHHHHHHHHHcCCc
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETP---------DQVVSTMEKVRAAGVD 305 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~---------ee~~etl~~Lrelgvd 305 (375)
+.++.+..=| ..+.+..-++++.||. .|+.+-.- +|. |+.+ -+-.+..+++++.|+|
T Consensus 107 -VMiDgS~~p~------eeNi~~Tk~vv~~ah~---~gvsVEaE--lG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD 174 (288)
T 3q94_A 107 -VMIDASHHPF------EENVETTKKVVEYAHA---RNVSVEAE--LGTVGGQEDDVIAEGVIYADPAECKHLVEATGID 174 (288)
T ss_dssp -EEECCTTSCH------HHHHHHHHHHHHHHHT---TTCEEEEE--ESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCS
T ss_pred -EEEeCCCCCH------HHHHHHHHHHHHHHHH---cCCeEEEE--eeeeccccCCcCCccccCCCHHHHHHHHHHHCCC
Confidence 3455443111 1123445577888887 46655433 344 2211 2235677888899999
Q ss_pred EEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 306 VMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 306 ~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
.+-+. + ++-|-.-... ..=.|++|+++....++-.|
T Consensus 175 ~LAva-i---Gt~HG~Y~~~-p~Ld~~~L~~I~~~v~vpLV 210 (288)
T 3q94_A 175 CLAPA-L---GSVHGPYKGE-PNLGFAEMEQVRDFTGVPLV 210 (288)
T ss_dssp EEEEC-S---SCBSSCCSSS-CCCCHHHHHHHHHHHCSCEE
T ss_pred EEEEE-c---CcccCCcCCC-CccCHHHHHHHHHhcCCCEE
Confidence 86552 1 1111100000 01136777777776666444
No 311
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=34.30 E-value=96 Score=28.72 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=39.0
Q ss_pred HHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 167 EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 167 ~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
+.+.+.|+++|-+|+.+...+. .+.+ .++.|.+..| ++.+-+..+-. +.+.+..+.++|+|.+-.+
T Consensus 176 ~~A~~~Gad~IGv~~r~l~~~~-~dl~----~~~~l~~~v~~~~pvVaegGI~--t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 176 DRALKAGAKVIGVNARDLMTLD-VDRD----CFARIAPGLPSSVIRIAESGVR--GTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHHHHHTCSEEEEESBCTTTCC-BCTT----HHHHHGGGSCTTSEEEEESCCC--SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHCCCCEEEECCCcccccc-cCHH----HHHHHHHhCcccCEEEEECCCC--CHHHHHHHHHcCCCEEEEc
Confidence 3344679999988865533332 1233 3445555444 44443332222 5889999999999877654
No 312
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=34.30 E-value=3.2e+02 Score=26.23 Aligned_cols=131 Identities=17% Similarity=0.222 Sum_probs=74.0
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnl 240 (375)
+..+.++.+.+.|++.|.|-.... + ...+.++|+.|++..|++.|-+ +... +.+.++.+.++|+|.+..+.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g----~--~~~~~e~i~~ir~~~~~~pviv--~~v~-~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHG----H--STRIIELIKKIKTKYPNLDLIA--GNIV-TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC----S--SHHHHHHHHHHHHHCTTCEEEE--EEEC-SHHHHHHHHTTTCSEEEECS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCC----C--hHHHHHHHHHHHHHCCCCeEEE--cCCC-cHHHHHHHHhcCCCEEEECC
Confidence 456667788889999998822221 1 2457889999999876655432 2111 57888999999999875533
Q ss_pred cc--hHHHHHHhcCCCCCHHHHHHHHHHHHHhCCC-CceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 241 ET--VEELQSAVRDHRANFKQSLDVLMMAKDYVPA-GTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 241 Et--v~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~-Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+. .... ......+..- ++.+..+++..+. +++ +|. |=--|.+|+.+.+. +|.+.|-++.-
T Consensus 224 ~~G~~~~~-~~~~~~g~p~---~~~l~~v~~~~~~~~ip----Via~GGI~~~~d~~~ala----~GAd~V~iG~~ 287 (404)
T 1eep_A 224 GPGSICTT-RIVAGVGVPQ---ITAICDVYEACNNTNIC----IIADGGIRFSGDVVKAIA----AGADSVMIGNL 287 (404)
T ss_dssp SCSTTSHH-HHHHCCCCCH---HHHHHHHHHHHTTSSCE----EEEESCCCSHHHHHHHHH----HTCSEEEECHH
T ss_pred CCCcCcCc-cccCCCCcch---HHHHHHHHHHHhhcCce----EEEECCCCCHHHHHHHHH----cCCCHHhhCHH
Confidence 21 1111 1111111111 3344444443221 232 232 22247888887774 58988888644
No 313
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=34.17 E-value=2.2e+02 Score=26.70 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=93.0
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.+.+...++++.+.+.--|+-++...-.+ .|...+..+++.+.+..+ +.|- +.-|.-.+.+.+..-.++|-.+
T Consensus 27 n~e~~~avl~AAe~~~sPvIlq~s~~~~~y--~g~~~~~~~v~~~a~~~~-VPVa-lHlDHg~~~e~i~~ai~~GFtS-- 100 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVILAGTPGTFKH--IALEEIYALCSAYSTTYN-MPLA-LHLDHHESLDDIRRKVHAGVRS-- 100 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEEEECTTHHHH--SCHHHHHHHHHHHHHHTT-SCBE-EEEEEECCHHHHHHHHHTTCCE--
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhh--cCHHHHHHHHHHHHHhCC-CcEE-EEcCCCCCHHHHHHHHHcCCCe--
Confidence 456777778888888876565444321112 246778888888877652 3332 3445444678888888998543
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-CCH----------HHHHHHHHHHHHcCC
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-ETP----------DQVVSTMEKVRAAGV 304 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--G-ET~----------ee~~etl~~Lrelgv 304 (375)
+.++.+..=|. .+.+...++++.+|. .|+.+-.- +|. | |.. -+-.+..+++++.|+
T Consensus 101 VMiDgS~lp~e------eNi~~Tk~vv~~ah~---~gvsVEaE--lG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tgv 169 (286)
T 1gvf_A 101 AMIDGSHFPFA------ENVKLVKSVVDFCHS---QDCSVEAE--LGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGV 169 (286)
T ss_dssp EEECCTTSCHH------HHHHHHHHHHHHHHH---TTCEEEEE--ESCCC-----------CCSSCCHHHHHHHHHHHCC
T ss_pred EEECCCCCCHH------HHHHHHHHHHHHHHH---cCCEEEEE--EeeccCcccCcccccccccCCCHHHHHHHHHHHCC
Confidence 45555431111 133455678888888 35544332 344 2 211 123467788889999
Q ss_pred cEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 305 DVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 305 d~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
|.+-+. + ++-|-.-... ..=.|++|+++....++-.|
T Consensus 170 D~LAva-i---Gt~HG~Y~~~-p~Ld~~~L~~I~~~~~vpLV 206 (286)
T 1gvf_A 170 DSLAVA-I---GTAHGLYSKT-PKIDFQRLAEIREVVDVPLV 206 (286)
T ss_dssp SEEEEC-S---SCCSSCCSSC-CCCCHHHHHHHHHHCCSCEE
T ss_pred CEEEee-c---CccccCcCCC-CccCHHHHHHHHHhcCCCEE
Confidence 986653 1 1222111111 11136777777776665444
No 314
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=34.12 E-value=63 Score=29.47 Aligned_cols=71 Identities=10% Similarity=0.159 Sum_probs=42.3
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCCC--CCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHH-HcCcccc
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA-KSGLNVF 236 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~d--l~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~-~aGldv~ 236 (375)
.++.+..+.+.++|++.|. |||-... .. .|.+.+.++++. ..+. |+++.+.=. +.+.+..+. ..|++.+
T Consensus 133 ~d~~~ale~L~~lGv~rIL-TSG~~~~~~a~-~g~~~L~~Lv~~---a~~r--i~Im~GgGV-~~~Ni~~l~~~tGv~e~ 204 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRIL-LHGSSNGEPII-ENIKHIKALVEY---ANNR--IEIMVGGGV-TAENYQYICQETGVKQA 204 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEE-ECSCSSCCCGG-GGHHHHHHHHHH---HTTS--SEEEECSSC-CTTTHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHHcCCCEEE-CCCCCCCCcHH-HHHHHHHHHHHh---hCCC--eEEEeCCCC-CHHHHHHHHHhhCCCEE
Confidence 4566778889999999986 8876544 33 355655555543 2233 344443211 445566665 6788776
Q ss_pred cc
Q 017200 237 AH 238 (375)
Q Consensus 237 ~h 238 (375)
..
T Consensus 205 H~ 206 (224)
T 2bdq_A 205 HG 206 (224)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 315
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=33.99 E-value=1.9e+02 Score=23.49 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=42.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCC--CCC--C-hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPD--FRG--N-NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd--~~g--~-~e~l~~L~~ 230 (375)
.++++++ +++.+.+.+-|.|++-.... ...+.++++.|++..+ ++.| +.+. +.. + .+.-+.+++
T Consensus 41 ~p~e~~v---~~a~~~~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~g~~~i~v--~vGG~~~~~~~~~~~~~~~~~~ 110 (137)
T 1ccw_A 41 SPQELFI---KAAIETKADAILVSSLYGQG-----EIDCKGLRQKCDEAGLEGILL--YVGGNIVVGKQHWPDVEKRFKD 110 (137)
T ss_dssp ECHHHHH---HHHHHHTCSEEEEEECSSTH-----HHHHTTHHHHHHHTTCTTCEE--EEEESCSSSSCCHHHHHHHHHH
T ss_pred CCHHHHH---HHHHhcCCCEEEEEecCcCc-----HHHHHHHHHHHHhcCCCCCEE--EEECCCcCchHhhhhhHHHHHH
Confidence 3455554 45556788888888765332 3456778888887643 4443 2221 111 1 223456889
Q ss_pred cCcccccc
Q 017200 231 SGLNVFAH 238 (375)
Q Consensus 231 aGldv~~h 238 (375)
+|+|.+-+
T Consensus 111 ~G~d~~~~ 118 (137)
T 1ccw_A 111 MGYDRVYA 118 (137)
T ss_dssp TTCSEECC
T ss_pred CCCCEEEC
Confidence 99987765
No 316
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=33.61 E-value=1.7e+02 Score=26.98 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=78.7
Q ss_pred chHHHHHHHHHhcCCcEEEEEee-eCCCCC---c--ccHHHHHHHHHHHHHhCCCcEEEee-cCC------CCCCh-HHH
Q 017200 160 DEPTNVAEAIASWGLDYVVITSV-DRDDLA---D--QGSGHFAQTVRKLKELKPNMLIEAL-VPD------FRGNN-GCV 225 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg-dr~dl~---d--~G~~~~~~lir~Ik~~~p~i~Ie~l-~pd------~~g~~-e~l 225 (375)
+.+.+.++.+.++|.+.|++-+| +..+++ + ...+.+++.++.|.+...++.|.+- .|. +..+. +.+
T Consensus 107 ~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~~~~~~~~~~~~~~ 186 (333)
T 3ktc_A 107 ELMHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREPRVKMTWDSAARTL 186 (333)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSSSSEESSCSHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCCccccCCCHHHHH
Confidence 45666777788999999998776 222211 1 1345677777777666555544332 121 22344 444
Q ss_pred HHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEE-------EeEEEecCCCHHHHHHHHHH
Q 017200 226 REVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK-------TSIMLGCGETPDQVVSTMEK 298 (375)
Q Consensus 226 ~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tk-------t~imvGlGET~ee~~etl~~ 298 (375)
..+.+.+.+.+...+++..-. + -+.+..++++.+....++ . .+.++ .+.++|.|+ ..++.+.++.
T Consensus 187 ~ll~~v~~~~vgl~lD~~H~~---~--~g~~~~~~~~~~~~~~~i-~-~vH~~D~~~~~d~~~~~G~G~-~~d~~~i~~~ 258 (333)
T 3ktc_A 187 LGIEDIGLDNVGVLLDFGHAL---Y--GGESPADSAQLIIDRGRL-F-GMDVNDNLRGWDDDLVVGTVH-MTEIFEFFYV 258 (333)
T ss_dssp HHHHHHTCTTEEEEEEHHHHH---H--TTCCHHHHHHHHHHTTCE-E-EEEBCBCCSSSCCCBCTTSSC-HHHHHHHHHH
T ss_pred HHHHHcCCcceEEEEecCcHh---h--hcCCHHHHHHHHHhCCCE-E-EEEeCCCCCCCCCCcCCCCCC-HHHHHHHHHH
Confidence 555556655566666665422 1 245666666654322221 0 12222 223444443 2578888999
Q ss_pred HHHcCCc-EEee
Q 017200 299 VRAAGVD-VMTF 309 (375)
Q Consensus 299 Lrelgvd-~v~i 309 (375)
|++.|.+ .+.+
T Consensus 259 L~~~gy~G~i~l 270 (333)
T 3ktc_A 259 LKINNWQGVWQL 270 (333)
T ss_dssp HHHTTCCCCEEE
T ss_pred HHHcCCCceEEE
Confidence 9999987 4555
No 317
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=33.50 E-value=1.3e+02 Score=26.92 Aligned_cols=117 Identities=13% Similarity=0.140 Sum_probs=66.9
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc---ccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA---HNI 240 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~---hnl 240 (375)
+.++++.+.|++.|+|-+..+.+-. .+.++++.+++. ++.+-+-. . +.+.++...++|+|.+. ++.
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~-----~l~~~i~~~~~~--g~~v~~~v--~--t~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPV-----DIDSLLTRIRLH--GLLAMADC--S--TVNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS-----CHHHHHHHHHHT--TCEEEEEC--S--SHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEECccccCChH-----HHHHHHHHHHHC--CCEEEEec--C--CHHHHHHHHhCCCCEEEecCccC
Confidence 4456678899998877665432111 256677777764 33332211 1 67788889999999984 333
Q ss_pred cchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 241 Etv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
.+.. +....+ ++.++.+++. +++ +|..-| -|.+++.+.+ ++|++.+-+|.-
T Consensus 161 t~~~------~~~~~~----~~li~~l~~~---~ip----vIA~GGI~t~~d~~~~~----~~GadgV~VGsa 212 (229)
T 3q58_A 161 TGPI------TPVEPD----LAMVTQLSHA---GCR----VIAEGRYNTPALAANAI----EHGAWAVTVGSA 212 (229)
T ss_dssp SSSC------CCSSCC----HHHHHHHHTT---TCC----EEEESSCCSHHHHHHHH----HTTCSEEEECHH
T ss_pred CCCC------cCCCCC----HHHHHHHHHc---CCC----EEEECCCCCHHHHHHHH----HcCCCEEEEchH
Confidence 2211 111233 3555665552 232 222223 3777776554 679999888743
No 318
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=33.25 E-value=1.4e+02 Score=27.17 Aligned_cols=115 Identities=17% Similarity=0.274 Sum_probs=55.5
Q ss_pred HHHHHhcCCcEEEEEeee-CCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCcccccccccch
Q 017200 166 AEAIASWGLDYVVITSVD-RDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV 243 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgd-r~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv 243 (375)
++.+.++|. |.|+. +|.+-..+...|.+.+++|.+..+ .+.+++..-|..+..+..++|.+..
T Consensus 25 i~~~~~~g~----i~GvTTNPsi~~k~g~~~~~~i~ei~~iv~G~VS~EV~a~d~e~mi~eA~~L~~~~----------- 89 (230)
T 1vpx_A 25 IKKGVEWGI----VDGVTTNPTLISKEGAEFKQRVKEICDLVKGPVSAEVVSLDYEGMVREARELAQIS----------- 89 (230)
T ss_dssp HHHHHHTTC----CCEEECCC-----------CHHHHHHHHHCSCEEEECSCCSHHHHHHHHHHHHTTC-----------
T ss_pred HHHHHhcCC----cCCCccCHHHHHhcCCCHHHHHHHHHhccCCcEEEEEccCCHHHHHHHHHHHHHhC-----------
Confidence 345556665 34443 454422111346677777777643 3566655222211122223333332
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 244 EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 244 ~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
++++ |+ -..++ +-++.++.+.+ .|+.++.++++.+ ++-+-. -+.|.+++.++
T Consensus 90 ~nv~--IK-IP~T~-eGl~Ai~~L~~---eGI~vNvTliFS~----~QA~la----a~AGa~~iSpF 141 (230)
T 1vpx_A 90 EYVV--IK-IPMTP-DGIKAVKTLSA---EGIKTNVTLVFSP----AQAILA----AKAGATYVSPF 141 (230)
T ss_dssp TTEE--EE-EESSH-HHHHHHHHHHH---TTCCEEEEEECSH----HHHHHH----HHHTCSEEEEB
T ss_pred CCEE--EE-eCCCH-HHHHHHHHHHH---CCCCEEEEEeCCH----HHHHHH----HhCCCeEEEec
Confidence 2222 22 23454 44777777777 6899999999854 333222 25688877653
No 319
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=33.19 E-value=2.7e+02 Score=25.04 Aligned_cols=178 Identities=12% Similarity=0.071 Sum_probs=102.7
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.+++.+.++++.+.|+.-|++... ++... ++...++.|...++.-.|. ....+. .+
T Consensus 14 ~t~~~i~~l~~~A~~~~~~aVcv~p~------------~v~~a---~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~ 77 (226)
T 1vcv_A 14 LTVDEAVAGARKAEELGVAAYCVNPI------------YAPVV---RPLLRKVKLCVVADFPFGALPTASRIALVSR-LA 77 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHH---GGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHH------------HHHHH---HHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HH
Confidence 57889999999999999999986522 22222 2222237777666432332 223455 66
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i 309 (375)
.|.|-+..-+ + +..+. ..+|+..++-+..+++..+. ..+| +|+-. -=|++++....+...++|.|+|.-
T Consensus 78 ~GAdEID~Vi---n--ig~~~--~g~~~~v~~ei~~v~~a~~~-~~lK--vIlEt~~Lt~eei~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 78 EVADEIDVVA---P--IGLVK--SRRWAEVRRDLISVVGAAGG-RVVK--VITEEPYLRDEERYTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp TTCSEEEEEC---C--HHHHH--TTCHHHHHHHHHHHHHHTTT-SEEE--EECCGGGCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCCEEEEec---c--hhhhc--CCCHHHHHHHHHHHHHHHcC-CCce--EEEeccCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 7776543311 1 11222 34688888888888887643 2223 22222 127999999999999999999977
Q ss_pred ecCCCCC----CCCCCccccCCHHHHHHHHHHHHHhh--hhhhccchhhhhhcchhHHHHH
Q 017200 310 GQYMRPS----KRHMPVSEYITPEAFERYRALGMEMG--FRYVASGPMVRSSYKVVGWCYY 364 (375)
Q Consensus 310 ~qYl~P~----~~~~~v~~~v~pe~~~~l~~~a~~~g--f~~~~sgp~vrssy~a~~~~~~ 364 (375)
..=+.|. ..+.+ .-.+++..+.+++.-.+.| ....+|| -+|+ +..-..+++
T Consensus 148 STGf~~~~~~~~~~~~--~gAt~~dv~lm~~~i~~~g~~v~vKaaG-Girt-~~~al~~i~ 204 (226)
T 1vcv_A 148 STGFAEEAYAARQGNP--VHSTPERAAAIARYIKEKGYRLGVKMAG-GIRT-REQAKAIVD 204 (226)
T ss_dssp CCSCCCHHHHHHTTCC--SSCCHHHHHHHHHHHHHHTCCCEEEEES-SCCS-HHHHHHHHH
T ss_pred CCCCCccccccccCCC--CCCCHHHHHHHHHHHHHhCCCceEEEeC-CCCC-HHHHHHHHH
Confidence 4212210 00001 1235666677776655556 4556788 7787 333333443
No 320
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=33.10 E-value=80 Score=30.97 Aligned_cols=88 Identities=8% Similarity=0.126 Sum_probs=50.5
Q ss_pred HHHHHHHHcCccccccccc-c--hHHHH-HHhcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeEE---Eec-
Q 017200 223 GCVREVAKSGLNVFAHNIE-T--VEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSIM---LGC- 285 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlE-t--v~rl~-~~mr~r----~~s~~~----~l~vl~~ak~~~p~G-l~tkt~im---vGl- 285 (375)
+..+..+++|.|.+..|.- . .+..+ +..+.| +.+.+. .+++++.+++..+.. +.++-+.- -|+
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 3455667788887765431 1 12221 111112 233443 367788888765421 22332221 122
Q ss_pred -CCCHHHHHHHHHHHHHcC------CcEEeee
Q 017200 286 -GETPDQVVSTMEKVRAAG------VDVMTFG 310 (375)
Q Consensus 286 -GET~ee~~etl~~Lrelg------vd~v~i~ 310 (375)
|++.++.++.++.|.+.| +|++++.
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 456789999999999999 9999996
No 321
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=33.08 E-value=1.4e+02 Score=26.79 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=66.9
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc---cc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH---NI 240 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h---nl 240 (375)
+.++++.+.|++.|+|-+..+.+-. .+.++++.+++. ++.+-+-. . +.+.++.+.++|+|.+.. +.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~-----~l~~~i~~~~~~--g~~v~~~v--~--t~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPV-----AVEALLARIHHH--HLLTMADC--S--SVDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS-----CHHHHHHHHHHT--TCEEEEEC--C--SHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEECccccCCHH-----HHHHHHHHHHHC--CCEEEEeC--C--CHHHHHHHHhCCCCEEEEcCccC
Confidence 3456678899998887665432111 256677777764 33332211 1 677888999999999843 33
Q ss_pred cchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 241 Etv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
++..+ ....+ ++.++.+++. +++ +|..-| -|.+++.+. .++|++.+-+|.-
T Consensus 161 t~~~~------~~~~~----~~~i~~l~~~---~ip----vIA~GGI~t~~d~~~~----~~~GadgV~VGsa 212 (232)
T 3igs_A 161 TTPDT------PEEPD----LPLVKALHDA---GCR----VIAEGRYNSPALAAEA----IRYGAWAVTVGSA 212 (232)
T ss_dssp SSSSC------CSSCC----HHHHHHHHHT---TCC----EEEESCCCSHHHHHHH----HHTTCSEEEECHH
T ss_pred CCCCC------CCCCC----HHHHHHHHhc---CCc----EEEECCCCCHHHHHHH----HHcCCCEEEEehH
Confidence 22111 11233 3555556552 232 222223 367777655 4679999888744
No 322
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=32.76 E-value=3.2e+02 Score=25.73 Aligned_cols=132 Identities=20% Similarity=0.302 Sum_probs=77.6
Q ss_pred HHHHHhcCCcEEEEEeee------CCC----CCcccHH-HHHHHHHHHHHhCCCcEEEe-ecC-C-CCCChHHHHHHHHc
Q 017200 166 AEAIASWGLDYVVITSVD------RDD----LADQGSG-HFAQTVRKLKELKPNMLIEA-LVP-D-FRGNNGCVREVAKS 231 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgd------r~d----l~d~G~~-~~~~lir~Ik~~~p~i~Ie~-l~p-d-~~g~~e~l~~L~~a 231 (375)
|+...+.|++.|++-..- +.. +|-+.+. -..++-++|.-...++.|-+ +.+ | +......++.|+++
T Consensus 41 Ak~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~ 120 (286)
T 2p10_A 41 AKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEI 120 (286)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHH
T ss_pred hHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHh
Confidence 445556677877765431 221 2222232 23455554443333333322 211 2 33346678999999
Q ss_pred Ccccccccccch---H-HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE
Q 017200 232 GLNVFAHNIETV---E-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM 307 (375)
Q Consensus 232 Gldv~~hnlEtv---~-rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v 307 (375)
|...+ .|.-|+ + ..+..+-..+.+|++-.+.++.|++ .|+.|..-. -+.+|-.. +-++++|+|
T Consensus 121 Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~---~gL~Ti~~v-----~~~eeA~a----mA~agpDiI 187 (286)
T 2p10_A 121 GFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK---LDLLTTPYV-----FSPEDAVA----MAKAGADIL 187 (286)
T ss_dssp TCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHH---TTCEECCEE-----CSHHHHHH----HHHHTCSEE
T ss_pred CCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHH---CCCeEEEec-----CCHHHHHH----HHHcCCCEE
Confidence 98876 554443 3 3334443368899999999999999 477665544 57777654 357899988
Q ss_pred eee
Q 017200 308 TFG 310 (375)
Q Consensus 308 ~i~ 310 (375)
-+-
T Consensus 188 ~~h 190 (286)
T 2p10_A 188 VCH 190 (286)
T ss_dssp EEE
T ss_pred EEC
Confidence 764
No 323
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=32.67 E-value=75 Score=30.22 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017200 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (375)
Q Consensus 195 ~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~G 274 (375)
+.+.|+.+++..|...|++..- +.+.+++..++|+|++-. + +-+.++.-++++.++. .
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~----tl~e~~eAl~aGaDiImL--D------------n~s~~~l~~av~~~~~---~- 251 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECD----NISQVEESLSNNVDMILL--D------------NMSISEIKKAVDIVNG---K- 251 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEES----SHHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHTT---S-
T ss_pred HHHHHHHHHHhCCCCCEEEEEC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHhhcC---c-
Confidence 4567788888778777776553 457888888999998742 2 2233333344443332 1
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 275 l~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+.+-++. |=|. +.+..+.+.|+|+|.+|-.
T Consensus 252 v~leaSG----GIt~----~~i~~~A~tGVD~IsvGal 281 (300)
T 3l0g_A 252 SVLEVSG----CVNI----RNVRNIALTGVDYISIGCI 281 (300)
T ss_dssp SEEEEES----SCCT----TTHHHHHTTTCSEEECGGG
T ss_pred eEEEEEC----CCCH----HHHHHHHHcCCCEEEeCcc
Confidence 3222211 2243 3445567899999999854
No 324
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=32.47 E-value=80 Score=34.68 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=66.1
Q ss_pred ccHHHHHHHHHHHHHhCCCcEEEeec--CC-CCCChHHHHHHHHcCcccccccccchHHHHHHhcCCC------CCHHHH
Q 017200 190 QGSGHFAQTVRKLKELKPNMLIEALV--PD-FRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHR------ANFKQS 260 (375)
Q Consensus 190 ~G~~~~~~lir~Ik~~~p~i~Ie~l~--pd-~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~------~s~~~~ 260 (375)
.|.+++.+-++.+++..|+..+-+.. +. ...-.+.++.+.++|.|.+..|+-.-.. ++.++ .+.+..
T Consensus 616 ~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~----~~~~~~G~~~~~~~~~~ 691 (1025)
T 1gte_A 616 KTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG----MGERGMGLACGQDPELV 691 (1025)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC----CC-----SBGGGCHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC----CCCCCcccccccCHHHH
Confidence 35677777778888777664443322 21 0001455667778899998887643211 11111 356778
Q ss_pred HHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 261 LDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 261 l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.++++.+++.. ++++..-+. -+.+++.+..+.+.+.|+|.|.+.
T Consensus 692 ~~iv~~v~~~~--~~Pv~vK~~----~~~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 692 RNICRWVRQAV--QIPFFAKLT----PNVTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp HHHHHHHHHHC--SSCEEEEEC----SCSSCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhh--CCceEEEeC----CChHHHHHHHHHHHHcCCCEEEEe
Confidence 88999998863 122222221 122357778888899999999884
No 325
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=32.36 E-value=3.2e+02 Score=25.57 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=65.4
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcc-cHHH-HHHHHHHHHHhC-CCcEEEeecCCCCCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-GSGH-FAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~-G~~~-~~~lir~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
+++.+|++..++++.+ |.+...|+ +|-+..... ..+. +...++.+++.- -.+.||-- .. -.+.++.+.++|
T Consensus 76 ~vTldemi~h~~aV~r-~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg--~e--~~~~I~al~~ag 149 (281)
T 1oy0_A 76 PISIDELIPLVRGVVR-GAPHALVV-ADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGG--ER--VAEQIACLTAAG 149 (281)
T ss_dssp SCCGGGTHHHHHHHHH-HCTTSEEE-EECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBS--GG--GHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh-cCCCCeEE-EECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCc--HH--HHHHHHHHHHCC
Confidence 4788888888877765 34434444 554422110 1222 223455555321 23445432 11 356788888888
Q ss_pred ccccccc-c--cchHHH--HHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE
Q 017200 233 LNVFAHN-I--ETVEEL--QSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM 307 (375)
Q Consensus 233 ldv~~hn-l--Etv~rl--~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v 307 (375)
..++.|- + .++..+ |+.+. |. - ..-+++++++.+... .+.+|+==+=.. +..+ +.-+++.+-.+
T Consensus 150 IpV~gHiGLtPqsv~~~ggf~v~g-rt--~-~a~~~i~rA~a~~eA----GA~~ivlE~vp~-~~a~--~it~~l~iP~i 218 (281)
T 1oy0_A 150 IPVMAHIGFTPQSVNTLGGFRVQG-RG--D-AAEQTIADAIAVAEA----GAFAVVMEMVPA-ELAT--QITGKLTIPTV 218 (281)
T ss_dssp CCEEEEEECCC---------------C--H-HHHHHHHHHHHHHHH----TCSEEEEESCCH-HHHH--HHHHHCSSCEE
T ss_pred CCEEeeecCCcceecccCCeEEEe-Cc--H-HHHHHHHHHHHHHHc----CCcEEEEecCCH-HHHH--HHHHhCCCCEE
Confidence 8888773 2 222211 32222 22 2 446677777764323 455555447654 3333 23344555555
Q ss_pred eee
Q 017200 308 TFG 310 (375)
Q Consensus 308 ~i~ 310 (375)
.||
T Consensus 219 gIG 221 (281)
T 1oy0_A 219 GIG 221 (281)
T ss_dssp EES
T ss_pred EeC
Confidence 553
No 326
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=32.15 E-value=71 Score=30.93 Aligned_cols=67 Identities=12% Similarity=0.139 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVFA 237 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv~~ 237 (375)
.++....++.+.+.|+++|.++++... . +.++.||+..+...| ..+.+ +.+..+.+.+.| +|.+.
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~~~------~----~~~~~ik~~~~iPvi--~~Ggi--t~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESFGG------D----AIGQQLKAAFGGPFI--VNENF--TLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCST------T----CCHHHHHHHHCSCEE--EESSC--CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC------H----HHHHHHHHHcCCCEE--EeCCC--CHHHHHHHHHcCCccEEE
Confidence 456788999999999999999987511 1 234556655432222 33455 678888888877 88776
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 315 iG 316 (361)
T 3gka_A 315 WG 316 (361)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 327
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=32.11 E-value=77 Score=28.54 Aligned_cols=77 Identities=17% Similarity=0.149 Sum_probs=47.2
Q ss_pred HHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHH
Q 017200 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQ 247 (375)
Q Consensus 168 al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~ 247 (375)
..++.|+.+|-.=-|--+|..+.|...+.++.+.++.....+ +++...|+ +...+.....+|+|.+... +.++
T Consensus 118 ~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t--~ilaAS~R-~~~~v~~~a~~G~d~~Tip----~~vl 190 (212)
T 3r8r_A 118 LAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDT--QIIAASIR-HPQHVTEAALRGAHIGTMP----LKVI 190 (212)
T ss_dssp HHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCC--EEEEBSCC-SHHHHHHHHHTTCSEEEEC----HHHH
T ss_pred HHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCCC--EEEEecCC-CHHHHHHHHHcCCCEEEcC----HHHH
Confidence 344568888754333334555556665666666666553333 44555565 6778888888999987542 3666
Q ss_pred HHhc
Q 017200 248 SAVR 251 (375)
Q Consensus 248 ~~mr 251 (375)
+++-
T Consensus 191 ~~l~ 194 (212)
T 3r8r_A 191 HALT 194 (212)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6665
No 328
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=32.04 E-value=92 Score=30.17 Aligned_cols=88 Identities=8% Similarity=0.110 Sum_probs=49.7
Q ss_pred HHHHHHHHcCcccccccccc---hHHHH-HHhcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeE---EEec-
Q 017200 223 GCVREVAKSGLNVFAHNIET---VEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSI---MLGC- 285 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEt---v~rl~-~~mr~r----~~s~~~----~l~vl~~ak~~~p~G-l~tkt~i---mvGl- 285 (375)
+..+..+++|.|.+..|.-. .+..+ +..+.| +.+.+. .+++++.+++..+.. +.++.+. .-|+
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 34456677888877654311 12221 111111 123433 467778888765421 2233321 1122
Q ss_pred -CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 286 -GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 286 -GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
+++.++.++.++.|.+.|++++++.
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 4567788999999999999999885
No 329
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=31.86 E-value=66 Score=30.00 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=49.4
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCC-ccc----HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQG----SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d~G----~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
.+|+++.|..++ =..|+|+=-.+..+. ++| .+.+.++|+.+++. +++|.+++-. +.++++.-++.|.
T Consensus 75 t~emi~ial~~k---P~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~--GIrVSLFIDp---d~~qi~aA~~~GA 146 (260)
T 3o6c_A 75 NDEILNLALKLK---PHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNA--NIEVSLFINP---SLEDIEKSKILKA 146 (260)
T ss_dssp CHHHHHHHHHHC---CSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHT--TCEEEEEECS---CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHC--CCEEEEEeCC---CHHHHHHHHHhCC
Confidence 467777776654 357777644333331 233 45678888888874 7999987732 6789999999999
Q ss_pred ccccc
Q 017200 234 NVFAH 238 (375)
Q Consensus 234 dv~~h 238 (375)
|++..
T Consensus 147 d~IEL 151 (260)
T 3o6c_A 147 QFIEL 151 (260)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98754
No 330
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=31.65 E-value=86 Score=30.06 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=51.3
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCC-cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-c
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L 233 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~-d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l 233 (375)
..+.++....++.+.+. +++|.++.+...+-+ ..+..+..+.++.|++... +.|- ..+.+. +.+..+.+.+.| +
T Consensus 226 g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi-~~Ggi~-t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTS-AVGLIT-TQELAEEILSNERA 301 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEE-EESSCC-CHHHHHHHHHTTSC
T ss_pred CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-cccc-eeeeee-HHHHHHHHHhchhh
Confidence 35678999999999999 999999765321110 0011234566777777643 3332 233432 678888888887 8
Q ss_pred cccccc
Q 017200 234 NVFAHN 239 (375)
Q Consensus 234 dv~~hn 239 (375)
|.+..+
T Consensus 302 D~V~iG 307 (343)
T 3kru_A 302 DLVALG 307 (343)
T ss_dssp SEEEES
T ss_pred HHHHHH
Confidence 887765
No 331
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=31.54 E-value=94 Score=28.46 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=47.6
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeee-----CC-CC-C-----cc---cHH---HHHHHHHHHHHhCCCcEEEeecCCCCC
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVD-----RD-DL-A-----DQ---GSG---HFAQTVRKLKELKPNMLIEALVPDFRG 220 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgd-----r~-dl-~-----d~---G~~---~~~~lir~Ik~~~p~i~Ie~l~pd~~g 220 (375)
..++.+.++.+.+.|++.|++++.. +. .. + .+ |.. ...++++.+++.. ++.|-+ .+...
T Consensus 175 ~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia-~GGI~- 251 (311)
T 1ep3_A 175 VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIG-MGGVA- 251 (311)
T ss_dssp SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEE-CSSCC-
T ss_pred hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEE-ECCcC-
Confidence 4566777888899999999997632 00 00 0 11 111 2357788887754 343322 23332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017200 221 NNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hn 239 (375)
+.+.+..+.++|+|.+..+
T Consensus 252 ~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 252 NAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp SHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 6778888888999987654
No 332
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=31.38 E-value=3.1e+02 Score=25.24 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=77.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCC-C------CC-ChHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD-F------RG-NNGCVREV 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd-~------~g-~~e~l~~L 228 (375)
+++.+..+..+.+.. =++.+-+.+|...-++ .+.+-+.|+..++. ++.+ .++. + .+ -++.++..
T Consensus 23 lg~~~~~d~Le~~g~-yID~lKfg~Gt~~l~~---~~~l~eki~l~~~~--gV~v--~~GGTl~E~~~~qg~~~~yl~~~ 94 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGD-YIDFVKFGWGTSAVID---RDVVKEKINYYKDW--GIKV--YPGGTLFEYAYSKGKFDEFLNEC 94 (251)
T ss_dssp CCHHHHHHHHHHHGG-GCSEEEECTTGGGGSC---HHHHHHHHHHHHTT--TCEE--EECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhh-hcceEEecCceeeecC---HHHHHHHHHHHHHc--CCeE--ECCcHHHHHHHHcCcHHHHHHHH
Confidence 555555555543322 2677777766543222 23344444444432 2333 2322 0 11 25566777
Q ss_pred HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-----CCHHHHHHHHHHHHH
Q 017200 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-----ETPDQVVSTMEKVRA 301 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--G-----ET~ee~~etl~~Lre 301 (375)
++.|.+.+..+-=+ -.-+.+++++.++.+++ .|+.+.+-+ |- + .+.+++++.++.--+
T Consensus 95 k~lGf~~iEiS~G~----------i~l~~~~~~~~I~~~~~---~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 95 EKLGFEAVEISDGS----------SDISLEERNNAIKRAKD---NGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp HHHTCCEEEECCSS----------SCCCHHHHHHHHHHHHH---TTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECCCc----------ccCCHHHHHHHHHHHHH---CCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHH
Confidence 77776655432111 13457889999999999 678776654 44 3 577899999998889
Q ss_pred cCCcEEeee
Q 017200 302 AGVDVMTFG 310 (375)
Q Consensus 302 lgvd~v~i~ 310 (375)
.|.+.|-+=
T Consensus 160 AGA~~ViiE 168 (251)
T 1qwg_A 160 AGADYVIIE 168 (251)
T ss_dssp HTCSEEEEC
T ss_pred CCCcEEEEe
Confidence 999988773
No 333
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=31.24 E-value=1.6e+02 Score=27.11 Aligned_cols=169 Identities=12% Similarity=0.118 Sum_probs=93.4
Q ss_pred CcchHHHHHHHHHhcCCc-EEEEEeee----C-CCCCcccHHHHHHHHHHHHHhC--CCcEEEeecCCCCCChH----HH
Q 017200 158 DPDEPTNVAEAIASWGLD-YVVITSVD----R-DDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDFRGNNG----CV 225 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~-eIvLTsgd----r-~dl~d~G~~~~~~lir~Ik~~~--p~i~Ie~l~pd~~g~~e----~l 225 (375)
++++..+.++.+.+.|++ .|.|.-+. + +++. +..+...+++++|++.. | +.+. +.|++ +.+ ..
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g-~~~e~~~~iv~~vr~~~~~P-v~vK-i~~~~--~~~~~~~~a 178 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLA-YDFEATEKLLKEVFTFFTKP-LGVK-LPPYF--DLVHFDIMA 178 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGG-GCHHHHHHHHHHHTTTCCSC-EEEE-ECCCC--SHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCccccc-CCHHHHHHHHHHHHHhcCCC-EEEE-ECCCC--CHHHHHHHH
Confidence 478899999999999999 88886431 1 1221 12556788999998764 3 3444 45655 432 25
Q ss_pred HHHHHcCccccc-cc-------ccch-HHH-HH---H---hcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCC
Q 017200 226 REVAKSGLNVFA-HN-------IETV-EEL-QS---A---VRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GET 288 (375)
Q Consensus 226 ~~L~~aGldv~~-hn-------lEtv-~rl-~~---~---mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET 288 (375)
+.+.++|+|.+. || ++.. .+. .. . +. ........++.++.+++..+..++ +|..- -.|
T Consensus 179 ~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~s-g~~~~~~~~~~i~~v~~~~~~~ip----vi~~GGI~~ 253 (311)
T 1jub_A 179 EILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIG-GAYIKPTALANVRAFYTRLKPEIQ----IIGTGGIET 253 (311)
T ss_dssp HHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-SGGGHHHHHHHHHHHHTTSCTTSE----EEEESSCCS
T ss_pred HHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccc-cccccHHHHHHHHHHHHhcCCCCC----EEEECCCCC
Confidence 677788998652 22 1200 000 00 0 00 011234557888888885432233 33333 468
Q ss_pred HHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 289 PDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 289 ~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
.+|..+.+. .|.|.|-++.-+- .+-| .+..+-.+.+..+....||..+
T Consensus 254 ~~da~~~l~----~GAd~V~vg~~~l---~~~p---~~~~~i~~~l~~~l~~~g~~si 301 (311)
T 1jub_A 254 GQDAFEHLL----CGATMLQIGTALH---KEGP---AIFDRIIKELEEIMNQKGYQSI 301 (311)
T ss_dssp HHHHHHHHH----HTCSEEEECHHHH---HHCT---HHHHHHHHHHHHHHHHHTCCSG
T ss_pred HHHHHHHHH----cCCCEEEEchHHH---hcCc---HHHHHHHHHHHHHHHHcCCCCH
Confidence 888888773 5899998873210 0011 1112233455566666777544
No 334
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=31.18 E-value=75 Score=30.79 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVFA 237 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv~~ 237 (375)
.++....++.+.+.|+++|.++++... . +.++.||+..+...| ..+.+ +.+..+.+.+.| +|.+.
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~~------~----~~~~~ik~~~~iPvi--~~Ggi--t~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREAD------D----SIGPLIKEAFGGPYI--VNERF--DKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCT------T----CCHHHHHHHHCSCEE--EESSC--CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCC------H----HHHHHHHHHCCCCEE--EeCCC--CHHHHHHHHHcCCccEEE
Confidence 456788899999999999999987511 1 234556655432222 23455 677888888777 88776
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 307 iG 308 (362)
T 4ab4_A 307 FG 308 (362)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 335
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=31.11 E-value=1.3e+02 Score=29.52 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=52.4
Q ss_pred CCcchHHHHHHHHHhcC------CcEEEEEeeeCCC---CCc----ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChH
Q 017200 157 PDPDEPTNVAEAIASWG------LDYVVITSVDRDD---LAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNG 223 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G------~~eIvLTsgdr~d---l~d----~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e 223 (375)
.+.++....++.+.+.| +++|.+.++.... .+. .+. ...+.++.||+... +.|- ..+++ +.+
T Consensus 257 ~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vk~~~~-iPvi-~~G~i--~~~ 331 (402)
T 2hsa_B 257 NPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEE-EEARLMRTLRNAYQ-GTFI-CSGGY--TRE 331 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHH-HHHHHHHHHHHHCS-SCEE-EESSC--CHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCc-chHHHHHHHHHHCC-CCEE-EeCCC--CHH
Confidence 34577889999999999 9999999875432 110 121 23577888888763 3222 34555 677
Q ss_pred HHHHHHHcC-ccccccc
Q 017200 224 CVREVAKSG-LNVFAHN 239 (375)
Q Consensus 224 ~l~~L~~aG-ldv~~hn 239 (375)
..+.+.+.| +|.+..+
T Consensus 332 ~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 332 LGIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHHTTSCSEEEES
T ss_pred HHHHHHHCCCCceeeec
Confidence 778877776 8887765
No 336
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=30.96 E-value=2.5e+02 Score=24.72 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=70.2
Q ss_pred cchHHHHHHHHHhcCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 159 PDEPTNVAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~--~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
++-+....+.+...++ ..++|-=.......+ ...+.+.++.+++. ++.| ..-||......+..|....+|.+
T Consensus 105 ~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~--~~~~~~~l~~l~~~--G~~i--alDdfG~g~ssl~~L~~l~~d~i 178 (259)
T 3s83_A 105 PGLVADVAETLRVNRLPRGALKLEVTESDIMRD--PERAAVILKTLRDA--GAGL--ALDDFGTGFSSLSYLTRLPFDTL 178 (259)
T ss_dssp TTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHC--HHHHHHHHHHHHHH--TCEE--EEECC---CHHHHHHHHSCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcceEEEEECCchhhhC--HHHHHHHHHHHHHC--CCEE--EEECCCCCchhHHHHHhCCCCEE
Confidence 3334444555566665 344443322211112 45567788888875 4544 34456445667888988888887
Q ss_pred cccccchHHHHHHhcCCCCCHHHHHH-HHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 237 AHNIETVEELQSAVRDHRANFKQSLD-VLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 237 ~hnlEtv~rl~~~mr~r~~s~~~~l~-vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
... ..+...+. ........++ ++..+++ .|+. +++---||.+++ +.|+++|++.+- |.|+
T Consensus 179 KiD----~~~v~~~~-~~~~~~~~~~~i~~~a~~---~g~~----viaeGVEt~~~~----~~l~~lG~~~~Q-G~~~ 239 (259)
T 3s83_A 179 KID----RYFVRTMG-NNAGSAKIVRSVVKLGQD---LDLE----VVAEGVENAEMA----HALQSLGCDYGQ-GFGY 239 (259)
T ss_dssp EEC----HHHHHHTT-TCHHHHHHHHHHHHHHHH---TTCE----EEECCCCSHHHH----HHHHHHTCCEEC-BTTT
T ss_pred EEC----HHHHhhhh-cCchHHHHHHHHHHHHHH---CCCe----EEEEeCCCHHHH----HHHHhcCCCEee-cCcc
Confidence 652 24444443 1222233333 3445555 3443 333334998764 578899999763 3444
No 337
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=30.90 E-value=2.9e+02 Score=24.60 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=58.6
Q ss_pred HHHHhcCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchH
Q 017200 167 EAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVE 244 (375)
Q Consensus 167 ~al~~~G~--~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~ 244 (375)
+.+.+.+. +.++++|-+ .+.++.+++..|++.+..+.... ..+....+...|++.+..+...
T Consensus 134 ~~l~~~~~~~~~vii~SF~------------~~~l~~~~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~~~-- 197 (252)
T 3qvq_A 134 EVLKQHWPQDLPLLFSSFN------------YFALVSAKALWPEIARGYNVSAI--PSAWQERLEHLDCAGLHIHQSF-- 197 (252)
T ss_dssp HHHHHHSCTTSCEEEEESC------------HHHHHHHHHHCTTSCEEEECSSC--CTTHHHHHHHHTCSEEEEEGGG--
T ss_pred HHHHHhCcccCCEEEEeCC------------HHHHHHHHHHCCCCcEEEEEecC--chhHHHHHHHcCCeEEecchhh--
Confidence 33444444 467777643 24567777778888777666443 2234455556666655432211
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 245 ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 245 rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+. -+.++.+|+ .|+.+...- -.+.+ .++.+.+.|||.|.-
T Consensus 198 -----~~---------~~~v~~~~~---~G~~v~~WT----vn~~~----~~~~l~~~GVdgIiT 237 (252)
T 3qvq_A 198 -----FD---------VQQVSDIKA---AGYKVLAFT----INDES----LALKLYNQGLDAVFS 237 (252)
T ss_dssp -----CC---------HHHHHHHHH---TTCEEEEEC----CCCHH----HHHHHHHTTCCEEEE
T ss_pred -----CC---------HHHHHHHHH---CCCEEEEEc----CCCHH----HHHHHHHcCCCEEEe
Confidence 11 156777787 577654432 13443 456677899998754
No 338
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=30.80 E-value=62 Score=28.68 Aligned_cols=69 Identities=16% Similarity=0.264 Sum_probs=42.4
Q ss_pred HHHHHHHhc--CCcEEEEEeeeC----CCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccc
Q 017200 164 NVAEAIASW--GLDYVVITSVDR----DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 164 ~~a~al~~~--G~~eIvLTsgdr----~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~ 237 (375)
+.++.+... ++++|.+-++.. .... ....+.++.+++..+++.|.+ .+.. +.+.+..+.++|+|++-
T Consensus 127 e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~----~~~l~~i~~~~~~~~~~pi~v-~GGI--~~~ni~~~~~aGaD~vv 199 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMTVEPGFGGQKFM----PEMMEKVRALRKKYPSLDIEV-DGGL--GPSTIDVAASAGANCIV 199 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEESSCTTCSSCCCC----GGGHHHHHHHHHHCTTSEEEE-ESSC--STTTHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCcccCC----HHHHHHHHHHHHhcCCCCEEE-ECCc--CHHHHHHHHHcCCCEEE
Confidence 334455565 899999866542 1111 123556777777665565543 3333 55778888999999875
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
.+
T Consensus 200 vG 201 (228)
T 1h1y_A 200 AG 201 (228)
T ss_dssp ES
T ss_pred EC
Confidence 53
No 339
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=30.78 E-value=1.6e+02 Score=26.14 Aligned_cols=17 Identities=6% Similarity=0.036 Sum_probs=7.1
Q ss_pred HHHHHHHHHcCCcEEee
Q 017200 293 VSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 293 ~etl~~Lrelgvd~v~i 309 (375)
.+.++..+++|+..|.+
T Consensus 105 ~~~i~~a~~lG~~~v~~ 121 (290)
T 3tva_A 105 KEISDFASWVGCPAIGL 121 (290)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 33334444444444433
No 340
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=30.78 E-value=75 Score=30.33 Aligned_cols=132 Identities=15% Similarity=0.201 Sum_probs=71.8
Q ss_pred HHHHHHHhcCCcEEEEEe-------eeCCCCCcccHHHH-HHHHHHHHHhCCCcEEEeecCCCCCChHH-HHHHHHcC-c
Q 017200 164 NVAEAIASWGLDYVVITS-------VDRDDLADQGSGHF-AQTVRKLKELKPNMLIEALVPDFRGNNGC-VREVAKSG-L 233 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTs-------gdr~dl~d~G~~~~-~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~-l~~L~~aG-l 233 (375)
...+.+.++|++++-||= .-..+ .++|...| .++|+++.+. ++.|.++.- +++. .+.+.-+. +
T Consensus 103 ~~l~~~y~lGvR~~~Lt~n~~N~~~~g~~~-~~~GLT~~G~~vV~emnrl--GmivDlSH~----s~~~~~dvl~~s~~P 175 (325)
T 2i5g_A 103 GYVEVFKQLGVGIVQMCYNTQNLVGTGCYE-RDGGLSGFGREIVAEMNRV--GIMCDLSHV----GSKTSEEVILESKKP 175 (325)
T ss_dssp HHHHHHHHTTEEEEESCCSSBCSSCBBTTS-CCCCCCHHHHHHHHHHHHH--TCEEECTTB----CHHHHHHHHHHCSSC
T ss_pred HHHHHHHHcCCeEEEeeccCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHc--CcEEEcCcC----CHHHHHHHHHHhCCC
Confidence 366788899999999982 11111 34454444 4577777665 577776532 2233 33333232 2
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-----CCCHHHHHHHHHHHHHc-CCcEE
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-----GETPDQVVSTMEKVRAA-GVDVM 307 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-----GET~ee~~etl~~Lrel-gvd~v 307 (375)
=++.|. ....+.+. +|..+ -+.++.+.+. .|+ +...+.-+| .-|.++++++++.+.++ |++.|
T Consensus 176 vi~SHs--n~~al~~h--~RNl~----De~irala~~--GGv-igv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhV 244 (325)
T 2i5g_A 176 VCYSHC--LPSGLKEH--PRNKS----DEELKFIADH--GGF-VGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAI 244 (325)
T ss_dssp CEEEEE--CBTTTCCC--TTSBC----HHHHHHHHHT--TCE-EEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEeCC--CccccCCC--CCCCC----HHHHHHHHHc--CCe-EEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceE
Confidence 345563 11122111 12222 3455555553 343 333332222 35899999999988764 88888
Q ss_pred eeecCC
Q 017200 308 TFGQYM 313 (375)
Q Consensus 308 ~i~qYl 313 (375)
.||.=+
T Consensus 245 giGsDf 250 (325)
T 2i5g_A 245 GIGTDF 250 (325)
T ss_dssp EECCCB
T ss_pred EECCcC
Confidence 887433
No 341
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=30.22 E-value=2.5e+02 Score=26.93 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=83.5
Q ss_pred CCcchHHHHHHHHHhc-CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHH
Q 017200 157 PDPDEPTNVAEAIASW-GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREV 228 (375)
Q Consensus 157 ld~eEi~~~a~al~~~-G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L 228 (375)
.++++..+.++++.+. |++.+-|=-|.. + .+.=.+.|++|++.. |++.+.+ |..+ +. +.++.|
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~-~-----~~~d~~~v~avR~a~G~~~~l~v---DaN~~~~~~~A~~~~~~l 236 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG-D-----LATDEAMIKGLRALLGPDIALML---DFNQSLDPAEATRRIARL 236 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS-C-----HHHHHHHHHHHHHHHCTTSEEEE---ECTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC-C-----HHHHHHHHHHHHHHhCCCCeEEE---eCCCCCCHHHHHHHHHHH
Confidence 4688999999999898 999998765421 1 334467888888875 6665532 2211 22 234444
Q ss_pred HHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEe
Q 017200 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (375)
Q Consensus 229 ~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~ 308 (375)
.+.|++.+ |-- + +..++ +.++.+++.. +++ +-.||+.....+..+.++.-.+|++.
T Consensus 237 ~~~~i~~i----EeP------~--~~~d~----~~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~a~d~v~ 292 (383)
T 3toy_A 237 ADYDLTWI----EEP------V--PQENL----SGHAAVRERS--EIP------IQAGENWWFPRGFAEAIAAGASDFIM 292 (383)
T ss_dssp GGGCCSEE----ECC------S--CTTCH----HHHHHHHHHC--SSC------EEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred HhhCCCEE----ECC------C--CcchH----HHHHHHHhhc--CCC------EEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 44454433 310 1 12233 3344455421 232 23356666666666666666677765
Q ss_pred eecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 309 i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
+- + ..+-. ..+..++..+|++.|...+..+
T Consensus 293 ik----~----~~~GG---it~~~~ia~~A~~~gi~~~~h~ 322 (383)
T 3toy_A 293 PD----L----MKVGG---ITGWLNVAGQADAASIPMSSHI 322 (383)
T ss_dssp CC----T----TTTTH---HHHHHHHHHHHHHHTCCBCCCS
T ss_pred eC----c----cccCC---HHHHHHHHHHHHHcCCEEeecC
Confidence 52 2 22111 3456677778888888765544
No 342
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=29.97 E-value=11 Score=34.00 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++.+.++.+.+.|+++|.+|+.+++... .|. -.++++.|++.. ++.|-+ .+.. .+.+.+..+.++|+|.+..+
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~-~g~--~~~~~~~i~~~~-~iPvia-~GGI-~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGY--DTEMIRFVRPLT-TLPIIA-SGGA-GKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCc-CCC--CHHHHHHHHHhC-CCCEEE-ECCC-CCHHHHHHHHHcCCcHhhcc
Confidence 4555677778899999999987654322 122 235666776542 222211 1122 15677888888898876543
No 343
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=29.95 E-value=1.7e+02 Score=29.29 Aligned_cols=81 Identities=20% Similarity=0.271 Sum_probs=52.6
Q ss_pred cEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCC
Q 017200 209 MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGET 288 (375)
Q Consensus 209 i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET 288 (375)
+.+.+..+......+.++.+.++|+|++..+.- + ......++.++.+++.+|. +. +++|-.-|
T Consensus 220 L~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a---------~---g~~~~~~~~i~~ir~~~p~-~~----Vi~g~v~t 282 (496)
T 4fxs_A 220 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSS---------H---GHSEGVLQRIRETRAAYPH-LE----IIGGNVAT 282 (496)
T ss_dssp BCCEEECCSSSCCHHHHHHHHHTTCSEEEEECS---------C---TTSHHHHHHHHHHHHHCTT-CC----EEEEEECS
T ss_pred eeeeeeeccccchHHHHHHHHhccCceEEeccc---------c---ccchHHHHHHHHHHHHCCC-ce----EEEcccCc
Confidence 334333333222578899999999998765421 1 1236778999999997764 43 33355456
Q ss_pred HHHHHHHHHHHHHcCCcEEeee
Q 017200 289 PDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 289 ~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.++ .+.+.+.|+|.|.++
T Consensus 283 ~e~----a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 283 AEG----ARALIEAGVSAVKVG 300 (496)
T ss_dssp HHH----HHHHHHHTCSEEEEC
T ss_pred HHH----HHHHHHhCCCEEEEC
Confidence 655 466778899999884
No 344
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=29.54 E-value=1.7e+02 Score=22.41 Aligned_cols=39 Identities=5% Similarity=0.001 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 68 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~ga~~~ 106 (136)
T 3kto_A 68 IELLETLVKRGFHLPTIVMASSS--DIPTAVRAMRASAADF 106 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEESSC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCCCCEEEEEcCC--CHHHHHHHHHcChHHh
Confidence 57888888887887777676654 5666777778887754
No 345
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=29.53 E-value=3.7e+02 Score=25.52 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=41.8
Q ss_pred HHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHH
Q 017200 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRA 301 (375)
Q Consensus 223 e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lre 301 (375)
..++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.. | +.-+|+|.| .+-+|.++..+...+
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~----g---rvpViaGvg~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDW-------PLLTDEQRMEGVERLVK----A---GIPVIVGTGAVNTASAVAHAVHAQK 116 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTG-------GGSCHHHHHHHHHHHHH----T---TCCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccCcCh-------hhCCHHHHHHHHHHHhC----C---CCcEEEecCCCCHHHHHHHHHHHHh
Confidence 34555666777654222112120 12356677777766211 2 234778884 566778888888888
Q ss_pred cCCcEEee
Q 017200 302 AGVDVMTF 309 (375)
Q Consensus 302 lgvd~v~i 309 (375)
+|+|.+-+
T Consensus 117 ~Gadavlv 124 (344)
T 2hmc_A 117 VGAKGLMV 124 (344)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 88876554
No 346
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=29.39 E-value=1.2e+02 Score=22.96 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 62 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 100 (134)
T 3f6c_A 62 IQVLETLRKRQYSGIIIIVSAKN--DHFYGKHCADAGANGF 100 (134)
T ss_dssp HHHHHHHHHTTCCSEEEEEECC-----CTHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC--ChHHHHHHHHhCCCEE
Confidence 46778888877877776666543 3445666777887654
No 347
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=29.37 E-value=3.4e+02 Score=26.08 Aligned_cols=153 Identities=12% Similarity=0.046 Sum_probs=80.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCC---C-CC-----------c--ccHHHHHHHHHHHHHhC-CCcEEEeecCCCC
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRD---D-LA-----------D--QGSGHFAQTVRKLKELK-PNMLIEALVPDFR 219 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~---d-l~-----------d--~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~ 219 (375)
+++++.+.++.+.+.|++.+-|--|..+ | .+ + ...+.-.+.|++|++.. |++.+.+ |..
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~v---Dan 209 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILH---DVH 209 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEE---ECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEE---ECC
Confidence 5789999999999999999988654321 0 00 0 01345678889998876 5665543 221
Q ss_pred C--ChH----HHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHH
Q 017200 220 G--NNG----CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVV 293 (375)
Q Consensus 220 g--~~e----~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~ 293 (375)
+ +.+ .++.|.+.|++.+ |- - +. ..+ ++.++.+++.. +++ |+ .||+.....
T Consensus 210 ~~~~~~~A~~~~~~L~~~~i~~i----Eq---P---~~--~~~----~~~~~~l~~~~--~iP----Ia--~dE~~~~~~ 265 (401)
T 3sbf_A 210 ERLFPNQAIQFAKEVEQYKPYFI----ED---I---LP--PNQ----TEWLDNIRSQS--SVS----LG--LGELFNNPE 265 (401)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSCE----EC---S---SC--TTC----GGGHHHHHTTC--CCC----EE--ECTTCCSHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEE----EC---C---CC--hhH----HHHHHHHHhhC--CCC----EE--eCCccCCHH
Confidence 1 322 2344445554433 21 0 11 122 23344555421 122 33 345544444
Q ss_pred HHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhcc
Q 017200 294 STMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (375)
Q Consensus 294 etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (375)
+..+.++.-.+|++.+- + ..+-. ..+...+..+|...|......
T Consensus 266 ~~~~~i~~~~~d~v~~k----~----~~~GG---it~~~kia~~A~~~gi~~~~h 309 (401)
T 3sbf_A 266 EWKSLIANRRIDFIRCH----V----SQIGG---ITPALKLGHLCQNFGVRIAWH 309 (401)
T ss_dssp HHHHHHHTTCCSEECCC----G----GGGTS---HHHHHHHHHHHHHHTCEECCC
T ss_pred HHHHHHhcCCCCEEecC----c----cccCC---HHHHHHHHHHHHHcCCEEEec
Confidence 44455555567776542 2 11111 345667777788878765443
No 348
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=29.30 E-value=1.5e+02 Score=28.36 Aligned_cols=87 Identities=14% Similarity=0.260 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017200 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (375)
Q Consensus 195 ~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~G 274 (375)
+.+.+++.++..|...|++.+- +.+.+++..++|+|++-. ++ .+.++--++++.++. .
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVd----tldea~eAl~aGaD~I~L--Dn------------~~~~~l~~av~~l~~---~- 275 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETE----TLAELEEAISAGADIIML--DN------------FSLEMMREAVKINAG---R- 275 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES----SHHHHHHHHHTTCSEEEE--ES------------CCHHHHHHHHHHHTT---S-
T ss_pred HHHHHHHHHHhCCCCeEEEEEC----CHHHHHHHHHcCCCEEEE--CC------------CCHHHHHHHHHHhCC---C-
Confidence 4567788888888877777664 346777788899987642 22 122222222222211 1
Q ss_pred ceE-EEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 275 TLT-KTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 275 l~t-kt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+.+ -|+ |=|. +.+..+.+.|+|++.+|..
T Consensus 276 v~ieaSG-----GIt~----~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 276 AALENSG-----NITL----DNLKECAETGVDYISVGAL 305 (320)
T ss_dssp SEEEEES-----SCCH----HHHHHHHTTTCSEEECTHH
T ss_pred CeEEEEC-----CCCH----HHHHHHHHcCCCEEEECce
Confidence 222 111 3354 4455667899999999854
No 349
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=29.20 E-value=3.6e+02 Score=25.19 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=0.0
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeee-----------CCCCCcccHHHHHHHHHHHHHhC--CCcEEEeecCCC------
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVD-----------RDDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDF------ 218 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgd-----------r~dl~d~G~~~~~~lir~Ik~~~--p~i~Ie~l~pd~------ 218 (375)
+++++.+.++.+.+.|+.-|.|=++. ...+.+ .+.+++.|+++++.. ++..|-+=+..+
T Consensus 92 ~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p--~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 169 (295)
T 1s2w_A 92 NFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLAD--IEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGL 169 (295)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCC--HHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccC--HHHHHHHHHHHHHhcccCCcEEEEeehHHhccccH
Q ss_pred CCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHH
Q 017200 219 RGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEK 298 (375)
Q Consensus 219 ~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~ 298 (375)
..-.+....+.++|.|.+= +-....+.++..++.+.+.. . +++-.. |..+|.+. .+.
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~------------~e~~~~~~~~~~~i~~~~~~---~-~P~i~~-~~~~~~~~------~~e 226 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAIL------------MHSKKADPSDIEAFMKAWNN---Q-GPVVIV-PTKYYKTP------TDH 226 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEE------------ECCCSSSSHHHHHHHHHHTT---C-SCEEEC-CSTTTTSC------HHH
T ss_pred HHHHHHHHHHHHcCCCEEE------------EcCCCCCHHHHHHHHHHcCC---C-CCEEEe-CCCCCCCC------HHH
Q ss_pred HHHcCCcEEeee
Q 017200 299 VRAAGVDVMTFG 310 (375)
Q Consensus 299 Lrelgvd~v~i~ 310 (375)
|.++|+.++.++
T Consensus 227 L~~lGv~~v~~~ 238 (295)
T 1s2w_A 227 FRDMGVSMVIWA 238 (295)
T ss_dssp HHHHTCCEEEEC
T ss_pred HHHcCCcEEEEC
No 350
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=29.04 E-value=3.2e+02 Score=27.31 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=41.8
Q ss_pred CCcchHHHHHHHHHhcC---------CcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHH
Q 017200 157 PDPDEPTNVAEAIASWG---------LDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G---------~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (375)
++.+++...++.+.++- ++-|.|...- .| .+.+..+|+.|.+.. ++.+.+-+. +.+.++.
T Consensus 102 ~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s----~d--pe~~~~vVk~V~e~~-dvPL~IDS~----dpevlea 170 (446)
T 4djd_C 102 LSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDA----DD--PAAFKAAVASVAAAT-QLNLVLMAD----DPDVLKE 170 (446)
T ss_dssp SCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCS----SS--THHHHHHHHHHHTTC-CSEEEEECS----CHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCC----CC--HHHHHHHHHHHHHhC-CCCEEEecC----CHHHHHH
Confidence 45577877787776543 3333333211 11 467999999998754 455554442 6788888
Q ss_pred HHHcCccc
Q 017200 228 VAKSGLNV 235 (375)
Q Consensus 228 L~~aGldv 235 (375)
..+++.+.
T Consensus 171 ALea~a~~ 178 (446)
T 4djd_C 171 ALAGVADR 178 (446)
T ss_dssp HHGGGGGG
T ss_pred HHHhhcCc
Confidence 88777553
No 351
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=29.04 E-value=3.5e+02 Score=25.00 Aligned_cols=166 Identities=13% Similarity=0.123 Sum_probs=96.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.+++.+.++++.+.|+.-|++... +....+...+ ..++.|.+.++.-.|. ....+...+
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~p~------------~V~~a~~~L~-gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 122 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVNPC------------YVKLAREELE-GTDVKVVTVVGFPLGANETRTKAHEAIFAVE 122 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECGG------------GHHHHHHHHT-TSCCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHhc-CCCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 56789999999999999999987421 2233322222 2357777766433332 223344455
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i 309 (375)
.|.|-+..-+ + + ..+. ..+|+..++-++.+++..+ |..+| +|+=-| -|++++....+...++|.|+|.-
T Consensus 123 ~GAdEIDmVi---N-i-g~lk--~g~~~~v~~eI~~v~~a~~-~~~lK--VIlEt~~Lt~eei~~A~~ia~eaGADfVKT 192 (260)
T 3r12_A 123 SGADEIDMVI---N-V-GMLK--AKEWEYVYEDIRSVVESVK-GKVVK--VIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp HTCSEEEEEC---C-H-HHHH--TTCHHHHHHHHHHHHHHTT-TSEEE--EECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred cCCCEEEEEe---e-h-hhhc--cccHHHHHHHHHHHHHhcC-CCcEE--EEEeCCCCCHHHHHHHHHHHHHhCcCEEEc
Confidence 5766543211 1 1 1222 3468888888888888764 45443 344332 28899999999999999999977
Q ss_pred ecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccchhhhhh
Q 017200 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (375)
Q Consensus 310 ~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (375)
..=+.| .-.+++..+.+++... -.....+|| -+|+.
T Consensus 193 STGf~~--------~GAT~edV~lm~~~vg-~~v~VKaAG-GIrt~ 228 (260)
T 3r12_A 193 STGFGT--------GGATAEDVHLMKWIVG-DEMGVKASG-GIRTF 228 (260)
T ss_dssp CCSSSS--------CCCCHHHHHHHHHHHC-TTSEEEEES-SCCSH
T ss_pred CCCCCC--------CCCCHHHHHHHHHHhC-CCceEEEeC-CCCCH
Confidence 421212 1124555666655431 122344677 57753
No 352
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=28.70 E-value=90 Score=29.84 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=62.8
Q ss_pred ChHHHHHHHHcCcccccccccchH-HHHHH-hc-C--CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHH
Q 017200 221 NNGCVREVAKSGLNVFAHNIETVE-ELQSA-VR-D--HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVST 295 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hnlEtv~-rl~~~-mr-~--r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~et 295 (375)
|.-....+.++|.|.+-.+ + .+-.. .. | ...++++.+..++.+.+..+. +++-.++=.|+| +.+++.++
T Consensus 48 D~~sA~i~e~aGfdai~vs----~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~-~PviaD~d~Gyg-~~~~v~~t 121 (318)
T 1zlp_A 48 DALSAAVVEKTGFHAAFVS----GYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPN-LCVVVDGDTGGG-GPLNVQRF 121 (318)
T ss_dssp SHHHHHHHHHTTCSEEEEC----HHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSS-SEEEEECTTCSS-SHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEC----cHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccC-CCEEEeCCCCCC-CHHHHHHH
Confidence 4455666777888876432 1 11101 11 1 257899999999999987765 789999999999 89999999
Q ss_pred HHHHHHcCCcEEeee
Q 017200 296 MEKVRAAGVDVMTFG 310 (375)
Q Consensus 296 l~~Lrelgvd~v~i~ 310 (375)
...+.+.|+..|+|=
T Consensus 122 v~~l~~aGaagv~iE 136 (318)
T 1zlp_A 122 IRELISAGAKGVFLE 136 (318)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHHcCCcEEEEC
Confidence 999999999999983
No 353
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=28.67 E-value=4e+02 Score=25.60 Aligned_cols=153 Identities=15% Similarity=0.145 Sum_probs=81.6
Q ss_pred CcchHHHHH-HHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch----HHHHHHH
Q 017200 158 DPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (375)
Q Consensus 158 d~eEi~~~a-~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (375)
+++++.+.+ +.+.+.|++.+-|=-|........+.+.-.+.|++|++.. |++.+.+ |..+ +. +.++.|.
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~v---DaN~~~~~~~A~~~~~~L~ 215 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGF---DANNGYSVGGAIRVGRALE 215 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEE---ECTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 478898989 8888999999988654321100012455678888998875 5554432 2211 22 2345555
Q ss_pred HcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
+.|++.+ |- -+. ..+ ++.++.+++.. +++ +-.||+.....+..+.++.- +|++.+
T Consensus 216 ~~~i~~i----Eq------P~~--~~d----~~~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~-~d~v~~ 270 (393)
T 4dwd_A 216 DLGYSWF----EE------PVQ--HYH----VGAMGEVAQRL--DIT------VSAGEQTYTLQALKDLILSG-VRMVQP 270 (393)
T ss_dssp HTTCSEE----EC------CSC--TTC----HHHHHHHHHHC--SSE------EEBCTTCCSHHHHHHHHHHT-CCEECC
T ss_pred hhCCCEE----EC------CCC--ccc----HHHHHHHHhhC--CCC------EEecCCcCCHHHHHHHHHcC-CCEEEe
Confidence 6565543 21 011 123 34445555521 122 33456554444444445555 777655
Q ss_pred ecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 310 ~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
- + ..+-. ..+..++..+|.+.|......+
T Consensus 271 k----~----~~~GG---it~~~~ia~~A~~~gi~~~~h~ 299 (393)
T 4dwd_A 271 D----I----VKMGG---ITGMMQCAALAHAHGVEFVPHQ 299 (393)
T ss_dssp C----T----TTTTH---HHHHHHHHHHHHHHTCEECCCC
T ss_pred C----c----cccCC---HHHHHHHHHHHHHcCCEEeecC
Confidence 2 2 11111 3456677778888887665433
No 354
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=28.64 E-value=2.3e+02 Score=25.13 Aligned_cols=83 Identities=10% Similarity=0.188 Sum_probs=40.0
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEE-----EecCCC--------
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIM-----LGCGET-------- 288 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~im-----vGlGET-------- 288 (375)
.+.++.++++|.+.+......... .+.+...+.++.-++-+.+++ .|+.+.+--. +.++..
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~---~~~~~~~~~~~~~~~~~~l~~---~gl~i~~~~~~~~~~~~l~~~d~~~r~~~ 106 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDE---RLSRLDWSREQRLALVNAIVE---TGVRVPSMCLSAHRRFPLGSEDDAVRAQG 106 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHH---HHGGGGCCHHHHHHHHHHHHH---HCCEEEEEEEGGGGTSCTTCSSHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCccc---ccCcccCCHHHHHHHHHHHHH---cCCeEEEEecCcccCCCCCCCCHHHHHHH
Confidence 567777777777766544322111 111011233333344444444 3565433111 113221
Q ss_pred HHHHHHHHHHHHHcCCcEEeee
Q 017200 289 PDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 289 ~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.+.+.+.++...++|+..|.+.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEC
Confidence 2445666677777888777663
No 355
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=28.62 E-value=2.7e+02 Score=25.31 Aligned_cols=119 Identities=16% Similarity=0.082 Sum_probs=0.0
Q ss_pred HHHHHhcCCcEEEEEe--eeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCC--------CChHHHHHH----HHc
Q 017200 166 AEAIASWGLDYVVITS--VDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR--------GNNGCVREV----AKS 231 (375)
Q Consensus 166 a~al~~~G~~eIvLTs--gdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~--------g~~e~l~~L----~~a 231 (375)
++++.+.|++.|-++- ++.+ ...+.+.++++++......+.++.-.+. .+.+.+... .++
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~~~------~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~ 171 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGSGF------EWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALEL 171 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTSTT------HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCCcC------HHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHc
Q ss_pred CcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 232 Gldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
|+|.+.-+ +. ..++.++.+++..+. ++++..- |. .+|.+++++.+..+.+.|.+.+.++
T Consensus 172 GAD~vkt~--~~---------------~~~e~~~~~~~~~~~-~pV~asG--Gi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 172 GADAMKIK--YT---------------GDPKTFSWAVKVAGK-VPVLMSG--GPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp TCSEEEEE--CC---------------SSHHHHHHHHHHTTT-SCEEEEC--CSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEc--CC---------------CCHHHHHHHHHhCCC-CeEEEEe--CCCCCCHHHHHHHHHHHHHcCCeEEEEe
No 356
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=28.60 E-value=1.5e+02 Score=28.01 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=49.4
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE--------------ec-C
Q 017200 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML--------------GC-G 286 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv--------------Gl-G 286 (375)
.+.++.|++.|++.+-.-+..-+. +...+.+..+++++.|++ .||.+--++-. |. +
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~------~g~~d~~~~~~~~~~ak~---~Gl~v~ld~hysd~wadP~~q~~p~~W~~ 100 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPS------DGSYDLDYNLELAKRVKA---AGMSLYLDLHLSDTWADPSDQTTPSGWST 100 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCT------TCTTCHHHHHHHHHHHHH---TTCEEEEEECCSSSCCBTTBCBCCTTSCS
T ss_pred chHHHHHHHcCCCEEEEEEEECCC------CCccCHHHHHHHHHHHHH---CCCEEEEEeccCCCCCCcccccCcccccc
Confidence 456788888888776543321011 234678999999999999 68765554432 12 2
Q ss_pred CCHHHHH--------HHHHHHHHcC--CcEEeeecC
Q 017200 287 ETPDQVV--------STMEKVRAAG--VDVMTFGQY 312 (375)
Q Consensus 287 ET~ee~~--------etl~~Lrelg--vd~v~i~qY 312 (375)
.+.+++. +.+..|++.+ ++++.+++=
T Consensus 101 ~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE 136 (334)
T 1fob_A 101 TDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNE 136 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSS
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeec
Confidence 2333433 4555666654 677877643
No 357
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=28.50 E-value=2.2e+02 Score=27.27 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=34.9
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEE
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE 212 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie 212 (375)
++++..+.++++.+.|++.+-|=-|.. + .+.-.+.|++|++..|++.+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~-~-----~~~d~~~v~avR~a~~~~~l~ 196 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFR-D-----HAFDIMRLELIARDFPEFRVR 196 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSS-C-----HHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC-C-----HHHHHHHHHHHHHhCCCCeEE
Confidence 567888888888888999988764421 1 334467888888877776554
No 358
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=28.33 E-value=2.7e+02 Score=26.90 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=36.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEe-------------eeC----CCC--CcccHHHHHHHHHHHHHhC-CCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITS-------------VDR----DDL--ADQGSGHFAQTVRKLKELK-PNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTs-------------gdr----~dl--~d~G~~~~~~lir~Ik~~~-p~i~Ie 212 (375)
.+++++.+.++.+.+.|++.+-|-- |.. ++. .....+.-.+.|++|++.. |++.|.
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~ 217 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEIL 217 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 5789999999999999999998753 111 111 0011344577888898876 666554
No 359
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=28.31 E-value=2.2e+02 Score=26.74 Aligned_cols=86 Identities=12% Similarity=0.043 Sum_probs=53.9
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCccc--HHHHHHHHHHHHHh-CCCcEEEeecCCCCCChHHHHHHHHcCc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG--SGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGL 233 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G--~~~~~~lir~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (375)
|+.+|+.+.++...+.|.++|--+.|-.. +| .+. .++++++.+. -+.+.|.+.-+-- +.+....+.++|.
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~~----~GAT~ed-v~lmr~~v~~~g~~v~VKAAGGIr--t~edAl~mi~aGA 257 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFNG----PGASIEN-VSLMSAVCDSLQSETRVKASGGIR--TIEDCVKMVRAGA 257 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSSS----CCCCHHH-HHHHHHHHHHSSSCCEEEEESSCC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCCC----CCCCHHH-HHHHHHHHHHhCCCceEEEeCCCC--CHHHHHHHHHcCC
Confidence 67889998888889999999985544211 12 122 3445554432 2557777654422 6678888889999
Q ss_pred ccccccccchHHHHHHhc
Q 017200 234 NVFAHNIETVEELQSAVR 251 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr 251 (375)
+++.- .....+++..+
T Consensus 258 ~RiGt--S~g~~I~~~~~ 273 (288)
T 3oa3_A 258 ERLGA--SAGVKIVNETR 273 (288)
T ss_dssp SEEEE--SCHHHHHHHHT
T ss_pred ceeeh--hhHHHHHHHHH
Confidence 97753 22335555544
No 360
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=28.26 E-value=3.9e+02 Score=25.32 Aligned_cols=192 Identities=14% Similarity=0.172 Sum_probs=105.0
Q ss_pred HHHHHHhcCCcEEEEEee-e---CCCCCcc---cHHHHHHHHHHHHHhCCCcEEEeecCCCCCC----hHHHHHHHHcCc
Q 017200 165 VAEAIASWGLDYVVITSV-D---RDDLADQ---GSGHFAQTVRKLKELKPNMLIEALVPDFRGN----NGCVREVAKSGL 233 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsg-d---r~dl~d~---G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~----~e~l~~L~~aGl 233 (375)
.|+.+.+.|++-|.++|- . .--+||. ..+.++..++.|.+..+++.|-+=.|.-.|+ .+.+..+.++|+
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGa 130 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGA 130 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCC
Confidence 356677889988887772 1 1223443 3667777788888777666554322221234 345677888897
Q ss_pred ccccccccchHHHHHHhcCC-----CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCH-----HHHHHHHHHHHHcC
Q 017200 234 NVFAHNIETVEELQSAVRDH-----RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETP-----DQVVSTMEKVRAAG 303 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r-----~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~-----ee~~etl~~Lrelg 303 (375)
..+. ||-- ...+.|.. =.+.++..+.|+.+++.... .--+|.|=.+.. ++.++-.+.+.+.|
T Consensus 131 agv~--iED~--~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~----~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAG 202 (318)
T 1zlp_A 131 KGVF--LEDQ--VWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD----SDFFLVARTDARAPHGLEEGIRRANLYKEAG 202 (318)
T ss_dssp CEEE--EECB--CSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT----SCCEEEEEECTHHHHHHHHHHHHHHHHHHTT
T ss_pred cEEE--ECCC--CCCccccCCCCCccCCHHHHHHHHHHHHHhccc----CCcEEEEeeHHhhhcCHHHHHHHHHHHHHcC
Confidence 7554 4521 11222210 13355666666666664211 112333333443 46777777888889
Q ss_pred CcEEeeecCCCCCC---------CCCCcc-ccC----CH-HHHHHHHHHHHHhhhhhhccc-hhhhhhcchhHHHHHHHH
Q 017200 304 VDVMTFGQYMRPSK---------RHMPVS-EYI----TP-EAFERYRALGMEMGFRYVASG-PMVRSSYKVVGWCYYLIF 367 (375)
Q Consensus 304 vd~v~i~qYl~P~~---------~~~~v~-~~v----~p-e~~~~l~~~a~~~gf~~~~sg-p~vrssy~a~~~~~~~~~ 367 (375)
.|.|-+ .-+ |+. -+.|+. +.+ +| -..++|. ++||..+.-| -+.|+.++|-+...+.|.
T Consensus 203 Ad~i~~-e~~-~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~----~lGv~~v~~~~~~~raa~~a~~~~~~~l~ 276 (318)
T 1zlp_A 203 ADATFV-EAP-ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFK----EMGFHLIAHSLTAVYATARALVNIMKILK 276 (318)
T ss_dssp CSEEEE-CCC-CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHH----HHTCCEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEE-cCC-CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHH----HcCCeEEEEchHHHHHHHHHHHHHHHHHH
Confidence 887765 222 321 022321 100 11 0133443 5688777543 368999999888888887
Q ss_pred hhh
Q 017200 368 NYR 370 (375)
Q Consensus 368 ~~~ 370 (375)
+..
T Consensus 277 ~~g 279 (318)
T 1zlp_A 277 EKG 279 (318)
T ss_dssp HHS
T ss_pred HcC
Confidence 654
No 361
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=28.25 E-value=3.2e+02 Score=24.33 Aligned_cols=80 Identities=13% Similarity=0.230 Sum_probs=42.6
Q ss_pred hHHHHHHHHcCcccccccccc---------hH-HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHH
Q 017200 222 NGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQ 291 (375)
Q Consensus 222 ~e~l~~L~~aGldv~~hnlEt---------v~-rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee 291 (375)
.+.++.+.++|+|.+..++.. +. .....+. .+.+.+..++.++.+++.. . ++ ..+| +-..-.
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~-~g~~~~~~~~~i~~ir~~~-~-~P--v~~m---~~~~~~ 106 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALA-SGTTMDAVLEMLREVTPEL-S-CP--VVLL---SYYKPI 106 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHT-TTCCHHHHHHHHHHHGGGC-S-SC--EEEE---CCSHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcC-C-CC--EEEE---ecCcHH
Confidence 445667777888877665321 11 1122233 4567788888888888742 1 33 1222 211112
Q ss_pred HHHHHHHHHHcCCcEEee
Q 017200 292 VVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 292 ~~etl~~Lrelgvd~v~i 309 (375)
+...++.+.+.|+|.+++
T Consensus 107 ~~~~~~~a~~aGadgv~v 124 (262)
T 1rd5_A 107 MFRSLAKMKEAGVHGLIV 124 (262)
T ss_dssp HSCCTHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 222233477788887776
No 362
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=28.13 E-value=2.1e+02 Score=26.88 Aligned_cols=147 Identities=13% Similarity=0.148 Sum_probs=73.1
Q ss_pred HHHHHHhcCCcEEEEEeeeCCCCCc-----ccHHHHHHHHHHHHHhCCCcE-EEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 165 VAEAIASWGLDYVVITSVDRDDLAD-----QGSGHFAQTVRKLKELKPNML-IEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr~dl~d-----~G~~~~~~lir~Ik~~~p~i~-Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.+++..+.|++.|.+---...-+.. ....++.++++.+++..|++. +.. ... ....+..+.+.|+|++..
T Consensus 198 ~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~-c~g---~~~~l~~l~~~g~d~~~~ 273 (353)
T 1j93_A 198 YIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILY-ASG---SGGLLERLPLTGVDVVSL 273 (353)
T ss_dssp HHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEE-CSS---CTTTGGGGGGGCCSEEEC
T ss_pred HHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEE-CCC---hHHHHHHHHhcCCCEEEe
Confidence 4455667899876543111011111 123455667777876543332 222 222 334677888999998764
Q ss_pred cccchH--HHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEeeecCCCC
Q 017200 239 NIETVE--ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFGQYMRP 315 (375)
Q Consensus 239 nlEtv~--rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel-gvd~v~i~qYl~P 315 (375)
.- +++ ++.+.+.+ + ..+-.++. +.++ -+|.|++.+..+.+-+. +....- +.|
T Consensus 274 d~-~~d~~~~~~~~g~-~--------------~~l~Gnld--p~~l---~~~~e~i~~~v~~~l~~~~~~g~I----~~~ 328 (353)
T 1j93_A 274 DW-TVDMADGRRRLGP-N--------------VAIQGNVD--PGVL---FGSKEFITNRINDTVKKAGKGKHI----LNL 328 (353)
T ss_dssp CT-TSCHHHHHHHTCS-S--------------SEEECCBC--GGGG---GSCHHHHHHHHHHHHHHHCSSSEE----BCB
T ss_pred CC-CCCHHHHHHHcCC-C--------------eEEEecCC--HHHH---cCCHHHHHHHHHHHHHHhCCCCEE----EeC
Confidence 21 111 22111210 0 00001222 2332 36899988877766543 542111 234
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHhhh
Q 017200 316 SKRHMPVSEYITPEAFERYRALGMEMGF 343 (375)
Q Consensus 316 ~~~~~~v~~~v~pe~~~~l~~~a~~~gf 343 (375)
+ .-+...+.++....+.+.+.+.||
T Consensus 329 g---~gi~~~~~~enl~a~ve~v~~~~~ 353 (353)
T 1j93_A 329 G---HGIKVGTPEENFAHFFEIAKGLRY 353 (353)
T ss_dssp S---SCCCTTCCHHHHHHHHHHHHTCCC
T ss_pred C---CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 2 123345678888888888876553
No 363
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=28.12 E-value=26 Score=30.64 Aligned_cols=45 Identities=22% Similarity=0.318 Sum_probs=31.6
Q ss_pred HHHHHHhcCCcEEEEEeeeCCCCCcccH-HHHHHHHHHHHHhCCCcEEEeecC
Q 017200 165 VAEAIASWGLDYVVITSVDRDDLADQGS-GHFAQTVRKLKELKPNMLIEALVP 216 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr~dl~d~G~-~~~~~lir~Ik~~~p~i~Ie~l~p 216 (375)
....+.+.|+.. +|+||.. |+ .+.++++..+|+.+|++.+.+++|
T Consensus 35 ~l~~l~~~G~~~-~isgga~------G~D~~aae~vl~lk~~y~~i~L~~v~P 80 (181)
T 2nx2_A 35 RLIAFLDEGLEW-ILISGQL------GVELWAAEAAYDLQEEYPDLKVAVITP 80 (181)
T ss_dssp HHHHHHTTTCCE-EEECCCT------THHHHHHHHHHTTTTTCTTCEEEEEES
T ss_pred HHHHHHhCCCcE-EEECCCc------cHHHHHHHHHHHhccccCCceEEEEec
Confidence 344445678855 4555532 23 357888988888899999999998
No 364
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=27.96 E-value=3e+02 Score=23.99 Aligned_cols=108 Identities=6% Similarity=0.005 Sum_probs=56.9
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCC-CCC-cccHHHHHHHHHHHHHhCCCcEEEe--ecC---CCCCChHHHHHHHHc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRD-DLA-DQGSGHFAQTVRKLKELKPNMLIEA--LVP---DFRGNNGCVREVAKS 231 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~-dl~-d~G~~~~~~lir~Ik~~~p~i~Ie~--l~p---d~~g~~e~l~~L~~a 231 (375)
.+.+.+.++.+..+|.+.|++..|... +.. +...+.+++.++.+.+...++.+.+ ..+ .+..+.+.+..+.+.
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 167 (285)
T 1qtw_A 88 RDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 (285)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHh
Confidence 455667788888999999998766432 211 1223456666666654444555432 221 122245555555543
Q ss_pred --CcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHH
Q 017200 232 --GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 268 (375)
Q Consensus 232 --Gldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak 268 (375)
+.+.+...+++..-...... -.+++.+-++++.+.
T Consensus 168 v~~~~~~g~~~D~~H~~~~g~~--~~~~~~~~~~~~~~~ 204 (285)
T 1qtw_A 168 VEDKSRVGVCIDTCHAFAAGYD--LRTPAECEKTFADFA 204 (285)
T ss_dssp CSCGGGEEEEEEHHHHHHHTCC--CSSHHHHHHHHHHHH
T ss_pred hcCccceEEEEEhHhHHHcCCC--cCChHHHHHHHHHHH
Confidence 55566666777653322211 233444444554443
No 365
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=27.88 E-value=3.2e+02 Score=25.66 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecC----CCCCC-------hHHHHHHHHcC
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP----DFRGN-------NGCVREVAKSG 232 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~p----d~~g~-------~e~l~~L~~aG 232 (375)
+-+.++.+.|.+.|-|-+. +..+|...=..+++.+++.. ++.|.+++- ||.=+ .+.++.++++|
T Consensus 50 ~~a~~A~~gGAdRIELc~~----l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~G 124 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSG----LSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYG 124 (287)
T ss_dssp HHHHHHHHHTCSEEEECBC----GGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEECCC----CCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcC
Confidence 4456677889999998844 22233222245677776644 477776653 44323 34678888999
Q ss_pred cccccccc
Q 017200 233 LNVFAHNI 240 (375)
Q Consensus 233 ldv~~hnl 240 (375)
+|.+-.+.
T Consensus 125 AdGvVfG~ 132 (287)
T 3iwp_A 125 ADGLVFGA 132 (287)
T ss_dssp CSEEEECC
T ss_pred CCEEEEee
Confidence 99876663
No 366
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=27.74 E-value=2e+02 Score=21.87 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 101 (142)
T 2qxy_A 63 LNLIRRIREEFPDTKVAVLSAYV--DKDLIINSVKAGAVDY 101 (142)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHCCCCCEEEEECCC--CHHHHHHHHHCCccee
Confidence 57788888888888777676654 5666777778887644
No 367
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=27.71 E-value=1.3e+02 Score=28.70 Aligned_cols=130 Identities=11% Similarity=0.160 Sum_probs=74.0
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCC-------CcccHHHH-HHHHHHHHHhCCCcEEEeecCCCCCChHHHHH-HHH-cCc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDL-------ADQGSGHF-AQTVRKLKELKPNMLIEALVPDFRGNNGCVRE-VAK-SGL 233 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl-------~d~G~~~~-~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~-L~~-aGl 233 (375)
...+.+.++|++++-||=-....+ .++|...| .++|+++.+. ++.|.++.- +++.... +.- ..+
T Consensus 117 ~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~GLT~~G~~vV~eMnrl--GmivDlSH~----s~~t~~dvl~~s~~P 190 (318)
T 3neh_A 117 DKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNER--KVFTDVSHL----SVKAFWETLEQAEFV 190 (318)
T ss_dssp HHHHHHHHTTEEEEESCSSSBCSSBBBTTCTTCCCBCHHHHHHHHHHHHH--TCEEECTTB----CHHHHHHHHHHCSSE
T ss_pred HHHHHHHHcCCeEEEeeecCCCccccCCCCCCCCCCChhhHHHHHHHHHc--CCeEEcCCC----CHHHHHHHHHhcCCC
Confidence 566788899999999993211111 13454444 4577777665 678776553 2222222 222 245
Q ss_pred ccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C----CCHHHHHHHHHHHHHc-CCcEE
Q 017200 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G----ETPDQVVSTMEKVRAA-GVDVM 307 (375)
Q Consensus 234 dv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G----ET~ee~~etl~~Lrel-gvd~v 307 (375)
++.|. .+..+.+. +|..+ + +.|+.+++. .| .+..++.-.| . -|.++++++++.+.++ |+|.|
T Consensus 191 -iaSHS--naral~~h--~RNl~-D---~~l~ala~~--GG-vigv~~~~~fl~~~~~~tl~~~~~Hi~hi~~l~G~dhV 258 (318)
T 3neh_A 191 -IASHS--NAKAICSH--PRNLD-D---EQIKAMIEH--DA-MIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNI 258 (318)
T ss_dssp -EESSC--CBTTTSCC--TTSBC-H---HHHHHHHHT--TC-EEEECCCHHHHCTTSCCBHHHHHHHHHHHHHTTCGGGE
T ss_pred -ccccc--chhhcCCC--CCCCC-H---HHHHHHHHc--CC-EEEEEeeHHhhCCCCCCCHHHHHHHHHHHHHhcCCCeE
Confidence 77774 11122221 12222 2 445555553 34 3444444333 2 3689999999999987 68999
Q ss_pred eeec
Q 017200 308 TFGQ 311 (375)
Q Consensus 308 ~i~q 311 (375)
.||.
T Consensus 259 giGs 262 (318)
T 3neh_A 259 GFGS 262 (318)
T ss_dssp EECC
T ss_pred EECC
Confidence 9984
No 368
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=27.56 E-value=1.7e+02 Score=27.15 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=48.2
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHh-CCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
.|+.+|+.+.++...+.|.++|--..|-.. +|+. .+-++.+++. -+.+.|.+.-+-- +.+....+.++|.+
T Consensus 169 ~Lt~eei~~A~~ia~eaGADfVKTSTGf~~----~GAT--~edV~lm~~~vg~~v~VKaAGGIr--t~~~al~mi~aGA~ 240 (260)
T 3r12_A 169 YLDTEEKIAACVISKLAGAHFVKTSTGFGT----GGAT--AEDVHLMKWIVGDEMGVKASGGIR--TFEDAVKMIMYGAD 240 (260)
T ss_dssp GCCHHHHHHHHHHHHHTTCSEEECCCSSSS----CCCC--HHHHHHHHHHHCTTSEEEEESSCC--SHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHhCcCEEEcCCCCCC----CCCC--HHHHHHHHHHhCCCceEEEeCCCC--CHHHHHHHHHcCCc
Confidence 357889999999999999999986544221 2211 1223333332 3567787664422 67888889999999
Q ss_pred ccc
Q 017200 235 VFA 237 (375)
Q Consensus 235 v~~ 237 (375)
++.
T Consensus 241 RiG 243 (260)
T 3r12_A 241 RIG 243 (260)
T ss_dssp EEE
T ss_pred eee
Confidence 775
No 369
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=27.38 E-value=1.3e+02 Score=28.60 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=41.3
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
++++++.+.|++-|.|= ... .+.+.+.++.++ +.+.++++-+ . +.+.+..+.+.|+|.+..+
T Consensus 218 ~e~~eAl~aGaDiImLD-----n~s---~~~l~~av~~~~---~~v~leaSGG-I--t~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLD-----NMS---ISEIKKAVDIVN---GKSVLEVSGC-V--NIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHHTTCSEEEEE-----SCC---HHHHHHHHHHHT---TSSEEEEESS-C--CTTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEEC-----CCC---HHHHHHHHHhhc---CceEEEEECC-C--CHHHHHHHHHcCCCEEEeC
Confidence 55566667788877762 222 344556665553 4678886533 3 6788999999999988654
No 370
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=27.37 E-value=2.3e+02 Score=27.01 Aligned_cols=47 Identities=6% Similarity=-0.078 Sum_probs=33.2
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEE
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI 211 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~I 211 (375)
++++..+.|+.+.+.|++.|-|-.|. + ...-.+.|++|++..+++.+
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~-----~--~~~~~e~v~avr~a~gd~~l 193 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGR-----G--EKLDLEITAAVRGEIGDARL 193 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCS-----C--HHHHHHHHHHHHTTSTTCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCC-----C--HHHHHHHHHHHHHHcCCcEE
Confidence 57888888888888899888875542 1 34456778888877654444
No 371
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=26.96 E-value=1.9e+02 Score=21.24 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=24.3
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 101 (120)
T 1tmy_A 63 IDAIKEIMKIDPNAKIIVCSAMG--QQAMVIEAIKAGAKDF 101 (120)
T ss_dssp HHHHHHHHHHCTTCCEEEEECTT--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCCCCeEEEEeCCC--CHHHHHHHHHhCccee
Confidence 35677777766766665555443 4556666667776644
No 372
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=26.91 E-value=2.6e+02 Score=24.69 Aligned_cols=98 Identities=16% Similarity=0.228 Sum_probs=54.5
Q ss_pred CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcC
Q 017200 173 GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRD 252 (375)
Q Consensus 173 G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~ 252 (375)
+...++++|-+ .+.++.+++..|++.+..+.... ..+....+...|++.+...... +
T Consensus 139 ~~~~v~i~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~~~-------~-- 195 (247)
T 2otd_A 139 GMTPPLLSSFE------------IDALEAAQQAAPELPRGLLLDEW--RDDWRELTARLGCVSIHLNHKL-------L-- 195 (247)
T ss_dssp TSCCCEEEESC------------HHHHHHHHHHCTTSCEEEEESSC--CTTHHHHHHHHTCSEEEEEGGG-------C--
T ss_pred CcCCEEEEcCC------------HHHHHHHHHHCCCCCEEEEecCC--cccHHHHHHHcCCeEEecChHh-------C--
Confidence 44466676642 23566677777887776665432 1223344555666655432211 1
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 253 HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 253 r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+ -+.++.+|+ .|+.+.+.- . .+.+ .++.+.++|+|.|.- .|
T Consensus 196 ---~----~~~v~~~~~---~G~~v~~wT---v-n~~~----~~~~l~~~GvdgI~T-D~ 236 (247)
T 2otd_A 196 ---D----KARVMQLKD---AGLRILVYT---V-NKPQ----HAAELLRWGVDCICT-DA 236 (247)
T ss_dssp ---C----HHHHHHHHH---TTCEEEEEC---C-CCHH----HHHHHHHHTCSEEEE-SC
T ss_pred ---C----HHHHHHHHH---CCCEEEEEc---c-CCHH----HHHHHHHcCCCEEEe-CC
Confidence 1 256777777 577654432 1 3443 456677899998754 45
No 373
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.61 E-value=2.4e+02 Score=23.05 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVR 251 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr 251 (375)
.++++.|++..|.+.|-++++.- +.+......++|++-|=.---..+++...++
T Consensus 67 ~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~ 120 (184)
T 3rqi_A 67 LSLIAPLCDLQPDARILVLTGYA--SIATAVQAVKDGADNYLAKPANVESILAALQ 120 (184)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSC--CHHHHHHHHHHTCSEEEESSCCHHHHHHHTS
T ss_pred HHHHHHHHhcCCCCCEEEEeCCC--CHHHHHHHHHhCHHHheeCCCCHHHHHHHHH
Confidence 46778888888888887777654 6677788888898755221112345555555
No 374
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=26.57 E-value=3.4e+02 Score=24.04 Aligned_cols=140 Identities=9% Similarity=0.054 Sum_probs=72.4
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCC-CC-CcccHHHHHHHHHHHHHhC--CCcEE--EeecCCCCCChHHHHHH-HHc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRD-DL-ADQGSGHFAQTVRKLKELK--PNMLI--EALVPDFRGNNGCVREV-AKS 231 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~-dl-~d~G~~~~~~lir~Ik~~~--p~i~I--e~l~pd~~g~~e~l~~L-~~a 231 (375)
.+.+.+.++.++.+|++.|++.|+... +. .+...+.+++.++.+.+.. -++.+ |-....+..+.+.+..+ .+.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l~~~v 186 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYL 186 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHHHHHHhc
Confidence 355677788888999999998766431 11 1112344555555543321 13443 33322233344444444 444
Q ss_pred CcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEE-------eEEEecCCCHHHHHHHHHHHHHcCC
Q 017200 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT-------SIMLGCGETPDQVVSTMEKVRAAGV 304 (375)
Q Consensus 232 Gldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt-------~imvGlGET~ee~~etl~~Lrelgv 304 (375)
+.+.+...+++..- .. .+.+..+++ +........ +.++- +..+|-|+ -++.+.++.|++.|.
T Consensus 187 ~~~~vg~~~D~~h~----~~-~g~d~~~~l---~~~~~~i~~-vHl~D~~~g~~~~~p~G~G~--id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 187 NNPWFQLYPDIGNL----SA-WDNDVQMEL---QAGIGHIVA-VHVKDTKPGVFKNVPFGEGV--VDFERCFETLKQSGY 255 (295)
T ss_dssp CCTTEEEECBHHHH----HS-SSCCHHHHH---HHTGGGBCC-EEECEEETTEEEEECTTSSS--CCHHHHHHHHHHTTC
T ss_pred CCCCeEEEeccchH----hh-cCCCHHHHH---HHhccceEE-EEeecCCCCccCCcCCCCCc--cCHHHHHHHHHHCCC
Confidence 44445555555432 11 234444444 334443322 44432 23335554 467788888899998
Q ss_pred c-EEee
Q 017200 305 D-VMTF 309 (375)
Q Consensus 305 d-~v~i 309 (375)
+ .+.+
T Consensus 256 ~g~i~l 261 (295)
T 3cqj_A 256 CGPYLI 261 (295)
T ss_dssp CSCEEE
T ss_pred ceeEEE
Confidence 7 5555
No 375
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=26.22 E-value=4.3e+02 Score=25.13 Aligned_cols=50 Identities=6% Similarity=-0.066 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEE
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIE 212 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie 212 (375)
.++++..+.++.+.+.|++.+-|=.+.. + .+.-.+.|++|++.. |++.+.
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-~-----~~~~~e~v~avr~a~g~~~~l~ 214 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGA-P-----IEEDRMRIEAVLEEIGKDAQLA 214 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSS-C-----HHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCC-C-----HHHHHHHHHHHHHhcCCCCeEE
Confidence 4678899999999999999988765541 1 344578888988865 566554
No 376
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=26.17 E-value=2.2e+02 Score=21.71 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 103 (143)
T 3jte_A 65 MDILREIKKITPHMAVIILTGHG--DLDNAILAMKEGAFEY 103 (143)
T ss_dssp HHHHHHHHHHCTTCEEEEEECTT--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCC--CHHHHHHHHHhCccee
Confidence 46777888878888877777654 5677778888887654
No 377
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=26.12 E-value=3.7e+02 Score=24.36 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=66.0
Q ss_pred HHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc-cccchH
Q 017200 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH-NIETVE 244 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h-nlEtv~ 244 (375)
++.+...|++.|+|=.-|.. .+ .+...+.++.+........|++ +.. +...++.+.++|++.+-. .+|+.+
T Consensus 30 ~e~a~~~g~D~vilDlEhav--~~--~~k~~~~l~a~~~~~~~~~VRV--n~~--~~~di~~~ld~G~~gI~lP~v~sae 101 (261)
T 3qz6_A 30 VRIYAEAGLDYFIVDCEHAA--YT--FREINHLVSVAKNAGVSVLVRI--PQV--DRAHVQRLLDIGAEGFMIPGVQSAE 101 (261)
T ss_dssp HHHHHHTTCSEEEEESSSSC--CC--HHHHHHHHHHHHHHTCEEEEEC--SSC--CHHHHHHHHHHTCCEEEETTCCSHH
T ss_pred HHHHhcCCcCEEEEeccCCC--CC--HHHHHHHHHHHhhcCCeEEEEe--CCC--CHHHHHHHHhcCCCEEEECCcCCHH
Confidence 44556789999987433221 11 3445666666654322233333 222 456789999999985422 256654
Q ss_pred HH---HHHhcC-----CCC-----------CHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCc
Q 017200 245 EL---QSAVRD-----HRA-----------NFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVD 305 (375)
Q Consensus 245 rl---~~~mr~-----r~~-----------s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd 305 (375)
++ -+.++- |+. +..+|++ .+.+ . +...+| -||.+-+...=+.+.--++|
T Consensus 102 d~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~---~~~~---~---~~v~~m---IEt~~av~~~~eIaa~~~vd 169 (261)
T 3qz6_A 102 TMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQ---ERND---E---IFIMAQ---IEHVKAVEDIDSILAVQGVD 169 (261)
T ss_dssp HHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHH---HHHT---T---CEEEEE---ECCHHHHHTHHHHHTSTTCC
T ss_pred HHHHHHHHhccCCCCCcCcccchhhhccccchhhHHh---cCCC---C---eEEEEE---ECCHHHHHHHHHHhCCCCCC
Confidence 33 333320 110 1333332 2222 1 222333 49999887655544323799
Q ss_pred EEeeec
Q 017200 306 VMTFGQ 311 (375)
Q Consensus 306 ~v~i~q 311 (375)
.+.||.
T Consensus 170 ~l~iG~ 175 (261)
T 3qz6_A 170 AVIFGP 175 (261)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 999873
No 378
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.06 E-value=1.9e+02 Score=21.70 Aligned_cols=39 Identities=5% Similarity=0.081 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-++++.- +.+......++|++.|
T Consensus 67 ~~~~~~l~~~~~~~~ii~~t~~~--~~~~~~~~~~~g~~~~ 105 (130)
T 3eod_A 67 LKLLEHIRNRGDQTPVLVISATE--NMADIAKALRLGVEDV 105 (130)
T ss_dssp HHHHHHHHHTTCCCCEEEEECCC--CHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHhcCCCCCEEEEEcCC--CHHHHHHHHHcCCCEE
Confidence 46777788777777776666654 5666677778887654
No 379
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=25.50 E-value=1.3e+02 Score=28.27 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017200 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (375)
Q Consensus 195 ~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~G 274 (375)
+.+.++..++..|...|++... +.+.+++..++|+|++-. + .-+.++.-+.++.++. .
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv~----tl~ea~eAl~aGaD~I~L--D------------n~~~~~l~~av~~~~~---~- 242 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEVT----NLDELNQAIAAKADIVML--D------------NFSGEDIDIAVSIARG---K- 242 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES----SHHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHTT---T-
T ss_pred HHHHHHHHHhhCCCCcEEEEeC----CHHHHHHHHHcCCCEEEE--c------------CCCHHHHHHHHHhhcC---C-
Confidence 5567777887777777777554 457788888899998742 2 1223332333333322 1
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 275 l~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+.+-.+. |+ |. +.+..+.+.|+|++.+|-.
T Consensus 243 v~ieaSG--GI--t~----~~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 243 VALEVSG--NI--DR----NSIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp CEEEEES--SC--CT----TTHHHHHTTTCSEEECSHH
T ss_pred ceEEEEC--CC--CH----HHHHHHHHcCCCEEEEChh
Confidence 2221111 22 33 3445567899999999754
No 380
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=25.41 E-value=1.4e+02 Score=28.98 Aligned_cols=152 Identities=10% Similarity=0.078 Sum_probs=80.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeC-C----CCCc-ccHHHHHHHHHHHHHhC-CCcEEEeecCCCCC--Ch-H---
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDR-D----DLAD-QGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN-G--- 223 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr-~----dl~d-~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g--~~-e--- 223 (375)
.+++++.+.++++.+.|++.+-|--|.. . ..+. ...+.-.+.|++|++.. |++.|.+ |..+ +. +
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~v---Dan~~~~~~~A~~ 226 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLF---GTHGQFTVSGAKR 226 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEE---CCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEE---eCCCCcCHHHHHH
Confidence 4688999999999999999998843211 0 0000 01345577888888876 4555432 2221 22 2
Q ss_pred HHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC
Q 017200 224 CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG 303 (375)
Q Consensus 224 ~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelg 303 (375)
.++.|.+.|++.+ |- -+. ..+ ++.++.+++.. +++ | -.||+.....+..+.++.-.
T Consensus 227 ~~~~l~~~~i~~i----Ee------P~~--~~~----~~~~~~l~~~~--~iP----I--a~dE~~~~~~~~~~~i~~~a 282 (404)
T 4e5t_A 227 LARRLEAYDPLWF----EE------PIP--PEK----PEDMAEVARYT--SIP----V--ATGERLCTKYEFSRVLETGA 282 (404)
T ss_dssp HHHHHGGGCCSEE----EC------CSC--TTC----HHHHHHHHHHC--SSC----E--EECTTCCHHHHHHHHHHHTC
T ss_pred HHHHHhhcCCcEE----EC------CCC--ccc----HHHHHHHHhhC--CCC----E--EeCCCcCCHHHHHHHHHhCC
Confidence 3345555555443 21 011 123 33445555521 122 2 23566655555555666666
Q ss_pred CcEEeeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhh
Q 017200 304 VDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 304 vd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
+|++.+- + ..+-. ..+..++..+|...|....
T Consensus 283 ~d~v~~d----~----~~~GG---it~~~~ia~~A~~~gi~~~ 314 (404)
T 4e5t_A 283 ASILQMN----L----GRVGG---LLEAKKIAAMAECHSAQIA 314 (404)
T ss_dssp CSEECCC----T----TTSSC---HHHHHHHHHHHHHTTCEEC
T ss_pred CCEEecC----c----cccCC---HHHHHHHHHHHHHcCCEEe
Confidence 7776542 2 11111 3345666677777776543
No 381
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=25.34 E-value=1.9e+02 Score=25.77 Aligned_cols=59 Identities=7% Similarity=0.009 Sum_probs=40.9
Q ss_pred HHHHHhcCCcEEEEEeeeCCCCCcccHHHH--HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH-cCccccc
Q 017200 166 AEAIASWGLDYVVITSVDRDDLADQGSGHF--AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNVFA 237 (375)
Q Consensus 166 a~al~~~G~~eIvLTsgdr~dl~d~G~~~~--~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGldv~~ 237 (375)
+.++.+.|+++|-+ +| ...+ .+.++.|+...|++.+-. ++.. +.+.+..+.+ +|++.+.
T Consensus 132 ~~~A~~~Gad~vk~-------FP---a~~~~G~~~lk~i~~~~~~ipvva-iGGI--~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 132 IMMGYALGYRRFKL-------FP---AEISGGVAAIKAFGGPFGDIRFCP-TGGV--NPANVRNYMALPNVMCVG 193 (225)
T ss_dssp HHHHHTTTCCEEEE-------TT---HHHHTHHHHHHHHHTTTTTCEEEE-BSSC--CTTTHHHHHHSTTBCCEE
T ss_pred HHHHHHCCCCEEEE-------cc---CccccCHHHHHHHHhhCCCCeEEE-ECCC--CHHHHHHHHhccCCEEEE
Confidence 34456889999987 33 1222 577888988888777643 3333 5677888888 7999887
No 382
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=25.31 E-value=3e+02 Score=23.94 Aligned_cols=133 Identities=8% Similarity=0.028 Sum_probs=70.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCC-CChHHHHHHHHcCccccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-GNNGCVREVAKSGLNVFA 237 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~-g~~e~l~~L~~aGldv~~ 237 (375)
.+++.+.++.+..+|++.|++-.+. +.+.++.+..++..-.+.+|-....+. .+.+.+..+.+.+.+.+.
T Consensus 90 ~~~~~~~i~~A~~lGa~~v~~~~~~---------~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~~~~~~g 160 (262)
T 3p6l_A 90 SSDWEKMFKFAKAMDLEFITCEPAL---------SDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQSLG 160 (262)
T ss_dssp TTHHHHHHHHHHHTTCSEEEECCCG---------GGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTTSCTTEE
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCH---------HHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHhCCCceE
Confidence 4678888888999999999986431 223344444444321233343322221 255566666654444455
Q ss_pred ccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE----------EEecCCCHHHHHHHHHHHHHcCCc-E
Q 017200 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI----------MLGCGETPDQVVSTMEKVRAAGVD-V 306 (375)
Q Consensus 238 hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~i----------mvGlGET~ee~~etl~~Lrelgvd-~ 306 (375)
..+++..-. . -+.+..++++.+ ...... +.++-.- -+-+|+-.-++...++.|++.|.+ .
T Consensus 161 ~~~D~~h~~----~-~g~d~~~~l~~~---~~~i~~-vH~~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~l~~~gy~g~ 231 (262)
T 3p6l_A 161 SCSDVGHWR----R-EGLNQIDCLKQL---KGRIIS-LHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGV 231 (262)
T ss_dssp EEEEHHHHH----H-TTCCHHHHHHHT---TTCEEE-EEECEECCCCTTCSCCCEECTTSSSSCHHHHHHHHHHTTCCEE
T ss_pred EEechHHHH----h-cCCCHHHHHHHH---hhhheE-EeeccCCccccCcCccccCCCCCCccCHHHHHHHHHHCCCCeE
Confidence 555654422 2 234554444333 222111 2333221 122355555788888899999998 4
Q ss_pred Eee
Q 017200 307 MTF 309 (375)
Q Consensus 307 v~i 309 (375)
+.+
T Consensus 232 ~~~ 234 (262)
T 3p6l_A 232 FSI 234 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 383
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=25.30 E-value=2.7e+02 Score=26.13 Aligned_cols=88 Identities=14% Similarity=0.112 Sum_probs=53.1
Q ss_pred CcchHHHHHHHHHhcCCcEEEEE--eeeCCCC-----CcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH
Q 017200 158 DPDEPTNVAEAIASWGLDYVVIT--SVDRDDL-----ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLT--sgdr~dl-----~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (375)
++++..+.++...+.|.+.|-+. |+..... .....+.+.++++..++..-.+.+++. ..+.++...+
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~------~~~~i~~al~ 246 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY------TPAAIARAVR 246 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC------SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC------ChHHHHHHHH
Confidence 46788888888878888766554 3211111 011245677777777765433555544 3456778888
Q ss_pred cCcccccccccchHHHHHHhc
Q 017200 231 SGLNVFAHNIETVEELQSAVR 251 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr 251 (375)
+|.+.+.|..-..++..+.|.
T Consensus 247 ~G~~~i~H~~~~~~~~~~~~~ 267 (426)
T 2r8c_A 247 CGVRTIEHGNLIDDETARLVA 267 (426)
T ss_dssp TTCSEEEECTTCCHHHHHHHH
T ss_pred cCCCEEecCCcCCHHHHHHHH
Confidence 999999887544444444443
No 384
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=25.19 E-value=38 Score=30.55 Aligned_cols=61 Identities=20% Similarity=0.304 Sum_probs=38.7
Q ss_pred CcEEEEEeeeCCCCCccc-HHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 174 LDYVVITSVDRDDLADQG-SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 174 ~~eIvLTsgdr~dl~d~G-~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
+++|.+-+++. .....- .....+-|+.+++..+++.|++ .+.. +.+.+..+.++|+|++--
T Consensus 135 ~D~Vl~msv~p-Gf~Gq~f~~~~l~ki~~lr~~~~~~~I~V-dGGI--~~~t~~~~~~aGAd~~Vv 196 (228)
T 3ovp_A 135 IDMALVMTVEP-GFGGQKFMEDMMPKVHWLRTQFPSLDIEV-DGGV--GPDTVHKCAEAGANMIVS 196 (228)
T ss_dssp CSEEEEESSCT-TTCSCCCCGGGHHHHHHHHHHCTTCEEEE-ESSC--STTTHHHHHHHTCCEEEE
T ss_pred CCeEEEeeecC-CCCCcccCHHHHHHHHHHHHhcCCCCEEE-eCCc--CHHHHHHHHHcCCCEEEE
Confidence 78888877752 221100 1223556788888777666653 3333 578899999999998643
No 385
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=25.14 E-value=1.1e+02 Score=28.39 Aligned_cols=84 Identities=17% Similarity=0.202 Sum_probs=60.8
Q ss_pred ChHHHHHHHHcCcccccccccchHHHHHHhc-C--CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHH
Q 017200 221 NNGCVREVAKSGLNVFAHNIETVEELQSAVR-D--HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTME 297 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr-~--r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~ 297 (375)
|.-....+.++|.|.+-.+ ...+-.... | ...++++.+...+.+.+..+ +++-.++=.|+|.+.+++.++..
T Consensus 25 D~~sA~~~~~aG~~ai~vs---g~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~--~pviaD~d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 25 DVASARLLEAAGFTAIGTT---SAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA--IPVNADIEAGYGHAPEDVRRTVE 99 (275)
T ss_dssp SHHHHHHHHHHTCSCEEEC---HHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS--SCEEEECTTCSSSSHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEC---cHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC--CCEEeecCCCCCCCHHHHHHHHH
Confidence 4445566667787765432 111111111 1 24788999999999888754 57889999999999999999999
Q ss_pred HHHHcCCcEEee
Q 017200 298 KVRAAGVDVMTF 309 (375)
Q Consensus 298 ~Lrelgvd~v~i 309 (375)
.+.+.|+..|+|
T Consensus 100 ~l~~aGaagv~i 111 (275)
T 2ze3_A 100 HFAALGVAGVNL 111 (275)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCcEEEE
Confidence 999999999998
No 386
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=25.11 E-value=1.1e+02 Score=28.16 Aligned_cols=47 Identities=17% Similarity=0.165 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEee
Q 017200 255 ANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 255 ~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgvd~v~i 309 (375)
-+.+++.++++.+.+ +.-+|+|.| .+-+|.++..+...++|+|.+-+
T Consensus 47 Ls~~Er~~v~~~~~~--------rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 94 (283)
T 2pcq_A 47 LTPEERARGLRALRP--------RKPFLVGLMEETLPQAEGALLEAKAAGAMALLA 94 (283)
T ss_dssp SCHHHHHHHHHTCCC--------SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCHHHHHHHHHHHHh--------CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 456777777777654 334778884 57788888888888888886654
No 387
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=25.09 E-value=5.1e+02 Score=25.61 Aligned_cols=170 Identities=16% Similarity=0.188 Sum_probs=89.6
Q ss_pred cchHHHHHHHHHhcCCcEEEEEee--eCCCCCc-ccHHHHHHHHHHHHHh------------------------------
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSV--DRDDLAD-QGSGHFAQTVRKLKEL------------------------------ 205 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg--dr~dl~d-~G~~~~~~lir~Ik~~------------------------------ 205 (375)
+++....++.+.. ++++|.|--. +.+.+.+ ...+.+.++|+.+++.
T Consensus 196 ~~dy~~~a~~l~~-~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~ 274 (443)
T 1tv5_A 196 VDDLKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFN 274 (443)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHhc-CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhccc
Confidence 5666666666655 6888887543 2222221 1246677888888753
Q ss_pred ----------------------CCCcEEEeecCCCCCCh----HHHHHHHHcCcccc-ccc--ccchH-HHHHHhcCCCC
Q 017200 206 ----------------------KPNMLIEALVPDFRGNN----GCVREVAKSGLNVF-AHN--IETVE-ELQSAVRDHRA 255 (375)
Q Consensus 206 ----------------------~p~i~Ie~l~pd~~g~~----e~l~~L~~aGldv~-~hn--lEtv~-rl~~~mr~r~~ 255 (375)
.|-+.++ +.|++ +. +..+.+.++|+|.+ -|| ....+ +-+.... .++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~P~V~vK-ispd~--~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~-GGl 350 (443)
T 1tv5_A 275 KNNSHMMKDAKDNFLWFNTTKKKPLVFVK-LAPDL--NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKK-GGV 350 (443)
T ss_dssp -------------CCCCSSSSSCCEEEEE-ECSCC--CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCC-SEE
T ss_pred ccchhhhhhhhhcchhcccCCCCCeEEEE-eCCCC--CHHHHHHHHHHHHHcCCCEEEEECCCccccccccccccc-CCc
Confidence 1112333 56665 32 34677788999965 233 11100 0000000 111
Q ss_pred C----HHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHH
Q 017200 256 N----FKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAF 331 (375)
Q Consensus 256 s----~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~ 331 (375)
+ +...+++++.+++..+..+++ |-+|=-.|.+|..+.+. .|.|.|-++.-+ -.+-| .+..+-.
T Consensus 351 SG~~~~~~sl~~i~~v~~~v~~~iPV---Ig~GGI~s~~DA~e~l~----aGAd~Vqigral---l~~gP---~l~~~i~ 417 (443)
T 1tv5_A 351 SGAKLKDISTKFICEMYNYTNKQIPI---IASGGIFSGLDALEKIE----AGASVCQLYSCL---VFNGM---KSAVQIK 417 (443)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTTCSCE---EEESSCCSHHHHHHHHH----TTEEEEEESHHH---HHHGG---GHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHcCCCCcE---EEECCCCCHHHHHHHHH----cCCCEEEEcHHH---HhcCh---HHHHHHH
Confidence 1 445788899988865423432 22233479999888774 788888776221 00001 1122334
Q ss_pred HHHHHHHHHhhhhhh
Q 017200 332 ERYRALGMEMGFRYV 346 (375)
Q Consensus 332 ~~l~~~a~~~gf~~~ 346 (375)
+.+..+....||..+
T Consensus 418 ~~l~~~l~~~G~~si 432 (443)
T 1tv5_A 418 RELNHLLYQRGYYNL 432 (443)
T ss_dssp HHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHhCCCCH
Confidence 455666667787654
No 388
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=25.07 E-value=3.2e+02 Score=23.97 Aligned_cols=20 Identities=10% Similarity=0.091 Sum_probs=13.7
Q ss_pred HHHHHHHHHhcCCcEEEEEe
Q 017200 162 PTNVAEAIASWGLDYVVITS 181 (375)
Q Consensus 162 i~~~a~al~~~G~~eIvLTs 181 (375)
+.+.++.+++.|++.|-|.+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEH
T ss_pred HHHHHHHHHHhCCCEEEEcc
Confidence 44555666778888887754
No 389
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=25.01 E-value=78 Score=29.92 Aligned_cols=71 Identities=13% Similarity=0.266 Sum_probs=41.2
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHH-cCccccccc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNVFAHN 239 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGldv~~hn 239 (375)
++.+..+.+.++|++.|.-+|+ .+.-. .|.+.+.++++.- ...+.|-+-- .. +.+.+..+.+ +|++.|...
T Consensus 167 d~~~Ale~Li~lGvdrILTSG~-~~~a~-~Gl~~Lk~Lv~~a---~~rI~ImaGG-GV--~~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 167 DPMAALETLLTLGFERVLTSGC-DSSAL-EGLPLIKRLIEQA---KGRIVVMPGG-GI--TDRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp CHHHHHHHHHHHTCSEEEECTT-SSSTT-TTHHHHHHHHHHH---TTSSEEEECT-TC--CTTTHHHHHHHHCCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEECCCC-CCChH-HhHHHHHHHHHHh---CCCCEEEECC-Cc--CHHHHHHHHHhhCCCEEeEC
Confidence 3667778888899998865555 33333 3555555554432 2334443221 12 4556777665 899887654
No 390
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=24.85 E-value=87 Score=31.94 Aligned_cols=62 Identities=15% Similarity=0.346 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeeecCCC-CCCCCCCcc-------ccCCHHHHHHHHHHHHHhhhhhhc
Q 017200 286 GETPDQVVSTMEKVRAAGVDVMTFGQYMR-PSKRHMPVS-------EYITPEAFERYRALGMEMGFRYVA 347 (375)
Q Consensus 286 GET~ee~~etl~~Lrelgvd~v~i~qYl~-P~~~~~~v~-------~~v~pe~~~~l~~~a~~~gf~~~~ 347 (375)
|-+...+.+.|..|+++|++.|-|.+.+. |...+-.+. ++=+++.|+.|-+-+.++|...++
T Consensus 168 ~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 168 GGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEE
T ss_pred CcCHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 55899999999999999999887765442 222222222 234678999999999999987653
No 391
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=24.82 E-value=2.3e+02 Score=21.96 Aligned_cols=39 Identities=8% Similarity=0.131 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 105 (153)
T 3cz5_A 67 IEATRHIRQWDGAARILIFTMHQ--GSAFALKAFEAGASGY 105 (153)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCC--SHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCC--CHHHHHHHHHCCCcEE
Confidence 46788888877877776666543 5677777888888754
No 392
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=24.81 E-value=3.7e+02 Score=23.90 Aligned_cols=165 Identities=14% Similarity=0.137 Sum_probs=95.3
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCC--C----hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--N----NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g--~----~e~l~~L~~ 230 (375)
.+.+++.+.++++.+.|+.-|++.-+ ++...+...+. .++.|...++.-.| . ....+...+
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~p~------------~v~~~~~~l~~-~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIPPS------------YVAWVRARYPH-APFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCGG------------GHHHHHHHCTT-CSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHH------------HHHHHHHHhCC-CCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 46789999999999999999986522 22222221111 24777766532222 1 123455556
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|.|-+..-+ + +..+. ..+|+..++-+..+++..+. ..++.=+-.++ =|++++....+...++|.|+|.-.
T Consensus 83 ~GAdevd~vi---n--ig~~~--~g~~~~v~~ei~~v~~a~~~-~~lkvIlet~~-l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 83 RGADEVDMVL---H--LGRAK--AGDLDYLEAEVRAVREAVPQ-AVLKVILETGY-FSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp TTCSEEEEEC---C--HHHHH--TTCHHHHHHHHHHHHHHSTT-SEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred cCCCEEEecc---c--chhhh--CCCHHHHHHHHHHHHHHHcC-CCceEEEecCC-CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 6777553321 1 11122 24678888888888887643 33343222222 278999999999999999999874
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccchhhh
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVR 353 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vr 353 (375)
.=+.|. -.+++.++.+++.. .-.....+|| -+|
T Consensus 154 TGf~~~--------gat~~dv~~m~~~v-g~~v~VkaaG-Gir 186 (220)
T 1ub3_A 154 TGFGPR--------GASLEDVALLVRVA-QGRAQVKAAG-GIR 186 (220)
T ss_dssp CSSSSC--------CCCHHHHHHHHHHH-TTSSEEEEES-SCC
T ss_pred CCCCCC--------CCCHHHHHHHHHhh-CCCCeEEEEC-CCC
Confidence 212221 12456666666543 2223444666 556
No 393
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=24.74 E-value=68 Score=28.74 Aligned_cols=141 Identities=10% Similarity=0.080 Sum_probs=71.3
Q ss_pred chHHHHHHHHHhcCCcEEEEEeeeCC---CCCc--ccHHHHHHHHHHHHHhC--CCc--EEEeec---CCCCCChH-HHH
Q 017200 160 DEPTNVAEAIASWGLDYVVITSVDRD---DLAD--QGSGHFAQTVRKLKELK--PNM--LIEALV---PDFRGNNG-CVR 226 (375)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsgdr~---dl~d--~G~~~~~~lir~Ik~~~--p~i--~Ie~l~---pd~~g~~e-~l~ 226 (375)
+.+.+.++.+..+|++.|++.+|... ..++ ...+.+.+.++.+.+.. -++ .+|-.. ..+..+.+ .++
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ 183 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAAS 183 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHH
Confidence 56667788888999999998766321 1111 12344555555543221 134 334232 12233444 444
Q ss_pred HHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe---EEEecCCCHHHHHHHHHHHHHcC
Q 017200 227 EVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS---IMLGCGETPDQVVSTMEKVRAAG 303 (375)
Q Consensus 227 ~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~---imvGlGET~ee~~etl~~Lrelg 303 (375)
.+.+.+.+.+...+++..-... +.+..++++.+ ...... +.++-. ...|-|+..-++.+.++.|++.|
T Consensus 184 ll~~v~~~~vg~~~D~~h~~~~-----g~d~~~~l~~~---~~~i~~-vHlkD~~~r~~pG~G~d~id~~~i~~~L~~~g 254 (287)
T 3kws_A 184 LCRDINNPGVRCMGDFWHMTWE-----ETSDMGAFISG---GEYLQH-VHVASRKRRSMPGEDGDADNYINGFKGLKMIG 254 (287)
T ss_dssp HHHHHCCTTEEEEEEHHHHHHH-----CSCHHHHHHHH---GGGEEE-EEECCTTTSCSTTTTGGGCCCHHHHHHHHHTT
T ss_pred HHHHcCCCCeeEEeehHHHHhc-----CCCHHHHHHHh---hhhEEE-EEeCCCCCCCCCCCCCCCcCHHHHHHHHHHcC
Confidence 4555555556666666543221 34454444433 332211 333332 22344541156777888888998
Q ss_pred Cc-EEee
Q 017200 304 VD-VMTF 309 (375)
Q Consensus 304 vd-~v~i 309 (375)
.+ .+.+
T Consensus 255 y~g~i~l 261 (287)
T 3kws_A 255 YNNYVSF 261 (287)
T ss_dssp CCSEEEE
T ss_pred CCccEEE
Confidence 87 4555
No 394
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=24.65 E-value=2.6e+02 Score=25.99 Aligned_cols=88 Identities=8% Similarity=0.062 Sum_probs=53.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEe--eeCCCC-----CcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITS--VDRDDL-----ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA 229 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTs--gdr~dl-----~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~ 229 (375)
-++++..+.++...+.|.+.|.+.. +..... .....+.+..+++..++..-.+.+++. ..+.++...
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~------~~~~i~~~l 242 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY------TGRAIARAV 242 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE------EHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC------ChHHHHHHH
Confidence 3467888888888888887665543 211111 011245677777777765433556654 235577777
Q ss_pred HcCcccccccccchHHHHHHh
Q 017200 230 KSGLNVFAHNIETVEELQSAV 250 (375)
Q Consensus 230 ~aGldv~~hnlEtv~rl~~~m 250 (375)
++|.+.+.|..-..++..+.|
T Consensus 243 ~~g~~~i~H~~~~~~~~~~~l 263 (423)
T 3feq_A 243 RCGVRTIEHGNLVDEAAAKLM 263 (423)
T ss_dssp HHTCCEEEEEEECCHHHHHHH
T ss_pred HcCCCEEeccCcCCHHHHHHH
Confidence 889999998754444443333
No 395
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=24.54 E-value=3.6e+02 Score=24.66 Aligned_cols=74 Identities=12% Similarity=0.157 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCc--------------------ccHHHHHHHHHHHHHhCC-CcEEEe-ecCCC
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLAD--------------------QGSGHFAQTVRKLKELKP-NMLIEA-LVPDF 218 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d--------------------~G~~~~~~lir~Ik~~~p-~i~Ie~-l~pd~ 218 (375)
.+.+.++++.+.|+++|++|-=. ..+. .....|.+.|+.+++++. ++.|-. +.-++
T Consensus 19 ~~~e~~~~A~~~G~~~i~~TdH~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~~y~~~I~Il~GiE~d~ 96 (283)
T 3dcp_A 19 DVEEMVLKAIELDFDEYSIVEHA--PLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDY 96 (283)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEC--CCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHHHTTTTCEEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEecCC--CCcchhhhcccccccccccccchHHHHHHHHHHHHHHHHHccCCCeEEEEEEecc
Confidence 34566777789999999999532 1110 113567788888888874 455432 11122
Q ss_pred -CCChHHHHHHHHc---Ccccc
Q 017200 219 -RGNNGCVREVAKS---GLNVF 236 (375)
Q Consensus 219 -~g~~e~l~~L~~a---Gldv~ 236 (375)
.+..+..+.+.+. .+|.+
T Consensus 97 ~~g~~d~~~~~l~~~~~~~D~v 118 (283)
T 3dcp_A 97 LIGYEDFTRDFLNEYGPQTDDG 118 (283)
T ss_dssp CTTCHHHHHHHHHHHGGGCSEE
T ss_pred cCCcHHHHHHHHHhcCCCCCEE
Confidence 2355666666554 36755
No 396
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=24.49 E-value=1.6e+02 Score=28.56 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=49.2
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv 235 (375)
.+.++....++++.+.|+++|.++++..+. +. .. .+ ++.|++... +.|- ..+.+ +.+..+.+.+.| +|.
T Consensus 263 ~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-~~--~~--~~-~~~ir~~~~-iPvi-~~G~i--t~~~a~~~l~~g~aD~ 332 (379)
T 3aty_A 263 NPEALTKHLCKKIEPLSLAYLHYLRGDMVN-QQ--IG--DV-VAWVRGSYS-GVKI-SNLRY--DFEEADQQIREGKVDA 332 (379)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECSCTTS-CC--CC--CH-HHHHHTTCC-SCEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-CC--cc--HH-HHHHHHHCC-CcEE-EECCC--CHHHHHHHHHcCCCeE
Confidence 456788899999999999999999864211 11 11 15 777877653 3222 33455 677788888777 888
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 333 V~ig 336 (379)
T 3aty_A 333 VAFG 336 (379)
T ss_dssp EEES
T ss_pred EEec
Confidence 7765
No 397
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=24.18 E-value=4e+02 Score=24.05 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=98.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
.+.+++.+.++++.+.|+.-|++... +....+.++ ..++.|...++.-.|. ....+...+
T Consensus 26 ~t~~~i~~lc~eA~~~~~~aVcV~p~------------~v~~a~~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~ 91 (231)
T 3ndo_A 26 ATPSDVTALVDEAADLGVFAVCVSPP------------LVSVAAGVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVA 91 (231)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECHH------------HHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 56788999999999999999987421 233333332 2357787766432332 223444556
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC---CCHHHHHHHHHHHHHcCCcEE
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG---ETPDQVVSTMEKVRAAGVDVM 307 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG---ET~ee~~etl~~Lrelgvd~v 307 (375)
.|.|-+..-+ + + ..+. ..+|+..++-++.+++..+ |..+|.=|=.|+- -|++++....+...++|.|+|
T Consensus 92 ~GAdEIDmVi---n-i-g~lk--~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfV 163 (231)
T 3ndo_A 92 AGATEIDMVI---D-V-GAAL--AGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFV 163 (231)
T ss_dssp TTCSEEEEEC---C-H-HHHH--TTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEE
T ss_pred cCCCEEEEEe---e-h-Hhhh--cccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEE
Confidence 6766543211 1 1 1232 3578888888888888765 4544432222322 289999999999999999999
Q ss_pred eeecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccchhhhhh
Q 017200 308 TFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (375)
Q Consensus 308 ~i~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (375)
.-..=+.|. .+ .+++..+.+++... -.....+|| -+|+-
T Consensus 164 KTSTGf~~~-~g------At~edv~lm~~~v~-~~v~VKaaG-GIrt~ 202 (231)
T 3ndo_A 164 KTSTGFHPS-GG------ASVQAVEIMARTVG-ERLGVKASG-GIRTA 202 (231)
T ss_dssp ECCCSCCTT-CS------CCHHHHHHHHHHHT-TTSEEEEES-SCCSH
T ss_pred EcCCCCCCC-CC------CCHHHHHHHHHHhC-CCceEEEeC-CCCCH
Confidence 774312210 11 24555666665532 123344777 57753
No 398
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=24.17 E-value=1e+02 Score=27.28 Aligned_cols=72 Identities=17% Similarity=0.296 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc-----C-cc
Q 017200 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-----G-LN 234 (375)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a-----G-ld 234 (375)
...+.++.+.+.|+.+|.+|+..++... .|.+ .++++.+++.. ++.|-+. +... +.+.+..+++. | +|
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~-~g~~--~~~i~~l~~~~-~iPvia~-GGI~-~~~d~~~~~~~~~~~~G~ad 218 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTL-QEHD--FSLTKKIAIEA-EVKVLAA-GGIS-SENSLKTAQKVHTETNGLLK 218 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHT-CCCC--HHHHHHHHHHH-TCEEEEE-SSCC-SHHHHHHHHHHHHHTTTSEE
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccC-CcCC--HHHHHHHHHhc-CCcEEEE-CCCC-CHHHHHHHHhcccccCCeEe
Confidence 4556677777899999999986532111 1111 45666666543 3444332 2332 67889999887 8 88
Q ss_pred cccc
Q 017200 235 VFAH 238 (375)
Q Consensus 235 v~~h 238 (375)
.+-.
T Consensus 219 gv~v 222 (241)
T 1qo2_A 219 GVIV 222 (241)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6544
No 399
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=24.10 E-value=4.4e+02 Score=24.51 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCceEEEeEEEe-cCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 255 ANFKQSLDVLMMAKDYVPAGTLTKTSIMLG-CGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 255 ~s~~~~l~vl~~ak~~~p~Gl~tkt~imvG-lGET~ee~~etl~~Lrelgvd~v~i 309 (375)
.+.++.+...+.+.+..+. ..+-.++=+| + .+.++.+++...+-+.|++.|.+
T Consensus 72 vtldem~~h~~aV~r~~~~-~~vvaD~pfgsY-~s~~~a~~~a~rl~kaGa~aVkl 125 (275)
T 3vav_A 72 VTLDDIAYHTACVARAQPR-ALIVADLPFGTY-GTPADAFASAVKLMRAGAQMVKF 125 (275)
T ss_dssp CCHHHHHHHHHHHHHTCCS-SEEEEECCTTSC-SSHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHhcCCC-CCEEEecCCCCC-CCHHHHHHHHHHHHHcCCCEEEE
Confidence 4456666656655554332 3455555553 5 56666666655555556666555
No 400
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=23.67 E-value=4.5e+02 Score=24.45 Aligned_cols=139 Identities=16% Similarity=0.128 Sum_probs=68.6
Q ss_pred CCCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHh-CCCcEEEeecCCCCCChHHHHHHHHcCcc
Q 017200 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (375)
Q Consensus 156 ~ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (375)
+++.+|++..++++.+ |.+.+.++ +|-|...-++.+...+.+.++-+. .-.+.||--. . ..+.++.|.++|+.
T Consensus 71 ~vtldem~~h~~aV~r-~~~~~~vv-aD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~--~--~~~~i~~l~~~GIp 144 (275)
T 3vav_A 71 PVTLDDIAYHTACVAR-AQPRALIV-ADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGE--W--LAETVRFLVERAVP 144 (275)
T ss_dssp TCCHHHHHHHHHHHHH-TCCSSEEE-EECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCG--G--GHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHHh-cCCCCCEE-EecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCch--h--HHHHHHHHHHCCCC
Confidence 4778888888887765 45433322 443321112344445554444332 1224454321 1 35778888888888
Q ss_pred ccccc-c--cchHHH--HHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 235 VFAHN-I--ETVEEL--QSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 235 v~~hn-l--Etv~rl--~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
++.|- + ..++.+ |+ +. +.+-+..-+++++++.+...| +.+|+==+=..+ ....+ -+++.+-.|.|
T Consensus 145 v~gHlgltPq~~~~~gg~~-vq--grt~~~a~~~i~rA~a~~eAG----A~~ivlE~vp~~-~a~~I--t~~l~iP~igI 214 (275)
T 3vav_A 145 VCAHVGLTPQSVHAFGGFK-VQ--GKTEAGAAQLLRDARAVEEAG----AQLIVLEAVPTL-VAAEV--TRELSIPTIGI 214 (275)
T ss_dssp EEEEEESCGGGHHHHC----CC--CCSHHHHHHHHHHHHHHHHHT----CSEEEEESCCHH-HHHHH--HHHCSSCEEEE
T ss_pred EEEecCCCceEEeccCCeE-EE--cCCHHHHHHHHHHHHHHHHcC----CCEEEecCCCHH-HHHHH--HHhCCCCEEEE
Confidence 88873 1 112211 22 12 234455567777777753233 444443244444 33322 33455545555
Q ss_pred e
Q 017200 310 G 310 (375)
Q Consensus 310 ~ 310 (375)
|
T Consensus 215 G 215 (275)
T 3vav_A 215 G 215 (275)
T ss_dssp S
T ss_pred c
Confidence 4
No 401
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=23.62 E-value=1.6e+02 Score=28.60 Aligned_cols=136 Identities=12% Similarity=0.073 Sum_probs=75.0
Q ss_pred CCCCcchHH-H-------HHHHHH-hcCCcEEEEEeee--------------C-CCCCccc------HHHHHHHHHHHHH
Q 017200 155 PPPDPDEPT-N-------VAEAIA-SWGLDYVVITSVD--------------R-DDLADQG------SGHFAQTVRKLKE 204 (375)
Q Consensus 155 ~~ld~eEi~-~-------~a~al~-~~G~~eIvLTsgd--------------r-~dl~d~G------~~~~~~lir~Ik~ 204 (375)
..|+.+||. + .|+.+. +.|++-|-|-+++ | .|- .+| .....++|++|++
T Consensus 161 r~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~-yGG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 161 EELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGP-YAGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp EECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSST-TCTTSHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCC-CCccChhhhHHHHHHHHHHHHH
Confidence 348888888 4 445566 8899999998874 2 221 123 2457889999987
Q ss_pred hCC-C-cEEEeecCCC-----CCC-----hHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCC
Q 017200 205 LKP-N-MLIEALVPDF-----RGN-----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 272 (375)
Q Consensus 205 ~~p-~-i~Ie~l~pd~-----~g~-----~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p 272 (375)
..+ + +.|++..-++ .+. .+.++.|.++|+|.+....-+.+ +.... .+ ++.+++..+
T Consensus 240 avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-------~~~~~----~~-~~~ir~~~~ 307 (379)
T 3aty_A 240 AVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV-------NQQIG----DV-VAWVRGSYS 307 (379)
T ss_dssp HHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT-------SCCCC----CH-HHHHHTTCC
T ss_pred hcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC-------CCCcc----HH-HHHHHHHCC
Confidence 654 2 4454332221 111 34567777889887654211111 01111 14 666666431
Q ss_pred CCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 273 AGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 273 ~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+ -+|.+=|=|.++..+. |++-++|.|.++..
T Consensus 308 --i----Pvi~~G~it~~~a~~~---l~~g~aD~V~igR~ 338 (379)
T 3aty_A 308 --G----VKISNLRYDFEEADQQ---IREGKVDAVAFGAK 338 (379)
T ss_dssp --S----CEEEESSCCHHHHHHH---HHTTSCSEEEESHH
T ss_pred --C----cEEEECCCCHHHHHHH---HHcCCCeEEEecHH
Confidence 2 2333223366665444 34455999999843
No 402
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.61 E-value=2.5e+02 Score=21.47 Aligned_cols=39 Identities=5% Similarity=-0.008 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 64 ~~l~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~ 102 (137)
T 3cfy_A 64 EDVLDWINQNDIPTSVIIATAHG--SVDLAVNLIQKGAEDF 102 (137)
T ss_dssp HHHHHHHHHTTCCCEEEEEESSC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCCEEEEEecC--cHHHHHHHHHCCccEE
Confidence 46777888777777776666543 5666777778887644
No 403
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.58 E-value=2.6e+02 Score=21.71 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 101 (155)
T 1qkk_A 63 LALFRKILALDPDLPMILVTGHG--DIPMAVQAIQDGAYDF 101 (155)
T ss_dssp HHHHHHHHHHCTTSCEEEEECGG--GHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCC--ChHHHHHHHhcCCCeE
Confidence 46777787777777776666543 4566677777887654
No 404
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=23.48 E-value=3.1e+02 Score=27.40 Aligned_cols=129 Identities=18% Similarity=0.276 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc-C-ccccccccc-c-hHHHHHH------------hcCCCCC
Q 017200 193 GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-G-LNVFAHNIE-T-VEELQSA------------VRDHRAN 256 (375)
Q Consensus 193 ~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a-G-ldv~~hnlE-t-v~rl~~~------------mr~r~~s 256 (375)
+.++++.+.+.+.+|-+.||= |--..+.+.+..|.+. | +.++.--+- | ..++.+- +. +-.+
T Consensus 282 ~elid~y~~lle~ypI~~IED--Pl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvn-qiGG 358 (441)
T 3qtp_A 282 DGLIAEYVDYGKHYPIASIED--PFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVN-QIGT 358 (441)
T ss_dssp HHHHHHHHHHHHHSCEEEEES--CSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGG-GTCC
T ss_pred HHHHHHHHHHhhhcceeeecC--CCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEeccc-cccc
Confidence 556666666656677444442 2111256667777654 3 222221111 1 1132222 22 3467
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEeeecCCCCCCCCCCccccCCHHHHHHH
Q 017200 257 FKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERY 334 (375)
Q Consensus 257 ~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~ee~~etl~~Lrelgvd~v~i~qYl~P~~~~~~v~~~v~pe~~~~l 334 (375)
..+++++++.|+. .|+ .+|+|+ |||++.++..|. -.++..++..| -|.. .+ .-.++++|
T Consensus 359 ITEalkaa~lA~~---~G~----~vmvsHrsgETeDt~iAdLA--Val~~gqIKtG---ap~r-----se--R~aKyNqL 419 (441)
T 3qtp_A 359 LTETFKTIKMAQE---KGW----GVMASHRSGETEDTFIADLV--VGLNCKQIKTG---APCR-----SE--RLCKYNQL 419 (441)
T ss_dssp HHHHHHHHHHHHH---TTC----EEEEECCSSCCSCCHHHHHH--HHTTCEEEECC---CSCS-----HH--HHHHHHHH
T ss_pred HHHHHHHHHHHHH---cCC----eEEEeCCCCCccHhHHHHHH--HHhCCCccccC---CCcc-----hh--HHHHHHHH
Confidence 8999999999999 564 468888 999998876553 34555566555 1211 01 12356778
Q ss_pred HHHHHHhhh
Q 017200 335 RALGMEMGF 343 (375)
Q Consensus 335 ~~~a~~~gf 343 (375)
..+..++|-
T Consensus 420 lrIeeelg~ 428 (441)
T 3qtp_A 420 MRIEEELGN 428 (441)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhCc
Confidence 888888875
No 405
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=23.37 E-value=3.2e+02 Score=22.66 Aligned_cols=58 Identities=19% Similarity=0.133 Sum_probs=39.4
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~ 269 (375)
.++++.|++..|.+.|-+++..- +.+.+....++|++.| +. +..+.++.++.++.+.+
T Consensus 67 ~~~~~~lr~~~~~~~ii~ls~~~--~~~~~~~~~~~Ga~~~-------------l~-Kp~~~~~L~~~i~~~~~ 124 (215)
T 1a04_A 67 LETLDKLREKSLSGRIVVFSVSN--HEEDVVTALKRGADGY-------------LL-KDMEPEDLLKALHQAAA 124 (215)
T ss_dssp HHHHHHHHHSCCCSEEEEEECCC--CHHHHHHHHHTTCSEE-------------EE-TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEECCC--CHHHHHHHHHcCCcEE-------------Ee-CCCCHHHHHHHHHHHHc
Confidence 46778888877877776666543 5666777778887654 22 34667777777777766
No 406
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=23.36 E-value=4e+02 Score=23.74 Aligned_cols=126 Identities=12% Similarity=0.210 Sum_probs=71.1
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHHhCCCcE--EEeecCCCCCChHHHHHHHHcC
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKPNML--IEALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d--~G~~~~~~lir~Ik~~~p~i~--Ie~l~pd~~g~~e~l~~L~~aG 232 (375)
.|.-.+.+.++.+.+.|++++++=--|..-.|. .| ...++.|++..|+.. +++.+-|- ...++.+.+
T Consensus 15 ~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G----~~~v~~lr~~~p~~~~dvhLmv~dp---~~~i~~~~~-- 85 (227)
T 1tqx_A 15 SNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFG----PPVINNLKKYTKSIFFDVHLMVEYP---EKYVPLLKT-- 85 (227)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCC----HHHHHHHGGGCSSCEEEEEEESSCG---GGGGGGCTT--
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcC----HHHHHHHHHhCCCCcEEEEEEEcCH---HHHHHHHHh--
Confidence 677888888999989999987765545332222 23 478899998876543 34444331 123444544
Q ss_pred cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC-CcEEeee
Q 017200 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG-VDVMTFG 310 (375)
Q Consensus 233 ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelg-vd~v~i~ 310 (375)
.|.+....|+.+. +..+.++..+.+++ .|+ +.++-+. -.|..+ .++.+.+++ +|.|.+.
T Consensus 86 Ad~itvH~ea~~~----------~~~~~i~~~~~i~~---~G~--k~gvaln-p~tp~~---~~~~~l~~g~~D~Vlvm 145 (227)
T 1tqx_A 86 SNQLTFHFEALNE----------DTERCIQLAKEIRD---NNL--WCGISIK-PKTDVQ---KLVPILDTNLINTVLVM 145 (227)
T ss_dssp SSEEEEEGGGGTT----------CHHHHHHHHHHHHT---TTC--EEEEEEC-TTSCGG---GGHHHHTTTCCSEEEEE
T ss_pred CCEEEEeecCCcc----------CHHHHHHHHHHHHH---cCC--eEEEEeC-CCCcHH---HHHHHhhcCCcCEEEEe
Confidence 6777766665421 12222222226666 464 4555442 235533 344445564 8888553
No 407
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=23.26 E-value=1.5e+02 Score=27.05 Aligned_cols=52 Identities=19% Similarity=0.234 Sum_probs=37.3
Q ss_pred CCCcchHHH----HHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEee
Q 017200 156 PPDPDEPTN----VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEAL 214 (375)
Q Consensus 156 ~ld~eEi~~----~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l 214 (375)
.++++.... +++.+.+.|++.++|..++.... +...++.+...+|++.+-.+
T Consensus 89 sl~~~tl~~~l~di~~sl~~~G~rrlvivNgHGGN~-------l~~a~~~l~~~~~~~~v~~~ 144 (254)
T 3lub_A 89 HTRYATQQAILEDIVSSLHVQGFRKLLILSGHGGNN-------FKGMIRDLAFEYPDFLIAAA 144 (254)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCTTCC-------CHHHHHHHHHHCTTCEEEEE
T ss_pred EeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCchHH-------HHHHHHHHHHHCCCcEEEEe
Confidence 466666544 56677889999999999876432 45677888888877776543
No 408
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=23.16 E-value=3.9e+02 Score=24.72 Aligned_cols=146 Identities=8% Similarity=0.046 Sum_probs=72.8
Q ss_pred HHHHHHhcCCcEEEEEeeeCCCCCc-----ccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 165 VAEAIASWGLDYVVITSVDRDDLAD-----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 165 ~a~al~~~G~~eIvLTsgdr~dl~d-----~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.+++..+.|++-|.+---...-+.. ....++.++++.|++. |++.+-... .|+...+..+.+.|+|+++..
T Consensus 184 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~---~g~~~~l~~l~~~g~d~~~~d 259 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFF---RGSSSFIDLAVDYRADALSVD 259 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEE---SSHHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEc---CCcHHHHHHHHHcCCCEEEeC
Confidence 4455567899865443110011111 1234566777788776 443322222 124568899999999988652
Q ss_pred ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEeeecCCCCCCC
Q 017200 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFGQYMRPSKR 318 (375)
Q Consensus 240 lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrel-gvd~v~i~qYl~P~~~ 318 (375)
- + .+.++..+.+ +..+-.|+.. .++ -.|.|++.+..+.+-+. +...=.| +.|+
T Consensus 260 ~-~------------~dl~~~~~~~---~~~l~Gn~dp--~~l---~gt~e~i~~~v~~~l~~~g~~~g~I---~~~g-- 313 (338)
T 2eja_A 260 W-S------------VDIPELFKIY---DKGFQGNLEP--AVL---YASEEVIEEKTLGLLRRIPVKTRYV---FNLG-- 313 (338)
T ss_dssp T-T------------SCHHHHHHHC---CSEEECCBCG--GGG---GSCHHHHHHHHHHHHTTCCCSSSEE---BCBS--
T ss_pred C-C------------CCHHHHHHhC---CeEEEECCCH--HHh---cCCHHHHHHHHHHHHHHhCCCCCeE---EeCC--
Confidence 1 1 1122111111 1111123332 333 24899998888777654 5421011 2232
Q ss_pred CCCccccCCHHHHHHHHHHHHHh
Q 017200 319 HMPVSEYITPEAFERYRALGMEM 341 (375)
Q Consensus 319 ~~~v~~~v~pe~~~~l~~~a~~~ 341 (375)
.-+...+.++....+-+.+.+.
T Consensus 314 -~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 314 -HGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp -SCCCTTSCHHHHHHHHHHHHTC
T ss_pred -CCCCCCCCHHHHHHHHHHHHHh
Confidence 1233356688888887776653
No 409
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=23.15 E-value=4.5e+02 Score=26.04 Aligned_cols=69 Identities=17% Similarity=0.203 Sum_probs=45.2
Q ss_pred ChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHH
Q 017200 221 NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVR 300 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lr 300 (375)
..+.++.+.++|+|.+..+.- .++ .+..+++++.+++..|. +++-. |--.|.++ .+.+.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~-----------~G~-~~~~~~~i~~i~~~~~~-~pvi~----~~v~t~~~----a~~l~ 314 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSS-----------QGN-SVYQIAMVHYIKQKYPH-LQVIG----GNVVTAAQ----AKNLI 314 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCS-----------CCC-SHHHHHHHHHHHHHCTT-CEEEE----EEECSHHH----HHHHH
T ss_pred hHHHHHHHHHcCCCEEEeecc-----------CCc-chhHHHHHHHHHHhCCC-CceEe----cccchHHH----HHHHH
Confidence 367788899999998765321 011 24567899999997653 54422 21245544 66777
Q ss_pred HcCCcEEeee
Q 017200 301 AAGVDVMTFG 310 (375)
Q Consensus 301 elgvd~v~i~ 310 (375)
+.|+|.|.++
T Consensus 315 ~aGad~I~vg 324 (514)
T 1jcn_A 315 DAGVDGLRVG 324 (514)
T ss_dssp HHTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 8999999774
No 410
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=23.09 E-value=2.2e+02 Score=25.07 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCC---CCccc-----HHHHHHHHHHHHHhCCCcE
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDD---LADQG-----SGHFAQTVRKLKELKPNML 210 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~d---l~d~G-----~~~~~~lir~Ik~~~p~i~ 210 (375)
.+.++++++.|++.|.||-=+... .++.+ ...+.+.++++++.+.++.
T Consensus 19 ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~ 74 (267)
T 2yxo_A 19 EAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLY 74 (267)
T ss_dssp HHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCc
Confidence 355666779999999999643222 11111 3445566666766543443
No 411
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=23.04 E-value=2.5e+02 Score=21.39 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=27.5
Q ss_pred HHHHHHHHH--hCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKE--LKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~--~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++ ..|.+.|-+++... +.+.+....++|++.|
T Consensus 67 ~~~~~~lr~~~~~~~~pii~~s~~~--~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 67 FEVMSAVRKPGANQHTPIVILTDNV--SDDRAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHHSSSTTTTCCEEEEETTC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcccccCCCEEEEeCCC--CHHHHHHHHHcCCCEE
Confidence 567788877 55777776666654 6677777888887754
No 412
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=22.95 E-value=3.3e+02 Score=22.67 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~ 269 (375)
.++++.|++..|.+.|-+++..- +.+.+....++|++.|= . ...+.++.++.++.+.+
T Consensus 59 ~~~~~~lr~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~l-------------~-Kp~~~~~L~~~i~~~~~ 116 (220)
T 1p2f_A 59 YEICRMIKETRPETWVILLTLLS--DDESVLKGFEAGADDYV-------------T-KPFNPEILLARVKRFLE 116 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCC--SHHHHHHHHHHTCSEEE-------------E-SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCC--CHHHHHHHHHcCCCEEE-------------E-CCCCHHHHHHHHHHHHc
Confidence 46788888877888777776643 56667777788876542 2 34566666666666655
No 413
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=22.93 E-value=3.8e+02 Score=23.58 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=73.8
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHHhCCCcEEEeecCCC-CCChHHHHHHHHcCcccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF-RGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~----~~~~lir~Ik~~~p~i~Ie~l~pd~-~g~~e~l~~L~~aGldv~~h 238 (375)
+.++++.+.| .+|-.=|-.++++.....+ .+....+.|++.. +.....+-|.+ .-+...++.+++.|...+.-
T Consensus 75 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~l~~~G~~~~~w 152 (230)
T 2y8u_A 75 GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPAL-GVAPAYMRPPYLETNELVLQVMRDLDYRVISA 152 (230)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SSCBSEECCGGGCCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCcEEECCCCCCCHHHHHHHHHcCCEEEEe
Confidence 4566777788 4665545556655432222 2333334454432 22233333322 12788899999999887766
Q ss_pred cccchHHHHHHhcCCCCCH--HHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHH-HHHHHHHHHHcCCcEEeeecC
Q 017200 239 NIETVEELQSAVRDHRANF--KQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQ-VVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 239 nlEtv~rl~~~mr~r~~s~--~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G--ET~ee-~~etl~~Lrelgvd~v~i~qY 312 (375)
++++.+-.. . .... ...++.+.... . ..| .||+.+ + .|.++ +-+.+..|++.|..++++.+.
T Consensus 153 ~~d~~Dw~~---~--~~~~ii~~~~~~~~~~~-~-~~g-----~IiL~Hd~~~~t~~~~L~~ii~~l~~~Gy~fvtl~el 220 (230)
T 2y8u_A 153 SVDTKDYEN---Q--DADAIINTSFQLFLDQL-D-AGG-----NIVLAHDIHYWTVASLAERMLQEVNARGLIATTVGDC 220 (230)
T ss_dssp SEECCGGGC---C--STTHHHHTHHHHHHHHH-H-TTC-----CEEEECTTSHHHHHTHHHHHHHHHHHTTCEEECHHHH
T ss_pred cCCCCccCC---C--CHHHHHHHHHHHHHhcc-C-CCC-----EEEEEECCCcchHHHHHHHHHHHHHHCCCEEEEhHHh
Confidence 666655110 1 1111 11122221111 1 123 477777 4 24444 456889999999999999877
Q ss_pred CC
Q 017200 313 MR 314 (375)
Q Consensus 313 l~ 314 (375)
+.
T Consensus 221 l~ 222 (230)
T 2y8u_A 221 LG 222 (230)
T ss_dssp TT
T ss_pred hC
Confidence 63
No 414
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=22.84 E-value=3.2e+02 Score=24.02 Aligned_cols=67 Identities=16% Similarity=0.439 Sum_probs=43.6
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc--Cccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLNVFAHN 239 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gldv~~hn 239 (375)
...|+++.+.|.+ |++++ ++ .+...++++.+.+..++..+..+..|+. +.+.++.+.+. ++|++=||
T Consensus 24 ~aia~~l~~~G~~-V~~~~--r~------~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~g~id~lv~n 92 (267)
T 3t4x_A 24 KAIATSLVAEGAN-VLING--RR------EENVNETIKEIRAQYPDAILQPVVADLG-TEQGCQDVIEKYPKVDILINN 92 (267)
T ss_dssp HHHHHHHHHTTCE-EEEEE--SS------HHHHHHHHHHHHHHCTTCEEEEEECCTT-SHHHHHHHHHHCCCCSEEEEC
T ss_pred HHHHHHHHHCCCE-EEEEe--CC------HHHHHHHHHHHHhhCCCceEEEEecCCC-CHHHHHHHHHhcCCCCEEEEC
Confidence 3567788888875 55553 32 2345667777877777777777777764 56666666553 57776555
No 415
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.73 E-value=2.7e+02 Score=21.54 Aligned_cols=39 Identities=15% Similarity=0.349 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+.+....++|++.|
T Consensus 66 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 104 (154)
T 2qsj_A 66 IDGLVRLKRFDPSNAVALISGET--DHELIRAALEAGADGF 104 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEC-------CHHHHHHHHTTCCBB
T ss_pred HHHHHHHHHhCCCCeEEEEeCCC--CHHHHHHHHHccCCEE
Confidence 46677777777777776666543 3456666777787654
No 416
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=22.70 E-value=2.5e+02 Score=26.24 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCC----------cccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHH
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLA----------DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA 229 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~----------d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~ 229 (375)
..++.++..|+.+|.|.=.|.-+.. |-|...-....+.|++.+|++.|+...-.+. ..+.++.+.
T Consensus 50 ~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~-~~~~~~~~~ 124 (292)
T 3h8v_A 50 VTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT-TVENFQHFM 124 (292)
T ss_dssp HHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT-SHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC-cHHHHHHHh
Confidence 3577888999999988754421111 1233334455677888899999998765552 235555554
No 417
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.53 E-value=2.4e+02 Score=20.94 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~ga~~~ 101 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHG--DVPMAVEAMKAGAVDF 101 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTT--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCC--CHHHHHHHHHhCHHHh
Confidence 35677777766777666666543 5566677777887654
No 418
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=22.52 E-value=1.1e+02 Score=30.27 Aligned_cols=152 Identities=14% Similarity=0.220 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHH-HHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCC--CCCChHHHHHHHHcC
Q 017200 156 PPDPDEPTNVAEA-IASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD--FRGNNGCVREVAKSG 232 (375)
Q Consensus 156 ~ld~eEi~~~a~a-l~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd--~~g~~e~l~~L~~aG 232 (375)
.++++|.++.+++ +.+.++-. ..-| ++....+.+..+-+.+. .| +.| .+| +..+.+.++.+.+.+
T Consensus 262 ~~t~~eai~~~~~ll~~y~i~~-----IEdP-l~~dD~eg~~~L~~~~~--~p-I~i---vGDel~vt~~~~~~~~i~~~ 329 (428)
T 3tqp_A 262 QLTSEEMIDRLTEWTKKYPVIS-----IEDG-LSENDWAGWKLLTERLE--NK-VQL---VGDDIFVTNPDILEKGIKKN 329 (428)
T ss_dssp CBCHHHHHHHHHHHHHHSCEEE-----EECC-SCTTCHHHHHHHHHHHT--TT-SEE---EESTTTTTCHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHhhcccce-----EeCC-CCcccHHHHHHHHHhcC--CC-cce---eccccccCCHHHHHHHHHhC
Confidence 4788999999987 67766433 3322 22111333444333331 12 332 233 223667777776655
Q ss_pred -cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEee
Q 017200 233 -LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 233 -ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl--GET~ee~~etl~~Lrelgvd~v~i 309 (375)
+|++.. ++. +-.+..+.+++.+.|+. .|+. +|+|+ |||+..++..|. -.++..+|..
T Consensus 330 a~d~i~i----------Kv~-~iGGiTealkia~lA~~---~G~~----~~v~H~sGEted~~iadLa--Va~~~~~ik~ 389 (428)
T 3tqp_A 330 IANAILV----------KLN-QIGTLTETLATVGLAKS---NKYG----VIISHRSGETEDTTIADLA--VATDARQIKT 389 (428)
T ss_dssp CCSEEEE----------CHH-HHCCHHHHHHHHHHHHH---TTCE----EEEECCSBCCSCCHHHHHH--HHTTCEEEEC
T ss_pred CCCEEEe----------ccc-ccCCHHHHHHHHHHHHH---cCCe----EEEeCCCCCchHHHHHHHH--HHcCCCcccC
Confidence 344432 122 23468899999999999 5653 57777 999988876553 3455555555
Q ss_pred ecCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 310 ~qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
| -|.. .+ .-.++++|..+..++|-.....|
T Consensus 390 G---~p~r-----~e--r~akyn~llriee~l~~~~~~~~ 419 (428)
T 3tqp_A 390 G---SLCR-----SD--RVAKYNRLLQIERELNDQAPYAG 419 (428)
T ss_dssp C---CSSS-----HH--HHHHHHHHHHHHHHHTTSSCBCG
T ss_pred C---CCcc-----hh--HHHHHhHHHHHHHHhCcccEecC
Confidence 4 1210 01 12357788888889886555555
No 419
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.44 E-value=4.5e+02 Score=24.01 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=66.2
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCc-EEEeecCCCCCChHHHHHHHHcCccccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNM-LIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i-~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlE 241 (375)
.+.++.+++.|++-+++ +|++. +...++++.+++.. + .|.++.|.. +.+.++.+...+...+ ..+
T Consensus 109 ~~f~~~~~~aG~dGviv-----~Dl~~---ee~~~~~~~~~~~g--l~~i~liap~s--~~eri~~ia~~~~gfi-y~v- 174 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVIL-----PDLPP---DEDPGLVRLAQEIG--LETVFLLAPTS--TDARIATVVRHATGFV-YAV- 174 (271)
T ss_dssp HHHHHHHHHHTCCEEEC-----TTCCG---GGCHHHHHHHHHHT--CEEECEECTTC--CHHHHHHHHTTCCSCE-EEE-
T ss_pred HHHHHHHHHcCCCEEEe-----cCCCH---HHHHHHHHHHHHcC--CceEEEeCCCC--CHHHHHHHHHhCCCCE-EEE-
Confidence 45667777889875543 46653 34556666676652 3 333444443 5677787777655433 111
Q ss_pred chHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCC-HHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGET-PDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 242 tv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET-~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
+..-++-. +......-.+.++.+++. +..-+++|+|=+ .|++.+ + .+.|.+-+|..+
T Consensus 175 s~~G~TG~---~~~~~~~~~~~v~~vr~~------~~~Pv~vGfGI~t~e~a~~-~-----~~ADgVIVGSAi 232 (271)
T 1ujp_A 175 SVTGVTGM---RERLPEEVKDLVRRIKAR------TALPVAVGFGVSGKATAAQ-A-----AVADGVVVGSAL 232 (271)
T ss_dssp CC---------------CCHHHHHHHHTT------CCSCEEEESCCCSHHHHHH-H-----TTSSEEEECHHH
T ss_pred ecCcccCC---CCCCCccHHHHHHHHHhh------cCCCEEEEcCCCCHHHHHH-h-----cCCCEEEEChHH
Confidence 21111110 011111224566777762 245689999776 777766 2 668888888554
No 420
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=22.39 E-value=92 Score=31.32 Aligned_cols=138 Identities=18% Similarity=0.244 Sum_probs=77.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCC-cEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN-MLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~-i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
+.++..+.++.+.+.|++.+++..-+.. ...+.+.++.|++.+|+ +.+- .++.. +.+..+.+.++|+|.+
T Consensus 239 ~~~~~~e~~~~l~e~gv~~l~Vd~~~g~------~~~~~~~i~~lk~~~~~~~~Vi--~G~V~-t~~~a~~l~~aGad~I 309 (503)
T 1me8_A 239 NTRDFRERVPALVEAGADVLCIDSSDGF------SEWQKITIGWIREKYGDKVKVG--AGNIV-DGEGFRYLADAGADFI 309 (503)
T ss_dssp CSSSHHHHHHHHHHHTCSEEEECCSCCC------SHHHHHHHHHHHHHHGGGSCEE--EEEEC-SHHHHHHHHHHTCSEE
T ss_pred CchhHHHHHHHHHhhhccceEEecccCc------ccchhhHHHHHHHhCCCCceEe--ecccc-CHHHHHHHHHhCCCeE
Confidence 3467777788898999998877443221 23367778888887664 4321 22211 6788999999999987
Q ss_pred cccccc-h---HHHHHHhcCCCCCHHHHHHHHHHHHHhCC-CCceEEEeEEE--ecCCCHHHHHHHHHHHHHcCCcEEee
Q 017200 237 AHNIET-V---EELQSAVRDHRANFKQSLDVLMMAKDYVP-AGTLTKTSIML--GCGETPDQVVSTMEKVRAAGVDVMTF 309 (375)
Q Consensus 237 ~hnlEt-v---~rl~~~mr~r~~s~~~~l~vl~~ak~~~p-~Gl~tkt~imv--GlGET~ee~~etl~~Lrelgvd~v~i 309 (375)
-.+++. . .+.+.-+. ..+..--.++.+.+++... .| ....+|. |+ -|..|+...| .+|.+.|-+
T Consensus 310 ~Vg~~~g~~~~~r~~~~~g--~p~~~~l~~v~~~~~~~~~~~~--~~ipvia~GGi-~~~~di~kAl----alGA~~V~i 380 (503)
T 1me8_A 310 KIGIGGGSICITREQKGIG--RGQATAVIDVVAERNKYFEETG--IYIPVCSDGGI-VYDYHMTLAL----AMGADFIML 380 (503)
T ss_dssp EECSSCSTTCCSTTTTCCC--CCHHHHHHHHHHHHHHHHHHHS--EECCEEEESCC-CSHHHHHHHH----HTTCSEEEE
T ss_pred EecccCCcCcccccccCCC--CchHHHHHHHHHHHHHHhhhcC--CCceEEEeCCC-CCHHHHHHHH----HcCCCEEEE
Confidence 444331 1 11111111 1223333344444443200 01 1223444 33 4778887776 579999888
Q ss_pred ecCC
Q 017200 310 GQYM 313 (375)
Q Consensus 310 ~qYl 313 (375)
|..+
T Consensus 381 G~~~ 384 (503)
T 1me8_A 381 GRYF 384 (503)
T ss_dssp SHHH
T ss_pred Cchh
Confidence 8554
No 421
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.37 E-value=1.2e+02 Score=27.32 Aligned_cols=78 Identities=12% Similarity=0.004 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhC-CCcEEEeecCCCCCChHHHHHHHH-cCcccccccccchHHHHHHhcC----CCCCHHHHHHHHHH
Q 017200 193 GHFAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAK-SGLNVFAHNIETVEELQSAVRD----HRANFKQSLDVLMM 266 (375)
Q Consensus 193 ~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~-aGldv~~hnlEtv~rl~~~mr~----r~~s~~~~l~vl~~ 266 (375)
..+.++++.+...+ ....|..+..+|....+..+.+.+ .|.|++=-.=-|..-+.+.+.- =..+..+.|+.|..
T Consensus 22 ~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~ 101 (225)
T 2pju_A 22 TRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAK 101 (225)
T ss_dssp HHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHH
Confidence 34666676666543 234555554544111112223223 2466541100111222221110 25677888888888
Q ss_pred HHHh
Q 017200 267 AKDY 270 (375)
Q Consensus 267 ak~~ 270 (375)
|++.
T Consensus 102 a~~~ 105 (225)
T 2pju_A 102 AGKL 105 (225)
T ss_dssp TTCT
T ss_pred HHhh
Confidence 8874
No 422
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.22 E-value=1.4e+02 Score=22.72 Aligned_cols=39 Identities=8% Similarity=0.130 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-++++.. +.+......++|++.|
T Consensus 75 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 113 (135)
T 3snk_A 75 KPGIVEARALWATVPLIAVSDEL--TSEQTRVLVRMNASDW 113 (135)
T ss_dssp STTHHHHHGGGTTCCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCC--CHHHHHHHHHcCcHhh
Confidence 35677888777777776666644 5677777888887655
No 423
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=22.08 E-value=2.3e+02 Score=23.76 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=46.1
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
...++.+.++.+...|..++.+++.+.+.-. .|.. ++.|++++... ++.+-+..+.- +.+.+.++.++|+|.+
T Consensus 128 ~~~~~~~~i~~~~~~~~~~vli~~~~~~g~~-~g~~--~~~i~~~~~~~-~~Pvia~~g~~--~~~~~~~~~~~G~~~~ 200 (237)
T 3cwo_X 128 TGILLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIASGGAG--KMEHFLEAFLAGADAA 200 (237)
T ss_dssp EEEEHHHHHHHHHHHTCSEEEEEETTTTTCC-SCCC--HHHHHHHGGGC-CSCEEEESCCC--SHHHHHHHHHHTCSEE
T ss_pred cccCHHHHHHHHhhcCCCeEEEEecCCCCcc-cccc--HHHHHHHHHhc-CCCEEecCCCC--CHHHHHHHHHcCcHHH
Confidence 3456777888888999999999985322211 1232 66777777654 33333333322 5777888878898755
No 424
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=22.00 E-value=2.7e+02 Score=25.55 Aligned_cols=126 Identities=17% Similarity=0.225 Sum_probs=64.8
Q ss_pred HHHHHHhcCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccc
Q 017200 165 VAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (375)
Q Consensus 165 ~a~al~~~G~--~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEt 242 (375)
..+.+.+.|+ ..++|-=.....+.+ ...+.+.++.+++. ++.|. +-||......+..|.+..+|.+..-
T Consensus 135 l~~~l~~~~~~~~~l~lEItE~~~~~~--~~~~~~~l~~Lr~~--G~~ia--lDDFGtG~ssl~~L~~l~~d~iKID--- 205 (294)
T 2r6o_A 135 VDRALARSGLRPDCLELEITENVMLVM--TDEVRTCLDALRAR--GVRLA--LDDFGTGYSSLSYLSQLPFHGLKID--- 205 (294)
T ss_dssp HHHHHHHHCCCGGGEEEEEEGGGGGGC--CHHHHHHHHHHHHH--TCEEE--EEEETSSCBCHHHHHHSCCCEEEEC---
T ss_pred HHHHHHHcCCCcCEEEEEEeCCchhhC--hHHHHHHHHHHHHC--CCEEE--EECCCCCchhHHHHHhCCCCEEEEC---
Confidence 3444556676 334333222221222 34577888888876 45443 3344322345777888788877652
Q ss_pred hHHHHHHhcCCCCCHHHHH-HHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 243 VEELQSAVRDHRANFKQSL-DVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 243 v~rl~~~mr~r~~s~~~~l-~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
..+...+.. .......+ .++..++. .|+.+ ++---||.+++ +.|+++|++.+= |.|+
T Consensus 206 -~sfv~~i~~-~~~~~~iv~~ii~la~~---lg~~v----vAEGVEt~~q~----~~l~~lG~d~~Q-Gy~~ 263 (294)
T 2r6o_A 206 -QSFVRKIPA-HPSETQIVTTILALARG---LGMEV----VAEGIETAQQY----AFLRDRGCEFGQ-GNLM 263 (294)
T ss_dssp -HHHHTTTTT-SHHHHHHHHHHHHHHHH---TTCEE----EECCCCSHHHH----HHHHHTTCCEEC-STTT
T ss_pred -HHHHhhhhc-ChHHHHHHHHHHHHHHH---CCCEE----EEecCCcHHHH----HHHHHcCCCEEE-cCcc
Confidence 133333331 11112222 34455666 35543 22233998775 567899999753 3444
No 425
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=21.87 E-value=5.7e+02 Score=25.00 Aligned_cols=141 Identities=16% Similarity=0.258 Sum_probs=77.9
Q ss_pred CcchHHHHH-HHHHhcCC-cEEEEEeeeCC----------CCCcc--cHHHHHHHHHHHHHhCCCcEEEeecCCCCCChH
Q 017200 158 DPDEPTNVA-EAIASWGL-DYVVITSVDRD----------DLADQ--GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNG 223 (375)
Q Consensus 158 d~eEi~~~a-~al~~~G~-~eIvLTsgdr~----------dl~d~--G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e 223 (375)
+++|.++.+ +++.+.|+ ..|.|- .|-. ++.+. -....+++++.+-+.+|-+.||=-.+. .+.+
T Consensus 216 ~~~e~l~~i~~Air~aGy~~dv~l~-vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~--dD~e 292 (417)
T 3qn3_A 216 NNTEPIDLLMTCIKKAGYENRVKIA-LDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIEDGLAE--NDFE 292 (417)
T ss_dssp SSSHHHHHHHHHHHHTTCTTTEEEE-EECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEESSSCT--TCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCceEE-EECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcceeEEecCCCc--ccHH
Confidence 456666666 78888886 344433 2211 11100 134566777764456774556532222 2677
Q ss_pred HHHHHHHc-C--cccccccc-cc-hHHHHHHhcC-----------CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--
Q 017200 224 CVREVAKS-G--LNVFAHNI-ET-VEELQSAVRD-----------HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-- 285 (375)
Q Consensus 224 ~l~~L~~a-G--ldv~~hnl-Et-v~rl~~~mr~-----------r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-- 285 (375)
.+..|.+. | +.++..-. -| ..++.+.+.. +-.+..+.+++.+.|+. .|+ .+|+|+
T Consensus 293 ~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~---~G~----~v~vsh~s 365 (417)
T 3qn3_A 293 GWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQR---NNY----KCVMSHRS 365 (417)
T ss_dssp HHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHH---TTC----EEEEECCS
T ss_pred HHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHH---cCC----eEEEeCCC
Confidence 88888764 2 22222211 12 2233333221 12467899999999998 565 467888
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 286 GETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 286 GET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
|||++.++..|.. .++..++..|
T Consensus 366 gEt~d~~iadlav--a~~~~~ik~G 388 (417)
T 3qn3_A 366 GESEDAFIADFAV--ALNTGQIKTG 388 (417)
T ss_dssp SCCSCCHHHHHHH--HTTCSEEECC
T ss_pred CCchHHHHHHHHH--HhCCCccccC
Confidence 9999988766543 3444455444
No 426
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=21.85 E-value=2.6e+02 Score=21.03 Aligned_cols=39 Identities=10% Similarity=0.038 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-++++.. +.+......++|++.|
T Consensus 68 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 106 (140)
T 2qr3_A 68 LFWLHEIKRQYRDLPVVLFTAYA--DIDLAVRGIKEGASDF 106 (140)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGG--GHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCcCCCEEEEECCC--CHHHHHHHHHcCchhe
Confidence 46777888777777776666543 4566777778887654
No 427
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=21.58 E-value=5.3e+02 Score=24.50 Aligned_cols=148 Identities=13% Similarity=0.067 Sum_probs=0.0
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC-CCcEEEeecCCCCCC------hHHHHHHHH
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRGN------NGCVREVAK 230 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~-p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (375)
++++..+.|+.+.+.|++.+-|=.+..+ .+.-.+.|++|++.. |++.|.+ |..+. .+.++.|.+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~------~~~~~e~v~avR~a~G~d~~l~v---Dan~~~~~~~a~~~~~~l~~ 219 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDS------LSISIQFVEKVREIVGDELPLML---DLAVPEDLDQTKSFLKEVSS 219 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSS------HHHHHHHHHHHHHHHCSSSCEEE---ECCCCSCHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCh------HHHHHHHHHHHHHHhCCCCEEEE---EcCCCCCHHHHHHHHHHHHh
Q ss_pred cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeee
Q 017200 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (375)
Q Consensus 231 aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~ 310 (375)
.|++.+.--+...+ ++.++.+++ .+++=+-.+|+.-...+..+.+++-.+|+|.+-
T Consensus 220 ~~i~~iEqP~~~~d----------------~~~~~~l~~--------~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 220 FNPYWIEEPVDGEN----------------ISLLTEIKN--------TFNMKVVTGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp GCCSEEECSSCTTC----------------HHHHHHHHH--------HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred cCCCeEeCCCChhh----------------HHHHHHHHh--------hCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHhhhhhhccc
Q 017200 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (375)
Q Consensus 311 qYl~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (375)
|.+-+- ..+..++..+|++.|...+.++
T Consensus 276 ----~~~~GG-------it~~~~i~~~A~~~gi~~~~~~ 303 (391)
T 2qgy_A 276 ----ISGMGG-------LIDIIEISNEASNNGIFISPHC 303 (391)
T ss_dssp ----TTTSSC-------HHHHHHHHHHHHHTTCEECCBC
T ss_pred ----cchhCC-------HHHHHHHHHHHHHCCCEEeccC
No 428
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.35 E-value=59 Score=29.83 Aligned_cols=62 Identities=23% Similarity=0.352 Sum_probs=34.9
Q ss_pred CCcEEEEEeeeCCCCCccc-HHHHHHHHHHHHH----hCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 173 GLDYVVITSVDRDDLADQG-SGHFAQTVRKLKE----LKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 173 G~~eIvLTsgdr~dl~d~G-~~~~~~lir~Ik~----~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
++++|.+-+++.. ..... ...-.+-|+++++ ..+++.|++ .+.. +.+.+..+.++|+|++--
T Consensus 156 ~vD~VlvMsV~PG-fgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V-DGGI--~~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 156 NIDRVLIMSVNPG-FGGQKFIPAMLDKAKEISKWISSTDRDILLEI-DGGV--NPYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp GCSEEEEECSCTT-C--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE-ESSC--CTTTHHHHHTTTCCEEEE
T ss_pred cCCEEEEeeecCC-CCCcccchHHHHHHHHHHHHHHhcCCCeeEEE-ECCc--CHHHHHHHHHcCCCEEEE
Confidence 4789988887632 21100 0112334444443 234566653 3333 567899999999998644
No 429
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=21.34 E-value=2.1e+02 Score=26.85 Aligned_cols=125 Identities=13% Similarity=0.054 Sum_probs=0.0
Q ss_pred CcchHHHHHHHHHhcC---CcEEEEEeeeCC-------CCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHH
Q 017200 158 DPDEPTNVAEAIASWG---LDYVVITSVDRD-------DLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (375)
Q Consensus 158 d~eEi~~~a~al~~~G---~~eIvLTsgdr~-------dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (375)
+.+.+++.|+++++.| ...+++-+.-.. .+...|.+.=+++++++++. .-+.+++--+ +.+.++.
T Consensus 32 ~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e---~Glp~~Tev~--d~~~v~~ 106 (285)
T 3sz8_A 32 SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKAR---FGVPVITDVH--EAEQAAP 106 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHH---HCCCEEEECC--SGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHh---cCCeEEEEeC--CHHHHHH
Q ss_pred HHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcE
Q 017200 228 VAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDV 306 (375)
Q Consensus 228 L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~ee~~etl~~Lrelgvd~ 306 (375)
+.+. +|++.. ++---+..+.++.+.+.... +.+|+++ - |.+|+...++.+++.|.+-
T Consensus 107 l~~~-vd~lqI---------------gA~~~~n~~LLr~va~~gkP-VilK~G~-----~~t~~ei~~ave~i~~~Gn~~ 164 (285)
T 3sz8_A 107 VAEI-ADVLQV---------------PAFLARQTDLVVAIAKAGKP-VNVKKPQ-----FMSPTQLKHVVSKCGEVGNDR 164 (285)
T ss_dssp HHTT-CSEEEE---------------CGGGTTCHHHHHHHHHTSSC-EEEECCT-----TSCGGGTHHHHHHHHHTTCCC
T ss_pred HHHh-CCEEEE---------------CccccCCHHHHHHHHccCCc-EEEeCCC-----CCCHHHHHHHHHHHHHcCCCc
Q ss_pred Eee
Q 017200 307 MTF 309 (375)
Q Consensus 307 v~i 309 (375)
|.+
T Consensus 165 i~L 167 (285)
T 3sz8_A 165 VML 167 (285)
T ss_dssp EEE
T ss_pred EEE
No 430
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=21.25 E-value=2.8e+02 Score=27.36 Aligned_cols=76 Identities=14% Similarity=0.087 Sum_probs=40.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEe-ecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGldv 235 (375)
-+++.+++.++++.+.|++.|.|---..--. ...+.++++.|++.. ++.|++ .+-|+.--......-.++|++.
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~aGa~~ 251 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVGCAT----PRQVYDLIRTLRGVV-SCDIECHFHNDTGMAIANAYCALEAGATH 251 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-SSEEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccCcCC----HHHHHHHHHHHHhhc-CCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 3567777778888888887766542111111 345777777777764 355543 2223211122223334577776
Q ss_pred cc
Q 017200 236 FA 237 (375)
Q Consensus 236 ~~ 237 (375)
+.
T Consensus 252 vd 253 (423)
T 3ivs_A 252 ID 253 (423)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 431
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=21.23 E-value=2.8e+02 Score=25.13 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=59.2
Q ss_pred CCcchHHHHHHHHHhcC----CcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCC-------CChHHH
Q 017200 157 PDPDEPTNVAEAIASWG----LDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-------GNNGCV 225 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G----~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~-------g~~e~l 225 (375)
++.+++.+..+.+.++| ++. +++|-..+ ....+.+.++++.+++..|++.+- +.|.+. -+++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~d~-v~~G~l~~---~~~~~~v~~~l~~~~~~~~~~~vv-~DPVm~~~~~~~~~~~~~~ 131 (289)
T 3pzs_A 57 MPASHLTDIVQGIADIDRLKDCDA-VLSGYIGS---PEQGSHILAAVAQVKQANPDAWYF-CDPVMGHPEKGCIVAPGVA 131 (289)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCCE-EEECCCSS---HHHHHHHHHHHHHHHHHCTTCEEE-ECCCCEETTTEECSCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCCE-EEECCCCC---HHHHHHHHHHHHHHHhhCCCCeEE-EcCccccCCCCcccCHHHH
Confidence 67788888888888763 454 56764321 112466788888888777765432 344221 033444
Q ss_pred HHHHH---cCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 017200 226 REVAK---SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (375)
Q Consensus 226 ~~L~~---aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~ 269 (375)
+.+++ ..+|++.-|.+-...++.. .-.+.++..+..+.+.+
T Consensus 132 ~~l~~~ll~~~diitpN~~E~~~L~g~---~~~~~~~~~~aa~~l~~ 175 (289)
T 3pzs_A 132 EFFCNEALPASDMIAPNLLELEQLSGE---RVENVEQAVQVARSLCA 175 (289)
T ss_dssp HHHHHTHHHHCSEECCCHHHHHHHHTS---CCCSHHHHHHHHHHHHT
T ss_pred HHHHHHhhccCCEEeCCHHHHHHHhCC---CCCCHHHHHHHHHHHHH
Confidence 44332 2467777665444444421 12345666666666666
No 432
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=21.16 E-value=69 Score=31.08 Aligned_cols=77 Identities=5% Similarity=0.044 Sum_probs=47.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-ccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv 235 (375)
.+.++..+.++.+.+.|+.+|.+.++....... +. ...+.++.|++..+ +.|- ..+.+ +.+..+.+.+.| +|.
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~-~~-~~~~~~~~vr~~~~-iPvi-~~G~i--~~~~a~~~l~~g~aD~ 326 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAWE-KI-ECTESLVPMRKAYK-GTFI-VAGGY--DREDGNRALIEDRADL 326 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC--------CCCCSHHHHHHCC-SCEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCC-cc-ccHHHHHHHHHHcC-CCEE-EeCCC--CHHHHHHHHHCCCCcE
Confidence 345677889999999999999999874321110 00 01234566777653 3222 23455 567777777776 888
Q ss_pred cccc
Q 017200 236 FAHN 239 (375)
Q Consensus 236 ~~hn 239 (375)
+..+
T Consensus 327 V~~g 330 (376)
T 1icp_A 327 VAYG 330 (376)
T ss_dssp EEES
T ss_pred Eeec
Confidence 7765
No 433
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.15 E-value=3.6e+02 Score=22.43 Aligned_cols=70 Identities=13% Similarity=0.193 Sum_probs=43.6
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv 235 (375)
.++++++ +++.+.+.+-|.|++-.... ...+.++++.|++..+ ++.| +.+... ..+..+.+.+.|+|.
T Consensus 56 ~p~e~lv---~aa~~~~~diV~lS~~~~~~-----~~~~~~~i~~L~~~g~~~i~v--~vGG~~-~~~~~~~l~~~G~d~ 124 (161)
T 2yxb_A 56 QTPEQVA---MAAVQEDVDVIGVSILNGAH-----LHLMKRLMAKLRELGADDIPV--VLGGTI-PIPDLEPLRSLGIRE 124 (161)
T ss_dssp CCHHHHH---HHHHHTTCSEEEEEESSSCH-----HHHHHHHHHHHHHTTCTTSCE--EEEECC-CHHHHHHHHHTTCCE
T ss_pred CCHHHHH---HHHHhcCCCEEEEEeechhh-----HHHHHHHHHHHHhcCCCCCEE--EEeCCC-chhcHHHHHHCCCcE
Confidence 3456554 55667889988888764432 4557888888888643 4433 222211 244566788999995
Q ss_pred -cc
Q 017200 236 -FA 237 (375)
Q Consensus 236 -~~ 237 (375)
|.
T Consensus 125 v~~ 127 (161)
T 2yxb_A 125 IFL 127 (161)
T ss_dssp EEC
T ss_pred EEC
Confidence 53
No 434
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.13 E-value=2.9e+02 Score=21.39 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcC-cccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ldv~ 236 (375)
.++++.|++..|.+.|-+++... +.+......++| ++.|
T Consensus 74 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~~ 113 (153)
T 3hv2_A 74 PTLLARIHQQYPSTTRILLTGDP--DLKLIAKAINEGEIYRY 113 (153)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCC--CHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHhHCCCCeEEEEECCC--CHHHHHHHHhCCCcceE
Confidence 46778888888888877777654 567777788888 6644
No 435
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.04 E-value=3.9e+02 Score=22.80 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=72.2
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccccccch
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV 243 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv 243 (375)
+.++.+.+.|.+.|+|-+....+ ++ ..+.++++.+++.+|+..+-.- + . +.+.+..+.++|+|.+..+.-..
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~-p~---~~~~~~i~~~~~~~~~~~v~~~-~--~-t~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQR-PK---ETLDELVSYIRTHAPNVEIMAD-I--A-TVEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCC-SS---SCHHHHHHHHHHHCTTSEEEEE-C--S-SHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHhCCCCEEEEeeecccC-cc---cCHHHHHHHHHHhCCCceEEec-C--C-CHHHHHHHHHcCCCEEEeCCCcC
Confidence 44556678899999886654321 11 1256888999988777655321 1 1 55667788899999774321100
Q ss_pred HHHHHHhcCCCC-CHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 244 EELQSAVRDHRA-NFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 244 ~rl~~~mr~r~~-s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGE-T~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
. ... +.. .....++.++.+++.. ++ -++..=|= |.+++.+.+ +.|.+.+-+|..
T Consensus 151 t----~~~-~~~~~~~~~~~~~~~~~~~~--~i----pvia~GGI~~~~~~~~~~----~~Gad~v~vG~a 206 (223)
T 1y0e_A 151 T----SYT-QGQLLYQNDFQFLKDVLQSV--DA----KVIAEGNVITPDMYKRVM----DLGVHCSVVGGA 206 (223)
T ss_dssp S----TTS-TTCCTTHHHHHHHHHHHHHC--CS----EEEEESSCCSHHHHHHHH----HTTCSEEEECHH
T ss_pred c----CCC-CCCCCCcccHHHHHHHHhhC--CC----CEEEecCCCCHHHHHHHH----HcCCCEEEEChH
Confidence 0 000 111 1233467777777742 12 23332244 777766554 469999988743
No 436
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=20.99 E-value=3.3e+02 Score=23.63 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=40.5
Q ss_pred HHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccccc
Q 017200 167 EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (375)
Q Consensus 167 ~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~h 238 (375)
.++.+.|+++|.+ .+.-.-+| .+.++.++...|++.+-. ++.. +.+.+..+.++|.+.+..
T Consensus 118 ~~A~~~Gad~v~~----fpa~~~gG----~~~lk~l~~~~~~ipvva-iGGI--~~~n~~~~l~aGa~~vav 178 (207)
T 2yw3_A 118 ERALALGLSALKF----FPAEPFQG----VRVLRAYAEVFPEVRFLP-TGGI--KEEHLPHYAALPNLLAVG 178 (207)
T ss_dssp HHHHHTTCCEEEE----TTTTTTTH----HHHHHHHHHHCTTCEEEE-BSSC--CGGGHHHHHTCSSBSCEE
T ss_pred HHHHHCCCCEEEE----ecCccccC----HHHHHHHHhhCCCCcEEE-eCCC--CHHHHHHHHhCCCcEEEE
Confidence 3445779999987 22211124 356788888887777653 3333 567899999999987765
No 437
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=20.96 E-value=1.5e+02 Score=27.45 Aligned_cols=65 Identities=18% Similarity=0.126 Sum_probs=35.9
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccH----HHHHHHHHHHHHhCCCcEEE-eecCCCCCChHHHHHHHHcC
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGS----GHFAQTVRKLKELKPNMLIE-ALVPDFRGNNGCVREVAKSG 232 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~----~~~~~lir~Ik~~~p~i~Ie-~l~pd~~g~~e~l~~L~~aG 232 (375)
+.++++.+.| .+|-.=|-.+.++..... +.+....+.|++... .... ...|.+ +.+.++.|++.|
T Consensus 111 ~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G-~~p~g~r~~~~--~~~~~~~l~~~G 180 (308)
T 3cl6_A 111 DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTG-ERPLGWYTGRT--GPNTRRLVMEEG 180 (308)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHS-SCCSEECCSSC--CTTHHHHHHHHC
T ss_pred HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHHhC-CCcceEECCCC--CHHHHHHHHHCC
Confidence 4566777888 577665655655543222 234444455555431 1111 123544 677888888888
No 438
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.93 E-value=4.1e+02 Score=23.83 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=41.0
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.+++++.+ ++.+.+.+-|.|++.....+ ..+.++++.+++..+++. ++.+...-+.+.. ...|.|.+
T Consensus 161 vp~e~l~~---~~~~~~~d~V~lS~l~~~~~-----~~~~~~i~~l~~~~~~~~--v~vGG~~~~~~~~---~~igad~~ 227 (258)
T 2i2x_B 161 VPAEEVLA---AVQKEKPIMLTGTALMTTTM-----YAFKEVNDMLLENGIKIP--FACGGGAVNQDFV---SQFALGVY 227 (258)
T ss_dssp CCSHHHHH---HHHHHCCSEEEEECCCTTTT-----THHHHHHHHHHTTTCCCC--EEEESTTCCHHHH---HTSTTEEE
T ss_pred CCHHHHHH---HHHHcCCCEEEEEeeccCCH-----HHHHHHHHHHHhcCCCCc--EEEECccCCHHHH---HHcCCeEE
Confidence 44555554 44466788888877654433 347778888887665533 3333221133322 35688877
Q ss_pred ccccc
Q 017200 237 AHNIE 241 (375)
Q Consensus 237 ~hnlE 241 (375)
.-+..
T Consensus 228 ~~da~ 232 (258)
T 2i2x_B 228 GEEAA 232 (258)
T ss_dssp CSSTT
T ss_pred ECCHH
Confidence 76643
No 439
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.93 E-value=3.3e+02 Score=23.92 Aligned_cols=66 Identities=21% Similarity=0.232 Sum_probs=38.6
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHc------Cccccc
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS------GLNVFA 237 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a------Gldv~~ 237 (375)
..|+.+.+.|.+ |++++ ++ .+...++.+.+.+..+...+..+..|+. +.+.++.+.+. ++|++=
T Consensus 23 aia~~l~~~G~~-V~~~~--r~------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv 92 (265)
T 3lf2_A 23 ATVELLLEAGAA-VAFCA--RD------GERLRAAESALRQRFPGARLFASVCDVL-DALQVRAFAEACERTLGCASILV 92 (265)
T ss_dssp HHHHHHHHTTCE-EEEEE--SC------HHHHHHHHHHHHHHSTTCCEEEEECCTT-CHHHHHHHHHHHHHHHCSCSEEE
T ss_pred HHHHHHHHCCCE-EEEEe--CC------HHHHHHHHHHHHHhcCCceEEEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEE
Confidence 567778888875 55553 22 2335566666766566555666666664 55555544432 567665
Q ss_pred cc
Q 017200 238 HN 239 (375)
Q Consensus 238 hn 239 (375)
||
T Consensus 93 nn 94 (265)
T 3lf2_A 93 NN 94 (265)
T ss_dssp EC
T ss_pred EC
Confidence 55
No 440
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=20.93 E-value=59 Score=30.27 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=23.2
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCC
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRD 185 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~ 185 (375)
+.+++.+.++.+.+.|.+.|+||||...
T Consensus 163 ~~~~~~~aa~~L~~~G~~~Vvvt~g~~g 190 (300)
T 3zs7_A 163 DLSSAILAADWFHNCGVAHVIIKSFREQ 190 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEEEC--
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcCC
Confidence 4578888899999999999999999754
No 441
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.88 E-value=2.7e+02 Score=20.92 Aligned_cols=39 Identities=13% Similarity=0.272 Sum_probs=26.2
Q ss_pred HHHHHHHHH--hCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKE--LKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~--~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++ ..|.+.|-+++... +.+......++|++.|
T Consensus 70 ~~~~~~l~~~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 110 (143)
T 3cnb_A 70 FSICHRIKSTPATANIIVIAMTGAL--TDDNVSRIVALGAETC 110 (143)
T ss_dssp HHHHHHHHTSTTTTTSEEEEEESSC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCccccCCcEEEEeCCC--CHHHHHHHHhcCCcEE
Confidence 467777877 45777776666544 5566677778887654
No 442
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=20.77 E-value=4.4e+02 Score=23.33 Aligned_cols=66 Identities=15% Similarity=0.198 Sum_probs=42.9
Q ss_pred HHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCC
Q 017200 226 REVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGV 304 (375)
Q Consensus 226 ~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlG-ET~ee~~etl~~Lrelgv 304 (375)
+...++|+|.+..+. ..+ ++.++.+++..+ +++.. .=|.+ ++.+++++.+..+.+.|+
T Consensus 173 ~~a~~~Gad~i~~~~-------------~~~----~~~l~~i~~~~~--ipvva--~GGi~~~~~~~~~~~~~~~~~~Ga 231 (273)
T 2qjg_A 173 RLGAELGADIVKTSY-------------TGD----IDSFRDVVKGCP--APVVV--AGGPKTNTDEEFLQMIKDAMEAGA 231 (273)
T ss_dssp HHHHHTTCSEEEECC-------------CSS----HHHHHHHHHHCS--SCEEE--ECCSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEECC-------------CCC----HHHHHHHHHhCC--CCEEE--EeCCCCCCHHHHHHHHHHHHHcCC
Confidence 666788999776541 122 455556655432 33332 22454 359999999999999999
Q ss_pred cEEeeecC
Q 017200 305 DVMTFGQY 312 (375)
Q Consensus 305 d~v~i~qY 312 (375)
+.+.++..
T Consensus 232 ~gv~vg~~ 239 (273)
T 2qjg_A 232 AGVAVGRN 239 (273)
T ss_dssp SEEECCHH
T ss_pred cEEEeeHH
Confidence 99888744
No 443
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=20.73 E-value=4.8e+02 Score=23.71 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=0.0
Q ss_pred HHHHHhcCCcEEEEEe-ee-----CCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCC--hHHHHHHHHcCccccc
Q 017200 166 AEAIASWGLDYVVITS-VD-----RDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN--NGCVREVAKSGLNVFA 237 (375)
Q Consensus 166 a~al~~~G~~eIvLTs-gd-----r~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~--~e~l~~L~~aGldv~~ 237 (375)
|+.+.+.|++-|.++| +. .+|...-..+.++..++.|.+..+ +.|-+=.|.-.++ .+.+..+.++|++.+.
T Consensus 33 A~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~-~pviaD~~~Gyg~~~~~~~~~l~~aGa~gv~ 111 (255)
T 2qiw_A 33 AGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVS-IPVSVDVESGYGLSPADLIAQILEAGAVGIN 111 (255)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCS-SCEEEECTTCTTCCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCC-CCEEeccCCCcCcHHHHHHHHHHHcCCcEEE
Q ss_pred ccccchH-HHHHHhcCCCCCHHHHHHHHHHHHHhCCC----CceEEEeEEEecCCC-----------HHHHHHHHHHHHH
Q 017200 238 HNIETVE-ELQSAVRDHRANFKQSLDVLMMAKDYVPA----GTLTKTSIMLGCGET-----------PDQVVSTMEKVRA 301 (375)
Q Consensus 238 hnlEtv~-rl~~~mr~r~~s~~~~l~vl~~ak~~~p~----Gl~tkt~imvGlGET-----------~ee~~etl~~Lre 301 (375)
. + .....=+ .-.+.++..+.++.+++ . |+.+ ++.|-.+. .++.++-.+.+.+
T Consensus 112 i-----Ed~~~~~~k-~l~~~~e~~~~I~a~~~---a~~~~g~~~---~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~e 179 (255)
T 2qiw_A 112 V-----EDVVHSEGK-RVREAQEHADYIAAARQ---AADVAGVDV---VINGRTDAVKLGADVFEDPMVEAIKRIKLMEQ 179 (255)
T ss_dssp E-----CSEEGGGTT-EECCHHHHHHHHHHHHH---HHHHHTCCC---EEEEEECHHHHCTTTSSSHHHHHHHHHHHHHH
T ss_pred E-----CCCCCCCCC-cccCHHHHHHHHHHHHH---HHHhcCCCe---EEEEEechhhccCCcchHHHHHHHHHHHHHHH
Q ss_pred cCCcEEee
Q 017200 302 AGVDVMTF 309 (375)
Q Consensus 302 lgvd~v~i 309 (375)
.|.|.|-+
T Consensus 180 AGAd~i~~ 187 (255)
T 2qiw_A 180 AGARSVYP 187 (255)
T ss_dssp HTCSEEEE
T ss_pred cCCcEEEE
No 444
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.72 E-value=1.5e+02 Score=26.38 Aligned_cols=141 Identities=10% Similarity=0.068 Sum_probs=73.1
Q ss_pred cchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhC--CCcEEEeecCCCCCChHHHHHH-HHcCccc
Q 017200 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDFRGNNGCVREV-AKSGLNV 235 (375)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~--p~i~Ie~l~pd~~g~~e~l~~L-~~aGldv 235 (375)
.+.+.+.++.+..+|++.|++.+|..+.-.+...+.+++.++.+.+.. -++.+. +.+.. .+.+.+..+ .+.+.+.
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~-lE~~~-~~~~~~~~l~~~~~~~~ 178 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVH-LETGQ-ESADHLLEFIEDVNRPN 178 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEE-EECCS-SCHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEE-EecCC-CCHHHHHHHHHhcCCCC
Confidence 466777788888999999999766432212223455666666654322 245442 22322 244444444 4445445
Q ss_pred ccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE-------------EEecCCCHHHHHHHHHHHHHc
Q 017200 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI-------------MLGCGETPDQVVSTMEKVRAA 302 (375)
Q Consensus 236 ~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~i-------------mvGlGET~ee~~etl~~Lrel 302 (375)
+...+++..-.. . .+.+..++++ .+...... +.++-.. .+-+|+=.-++.+.++.|++.
T Consensus 179 ~g~~~D~~h~~~---~-g~~d~~~~l~---~~~~~i~~-vHl~D~~~~~~~~~g~~~~~~~~~G~G~id~~~~~~~L~~~ 250 (290)
T 3tva_A 179 LGINFDPANMIL---Y-GTGNPIEALR---KVARYVRS-IHCKDALWAPVNERGKSWGQEVALGTGDVGMEAYLTTLWEI 250 (290)
T ss_dssp EEEEECHHHHHH---T-TCSCHHHHHH---HHGGGEEE-EEECEEECCCGGGBTTBCCEEESTTSSSSCHHHHHHHHHHT
T ss_pred EEEEeccHHHHH---h-CCCCHHHHHH---HHHhhheE-EEeccccCCCccccccccccccCCCCceeCHHHHHHHHHHc
Confidence 555556544211 1 1245544443 33333222 3333221 111244445677888889999
Q ss_pred CCc-EEee
Q 017200 303 GVD-VMTF 309 (375)
Q Consensus 303 gvd-~v~i 309 (375)
|.+ .+.+
T Consensus 251 gy~g~~~l 258 (290)
T 3tva_A 251 GYRGPLTI 258 (290)
T ss_dssp TCCSCEEE
T ss_pred CCCCcEEE
Confidence 887 4555
No 445
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=20.71 E-value=57 Score=32.28 Aligned_cols=52 Identities=17% Similarity=0.300 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhC----CC----CceEEEeEEEe--cCCCHHHHHHHHHHHHH-cCCcEEeeec
Q 017200 260 SLDVLMMAKDYV----PA----GTLTKTSIMLG--CGETPDQVVSTMEKVRA-AGVDVMTFGQ 311 (375)
Q Consensus 260 ~l~vl~~ak~~~----p~----Gl~tkt~imvG--lGET~ee~~etl~~Lre-lgvd~v~i~q 311 (375)
-+++++.+++.. |. |+++...=... .|-+.+|.++.++.|.+ .|+|+|++..
T Consensus 224 ~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~ 286 (419)
T 3l5a_A 224 CLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIAS 286 (419)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECC
T ss_pred HHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEee
Confidence 356777777754 22 23333221221 15589999999999999 9999999863
No 446
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.65 E-value=2.7e+02 Score=20.75 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=24.6
Q ss_pred HHHHHHHHHhC--CCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELK--PNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~--p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++.. +.+.|-+++... +.+......++|++.|
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 111 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSI--NEDDIFHSYDLHVNCY 111 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCcccccccEEEEecCC--cHHHHHHHHHhchhhe
Confidence 46677777654 556565565543 5566677777887654
No 447
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=20.65 E-value=1.5e+02 Score=28.84 Aligned_cols=133 Identities=19% Similarity=0.294 Sum_probs=71.8
Q ss_pred HHHHHHHhcCCcEEEEEeeeCCCC-------------CcccHHHH-HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHH
Q 017200 164 NVAEAIASWGLDYVVITSVDRDDL-------------ADQGSGHF-AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA 229 (375)
Q Consensus 164 ~~a~al~~~G~~eIvLTsgdr~dl-------------~d~G~~~~-~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~ 229 (375)
...+.+.++|++++-||=-....+ .++|...| .++|+++.+. ++.|.+..-. .....+.+.
T Consensus 135 ~~L~~~y~lGvR~~~Lthn~~N~~a~~~~~~~~~~~~~~~GLT~~G~~vV~emnrl--GmivDlSH~s---~~~~~dvl~ 209 (369)
T 1itu_A 135 GVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRL--GVLIDLAHVS---VATMKATLQ 209 (369)
T ss_dssp HHHHHHHHTTEEEEESCSSSCCSSBCBGGGGGTSSCCSSSSBCHHHHHHHHHHHHH--TCEEECTTBC---HHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeecccCCcccccccccCCCCcccCCCcCHhHHHHHHHHHHc--CCEEEcCCCC---HHHHHHHHH
Confidence 567788999999999983211111 12344334 4577777665 5777765432 222233333
Q ss_pred HcC-cccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C----CCHHHHHHHHHHHHHc-
Q 017200 230 KSG-LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G----ETPDQVVSTMEKVRAA- 302 (375)
Q Consensus 230 ~aG-ldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G----ET~ee~~etl~~Lrel- 302 (375)
-+. +=++.|. .+..+.+. +|..+ + +.|+.+.+. .|+ +..++.-+| + -|.++++++++.+.++
T Consensus 210 ~s~~PviaSHS--n~ral~~h--~RNl~-D---e~l~~la~~--GGv-igv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~ 278 (369)
T 1itu_A 210 LSRAPVIFSHS--SAYSVCAS--RRNVP-D---DVLRLVKQT--DSL-VMVNFYNNYISCTNKANLSQVADHLDHIKEVA 278 (369)
T ss_dssp HCSSCCEESSC--CBTTTSCC--TTSBC-H---HHHHHHHHH--TCE-EEECCCHHHHTSSSCCBHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEeCC--ChhhcCCC--CCCCC-H---HHHHHHHHc--CCe-EEEEechhhcCCCCCCCHHHHHHHHHHHHHhh
Confidence 232 3345563 11122221 23333 2 344455553 343 333333333 2 3899999999998875
Q ss_pred CCcEEeeecC
Q 017200 303 GVDVMTFGQY 312 (375)
Q Consensus 303 gvd~v~i~qY 312 (375)
|++.|.||.=
T Consensus 279 G~dhVgiGsD 288 (369)
T 1itu_A 279 GARAVGFGGD 288 (369)
T ss_dssp CGGGEEECCC
T ss_pred CCCeEEECCC
Confidence 8898888743
No 448
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=20.63 E-value=5.9e+02 Score=24.72 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C---------C----CHHHHH----HHHHHHHHcCCcEEeeecCCC
Q 017200 253 HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G---------E----TPDQVV----STMEKVRAAGVDVMTFGQYMR 314 (375)
Q Consensus 253 r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGl-G---------E----T~ee~~----etl~~Lrelgvd~v~i~qYl~ 314 (375)
++.+.+++.++++.+.++.|..+ ...-+... | + ++++.. ...+.|.+.|...+.+..|.+
T Consensus 215 Pget~e~~~~tl~~~~~l~~~~i--~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~yeis~fa~ 292 (457)
T 1olt_A 215 PKQTPESFAFTLKRVAELNPDRL--SVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFAR 292 (457)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSEE--EEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEETTEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCcCEE--EeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEechhcC
Confidence 47789999999999999877643 32222211 1 1 344443 345677788888888877766
Q ss_pred CC
Q 017200 315 PS 316 (375)
Q Consensus 315 P~ 316 (375)
|+
T Consensus 293 ~~ 294 (457)
T 1olt_A 293 PD 294 (457)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 449
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=20.50 E-value=3.1e+02 Score=26.07 Aligned_cols=128 Identities=20% Similarity=0.283 Sum_probs=71.5
Q ss_pred HHHHHHHHhc--CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc---c
Q 017200 163 TNVAEAIASW--GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF---A 237 (375)
Q Consensus 163 ~~~a~al~~~--G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~---~ 237 (375)
.+.++++.+. |++-+.+..-.. + ...+.+.|+.|++..|++.|-+ +.. .+.+..+.+.++|+|.+ .
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g----~--~~~~~~~i~~lr~~~~~~~vi~--g~v-~t~e~A~~a~~aGaD~I~v~~ 190 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANG----Y--SEHFVEFVKDVRKRFPQHTIMA--GNV-VTGEMVEELILSGADIIKVGI 190 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCT----T--BHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHhccCCCCEEEEEecCC----C--cHHHHHHHHHHHHhcCCCeEEE--EeC-CCHHHHHHHHHhCCCEEEECC
Confidence 4556666665 888776653211 1 2346788999999887654421 111 16788999999999988 3
Q ss_pred cc--ccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEeeecCC
Q 017200 238 HN--IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (375)
Q Consensus 238 hn--lEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imv-GlGET~ee~~etl~~Lrelgvd~v~i~qYl 313 (375)
|. +++. +.+.-.. ..+..--.++.+.+.. .+++ +|. |=--|-.|+...| .+|.+.|-+|..+
T Consensus 191 g~G~~~~~-r~~~g~~--~p~~~~l~~v~~~~~~---~~ip----vIa~GGI~~g~di~kAl----alGA~~V~vG~~f 255 (351)
T 2c6q_A 191 GPGSVCTT-RKKTGVG--YPQLSAVMECADAAHG---LKGH----IISDGGCSCPGDVAKAF----GAGADFVMLGGML 255 (351)
T ss_dssp SCSTTBCH-HHHHCBC--CCHHHHHHHHHHHHHH---TTCE----EEEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCcCcCc-cccCCCC--ccHHHHHHHHHHHHhh---cCCc----EEEeCCCCCHHHHHHHH----HcCCCceeccHHH
Confidence 22 2322 2222211 1122222333333333 1233 333 2225788887766 5799999887554
No 450
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=20.46 E-value=89 Score=30.28 Aligned_cols=69 Identities=9% Similarity=0.105 Sum_probs=49.3
Q ss_pred EeEEEec----CCCHHHHHHHHHHHHHcCCcEEeeecCCCCC----CCC--CCcc----c--------cCCHHHHHHHHH
Q 017200 279 TSIMLGC----GETPDQVVSTMEKVRAAGVDVMTFGQYMRPS----KRH--MPVS----E--------YITPEAFERYRA 336 (375)
Q Consensus 279 t~imvGl----GET~ee~~etl~~Lrelgvd~v~i~qYl~P~----~~~--~~v~----~--------~v~pe~~~~l~~ 336 (375)
.-||.|. .|+.|...++++..++.|.|.|-+..| .|. ... .+.. . ....+.++.|.+
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~-k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~ 98 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTH-IVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKE 98 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEEC-CHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeec-ccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHH
Confidence 4567655 579999999999999999999999433 341 111 1100 0 145688999999
Q ss_pred HHHHhhhhhhcc
Q 017200 337 LGMEMGFRYVAS 348 (375)
Q Consensus 337 ~a~~~gf~~~~s 348 (375)
++.+.|..++.+
T Consensus 99 ~~~~~Gi~~~st 110 (349)
T 2wqp_A 99 YVESKGMIFIST 110 (349)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHhCCeEEEe
Confidence 999999987644
No 451
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=20.42 E-value=3.8e+02 Score=26.42 Aligned_cols=26 Identities=12% Similarity=0.136 Sum_probs=23.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeeec
Q 017200 286 GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (375)
Q Consensus 286 GET~ee~~etl~~Lrelgvd~v~i~q 311 (375)
+.+++++.+..+.+.+.|+|.|.+.+
T Consensus 279 d~~~~~i~~iA~~a~~aGaDgIiv~N 304 (415)
T 3i65_A 279 DLNQEQKKEIADVLLETNIDGMIISN 304 (415)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 67899999999999999999998864
No 452
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=20.36 E-value=3e+02 Score=21.13 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=20.3
Q ss_pred HHHHHHHHHhCCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 196 ~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
.++++.|++..|.+.|-++++.- +.+......++|++.|
T Consensus 65 ~~l~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~ 103 (141)
T 3cu5_A 65 IELVDNILKLYPDCSVIFMSGYS--DKEYLKAAIKFRAIRY 103 (141)
T ss_dssp HHHHHHHHHHCTTCEEEEECCST--TTCCC------CCCEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCC--cHHHHHHHHhCCccEE
Confidence 36777787777887776666532 2333445556676544
No 453
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=20.31 E-value=1.5e+02 Score=27.92 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=61.3
Q ss_pred ChHHHHHHHHcCcccccccccchHH-HHHHhc--C--CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHH
Q 017200 221 NNGCVREVAKSGLNVFAHNIETVEE-LQSAVR--D--HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVST 295 (375)
Q Consensus 221 ~~e~l~~L~~aGldv~~hnlEtv~r-l~~~mr--~--r~~s~~~~l~vl~~ak~~~p~Gl~tkt~imvGlGET~ee~~et 295 (375)
|.-....+.++|.|.+-.+ +. +-..+. | ...++++.+..++.+.+..+ +++-.++=.|+|.+.+++.++
T Consensus 26 D~~sA~~~~~aG~~ai~vs----~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d~Gyg~~~~~~~~~ 99 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLS----GGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS--LPLLVDADIGFGSSAFNVART 99 (295)
T ss_dssp SHHHHHHHHHTTCSCEEEC----HHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC--SCEEEECTTCSSSSHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEC----chHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC--CCEEecCCcccCCCHHHHHHH
Confidence 4455666777888866432 11 111011 1 24789999999999988653 568888888899999999999
Q ss_pred HHHHHHcCCcEEeee
Q 017200 296 MEKVRAAGVDVMTFG 310 (375)
Q Consensus 296 l~~Lrelgvd~v~i~ 310 (375)
...+.+.|++.|+|=
T Consensus 100 v~~l~~aGa~gv~iE 114 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIE 114 (295)
T ss_dssp HHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCeEEEEC
Confidence 999999999999983
No 454
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=20.11 E-value=2.1e+02 Score=30.57 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=43.6
Q ss_pred HHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCC-CcEEEeecCCCCCChHHHHHHHHcCccccccc
Q 017200 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (375)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hn 239 (375)
.+.++++.+.+.+-|+|++-+... ...+.++++.|++..+ ++.| +.+... -.+..+.+.+.|+|.+-+.
T Consensus 637 eeiv~aA~e~~adiVglSsl~~~~-----~~~~~~vi~~L~~~G~~~i~V--ivGG~~-p~~d~~~l~~~GaD~~f~~ 706 (727)
T 1req_A 637 EETARQAVEADVHVVGVSSLAGGH-----LTLVPALRKELDKLGRPDILI--TVGGVI-PEQDFDELRKDGAVEIYTP 706 (727)
T ss_dssp HHHHHHHHHTTCSEEEEEECSSCH-----HHHHHHHHHHHHHTTCTTSEE--EEEESC-CGGGHHHHHHTTEEEEECT
T ss_pred HHHHHHHHHcCCCEEEEeeecHhH-----HHHHHHHHHHHHhcCCCCCEE--EEcCCC-ccccHHHHHhCCCCEEEcC
Confidence 344566678899999988864321 4457888889988654 3333 333211 1223566889999987663
No 455
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=20.08 E-value=3.3e+02 Score=24.18 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=40.5
Q ss_pred CCcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCC-CChHH----HHHHHHc
Q 017200 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-GNNGC----VREVAKS 231 (375)
Q Consensus 157 ld~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~-g~~e~----l~~L~~a 231 (375)
++++++.+.++.+.+.|+++|.+. - + .|. +.++++++.. .+.|-+. +... .+.+. +..+.++
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~-~-----~-~~~----~~l~~i~~~~-~ipvva~-GGi~~~~~~~~~~~~~~~~~~ 229 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTS-Y-----T-GDI----DSFRDVVKGC-PAPVVVA-GGPKTNTDEEFLQMIKDAMEA 229 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEC-C-----C-SSH----HHHHHHHHHC-SSCEEEE-CCSCCSSHHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHcCCCEEEEC-C-----C-CCH----HHHHHHHHhC-CCCEEEE-eCCCCCCHHHHHHHHHHHHHc
Confidence 456777777788889999977653 1 1 223 4555665544 2444332 2221 12333 6666789
Q ss_pred Cccccccc
Q 017200 232 GLNVFAHN 239 (375)
Q Consensus 232 Gldv~~hn 239 (375)
|++.+..+
T Consensus 230 Ga~gv~vg 237 (273)
T 2qjg_A 230 GAAGVAVG 237 (273)
T ss_dssp TCSEEECC
T ss_pred CCcEEEee
Confidence 98876653
No 456
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=20.07 E-value=1.3e+02 Score=29.12 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeecCC-CCCCCCCCccc-------cCCHHHHHHHHHHHHHhhhhhh
Q 017200 288 TPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVSE-------YITPEAFERYRALGMEMGFRYV 346 (375)
Q Consensus 288 T~ee~~etl~~Lrelgvd~v~i~qYl-~P~~~~~~v~~-------~v~pe~~~~l~~~a~~~gf~~~ 346 (375)
+...+.+.|+.|+++|++.|-+.+.+ .|...+-.+.. +=+.+.|+.|-+-|.++|...+
T Consensus 21 d~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vi 87 (441)
T 1lwj_A 21 DFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVV 87 (441)
T ss_dssp CHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 88899999999999999998776443 22222222222 2367899999999999998766
No 457
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=20.04 E-value=2.4e+02 Score=25.56 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=47.6
Q ss_pred CcchHHHHHHHHHhcCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHHh-CCCcEEEeecCCCCCChHHHHHHHHcCcccc
Q 017200 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (375)
Q Consensus 158 d~eEi~~~a~al~~~G~~eIvLTsgdr~dl~d~G~~~~~~lir~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGldv~ 236 (375)
+.+|+.+.++...+.|.++|--..|-.+ .+|+. .+-++.+++. -+.+.|.+.-+-- +.+....+.++|.+++
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~~---~~gAt--~edv~lm~~~v~~~v~VKaaGGIr--t~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFHP---SGGAS--VQAVEIMARTVGERLGVKASGGIR--TAEQAAAMLDAGATRL 216 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCCT---TCSCC--HHHHHHHHHHHTTTSEEEEESSCC--SHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCCC---CCCCC--HHHHHHHHHHhCCCceEEEeCCCC--CHHHHHHHHHhcchhc
Confidence 7899999999999999999986554321 12221 1223333332 2567787664422 6678888889999977
Q ss_pred c
Q 017200 237 A 237 (375)
Q Consensus 237 ~ 237 (375)
.
T Consensus 217 G 217 (231)
T 3ndo_A 217 G 217 (231)
T ss_dssp E
T ss_pred c
Confidence 5
No 458
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=20.04 E-value=3.3e+02 Score=25.34 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhCCC-cEEEeecCCCCCChHHHHHHHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCC
Q 017200 195 FAQTVRKLKELKPN-MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPA 273 (375)
Q Consensus 195 ~~~lir~Ik~~~p~-i~Ie~l~pd~~g~~e~l~~L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~ 273 (375)
+...++..++..|. ..|++..- +.+.+++..++|+|++-. + .-+.++..+.++.++..+|.
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~----tleea~eA~~aGaD~I~L--D------------n~~~e~l~~av~~l~~~~~~ 240 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE----NLEDALRAVEAGADIVML--D------------NLSPEEVKDISRRIKDINPN 240 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES----SHHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCCCceEEEEeC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHHhhccCCC
Confidence 45577788877765 46666543 467888888999998632 1 23445555566666553333
Q ss_pred CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEeeecC
Q 017200 274 GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (375)
Q Consensus 274 Gl~tkt~imvGlGET~ee~~etl~~Lrelgvd~v~i~qY 312 (375)
+.+-++ =|+ |. +.+..+.+.|+|++.++..
T Consensus 241 -v~ieAS--GGI--t~----eni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 241 -VIVEVS--GGI--TE----ENVSLYDFETVDVISSSRL 270 (285)
T ss_dssp -SEEEEE--ECC--CT----TTGGGGCCTTCCEEEEGGG
T ss_pred -ceEEEE--CCC--CH----HHHHHHHHcCCCEEEEeHH
Confidence 332211 133 33 2344456789999999864
No 459
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=20.01 E-value=1.6e+02 Score=27.84 Aligned_cols=125 Identities=15% Similarity=0.072 Sum_probs=0.0
Q ss_pred CcchHHHHHHHHHhcC---CcEEEEEeeeCC-------CCCcccHHHHHHHHHHHHHhCCCcEEEeecCCCCCChHHHHH
Q 017200 158 DPDEPTNVAEAIASWG---LDYVVITSVDRD-------DLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (375)
Q Consensus 158 d~eEi~~~a~al~~~G---~~eIvLTsgdr~-------dl~d~G~~~~~~lir~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (375)
+.+.+++.|+++++.| ...+++-+.-.. .+...|.+.=+++++++++. .-+.+++--+ +.+.++.
T Consensus 53 s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e---~GLpv~Tev~--D~~~v~~ 127 (298)
T 3fs2_A 53 TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKE---YGFPVLTDIH--TEEQCAA 127 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHH---HCCCEEEECC--SHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHh---cCCeEEEEeC--CHHHHHH
Q ss_pred HHHcCcccccccccchHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE-EEecCCCHHHHHHHHHHHHHcCCcE
Q 017200 228 VAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI-MLGCGETPDQVVSTMEKVRAAGVDV 306 (375)
Q Consensus 228 L~~aGldv~~hnlEtv~rl~~~mr~r~~s~~~~l~vl~~ak~~~p~Gl~tkt~i-mvGlGET~ee~~etl~~Lrelgvd~ 306 (375)
+.+. +|++.. ++---+..+.++.+.+.... +.+|+++ + |.+|+...++.+++.|.+-
T Consensus 128 l~~~-vd~lkI---------------gA~~~~n~~LLr~va~~gkP-VilK~Gms~-----t~~ei~~ave~i~~~Gn~~ 185 (298)
T 3fs2_A 128 VAPV-VDVLQI---------------PAFLCRQTDLLIAAARTGRV-VNVKKGQFL-----APWDMKNVLAKITESGNPN 185 (298)
T ss_dssp HTTT-CSEEEE---------------CGGGTTCHHHHHHHHHTTSE-EEEECCTTC-----CGGGHHHHHHHHHTTTCCC
T ss_pred HHhh-CCEEEE---------------CccccCCHHHHHHHHccCCc-EEEeCCCCC-----CHHHHHHHHHHHHHcCCCe
Q ss_pred Eee
Q 017200 307 MTF 309 (375)
Q Consensus 307 v~i 309 (375)
|.+
T Consensus 186 iiL 188 (298)
T 3fs2_A 186 VLA 188 (298)
T ss_dssp EEE
T ss_pred EEE
Done!